@gen3/frontend 0.10.44

package/dist/dts/features/CohortBuilder/downloads/actions/tests/downloadManifest.unit.test.js

@@ -0,0 +1,157 @@
+var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
+    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
+    return new (P || (P = Promise))(function (resolve, reject) {
+        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
+        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
+        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
+        step((generator = generator.apply(thisArg, _arguments || [])).next());
+    });
+};
+var __generator = (this && this.__generator) || function (thisArg, body) {
+    var _ = { label: 0, sent: function() { if (t[0] & 1) throw t[1]; return t[1]; }, trys: [], ops: [] }, f, y, t, g;
+    return g = { next: verb(0), "throw": verb(1), "return": verb(2) }, typeof Symbol === "function" && (g[Symbol.iterator] = function() { return this; }), g;
+    function verb(n) { return function (v) { return step([n, v]); }; }
+    function step(op) {
+        if (f) throw new TypeError("Generator is already executing.");
+        while (g && (g = 0, op[0] && (_ = 0)), _) try {
+            if (f = 1, y && (t = op[0] & 2 ? y["return"] : op[0] ? y["throw"] || ((t = y["return"]) && t.call(y), 0) : y.next) && !(t = t.call(y, op[1])).done) return t;
+            if (y = 0, t) op = [op[0] & 2, t.value];
+            switch (op[0]) {
+                case 0: case 1: t = op; break;
+                case 4: _.label++; return { value: op[1], done: false };
+                case 5: _.label++; y = op[1]; op = [0]; continue;
+                case 7: op = _.ops.pop(); _.trys.pop(); continue;
+                default:
+                    if (!(t = _.trys, t = t.length > 0 && t[t.length - 1]) && (op[0] === 6 || op[0] === 2)) { _ = 0; continue; }
+                    if (op[0] === 3 && (!t || (op[1] > t[0] && op[1] < t[3]))) { _.label = op[1]; break; }
+                    if (op[0] === 6 && _.label < t[1]) { _.label = t[1]; t = op; break; }
+                    if (t && _.label < t[2]) { _.label = t[2]; _.ops.push(op); break; }
+                    if (t[2]) _.ops.pop();
+                    _.trys.pop(); continue;
+            }
+            op = body.call(thisArg, _);
+        } catch (e) { op = [6, e]; y = 0; } finally { f = t = 0; }
+        if (op[0] & 5) throw op[1]; return { value: op[0] ? op[1] : void 0, done: true };
+    }
+};
+var __spreadArray = (this && this.__spreadArray) || function (to, from, pack) {
+    if (pack || arguments.length === 2) for (var i = 0, l = from.length, ar; i < l; i++) {
+        if (ar || !(i in from)) {
+            if (!ar) ar = Array.prototype.slice.call(from, 0, i);
+            ar[i] = from[i];
+        }
+    }
+    return to.concat(ar || Array.prototype.slice.call(from));
+};
+import { downloadToManifestAction, } from '../downloadManifest';
+import { downloadJSONDataFromGuppy, } from '@gen3/core';
+import { handleDownload } from '../utils';
+// add mock implementation for handleDownload
+jest.mock('../utils', function () { return ({
+    handleDownload: jest.fn(),
+}); });
+jest.mock('@gen3/core');
+describe('downloadToManifestAction function', function () {
+    it('should handle download to manifest action when type equals resourceIndexType', function () { return __awaiter(void 0, void 0, void 0, function () {
+        var params, done, onError, onAbort, signal;
+        return __generator(this, function (_a) {
+            switch (_a.label) {
+                case 0:
+                    params = {
+                        type: 'mockResourceIndexType',
+                        resourceIndexType: 'mockResourceIndexType',
+                        filter: {},
+                        fields: ['md5sum', 'file_name', 'file_size'],
+                        accessibility: 'public',
+                        sort: [],
+                        filename: 'test_manifest.json',
+                        referenceIdFieldInDataIndex: 'object_id',
+                        fileFields: [],
+                        resourceIdField: 'object_id',
+                    };
+                    done = jest.fn();
+                    onError = jest.fn();
+                    onAbort = jest.fn();
+                    signal = {};
+                    downloadJSONDataFromGuppy.mockReturnValue([
+                        {
+                            'object_id': 'mocked-object-id-1',
+                            'md5sum': 'mocked-md5sum-1',
+                            'file_name': 'mocked.20130502.genotypes.vcf.gz.tbi',
+                            'file_size': 8077
+                        },
+                        {
+                            'object_id': 'mocked-object-id-2',
+                            'md5sum': 'mocked-md5sum-2',
+                            'file_name': 'mocked.20130502.genotypes.vcf.gz',
+                            'file_size': 5656911
+                        },
+                        {
+                            'object_id': 'mocked-object-id-3',
+                            'md5sum': 'mocked-md5sum-3',
+                            'file_name': 'mocked_populations.tsv',
+                            'file_size': 30970
+                        },
+                        {
+                            'object_id': 'mocked-object-id-4',
+                            'md5sum': 'mocked-md5sum-4',
+                            'file_name': 'integrated_call_samples_v3.20200731.ALL.ped',
+                            'file_size': 209431
+                        }
+                    ]);
+                    return [4 /*yield*/, downloadToManifestAction(params, done, onError, onAbort, signal)];
+                case 1:
+                    _a.sent();
+                    expect(handleDownload).toHaveBeenCalled();
+                    expect(done).toHaveBeenCalled();
+                    expect(onError).not.toHaveBeenCalled();
+                    expect(downloadJSONDataFromGuppy).toHaveBeenCalledWith({
+                        onAbort: onAbort,
+                        signal: signal,
+                        parameters: {
+                            filter: params.filter,
+                            type: params.type,
+                            fields: __spreadArray([params.referenceIdFieldInDataIndex], params.fileFields, true),
+                            accessibility: params.accessibility,
+                            sort: params.sort,
+                            format: 'json',
+                        },
+                    });
+                    return [2 /*return*/];
+            }
+        });
+    }); });
+    it('should handle error when no data found for the current filters', function () { return __awaiter(void 0, void 0, void 0, function () {
+        var params, done, onError, onAbort, signal;
+        return __generator(this, function (_a) {
+            switch (_a.label) {
+                case 0:
+                    params = {
+                        type: 'mockResourceIndexType',
+                        resourceIndexType: 'mockResourceIndexType',
+                        filter: {},
+                        fields: [],
+                        accessibility: 'public',
+                        sort: [],
+                        filename: 'test_manifest.json',
+                        referenceIdFieldInDataIndex: '',
+                        fileFields: [],
+                        resourceIdField: '',
+                    };
+                    done = jest.fn();
+                    onError = jest.fn();
+                    onAbort = jest.fn();
+                    signal = {};
+                    downloadJSONDataFromGuppy.mockResolvedValue([]);
+                    return [4 /*yield*/, downloadToManifestAction(params, done, onError, onAbort, signal)];
+                case 1:
+                    _a.sent();
+                    expect(onError).toHaveBeenCalledWith(new Error('No data found for the current filters'));
+                    expect(done).not.toHaveBeenCalled();
+                    return [2 /*return*/];
+            }
+        });
+    }); });
+    // Add more tests for different use cases or edge cases
+});
+//# sourceMappingURL=downloadManifest.unit.test.js.map

