@gen-epix/ui-client-casedb 4.1.0 → 4.2.0

package/dist/_chunks/Upload.js

@@ -10,30 +10,30 @@ import { t as u } from "./CompletCaseTypeLoader.js";
 import { t as d } from "./shallow.js";
 import { UPLOAD_STEP as f } from "../models/upload.js";
 import { UploadStoreContext as p } from "../stores/uploadStore/index.js";
-import { c as m, o as h } from "./index.esm.js";
-import { t as g } from "./yup.js";
-import { useCaseTypeOptionsQuery as _, useCaseTypesQuery as v } from "../dataHooks/useCaseTypesQuery/index.js";
-import { useDataCollectionOptionsQuery as y } from "../dataHooks/useDataCollectionsQuery/index.js";
-import { useColMapQuery as b, useColsQuery as x } from "../dataHooks/useColsQuery/index.js";
-import { CaseContentFormDialog as S } from "../components/ui/CaseContentFormDialog/index.js";
-import { useSequencingProtocolOptionsQuery as C } from "../dataHooks/useSequencingProtocolsQuery/index.js";
-import { useAssemblyProtocolOptionsQuery as w } from "../dataHooks/useAssemblyProtocolsQuery/index.js";
-import { mixed as T, object as E, string as D } from "yup";
-import { CaseDbCaseApi as O, CaseDbDataIssueType as k, CaseDbEtlStatus as A, CaseDbUploadAction as j } from "@gen-epix/api-casedb";
+import { t as m } from "./yup.js";
+import { useCaseTypeOptionsQuery as h, useCaseTypesQuery as g } from "../dataHooks/useCaseTypesQuery/index.js";
+import { useDataCollectionOptionsQuery as _ } from "../dataHooks/useDataCollectionsQuery/index.js";
+import { useColMapQuery as v, useColsQuery as y } from "../dataHooks/useColsQuery/index.js";
+import { CaseContentFormDialog as b } from "../components/ui/CaseContentFormDialog/index.js";
+import { useSequencingProtocolOptionsQuery as x } from "../dataHooks/useSequencingProtocolsQuery/index.js";
+import { useAssemblyProtocolOptionsQuery as S } from "../dataHooks/useAssemblyProtocolsQuery/index.js";
+import { mixed as C, object as w, string as T } from "yup";
+import { CaseDbCaseApi as E, CaseDbDataIssueType as D, CaseDbEtlStatus as O, CaseDbUploadAction as k } from "@gen-epix/api-casedb";
 import { QueryClientService as ee } from "@gen-epix/ui-client-common/classes/services/QueryClientService";
-import { ObjectUtil as M } from "@gen-epix/ui-core/utils/ObjectUtil";
-import { FORM_FIELD_DEFINITION_TYPE as N } from "@gen-epix/ui-core-form/models/form";
-import { ConfigService as te } from "@gen-epix/ui-client-common/classes/services/ConfigService";
-import { Alert as P, AlertTitle as F, Autocomplete as ne, Box as I, Button as L, Container as R, ListItemIcon as z, ListItemText as B, MenuItem as re, Table as V, TableBody as H, TableCell as U, TableHead as ie, TableRow as ae, TextField as oe, Tooltip as se, Typography as ce, useTheme as le } from "@mui/material";
-import { use as W, useCallback as G, useEffect as K, useId as ue, useMemo as q, useRef as J, useState as Y } from "react";
+import { ObjectUtil as A } from "@gen-epix/ui-core/utils/ObjectUtil";
+import { FORM_FIELD_DEFINITION_TYPE as j } from "@gen-epix/ui-core-form/models/form";
+import { ConfigService as M } from "@gen-epix/ui-client-common/classes/services/ConfigService";
+import { Alert as N, AlertTitle as P, Autocomplete as F, Box as I, Button as L, Container as te, ListItemIcon as ne, ListItemText as R, MenuItem as z, Table as B, TableBody as V, TableCell as H, TableHead as U, TableRow as re, TextField as ie, Tooltip as ae, Typography as oe, useTheme as se } from "@mui/material";
+import { use as W, useCallback as G, useEffect as K, useId as ce, useMemo as q, useRef as J, useState as Y } from "react";
 import { useTranslation as X } from "react-i18next";
