@genome-spy/app 0.88.0 → 0.89.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/{agentApi-BYFBKiRQ.js → agentApi-BUcXm-JC.js} +5544 -6449
- package/dist/agentApi.es.js +3328 -4255
- package/dist/agentShared.es.js +9 -9
- package/dist/{canvas2d-BVQ7-2eJ.js → canvas2d-CGuVGvQk.js} +117 -106
- package/dist/{canvas2d-D7SZK3xv.js → canvas2d-DgF0kstG.js} +99 -88
- package/dist/{canvasSizeHelper-7h_8rOcx.js → canvasSizeHelper-foL2YvGL.js} +15 -8
- package/dist/{clipOptions-DTMcB_9z.js → clipOptions-8BPf0WMZ.js} +1013 -755
- package/dist/{clipOptions-BWHr3aTa.js → clipOptions-DBJX_W31.js} +1033 -775
- package/dist/{debug-CVpoEOWx.js → debug-BEWbYuZD.js} +2 -2
- package/dist/{debug-DYAMZZKl.js → debug-DQj_7mFm.js} +2 -2
- package/dist/index.es.js +65 -65
- package/dist/index.js +406 -364
- package/dist/{indexer-DAH_ruVn.js → indexer-Cdt_U05k.js} +1 -1
- package/dist/{indexer-CXjZDo2Q.js → indexer-D8Bgkkb8.js} +1 -1
- package/dist/order-BPOzLe80.js +1056 -0
- package/dist/order-DIxlclRN.js +1056 -0
- package/dist/rasterExport-Bl6w9t3J.js +51 -0
- package/dist/rasterExport-DRvNAH-r.js +51 -0
- package/dist/rasterization-D0tOoKu_.js +62 -0
- package/dist/rectangle-DE98gIxF.js +108 -0
- package/dist/{renderCanvas2D-DxturTEW.js → renderCanvas2D-Ct95auF3.js} +60 -59
- package/dist/{renderCanvas2D-DtcJjqpB.js → renderCanvas2D-LdEYFnRo.js} +71 -70
- package/dist/schema.json +588 -116
- package/dist/{svg-CyrLfa9e.js → svg-Ag36-h_I.js} +394 -382
- package/dist/{svg-SDJMzL--.js → svg-pkTPD4bv.js} +368 -356
- package/dist/{svgRasterizer-f7DJ3UO0.js → svgRasterizer-CksK4QTB.js} +6 -5
- package/dist/{svgRasterizer-mWK7HTkx.js → svgRasterizer-DrtJ9nLk.js} +6 -5
- package/dist/{vega-scale-CypF85iS.js → vega-scale-BJaDSHBJ.js} +891 -959
- package/dist/{vega-scale-DLKCwWRs.js → vega-scale-BWBFykuI.js} +692 -760
- package/dist/{viewIdentityRegistry-DIDo44XQ.js → viewIdentityRegistry-B-snqI3y.js} +1 -1
- package/dist/{viewIdentityRegistry-Dl-vMN9I.js → viewIdentityRegistry-BvCJajXG.js} +1 -1
- package/dist/{viewSelectors-CymbZyE6.js → viewSelectors-BlvzvG-z.js} +445 -380
- package/dist/{viewSelectors-DNiDip5e.js → viewSelectors-C5q3qBiR.js} +364 -299
- package/dist/{viewUtils-BrJLIj2o.js → viewUtils-C3vBtSvE.js} +1714 -1689
- package/dist/{webgl-CqTDifWM.js → webgl-CZX2pe5v.js} +2322 -971
- package/dist/{webgl-jaC2m0Zr.js → webgl-CexXSw_I.js} +2374 -1023
- package/package.json +5 -5
- package/dist/order-C5CzA37O.js +0 -918
- package/dist/order-DvY7KNcu.js +0 -918
- package/dist/rasterExport-BgZ98e6U.js +0 -44
- package/dist/rasterExport-DEr8fOLm.js +0 -44
- package/dist/rasterization-CFogVB3B.js +0 -50
- package/dist/rectangle-DKnrAmKs.js +0 -142
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import {
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import { a as e, hn as t, m as n, o as r, s as i } from "./clipOptions-DBJX_W31.js";
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import { t as a } from "./warning-CpIIpk8e.js";
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import { n as o } from "./
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import { n as s } from "./
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import { A as c,
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import { n as o } from "./performanceProfiler-CPLEjApa.js";
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import { n as s } from "./layoutResult-D50MSHXR.js";
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import { A as c, E as l, F as u, I as d, M as f, N as p, S as m, _ as h, a as g, b as _, c as v, d as y, f as b, g as x, h as S, i as C, j as w, k as T, l as ee, m as E, p as D, s as O, t as k, u as A, v as j, w as M, x as N, y as P } from "./order-DIxlclRN.js";
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//#region ../core/src/rendering/canvas2d/renderers/arrow.js
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function F(e, t) {
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let n = e, r = t.context, i = n.encoders, a =
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let n = e, r = t.context, i = n.encoders, a = m(n);
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r.lineJoin = "miter";
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let o, s;
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return
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return M(n, a, t, (e) => {
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e.headShapeFallback && t.warn(`Canvas2D rendered unsupported arrow headShape "${a.headShape}" as a triangle.`), r.beginPath();
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for (let t of e.boundaryLoops) {
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let e = t[0];
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for (let e = 1; e < t.length; e++) r.lineTo(t[e].x, t[e].y);
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r.closePath();
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}
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let n =
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n != "none" &&
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let d =