package/dist/dts/features/CohortBuilder/downloads/actions/tests/downloadManifest.unit.test.js.map

@@ -0,0 +1 @@
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package/dist/dts/features/CohortBuilder/downloads/actions/utils.d.ts

@@ -0,0 +1,8 @@
+/**
+ * Handles downloading of a Blob object as a file.
+ *
+ * @param {Blob} data - The Blob object to be downloaded.
+ * @param {string} filename - The name of the file to be saved.
+ */
+export declare const handleDownload: (data: Blob, filename: string) => void;
+//# sourceMappingURL=utils.d.ts.map

package/dist/dts/features/CohortBuilder/downloads/actions/utils.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"utils.d.ts","sourceRoot":"","sources":["../../../../../../src/features/CohortBuilder/downloads/actions/utils.ts"],"names":[],"mappings":"AAIA;;;;;GAKG;AACH,eAAO,MAAM,cAAc,SAAU,IAAI,YAAY,MAAM,SAQ1D,CAAC"}

package/dist/dts/features/CohortBuilder/downloads/actions/utils.js

@@ -0,0 +1,16 @@
+/**
+ * Handles downloading of a Blob object as a file.
+ *
+ * @param {Blob} data - The Blob object to be downloaded.
+ * @param {string} filename - The name of the file to be saved.
+ */
+export var handleDownload = function (data, filename) {
+    var aElement = document.createElement('a');
+    var href = URL.createObjectURL(data);
+    aElement.setAttribute('download', filename);
+    aElement.href = href;
+    aElement.setAttribute('target', '_blank');
+    aElement.click();
+    URL.revokeObjectURL(href);
+};
+//# sourceMappingURL=utils.js.map

