@gen3/core 0.10.75 → 0.10.76

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (33) hide show
  1. package/dist/cjs/index.js +47 -33
  2. package/dist/cjs/index.js.map +1 -1
  3. package/dist/dts/features/aiSearch/aiSearchSlice.d.ts +24 -24
  4. package/dist/dts/features/authz/authzMappingSlice.d.ts +36 -36
  5. package/dist/dts/features/dataLibrary/dataLibraryApi.d.ts +24 -24
  6. package/dist/dts/features/download/downloadStatusApi.d.ts +39 -37
  7. package/dist/dts/features/download/downloadStatusApi.d.ts.map +1 -1
  8. package/dist/dts/features/fence/credentialsApi.d.ts +12 -12
  9. package/dist/dts/features/fence/fenceApi.d.ts +39 -37
  10. package/dist/dts/features/fence/fenceApi.d.ts.map +1 -1
  11. package/dist/dts/features/fence/jwtApi.d.ts +12 -12
  12. package/dist/dts/features/gen3Apps/Gen3AppRTKQ.d.ts +3 -3
  13. package/dist/dts/features/graphQL/graphQLSlice.d.ts +12 -12
  14. package/dist/dts/features/guppy/guppySlice.d.ts +138 -134
  15. package/dist/dts/features/guppy/guppySlice.d.ts.map +1 -1
  16. package/dist/dts/features/metadata/metadataSlice.d.ts +99 -97
  17. package/dist/dts/features/metadata/metadataSlice.d.ts.map +1 -1
  18. package/dist/dts/features/sower/sowerApi.d.ts +63 -61
  19. package/dist/dts/features/sower/sowerApi.d.ts.map +1 -1
  20. package/dist/dts/features/submission/submissionApi.d.ts +90 -86
  21. package/dist/dts/features/submission/submissionApi.d.ts.map +1 -1
  22. package/dist/dts/features/user/externalLoginsSlice.d.ts +54 -50
  23. package/dist/dts/features/user/externalLoginsSlice.d.ts.map +1 -1
  24. package/dist/dts/features/user/userSliceRTK.d.ts +123 -121
  25. package/dist/dts/features/user/userSliceRTK.d.ts.map +1 -1
  26. package/dist/dts/features/workspace/workspaceApi.d.ts +138 -138
  27. package/dist/dts/utils/fetch.d.ts +2 -2
  28. package/dist/dts/utils/fetch.d.ts.map +1 -1
  29. package/dist/esm/index.js +27 -19
  30. package/dist/esm/index.js.map +1 -1
  31. package/dist/index.d.ts +845 -825
  32. package/package.json +2 -3
  33. package/LICENSE +0 -201
package/dist/cjs/index.js CHANGED
@@ -56,12 +56,12 @@ const GEN3_WTS_API = process.env.NEXT_PUBLIC_GEN3_WTS_API || `${GEN3_API}/wts`;
56
56
  const GEN3_DATA_LIBRARY_API = process.env.NEXT_PUBLIC_GEN3_DATA_LIBRARY_API || `${GEN3_API}/library/lists`;
57
57
  const GEN3_CROSSWALK_API = process.env.NEXT_PUBLIC_GEN3_CROSSWALK_API || `${GEN3_API}/mds`;
58
58
  const GEN3_SOWER_API = process.env.NEXT_PUBLIC_GEN3_SOWER_API || `${GEN3_API}/jobs`;
59
- exports.Accessibility = void 0;
60
- (function(Accessibility) {
59
+ var Accessibility = /*#__PURE__*/ function(Accessibility) {
61
60
  Accessibility["ACCESSIBLE"] = "accessible";
62
61
  Accessibility["UNACCESSIBLE"] = "unaccessible";
63
62
  Accessibility["ALL"] = "all";
64
- })(exports.Accessibility || (exports.Accessibility = {}));
63
+ return Accessibility;
64
+ }({});
65
65
  const FILE_DELIMITERS = {
66
66
  tsv: '\t',
67
67
  csv: ','
@@ -639,14 +639,18 @@ const slice$2 = toolkit.createSlice({
639
639
  const drsHostnamesReducer = slice$2.reducer;
640
640
  const { setDRSHostnames } = slice$2.actions;
641
641
 