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let n = c(i.fill(e.datum)), u = l(i.fillOpacity, e.datum) * t.viewOpacity;
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n != "none" && u > 0 && (o != n && (r.fillStyle = n, o = n), r.globalAlpha = u, r.fill());
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let d = c(i.stroke(e.datum)), f = l(i.strokeOpacity, e.datum) * t.viewOpacity;
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d != "none" && f > 0 && e.strokeWidth > 0 && (s != d && (r.strokeStyle = d, s = d), r.globalAlpha = f, r.lineWidth = e.strokeWidth, r.stroke());
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});
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}
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//#endregion
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//#region ../core/src/rendering/canvas2d/renderers/link.js
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function I(
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let r =
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function I(e, t) {
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let r = e, i = t.context, a = r.encoders, o = h(r), s = N(r, o.shape, t.secondOrderPass);
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i.lineCap = "butt";
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let
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let u;
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return j(r, o, t, (e) => {
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let r = c(a.color(e.datum)), o = l(a.opacity, e.datum) * t.viewOpacity;
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if (r == "none" || o <= 0 || e.strokeWidth <= 0) return;
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let d = s && _(e.points[0], e.points[3], s);
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let { normalX:
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i.globalAlpha = o, i.lineWidth =
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let [f, p, m,
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i.beginPath(), i.moveTo(f[0], f[1]), i.bezierCurveTo(p[0], p[1], m[0], m[1],
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let { normalX: e, normalY: t, offset: a, start: o, end: s } = d, c = i.createLinearGradient(e * (a - s), t * (a - s), e * (a + s), t * (a + s)), l = n(r), f = l.opacity;
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for (let e of P(o, s)) l.opacity = f * e.opacity, c.addColorStop(e.offset, l.formatRgb());
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i.strokeStyle = c, u = void 0;
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} else u != r && (i.strokeStyle = r, u = r);
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i.globalAlpha = o, i.lineWidth = e.strokeWidth;
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let [f, p, m, h] = e.points;
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i.beginPath(), i.moveTo(f[0], f[1]), i.bezierCurveTo(p[0], p[1], m[0], m[1], h[0], h[1]), i.stroke();
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});
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}
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//#endregion
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//#region ../core/src/rendering/canvas2d/renderers/point.js
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function L(e, t) {
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r && (f == "none" || p <= 0) && (f =
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T(n, n.properties.fillGradientStrength) && t.warn("Canvas2D ignored unsupported point property fillGradientStrength."), n.properties.geometricZoomBound && t.warn("Canvas2D ignored unsupported point property geometricZoomBound.");
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let r = S(n), i = t.context, a = n.encoders, o, s;
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return x(n, r, t, (e) => {
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let n = e.datum, r = e.lineShape, u = c(a.fill(n)), d = l(a.fillOpacity, n) * t.viewOpacity, f = c(a.stroke(n)), p = l(a.strokeOpacity, n) * t.viewOpacity;
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r && (f == "none" || p <= 0) && (f = u, p = d), i.beginPath();
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let m = e.angle != 0 && e.shape != "circle";
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m && (i.save(), i.translate(e.x, e.y), i.rotate(e.angle * Math.PI / 180));
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let h = m ? 0 : e.x, g = m ? 0 : e.y, _ = !0;
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else if (e.shape == "square") {
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let t = e.geometryRadius * 2;
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i.rect(h - e.geometryRadius, g - e.geometryRadius, t, t);
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} else _ =
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m && i.restore(), _ || (t.warn(`Canvas2D rendered unsupported point shape "${e.shape}" as a circle.`), i.arc(e.x, e.y, e.geometryRadius, 0, Math.PI * 2)), !r &&