package/dist/dts/features/CohortBuilder/downloads/actions/utils.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"utils.js","sourceRoot":"","sources":["../../../../../../src/features/CohortBuilder/downloads/actions/utils.ts"],"names":[],"mappings":"AAIA;;;;;GAKG;AACH,MAAM,CAAC,IAAM,cAAc,GAAG,UAAC,IAAU,EAAE,QAAgB;IACzD,IAAM,QAAQ,GAAG,QAAQ,CAAC,aAAa,CAAC,GAAG,CAAC,CAAC;IAC7C,IAAM,IAAI,GAAG,GAAG,CAAC,eAAe,CAAC,IAAI,CAAC,CAAC;IACvC,QAAQ,CAAC,YAAY,CAAC,UAAU,EAAE,QAAQ,CAAC,CAAC;IAC5C,QAAQ,CAAC,IAAI,GAAG,IAAI,CAAC;IACrB,QAAQ,CAAC,YAAY,CAAC,QAAQ,EAAE,QAAQ,CAAC,CAAC;IAC1C,QAAQ,CAAC,KAAK,EAAE,CAAC;IACjB,GAAG,CAAC,eAAe,CAAC,IAAI,CAAC,CAAC;AAC5B,CAAC,CAAC"}

package/dist/dts/features/CohortBuilder/downloads/downloadActionHook.d.ts

@@ -0,0 +1,11 @@
+import { GuppyActionButtonProps } from '../types';
+interface GuppyDownloadActionHookProps extends Pick<GuppyActionButtonProps, 'Modal403' | 'Modal400' | 'done' | 'customErrorMessage' | 'hideNotification' | 'actionFunction' | 'actionArgs'> {
+    setIsActive?: (active: boolean) => void;
+}
+declare const useGuppyActionButton: ({ Modal403, Modal400, done, customErrorMessage, hideNotification, actionFunction, actionArgs, setIsActive, }: GuppyDownloadActionHookProps) => {
+    handleClick: () => Promise<void>;
+    icon: import("react/jsx-runtime").JSX.Element;
+    active: boolean;
+};
+export default useGuppyActionButton;
+//# sourceMappingURL=downloadActionHook.d.ts.map

package/dist/dts/features/CohortBuilder/downloads/downloadActionHook.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"downloadActionHook.d.ts","sourceRoot":"","sources":["../../../../../src/features/CohortBuilder/downloads/downloadActionHook.tsx"],"names":[],"mappings":"AAEA,OAAO,EAAE,sBAAsB,EAAE,MAAM,UAAU,CAAC;AAalD,UAAU,4BAA6B,SAAQ,IAAI,CACjD,sBAAsB,EACpB,UAAU,GACV,UAAU,GACV,MAAM,GACN,oBAAoB,GACpB,kBAAkB,GAClB,gBAAgB,GAChB,YAAY,CACf;IACC,WAAW,CAAC,EAAE,CAAC,MAAM,EAAE,OAAO,KAAK,IAAI,CAAC;CACzC;AAED,QAAA,MAAM,oBAAoB,iHASvB,4BAA4B;;;;CA0G9B,CAAC;AAEF,eAAe,oBAAoB,CAAC"}