642
- exports.Modals = void 0;
643
- (function(Modals) {
642
+ /**
643
+ * Defines the modals slice of the Redux store.
644
+ * This slice is used to control the display of standard Gen3 modals.
645
+ * and can be extended to add custom modals by representing them as strings.
646
+ */ var Modals = /*#__PURE__*/ function(Modals) {
644
647
  Modals["FirstTimeModal"] = "FirstTimeModal";
645
648
  Modals["SessionExpireModal"] = "SessionExpireModal";
646
649
  Modals["NoAccessModal"] = "NoAccessModal";
647
650
  Modals["CreateCredentialsAPIKeyModal"] = "CreateCredentialsAPIKeyModal";
648
651
  Modals["GeneralErrorModal"] = "GeneralErrorModal";
649
- })(exports.Modals || (exports.Modals = {}));
652
+ return Modals;
653
+ }({});
650
654
  const initialState$2 = {
651
655
  currentModal: null
652
656
  };
@@ -1387,8 +1391,9 @@ toolkit.createSelector([
1387
1391
  (_, rootObjectId)=>rootObjectId
1388
1392
  ], (dataLibrary, rootObjectId)=>dataLibrary[rootObjectId] || []);
1389
1393
 
1390
- exports.WorkspaceStatus = void 0;
1391
- (function(WorkspaceStatus) {
1394
+ /**
1395
+ * Workspace Pod status
1396
+ */ var WorkspaceStatus = /*#__PURE__*/ function(WorkspaceStatus) {
1392
1397
  WorkspaceStatus["Launching"] = "Launching";
1393
1398
  WorkspaceStatus["Running"] = "Running";
1394
1399
  WorkspaceStatus["Terminating"] = "Terminating";
@@ -1396,28 +1401,31 @@ exports.WorkspaceStatus = void 0;
1396
1401
  WorkspaceStatus["NotFound"] = "Not Found";
1397
1402
  WorkspaceStatus["Errored"] = "Errored";
1398
1403
  WorkspaceStatus["StatusError"] = "Status Error";
1399
- })(exports.WorkspaceStatus || (exports.WorkspaceStatus = {}));
1400
- exports.RequestedWorkspaceStatus = void 0;
1401
- (function(RequestedWorkspaceStatus) {
1404
+ return WorkspaceStatus;
1405
+ }({});
1406
+ /**
1407
+ * requested state of pod, either by user or workspace monitor
1408
+ */ var RequestedWorkspaceStatus = /*#__PURE__*/ function(RequestedWorkspaceStatus) {
1402
1409
  RequestedWorkspaceStatus["Launch"] = "Launch";
1403
1410
  RequestedWorkspaceStatus["Terminate"] = "Terminate";
1404
1411
  RequestedWorkspaceStatus["Unset"] = "Unset";
1405
- })(exports.RequestedWorkspaceStatus || (exports.RequestedWorkspaceStatus = {}));
1406
- exports.PodConditionType = void 0;
1407
- (function(PodConditionType) {
1412
+ return RequestedWorkspaceStatus;
1413
+ }({});
1414
+ var PodConditionType = /*#__PURE__*/ function(PodConditionType) {
1408
1415
  PodConditionType["PodScheduled"] = "PodScheduled";
1409
1416
  PodConditionType["Initialized"] = "Initialized";
1410
1417
  PodConditionType["ContainersReady"] = "ContainersReady";
1411
1418
  PodConditionType["PodReadyToStartContainers"] = "PodReadyToStartContainers";
1412
1419
  PodConditionType["ProxyConnected"] = "ProxyConnected";
1413
1420
  PodConditionType["Ready"] = "Ready";
1414
- })(exports.PodConditionType || (exports.PodConditionType = {}));
1415
- exports.PodStatus = void 0;
1416
- (function(PodStatus) {
1421
+ return PodConditionType;
1422
+ }({});
1423
+ var PodStatus = /*#__PURE__*/ function(PodStatus) {
1417
1424
  PodStatus["True"] = "True";
1418
1425
  PodStatus["False"] = "False";
1419
1426
  PodStatus["Unknown"] = "Unknown";
1420
- })(exports.PodStatus || (exports.PodStatus = {}));
1427
+ return PodStatus;
1428
+ }({});
1421
1429
 