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} else _ = E(e.shape, h, g, e.geometryRadius, i);
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m && i.restore(), _ || (t.warn(`Canvas2D rendered unsupported point shape "${e.shape}" as a circle.`), i.arc(e.x, e.y, e.geometryRadius, 0, Math.PI * 2)), !r && u != "none" && d > 0 && (o != u && (i.fillStyle = u, o = u), R(i, d), i.fill()), f != "none" && p > 0 && e.strokeWidth > 0 && (r && i.lineCap != "butt" && (i.lineCap = "butt"), s != f && (i.strokeStyle = f, s = f), R(i, p), z(i, e.strokeWidth), i.stroke());
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//#endregion
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//#region ../core/src/rendering/canvas2d/renderers/rect.js
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function B(e, t) {
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let n = e, r = b(n);
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r.hatch != "none" && t.warn("Canvas2D ignored unsupported rect hatch.");
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if (i === (t.end ?? t.data.length)) return 0;
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let a = t.context, o = n.encoders, s,
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let a = t.context, o = n.encoders, s, u, d = [
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], f = o.stroke.constant, p = o.strokeOpacity.constant, m = f ?
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return
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], f = o.stroke.constant, p = o.strokeOpacity.constant, m = f ? c(o.stroke(t.data[i])) : "none", h = f && m == "none", g = !h && p ? l(o.strokeOpacity, t.data[i]) : 0;
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return D(n, r, t, (e) => {
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r.shadow.opacity > 0 && V(e, r.shadow, t, d);
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let n = e.opacityFactor, i = e.fill != "none" && e.fillOpacity > 0, _ = f ? m :
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b && (i || y) && (d[0] = e.radii.topLeft, d[1] = e.radii.topRight, d[2] = e.radii.bottomRight, d[3] = e.radii.bottomLeft, a.beginPath(), a.roundRect(e.x, e.y, e.width, e.height, d)), i && (s != e.fill && (a.fillStyle = e.fill, s = e.fill), H(a, e.fillOpacity * n), b ? a.fill() : a.fillRect(e.x, e.y, e.width, e.height)), y && (
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let n = e.opacityFactor, i = e.fill != "none" && e.fillOpacity > 0, _ = f ? m : c(o.stroke(e.datum)), v = (p ? g : l(o.strokeOpacity, e.datum)) * t.viewOpacity * n, y = !h && _ != "none" && v > 0 && e.strokeWidth > 0, b = r.hasCornerRadii && (e.radii.topLeft != 0 || e.radii.topRight != 0 || e.radii.bottomRight != 0 || e.radii.bottomLeft != 0);
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b && (i || y) && (d[0] = e.radii.topLeft, d[1] = e.radii.topRight, d[2] = e.radii.bottomRight, d[3] = e.radii.bottomLeft, a.beginPath(), a.roundRect(e.x, e.y, e.width, e.height, d)), i && (s != e.fill && (a.fillStyle = e.fill, s = e.fill), H(a, e.fillOpacity * n), b ? a.fill() : a.fillRect(e.x, e.y, e.width, e.height)), y && (u != _ && (a.strokeStyle = _, u = _), H(a, v), U(a, e.strokeWidth), b ? a.stroke() : a.strokeRect(e.x, e.y, e.width, e.height));
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function V(e, t, n, r) {
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//#region ../core/src/rendering/canvas2d/renderers/rule.js
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function W(e, t) {
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let n = e, r = t.context, i = n.encoders;
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r.lineCap = T(n, n.properties.strokeCap), r.setLineDash(T(n, n.properties.strokeDash) ?? []), r.lineDashOffset = T(n, n.properties.strokeDashOffset);
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return y(n, A(n), t, (e) => {
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let n = c(i.color(e.datum)), o = l(i.opacity, e.datum) * t.viewOpacity;
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n == "none" || o <= 0 || e.strokeWidth <= 0 || (a != n && (r.strokeStyle = n, a = n), r.globalAlpha = o, r.lineWidth = e.strokeWidth, r.beginPath(), r.moveTo(e.x1, e.y1), r.lineTo(e.x2, e.y2), r.stroke());
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//#endregion
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let n = e, r = n.properties, i = t.textMetrics ?? n.unitView.context.textMetrics, a = i.requestFont(r), o = C(i, r), s = v(n), u = t.context, d = n.encoders, f = g(r.font), p = `${r.fontStyle ?? "normal"} ${O(r.fontWeight ?? "normal")} `, m = s.baseline == "baseline" ? "alphabetic" : s.baseline;
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].some((e) => T(n, e) > 0) && t.warn("Canvas2D ignored unsupported text viewport edge fading.");
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return s.logoLetters || (u.textAlign = s.align, u.textBaseline = m), ee(n, s, {
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...t,
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a.scale(e.logoScale.width / t, e.logoScale.heightScale), a.textAlign = "center", a.textBaseline = "alphabetic", a.fillText(e.text, 0, O("middle", 1)), a.restore();