package/dist/dts/features/CohortBuilder/downloads/downloadActionHook.js

@@ -0,0 +1,137 @@
+var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
+    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
+    return new (P || (P = Promise))(function (resolve, reject) {
+        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
+        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
+        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
+        step((generator = generator.apply(thisArg, _arguments || [])).next());
+    });
+};
+var __generator = (this && this.__generator) || function (thisArg, body) {
+    var _ = { label: 0, sent: function() { if (t[0] & 1) throw t[1]; return t[1]; }, trys: [], ops: [] }, f, y, t, g;
+    return g = { next: verb(0), "throw": verb(1), "return": verb(2) }, typeof Symbol === "function" && (g[Symbol.iterator] = function() { return this; }), g;
+    function verb(n) { return function (v) { return step([n, v]); }; }
+    function step(op) {
+        if (f) throw new TypeError("Generator is already executing.");
+        while (g && (g = 0, op[0] && (_ = 0)), _) try {
+            if (f = 1, y && (t = op[0] & 2 ? y["return"] : op[0] ? y["throw"] || ((t = y["return"]) && t.call(y), 0) : y.next) && !(t = t.call(y, op[1])).done) return t;
+            if (y = 0, t) op = [op[0] & 2, t.value];
+            switch (op[0]) {
+                case 0: case 1: t = op; break;
+                case 4: _.label++; return { value: op[1], done: false };
+                case 5: _.label++; y = op[1]; op = [0]; continue;
+                case 7: op = _.ops.pop(); _.trys.pop(); continue;
+                default:
+                    if (!(t = _.trys, t = t.length > 0 && t[t.length - 1]) && (op[0] === 6 || op[0] === 2)) { _ = 0; continue; }
+                    if (op[0] === 3 && (!t || (op[1] > t[0] && op[1] < t[3]))) { _.label = op[1]; break; }
+                    if (op[0] === 6 && _.label < t[1]) { _.label = t[1]; t = op; break; }
+                    if (t && _.label < t[2]) { _.label = t[2]; _.ops.push(op); break; }
+                    if (t[2]) _.ops.pop();
+                    _.trys.pop(); continue;
+            }
+            op = body.call(thisArg, _);
+        } catch (e) { op = [6, e]; y = 0; } finally { f = t = 0; }
+        if (op[0] & 5) throw op[1]; return { value: op[0] ? op[1] : void 0, done: true };
+    }
+};
+import { jsx as _jsx } from "react/jsx-runtime";
+import { useState, useCallback } from 'react';
+import { Modals, showModal, useCoreDispatch } from '@gen3/core';
+import { cleanNotifications, showNotification } from '@mantine/notifications';
+import { DownloadNotification } from '../../../utils/download';
+import { Loader } from '@mantine/core';
+import { FiDownload } from 'react-icons/fi';
+import { useDeepCompareCallback } from 'use-deep-compare';
+var showErrorMessage = function (error) {
+    showNotification({
+        message: error.message,
+    });
+};
+var useGuppyActionButton = function (_a) {
+    var _b = _a.Modal403, Modal403 = _b === void 0 ? Modals.NoAccessModal : _b, _c = _a.Modal400, Modal400 = _c === void 0 ? Modals.GeneralErrorModal : _c, done = _a.done, customErrorMessage = _a.customErrorMessage, _d = _a.hideNotification, hideNotification = _d === void 0 ? false : _d, actionFunction = _a.actionFunction, actionArgs = _a.actionArgs, _e = _a.setIsActive, setIsActive = _e === void 0 ? function (_) { return null; } : _e;
+    var _f = useState(false), active = _f[0], setActive = _f[1];
+    var dispatch = useCoreDispatch();
+    var handleError = useDeepCompareCallback(function (error) {
+        var errorMessage = error.message;
+        if (errorMessage === 'internal server error' ||
+            errorMessage === undefined) {
+            dispatch(showModal({ modal: Modal400, message: errorMessage }));
+        }
+        else if (errorMessage ===
+            'Your token is invalid or expired. Please get a new token.') {
+            dispatch(showModal({ modal: Modal403, message: errorMessage }));
+        }
+        else {
+            dispatch(showModal({
+                modal: Modal400,
+                message: customErrorMessage || errorMessage,
+            }));
+        }
+    }, [Modal400, Modal403, customErrorMessage, dispatch]);
+    var showDownloadNotification = useCallback(function (controller) {
+        showNotification({
+            message: (_jsx(DownloadNotification, { onClick: function () {
+                    controller.abort();
+                    cleanNotifications();
+                    if (done) {
+                        done();
+                    }
+                } })),
+            styles: function () { return ({
+                root: {
+                    textAlign: 'center',
+                    display: hideNotification ? 'none' : 'block',
+                },
+                closeButton: {
+                    color: 'black',
+                    '&:hover': {
+                        backgroundColor: 'lightslategray',
+                    },
+                },
+            }); },
+            closeButtonProps: { 'aria-label': 'Close notification' },
+            autoClose: false,
+        });
+    }, [done, hideNotification]);
+    var handleClick = function () { return __awaiter(void 0, void 0, void 0, function () {
+        var controller;
+        return __generator(this, function (_a) {
+            switch (_a.label) {
+                case 0:
+                    controller = new AbortController();
+                    showDownloadNotification(controller);
+                    setActive(true);
+                    setIsActive && setIsActive(true);
+                    return [4 /*yield*/, actionFunction(actionArgs, function () {
+                            setActive(false);
+                            setIsActive && setIsActive(false);
+                            // Clean up notifications...
+                            cleanNotifications();
+                        }, function (error) {
+                            handleError(error);
+                            setActive(false);
+                            setIsActive && setIsActive(false);
+                            // Clean up notifications...
+                            cleanNotifications();
+                            showErrorMessage(error);
+                        }, function () {
+                            setActive(false);
+                            setIsActive && setIsActive(false);
+                            // Clean up notifications...
+                            cleanNotifications();
+                        }, controller.signal)];
+                case 1:
+                    _a.sent();
+                    return [2 /*return*/];
+            }
+        });
+    }); };
+    var icon = active ? (_jsx(Loader, { size: "sm", className: "p-1" })) : (_jsx(FiDownload, { title: "download", size: 16 }));
+    return {
+        handleClick: handleClick,
+        icon: icon,
+        active: active
+    };
+};
+export default useGuppyActionButton;
+//# sourceMappingURL=downloadActionHook.js.map

