@genepad/app 0.6.2 → 0.6.4
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +39 -13
- package/package.json +5 -5
package/README.md
CHANGED
|
@@ -1,9 +1,32 @@
|
|
|
1
|
-
#
|
|
1
|
+
# GenePad
|
|
2
2
|
|
|
3
|
-
|
|
3
|
+
> A lightweight, cross-platform DNA sequence viewer and editor for molecular biology.
|
|
4
|
+
> Install via npm: `npm install -g @genepad/app` → run `genepad`
|
|
4
5
|
|
|
5
|
-
|
|
6
|
-
|
|
6
|
+
GenePad is a native desktop app (Tauri) for viewing and editing plasmid maps, sequences,
|
|
7
|
+
annotations, restriction sites, primers and Sanger sequencing results — in one workspace.
|
|
8
|
+
|
|
9
|
+
This npm package (`@genepad/app`) is a small **launcher**: it pulls the prebuilt native binary
|
|
10
|
+
for your platform (via an `optionalDependencies` sub-package) and exposes the `genepad` command.
|
|
11
|
+
No source code is shipped — only the compiled binary plus this launcher.
|
|
12
|
+
|
|
13
|
+
<p align="center">
|
|
14
|
+
<a href="https://genepad.cn">🌐 Homepage</a> ·
|
|
15
|
+
<a href="https://genepad.cn/changelog">Changelog</a>
|
|
16
|
+
</p>
|
|
17
|
+
|
|
18
|
+
## Screenshots
|
|
19
|
+
|
|
20
|
+
<table>
|
|
21
|
+
<tr>
|
|
22
|
+
<td width="50%" align="center"><img src="https://raw.githubusercontent.com/GenePad/GenePad.github.io/main/docs/screenshot/%E6%95%B4%E4%BD%93%E5%9B%BE%E8%B0%B1.png" alt="Plasmid overview map"/><br/><sub>Plasmid overview map</sub></td>
|
|
23
|
+
<td width="50%" align="center"><img src="https://raw.githubusercontent.com/GenePad/GenePad.github.io/main/docs/screenshot/%E5%9B%BE%E8%B0%B1%E4%B8%80%E9%94%AE%E7%9B%B4%E8%BE%BE%E5%BA%8F%E5%88%97.png" alt="Map jumps to sequence"/><br/><sub>Map jumps straight to sequence</sub></td>
|
|
24
|
+
</tr>
|
|
25
|
+
<tr>
|
|
26
|
+
<td width="50%" align="center"><img src="https://raw.githubusercontent.com/GenePad/GenePad.github.io/main/docs/screenshot/%E9%85%B6%E5%88%87%E4%BD%8D%E7%82%B9%E6%98%BE%E7%A4%BA.png" alt="Restriction sites"/><br/><sub>Restriction enzyme sites</sub></td>
|
|
27
|
+
<td width="50%" align="center"><img src="https://raw.githubusercontent.com/GenePad/GenePad.github.io/main/docs/screenshot/%E6%B5%8B%E5%BA%8F%E7%BB%93%E6%9E%9C1.png" alt="Sanger sequencing result"/><br/><sub>Sanger sequencing result</sub></td>
|
|
28
|
+
</tr>
|
|
29
|
+
</table>
|
|
7
30
|
|
|
8
31
|
## Install
|
|
9
32
|
|
|
@@ -20,23 +43,26 @@ npm automatically selects the binary matching your OS and CPU:
|
|
|
20
43
|
| Linux arm64 | `@genepad/linux-arm64` |
|
|
21
44
|
| macOS arm64 | `@genepad/darwin-arm64` |
|
|
22
45
|
|
|
23
|
-
No source code is shipped — only the compiled binary plus this small launcher.
|
|
24
|
-
|
|
25
46
|
## Usage
|
|
26
47
|
|
|
27
48
|
```bash
|
|
28
|
-
genepad
|
|
29
|
-
genepad path/to/file.dna
|
|
30
|
-
genepad --tool=enzyme-library
|
|
49
|
+
genepad # launch the GUI
|
|
50
|
+
genepad path/to/file.dna # open a file
|
|
51
|
+
genepad --tool=enzyme-library # open a specific tool window
|
|
31
52
|
```
|
|
32
53
|
|
|
33
|
-
GenePad is a GUI application
|
|
54
|
+
GenePad is a GUI application. The `genepad` command opens a window just like double-clicking the
|
|
34
55
|
native app; it is not a terminal program.
|
|
35
56
|
|
|
36
57
|
## Supported file formats
|
|
37
58
|
|
|
38
|
-
|
|
39
|
-
|
|
59
|
+
**Native formats** (full fidelity, recommended for GenePad projects):
|
|
60
|
+
|
|
61
|
+
- `.gen` — GenePad project format (SQLite database; preserves edit history and attachments).
|
|
62
|
+
- `.gjson` — GenePad JSON format (plain text, readable and diff-friendly).
|
|
63
|
+
|
|
64
|
+
Also reads / writes: GenBank (`.gb` / `.gbk`), FASTA (`.fa` / `.fasta`), SnapGene (`.dna`).
|
|
65
|
+
Read-only: AB1 chromatograms (`.ab1`).
|
|
40
66
|
|
|
41
67
|
## Notes
|
|
42
68
|
|
|
@@ -46,4 +72,4 @@ chromatograms (`.ab1`).
|
|
|
46
72
|
quarantine attribute automatically.
|
|
47
73
|
- Android is not distributed via npm — use the APK/AAB from the official site or app store.
|
|
48
74
|
|
|
49
|
-
|
|
75
|
+
Homepage: https://genepad.cn
|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@genepad/app",
|
|
3
|
-
"version": "0.6.
|
|
3
|
+
"version": "0.6.4",
|
|
4
4
|
"description": "GenePad — a DNA sequence viewer and editor. This package is a launcher that installs the prebuilt native binary for your platform.",
|
|
5
5
|
"license": "SEE LICENSE IN LICENSE",
|
|
6
6
|
"bin": {
|
|
@@ -11,10 +11,10 @@
|
|
|
11
11
|
"README.md"
|
|
12
12
|
],
|
|
13
13
|
"optionalDependencies": {
|
|
14
|
-
"@genepad/win32-x64": "0.6.
|
|
15
|
-
"@genepad/linux-x64": "0.6.
|
|
16
|
-
"@genepad/linux-arm64": "0.6.
|
|
17
|
-
"@genepad/darwin-arm64": "0.6.
|
|
14
|
+
"@genepad/win32-x64": "0.6.4",
|
|
15
|
+
"@genepad/linux-x64": "0.6.4",
|
|
16
|
+
"@genepad/linux-arm64": "0.6.4",
|
|
17
|
+
"@genepad/darwin-arm64": "0.6.4"
|
|
18
18
|
},
|
|
19
19
|
"publishConfig": {
|
|
20
20
|
"access": "public"
|