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} else e.angle ? (a.save(), a.translate(e.x, e.y), a.rotate(e.angle * Math.PI / 180), a.fillText(e.text, e.dx, e.dy, e.width), a.restore()) : a.fillText(e.text, e.x + e.dx, e.y + e.dy, e.width);
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let n = c(d.color(e.datum)), r = l(d.opacity, e.datum) * t.viewOpacity * e.fadeOpacity;
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n == "none" || r <= 0 || (h != n && (u.fillStyle = n, h = n), u.globalAlpha = r, _ != e.size && (u.font = `${p}${e.size}px ${f}`, _ = e.size), e.logoTransform ? (u.save(), u.translate(e.x, e.y), u.rotate(e.angle * Math.PI / 180), u.translate(e.dx, e.dy), u.scale(e.logoTransform.scaleX, e.logoTransform.scaleY), u.translate(-e.logoTransform.originX, -e.logoTransform.originY), u.textAlign = "left", u.textBaseline = "alphabetic", u.fillText(e.text, 0, 0), u.restore()) : e.angle || e.scale != 1 ? (u.save(), u.translate(e.x, e.y), u.rotate(e.angle * Math.PI / 180), u.translate(e.dx, e.dy), u.scale(e.scale, e.scale), u.fillText(e.text, 0, 0), u.restore()) : u.fillText(e.text, e.x + e.dx, e.y + e.dy));
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//#endregion
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//#endregion
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//#region ../core/src/rendering/canvas2d/canvas2DViewRenderingContext.js
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var J = 8, Y = 16777216, X = class extends
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var J = 8, Y = 16777216, X = class extends s {
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#e = [];
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#t = /* @__PURE__ */ new WeakSet();
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#n = /* @__PURE__ */ new WeakMap();
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#r;
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#i;
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#a = new
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#a = new u();
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#o;
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#s = [0, 0];
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#c;
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#l;
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#u = [];
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constructor(e, t) {
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if (super(e), this.context = t.context, this.width = t.width, this.height = t.height, this.devicePixelRatio = t.devicePixelRatio, this.paint = t.paint, this.#r = t.markPredicate ?? (() => !0), this.#i =
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if (super(e), this.context = t.context, this.width = t.width, this.height = t.height, this.devicePixelRatio = t.devicePixelRatio, this.paint = t.paint, this.textMetrics = t.textMetrics, this.#r = t.markPredicate ?? (() => !0), this.#i = o(), this.#o = t.xIndexManager, this.#l = t.opacityLayers ?? [], this.#c = {
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x: 0,
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y: 0,
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width: this.context.canvas.width,
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getDevicePixelRatio() {
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return this.devicePixelRatio;
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}
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pushView(
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this.paint && !this.#t.has(
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let r =
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pushView(t, n) {
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this.paint && !this.#t.has(t) && (t.onBeforeRender(), this.#t.add(t));
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let r = t.getOpacity();
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if (this.paint && r > 0 && r !== 1) {
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let r = t
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let r = e(t), i = Z(n, this.devicePixelRatio, this.#c, r), a = Q(this.#l, this.#u.length, i.width, i.height);
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a.setTransform(this.devicePixelRatio, 0, 0, this.devicePixelRatio, -i.x, -i.y), this.#u.push({
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context: this.context,
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bounds: this.#c
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}), this.context = a, this.#c = i;
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}
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this.#e.push({
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view:
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view: t,
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coords: n,
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opacity: r
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});
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}