package/dist/dts/features/CohortBuilder/downloads/downloadActionHook.js.map

@@ -0,0 +1 @@
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package/dist/dts/features/CohortBuilder/hooks.d.ts

@@ -0,0 +1,3 @@
+import { FilterSet } from '@gen3/core';
+export declare const useCohortFacetFilters: (index: string) => FilterSet;
+//# sourceMappingURL=hooks.d.ts.map

package/dist/dts/features/CohortBuilder/hooks.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"hooks.d.ts","sourceRoot":"","sources":["../../../../src/features/CohortBuilder/hooks.ts"],"names":[],"mappings":"AAAA,OAAO,EAAmB,SAAS,EAAuB,MAAM,YAAY,CAAC;AAE7E,eAAO,MAAM,qBAAqB,UAAU,MAAM,KAAG,SAEpD,CAAC"}

package/dist/dts/features/CohortBuilder/hooks.js

@@ -0,0 +1,5 @@
+import { useCoreSelector, selectCohortFilters } from '@gen3/core';
+export var useCohortFacetFilters = function (index) {
+    return useCoreSelector(function (state) { return selectCohortFilters(state)[index]; });
+};
+//# sourceMappingURL=hooks.js.map

package/dist/dts/features/CohortBuilder/hooks.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"hooks.js","sourceRoot":"","sources":["../../../../src/features/CohortBuilder/hooks.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,eAAe,EAAa,mBAAmB,EAAE,MAAM,YAAY,CAAC;AAE7E,MAAM,CAAC,IAAM,qBAAqB,GAAG,UAAC,KAAY;IAChD,OAAO,eAAe,CAAC,UAAC,KAAK,IAAK,OAAA,mBAAmB,CAAC,KAAK,CAAC,CAAC,KAAK,CAAC,EAAjC,CAAiC,CAAC,CAAC;AACvE,CAAC,CAAC"}

package/dist/dts/features/CohortBuilder/index.d.ts

@@ -0,0 +1,5 @@
+import { CohortBuilder } from './CohortBuilder';
+import { type CohortBuilderConfiguration } from './types';
+import { ExplorerTableCellRendererFactory, registerExplorerDefaultCellRenderers, registerCohortBuilderDefaultPreviewRenderers, type TableDetailsPanelProps, type CellRendererFunctionProps, ExplorerTableDetailsPanelFactory } from './ExplorerTable';
+export { CohortBuilder, type CohortBuilderConfiguration, type TableDetailsPanelProps, type CellRendererFunctionProps, ExplorerTableCellRendererFactory, ExplorerTableDetailsPanelFactory, registerExplorerDefaultCellRenderers, registerCohortBuilderDefaultPreviewRenderers, };
+//# sourceMappingURL=index.d.ts.map

package/dist/dts/features/CohortBuilder/index.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../../src/features/CohortBuilder/index.tsx"],"names":[],"mappings":"AAAA,OAAO,EAAE,aAAa,EAAE,MAAM,iBAAiB,CAAC;AAChD,OAAO,EAAE,KAAK,0BAA0B,EAAE,MAAM,SAAS,CAAC;AAE1D,OAAO,EACL,gCAAgC,EAChC,oCAAoC,EACpC,4CAA4C,EAC5C,KAAK,sBAAsB,EAC3B,KAAK,yBAAyB,EAC9B,gCAAgC,EACjC,MAAM,iBAAiB,CAAC;AAEzB,OAAO,EACL,aAAa,EACb,KAAK,0BAA0B,EAC/B,KAAK,sBAAsB,EAC3B,KAAK,yBAAyB,EAC9B,gCAAgC,EAChC,gCAAgC,EAChC,oCAAoC,EACpC,4CAA4C,GAC7C,CAAC"}