1422
1430
  // Using the built-in Date object
1423
1431
  const getCurrentTimestamp = ()=>{
@@ -1437,8 +1445,8 @@ const isTimeGreaterThan = (startTime, minutes)=>{
1437
1445
  const NO_WORKSPACE_ID = 'none';
1438
1446
  const initialState = {
1439
1447
  id: NO_WORKSPACE_ID,
1440
- status: exports.WorkspaceStatus.NotFound,
1441
- requestedStatus: exports.RequestedWorkspaceStatus.Unset,
1448
+ status: WorkspaceStatus.NotFound,
1449
+ requestedStatus: RequestedWorkspaceStatus.Unset,
1442
1450
  requestedStatusTimestamp: getCurrentTimestamp()
1443
1451
  };
1444
1452
  const slice = toolkit.createSlice({
@@ -1857,7 +1865,7 @@ const useGetStatus = ()=>{
1857
1865
  }
1858
1866
  }),
1859
1867
  getRawDataAndTotalCounts: builder.query({
1860
- query: ({ type, fields, filters, sort, offset = 0, size = 20, accessibility = exports.Accessibility.ALL, format = undefined })=>{
1868
+ query: ({ type, fields, filters, sort, offset = 0, size = 20, accessibility = Accessibility.ALL, format = undefined })=>{
1861
1869
  const gqlFilter = convertFilterSetToGqlFilter(filters);
1862
1870
  const params = [
1863
1871
  ...sort ? [
@@ -1914,7 +1922,7 @@ const useGetStatus = ()=>{
1914
1922
  }
1915
1923
  }),
1916
1924
  getAggs: builder.query({
1917
- query: ({ type, fields, filters, accessibility = exports.Accessibility.ALL })=>{
1925
+ query: ({ type, fields, filters, accessibility = Accessibility.ALL })=>{
1918
1926
  const queryStart = isFilterEmpty(filters) ? `
1919
1927
  query getAggs {
1920
1928
  _aggregation {
@@ -1939,7 +1947,7 @@ const useGetStatus = ()=>{
1939
1947
  }
1940
1948
  }),
1941
1949
  getSubAggs: builder.query({
1942
- query: ({ type, mainField, termsFields = undefined, missingFields = undefined, numericAggAsText = false, gqlFilter = undefined, accessibility = exports.Accessibility.ALL })=>{
1950
+ query: ({ type, mainField, termsFields = undefined, missingFields = undefined, numericAggAsText = false, gqlFilter = undefined, accessibility = Accessibility.ALL })=>{
1943
1951
  const nestedAggFields = {
1944
1952
  termsFields: termsFields,
1945
1953
  missingFields: missingFields
@@ -1964,7 +1972,7 @@ const useGetStatus = ()=>{
1964
1972
  }
1965
1973
  }),
1966
1974
  getCounts: builder.query({
1967
- query: ({ type, filters, accessibility = exports.Accessibility.ALL })=>{
1975
+ query: ({ type, filters, accessibility = Accessibility.ALL })=>{
1968
1976
  const gqlFilters = convertFilterSetToGqlFilter(filters);
1969
1977
  const queryLine = `query totalCounts ${gqlFilters ? '($filter: JSON)' : ''}{`;
1970
1978
  const typeAggsLine = `${type} ${gqlFilters ? '(filter: $filter, ' : '('} accessibility: ${accessibility}) {`;
@@ -1988,7 +1996,7 @@ const useGetStatus = ()=>{
1988
1996
  }
1989
1997
  }),
1990
1998
  getFieldCountSummary: builder.query({
1991
- query: ({ type, field, filters, accessibility = exports.Accessibility.ALL })=>{
1999
+ query: ({ type, field, filters, accessibility = Accessibility.ALL })=>{
1992
2000
  const gqlFilters = convertFilterSetToGqlFilter(filters);
1993
2001
  const query = `query summary ($filter: JSON) {
1994
2002
  _aggregation {
@@ -2348,7 +2356,7 @@ const coreStore = toolkit.configureStore({
2348
2356
  query.setupListeners(coreStore.dispatch);
2349
2357
 