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renderMark(e, t) {
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if (!this.paint || !this.#r(e)) return;
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let
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if (
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let n = this.#n.get(e.unitView);
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if (n === void 0 && (n = e.unitView.getEffectiveOpacity(), this.#n.set(e.unitView, n)), n <= 0) return;
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e.initializeRenderingRevisions(Object.keys(e.properties));
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let o = t.sampleFacetRenderingOptions;
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if (o && !e.encoders.facetIndex && (this.#i?.addCount("canvasSampleFacetOccurrences"), !q(o))) {
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this.#i?.addCount("canvasCulledSampleFacetOccurrences");
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return;
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}
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let s = this.currentCoords,
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if (!
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let
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if (g.save(),
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let e =
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let s = this.currentCoords, c = r(t), l = i(c, e.properties.clip, s), u = f(this.width, this.height, l);
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|
+
if (!p(u)) return;
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+
let m = w(s, c, e.properties.cullByVisibleRange), h = this.#o?.prepare(e) ?? !1, g = this.context;
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if (g.save(), l) {
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let e = l.rect.flatten(), t = l.clipX ? e.x : 0, n = l.clipY ? e.y : 0, r = l.clipX ? e.width : this.width, i = l.clipY ? e.height : this.height;
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g.beginPath(), g.rect(t, n, r, i), g.clip();
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}
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try {
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let n = e.getOrder?.(), r = n && n.isActive();
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-
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+
d(e, t, s, this.#a, (t, i) => {
|
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let o = 0, s = i.length;
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228
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|
h && this.#o.query(i, this.#s) && (o = this.#s[0], s = this.#s[1]);
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let c = (n, r, i, o = !1) => K(e, {
|
|
@@ -234,14 +234,15 @@ var J = 8, Y = 16777216, X = class extends o {
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|
secondOrderPass: o,
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|
start: r,
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end: i,
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237
|
-
visibleBounds:
|
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238
|
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anchorCullBounds:
|
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237
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+
visibleBounds: u,
|
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238
|
+
anchorCullBounds: m,
|
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239
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|
viewOpacity: 1,
|
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240
|
+
textMetrics: this.textMetrics,
|
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|
warn: (t) => a(`${t} View: ${e.unitView.getPathString()}`)
|
|
241
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|
});
|
|
242
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|
if (!r) return c(i, o, s);
|
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243
|
-
let l = 0,
|
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244
|
-
for (let [e, t] of
|
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244
|
+
let l = 0, d = k(i, o, s, n.predicate, n.passes);
|
|
245
|
+
for (let [e, t] of d.entries()) t.length > 0 && (l += c(t, 0, t.length, e === 1));
|
|
245
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|
return l;
|
|
246
247
|
}, (t) => a(`Canvas2D could not resolve sample facet index ${t}. View: ${e.unitView.getPathString()}`));
|
|
247
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|
} finally {
|
|
@@ -249,7 +250,7 @@ var J = 8, Y = 16777216, X = class extends o {
|
|
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249
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|
}
|
|
250
251
|
}
|
|
251
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|
get currentCoords() {
|
|
252
|
-
let e =
|
|
253
|
+
let e = t(this.#e);
|
|
253
254
|
if (!e) throw Error("No current view in Canvas2D rendering context.");
|
|
254
255
|
return e.coords;
|
|
255
256
|
}
|