package/dist/dts/features/CohortBuilder/index.js

@@ -0,0 +1,4 @@
+import { CohortBuilder } from './CohortBuilder';
+import { ExplorerTableCellRendererFactory, registerExplorerDefaultCellRenderers, registerCohortBuilderDefaultPreviewRenderers, ExplorerTableDetailsPanelFactory, } from './ExplorerTable';
+export { CohortBuilder, ExplorerTableCellRendererFactory, ExplorerTableDetailsPanelFactory, registerExplorerDefaultCellRenderers, registerCohortBuilderDefaultPreviewRenderers, };
+//# sourceMappingURL=index.js.map

package/dist/dts/features/CohortBuilder/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../src/features/CohortBuilder/index.tsx"],"names":[],"mappings":"AAAA,OAAO,EAAE,aAAa,EAAE,MAAM,iBAAiB,CAAC;AAGhD,OAAO,EACL,gCAAgC,EAChC,oCAAoC,EACpC,4CAA4C,EAG5C,gCAAgC,GACjC,MAAM,iBAAiB,CAAC;AAEzB,OAAO,EACL,aAAa,EAIb,gCAAgC,EAChC,gCAAgC,EAChC,oCAAoC,EACpC,4CAA4C,GAC7C,CAAC"}

package/dist/dts/features/CohortBuilder/style.d.ts

@@ -0,0 +1,4 @@
+export declare const SecondaryTabStyle: string;
+export declare const getCombinedClassesExpandCollapseQuery: (allQueryExpressionsCollapsed: boolean) => string;
+export declare const getCombinedClassesForRowCollapse: (filtersSectionCollapsed: boolean) => string;
+//# sourceMappingURL=style.d.ts.map

package/dist/dts/features/CohortBuilder/style.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"style.d.ts","sourceRoot":"","sources":["../../../../src/features/CohortBuilder/style.ts"],"names":[],"mappings":"AAAA,eAAO,MAAM,iBAAiB,QAMY,CAAC;AAE3C,eAAO,MAAM,qCAAqC,iCAClB,OAAO,WAWtC,CAAC;AAEF,eAAO,MAAM,gCAAgC,4BAClB,OAAO,WAYjC,CAAC"}

package/dist/dts/features/CohortBuilder/style.js

@@ -0,0 +1,25 @@
+export var SecondaryTabStyle = 'flex flex-row items-center bg-base-max text-primary border font-medium ' +
+    'border-solid border-primary hover:bg-secondary-darker ' +
+    'hover:text-secondary-content-lightest rounded-md first:border-r-0 ' +
+    'last:border-l-0 first:rounded-r-none last:rounded-l-none ' +
+    'hover:border-secondary data-active:bg-secondary ' +
+    'data-active:text-secondary-content-max';
+export var getCombinedClassesExpandCollapseQuery = function (allQueryExpressionsCollapsed) {
+    var baseClasses = 'flex gap-0 items-center border-1 border-base-max rounded-md w-7 h-7';
+    var dynamicClasses = allQueryExpressionsCollapsed
+        ? 'text-primary bg-base-max'
+        : 'text-base-max bg-transparent';
+    var disabledClasses = 'disabled:opacity-50';
+    var enabledHoverClasses = 'enabled:hover:bg-primary-darkest enabled:hover:text-primary-content-lightest enabled:hover:border-primary-darkest';
+    return "".concat(dynamicClasses, " ").concat(disabledClasses, " ").concat(enabledHoverClasses, " ").concat(baseClasses);
+};
+export var getCombinedClassesForRowCollapse = function (filtersSectionCollapsed) {
+    var baseClasses = 'border-1 border-white rounded-md w-7 h-7 flex items-center';
+    var dynamicClasses = !filtersSectionCollapsed
+        ? 'text-primary bg-base-max'
+        : 'text-base-max bg-transparent';
+    var disabledClasses = 'disabled:opacity-50 disabled:bg-base-max disabled:text-primary';
+    var enabledHoverClasses = 'enabled:hover:bg-primary-darkest enabled:hover:text-primary-content-lightest enabled:hover:border-primary-darkest';
+    return "".concat(disabledClasses, " ").concat(enabledHoverClasses, " ").concat(baseClasses, " ").concat(dynamicClasses);
+};
+//# sourceMappingURL=style.js.map