2350
2358
  const isNotDefined = (x)=>{
2351
- return x === undefined || x === null || x === void 0;
2359
+ return x === undefined || x === null || x === undefined;
2352
2360
  };
2353
2361
  const isObject = (x)=>{
2354
2362
  return typeof x === 'object';
@@ -2900,7 +2908,7 @@ const WorkspaceWithTags = gen3Api.enhanceEndpoints({
2900
2908
  ]
2901
2909
  });
2902
2910
  const EmptyWorkspaceStatusResponse = {
2903
- status: exports.WorkspaceStatus.NotFound,
2911
+ status: WorkspaceStatus.NotFound,
2904
2912
  conditions: [],
2905
2913
  containerStates: [],
2906
2914
  idleTimeLimit: 0,
@@ -2961,7 +2969,7 @@ const workspacesApi = WorkspaceWithTags.injectEndpoints({
2961
2969
  }
2962
2970
  // TODO: Find out IF this is code is required
2963
2971
  const workspaceStatusData = workspaceStatus.data;
2964
- if (workspaceStatusData.status === exports.WorkspaceStatus.Running && (currentWorkspaceStatus === 'Not Found' || currentWorkspaceStatus === 'Launching')) {
2972
+ if (workspaceStatusData.status === WorkspaceStatus.Running && (currentWorkspaceStatus === 'Not Found' || currentWorkspaceStatus === 'Launching')) {
2965
2973
  const proxyStatus = await fetchWithBQ(`${GEN3_WORKSPACE_API}/proxy/`);
2966
2974
  let statusError = undefined;
2967
2975
  if (isFetchParseError(proxyStatus.error)) {
@@ -2974,11 +2982,11 @@ const workspacesApi = WorkspaceWithTags.injectEndpoints({
2974
2982
  return {
2975
2983
  data: {
2976
2984
  ...workspaceStatusData,
2977
- status: exports.WorkspaceStatus.Launching,
2985
+ status: WorkspaceStatus.Launching,
2978
2986
  conditions: [
2979
2987
  {
2980
2988
  type: 'ProxyConnected',
2981
- status: exports.PodStatus.False
2989
+ status: PodStatus.False
2982
2990
  }
2983
2991
  ]
2984
2992
  }
@@ -3025,12 +3033,12 @@ const workspaceStatusSelector = workspacesApi.endpoints.getWorkspaceStatus.selec
3025
3033
  const selectWorkspaceStatusFromService = toolkit.createSelector(workspaceStatusSelector, (status)=>status.data ?? {
3026
3034
  ...EmptyWorkspaceStatusResponse
3027
3035
  });
3028
- const selectWorkspaceStatus = toolkit.createSelector(workspaceStatusSelector, (status)=>status?.data?.status ?? exports.WorkspaceStatus.NotFound);
3036
+ const selectWorkspaceStatus = toolkit.createSelector(workspaceStatusSelector, (status)=>status?.data?.status ?? WorkspaceStatus.NotFound);
3029
3037
  const paymodelStatusSelector = workspacesApi.endpoints.getWorkspacePayModels.select();
3030
3038
  const selectPaymodelStatus = toolkit.createSelector(paymodelStatusSelector, (status)=>status);
3031
3039
 
3032
- const isWorkspaceActive = (status)=>status === exports.WorkspaceStatus.Running || status === exports.WorkspaceStatus.Launching || status === exports.WorkspaceStatus.Terminating;
3033
- const isWorkspaceRunningOrStopping = (status)=>status === exports.WorkspaceStatus.Running || status === exports.WorkspaceStatus.Terminating;
3040
+ const isWorkspaceActive = (status)=>status === WorkspaceStatus.Running || status === WorkspaceStatus.Launching || status === WorkspaceStatus.Terminating;
3041
+ const isWorkspaceRunningOrStopping = (status)=>status === WorkspaceStatus.Running || status === WorkspaceStatus.Terminating;
3034
3042
 
3035
3043
  const resourcePathFromProjectID = (projectID)=>{
3036
3044
  const split = projectID.split('-');
@@ -3271,6 +3279,7 @@ const { useGetProjectsQuery, useGetSubmissionGraphQLQuery, useGetProjectsDetails
3271
3279
  });
3272
3280
  const { useGetSowerJobListQuery, useLazyGetSowerJobListQuery, useSubmitSowerJobMutation, useGetSowerJobStatusQuery, useGetSowerOutputQuery, useGetSowerServiceStatusQuery } = loadingStatusApi;
3273
3281
 
3282
+ exports.Accessibility = Accessibility;
3274
3283
  exports.CoreProvider = CoreProvider;
3275
3284
  exports.EmptyWorkspaceStatusResponse = EmptyWorkspaceStatusResponse;
3276
3285
  exports.GEN3_API = GEN3_API;
@@ -3288,6 +3297,11 @@ exports.GEN3_SUBMISSION_API = GEN3_SUBMISSION_API;
3288
3297
  exports.GEN3_WORKSPACE_API = GEN3_WORKSPACE_API;
3289
3298
  exports.HTTPError = HTTPError;
3290
3299
  exports.HTTPErrorMessages = HTTPErrorMessages;
3300
+ exports.Modals = Modals;
3301
+ exports.PodConditionType = PodConditionType;
3302
+ exports.PodStatus = PodStatus;
3303
+ exports.RequestedWorkspaceStatus = RequestedWorkspaceStatus;
3304
+ exports.WorkspaceStatus = WorkspaceStatus;
3291
3305
  exports.clearActiveWorkspaceId = clearActiveWorkspaceId;
3292
3306
  exports.clearCohortFilters = clearCohortFilters;
3293
3307
  exports.clearDataLibrarySelection = clearDataLibrarySelection;