package/dist/dts/features/CohortBuilder/style.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"style.js","sourceRoot":"","sources":["../../../../src/features/CohortBuilder/style.ts"],"names":[],"mappings":"AAAA,MAAM,CAAC,IAAM,iBAAiB,GAC5B,yEAAyE;IACzE,wDAAwD;IACxD,oEAAoE;IACpE,2DAA2D;IAC3D,kDAAkD;IAClD,wCAAwC,CAAC;AAE3C,MAAM,CAAC,IAAM,qCAAqC,GAAG,UACnD,4BAAqC;IAErC,IAAM,WAAW,GACf,qEAAqE,CAAC;IACxE,IAAM,cAAc,GAAG,4BAA4B;QACjD,CAAC,CAAC,0BAA0B;QAC5B,CAAC,CAAC,8BAA8B,CAAC;IACnC,IAAM,eAAe,GAAG,qBAAqB,CAAC;IAC9C,IAAM,mBAAmB,GACvB,mHAAmH,CAAC;IACtH,OAAO,UAAG,cAAc,cAAI,eAAe,cAAI,mBAAmB,cAAI,WAAW,CAAE,CAAC;AACtF,CAAC,CAAC;AAEF,MAAM,CAAC,IAAM,gCAAgC,GAAG,UAC9C,uBAAgC;IAEhC,IAAM,WAAW,GACf,4DAA4D,CAAC;IAC/D,IAAM,cAAc,GAAG,CAAC,uBAAuB;QAC7C,CAAC,CAAC,0BAA0B;QAC5B,CAAC,CAAC,8BAA8B,CAAC;IACnC,IAAM,eAAe,GACnB,gEAAgE,CAAC;IACnE,IAAM,mBAAmB,GACvB,mHAAmH,CAAC;IACtH,OAAO,UAAG,eAAe,cAAI,mBAAmB,cAAI,WAAW,cAAI,cAAc,CAAE,CAAC;AACtF,CAAC,CAAC"}

package/dist/dts/features/CohortBuilder/types.d.ts

@@ -0,0 +1,92 @@
+import { SummaryChart } from '../../components/charts';
+import { SummaryTable } from './ExplorerTable/types';
+import { FieldToName } from '../../components/facets/types';
+import { DownloadButtonProps } from '../../components/Buttons/DropdownButtons';
+import { Dispatch, SetStateAction } from 'react';
+import { Modals, FacetDefinition } from '@gen3/core';
+import { StylingOverride } from '../../types/styling';
+export type FacetType = 'enum' | 'range' | 'text' | 'number' | 'boolean' | 'date' | 'datetime';
+export interface TabConfig {
+    title: string;
+    fields: ReadonlyArray<string>;
+    fieldsConfig: Record<string, FacetDefinition>;
+    classNames?: StylingOverride;
+}
+export interface TabsConfig {
+    readonly tabs: ReadonlyArray<TabConfig>;
+}
+export interface ManifestFieldsConfig {
+    resourceIndexType: string;
+    resourceIdField: string;
+    referenceIdFieldInResourceIndex: string;
+    referenceIdFieldInDataIndex: string;
+}
+export interface DataTypeConfig {
+    dataType: string;
+    nodeCountTitle: string;
+    fieldMapping: ReadonlyArray<FieldToName>;
+    manifestMapping?: ManifestFieldsConfig;
+    accessibleFieldCheckList?: string[];
+    accessibleValidationField?: string;
+    tierAccessLevel?: 'libre' | 'regular' | 'private';
+    tierAccessLimit?: number;
+}
+export interface DownloadButtonConfig extends DownloadButtonProps {
+    dropdownId?: string;
+}
+export interface DropdownButtonsConfig {
+    readonly title: string;
+}
+export interface DropdownsWithButtonsProps extends DropdownButtonsConfig {
+    dropdownItems: ReadonlyArray<DownloadButtonProps>;
+}
+export interface CohortPanelConfig {
+    readonly guppyConfig: DataTypeConfig;
+    readonly tabTitle: string;
+    readonly charts?: Record<string, SummaryChart>;
+    readonly table?: SummaryTable;
+    readonly filters?: TabsConfig;
+    readonly dropdowns?: Record<string, DropdownsWithButtonsProps>;
+    readonly buttons?: ReadonlyArray<DownloadButtonConfig>;
+    readonly loginForDownload?: boolean;
+}
+export interface CohortBuilderConfiguration {
+    explorerConfig: Array<CohortPanelConfig>;
+}
+export interface CohortConfig {
+    tabs: TabConfig[];
+}
+export declare enum DownloadFileFormats {
+    JSON = "JSON",
+    CSV = "CSV",
+    TSV = "TSV",
+    DATA = "DATA",
+    UNDEFINED = "UNDEFINED"
+}
+export type ActionButtonFunction = (done?: () => void, onError?: (error: Error) => void, onAbort?: () => void, signal?: AbortSignal) => Promise<void>;
+export type ActionButtonWithArgsFunction = (params: Record<string, any>, done?: () => void, onError?: (error: Error) => void, onAbort?: () => void, signal?: AbortSignal) => Promise<void>;
+export interface DownloadButtonPropsWithAction extends Omit<DownloadButtonProps, 'action' | 'actionArgs'> {
+    actionFunction: ActionButtonWithArgsFunction;
+    actionArgs: Record<string, any>;
+}
+export interface GuppyActionButtonProps {
+    disabled?: boolean;
+    inactiveText: string;
+    activeText: string;
+    customStyle?: string;
+    showLoading?: boolean;
+    showIcon?: boolean;
+    preventClickEvent?: boolean;
+    onClick?: () => void;
+    setActive?: Dispatch<SetStateAction<boolean>>;
+    active?: boolean;
+    Modal403?: Modals;
+    Modal400?: Modals;
+    tooltipText?: string;
+    done?: () => void;
+    actionFunction: ActionButtonWithArgsFunction;
+    actionArgs: Record<string, any>;
+    customErrorMessage?: string;
+    hideNotification?: boolean;
+}
+//# sourceMappingURL=types.d.ts.map

package/dist/dts/features/CohortBuilder/types.d.ts.map

@@ -0,0 +1 @@
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package/dist/dts/features/CohortBuilder/types.js

@@ -0,0 +1,10 @@
+// set of interfaces which follows the current explorer configuration
+export var DownloadFileFormats;
+(function (DownloadFileFormats) {
+    DownloadFileFormats["JSON"] = "JSON";
+    DownloadFileFormats["CSV"] = "CSV";
+    DownloadFileFormats["TSV"] = "TSV";
+    DownloadFileFormats["DATA"] = "DATA";
+    DownloadFileFormats["UNDEFINED"] = "UNDEFINED";
+})(DownloadFileFormats || (DownloadFileFormats = {}));
+//# sourceMappingURL=types.js.map

package/dist/dts/features/CohortBuilder/types.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"types.js","sourceRoot":"","sources":["../../../../src/features/CohortBuilder/types.ts"],"names":[],"mappings":"AAAA,qEAAqE;AAiFrE,MAAM,CAAN,IAAY,mBAMX;AAND,WAAY,mBAAmB;IAC7B,oCAAa,CAAA;IACb,kCAAW,CAAA;IACX,kCAAW,CAAA;IACX,oCAAa,CAAA;IACb,8CAAuB,CAAA;AACzB,CAAC,EANW,mBAAmB,KAAnB,mBAAmB,QAM9B"}

package/dist/dts/features/Crosswalk/CrosswalkPanel.d.ts

@@ -0,0 +1,4 @@
+import { type CrosswalkConfig } from './types';
+declare const CrosswalkPanel: ({ mapping, showSubmittedIdInTable, }: CrosswalkConfig) => import("react/jsx-runtime").JSX.Element;
+export default CrosswalkPanel;
+//# sourceMappingURL=CrosswalkPanel.d.ts.map

package/dist/dts/features/Crosswalk/CrosswalkPanel.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"CrosswalkPanel.d.ts","sourceRoot":"","sources":["../../../../src/features/Crosswalk/CrosswalkPanel.tsx"],"names":[],"mappings":"AAIA,OAAO,EAAE,KAAK,eAAe,EAAoB,MAAM,SAAS,CAAC;AAuCjE,QAAA,MAAM,cAAc,yCAGjB,eAAe,4CA4IjB,CAAC;AAEF,eAAe,cAAc,CAAC"}