-import { TableStoreContextProvider as de, createTableStore as fe, useTableStoreContext as pe } from "@gen-epix/ui-client-common/stores/tableStore";
+import { TableStoreContextProvider as le, createTableStore as ue, useTableStoreContext as de } from "@gen-epix/ui-client-common/stores/tableStore";
 import { Fragment as Z, jsx as Q, jsxs as $ } from "react/jsx-runtime";
-import { ResponseHandler as me } from "@gen-epix/ui-client-common/components/ui/ResponseHandler";
-import { useItemQuery as he } from "@gen-epix/ui-client-common/hooks/useItemQuery";
-import { useArray as ge } from "@gen-epix/ui-core/hooks/useArray";
-import _e from "@mui/material/Box";
-import { Stepper as ve } from "@gen-epix/ui-core-components/components/Stepper";
+import { ResponseHandler as fe } from "@gen-epix/ui-client-common/components/ui/ResponseHandler";
+import { useItemQuery as pe } from "@gen-epix/ui-client-common/hooks/useItemQuery";
+import { useArray as me } from "@gen-epix/ui-core/hooks/useArray";
+import he from "@mui/material/Box";
+import { Stepper as ge } from "@gen-epix/ui-core-components/components/Stepper";
+import { useForm as _e, useWatch as ve } from "react-hook-form";
 import { GenericForm as ye } from "@gen-epix/ui-core-form/components/helpers/GenericForm";
 import { useQueryMemo as be } from "@gen-epix/ui-client-common/hooks/useQueryMemo";
 import { useIdentifierIssuerOwnOrganizationOptionsQuery as xe } from "@gen-epix/ui-client-common/dataHooks/useIdentifierIssuerOwnOrganizationQuery";
@@ -80,70 +80,70 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		})]
 	});
 }, He = () => {
-	let { t: e } = X(), n = v(), r = _(), a = y(), o = x(), s = ue(), c = W(p), u = l(c, (e) => e.caseTypeId), d = l(c, (e) => e.fileList), f = l(c, (e) => e.fileName), m = l(c, (e) => e.fileParsingError), b = l(c, (e) => e.goToNextStep), S = l(c, (e) => e.createdInDataCollectionOptions), C = l(c, (e) => e.rawData), w = l(c, (e) => e.setCols), k = l(c, (e) => e.setCaseTypeId), A = l(c, (e) => e.setCompleteCaseType), j = l(c, (e) => e.setCreatedInDataCollectionId), ee = l(c, (e) => e.setFileList), M = l(c, (e) => e.setSheet), te = l(c, (e) => e.setDataCollectionOptions), ne = l(c, (e) => e.sheet), I = l(c, (e) => e.sheetOptions), L = q(() => E().shape({
-		caseTypeId: D().uuid4().required(),
-		createdInDataCollectionId: D().uuid4().required(),
-		fileList: T().required(e`File is required`),
-		sheet: D().when("fileList", {
+	let { t: e } = X(), n = g(), r = h(), a = _(), o = y(), s = ce(), c = W(p), u = l(c, (e) => e.caseTypeId), d = l(c, (e) => e.fileList), f = l(c, (e) => e.fileName), v = l(c, (e) => e.fileParsingError), b = l(c, (e) => e.goToNextStep), x = l(c, (e) => e.createdInDataCollectionOptions), S = l(c, (e) => e.rawData), D = l(c, (e) => e.setCols), O = l(c, (e) => e.setCaseTypeId), k = l(c, (e) => e.setCompleteCaseType), ee = l(c, (e) => e.setCreatedInDataCollectionId), A = l(c, (e) => e.setFileList), M = l(c, (e) => e.setSheet), F = l(c, (e) => e.setDataCollectionOptions), I = l(c, (e) => e.sheet), L = l(c, (e) => e.sheetOptions), ne = q(() => w().shape({
+		caseTypeId: T().uuid4().required(),
+		createdInDataCollectionId: T().uuid4().required(),
+		fileList: C().required(e`File is required`),
+		sheet: T().when("fileList", {
 			is: t.isXlsxFile(f),
 			otherwise: (e) => e.notRequired(),
 			then: (t) => t.required(e`Sheet is required`)
 		})
-	}), [f, e]), z = h({
+	}), [f, e]), R = _e({
 		defaultValues: {
 			caseTypeId: null,
 			createdInDataCollectionId: null,
 			fileList: null,
 			sheet: null
 		},
-		resolver: g(L),
+		resolver: m(ne),
 		values: {
 			caseTypeId: c.getState().caseTypeId ?? null,
 			createdInDataCollectionId: c.getState().createdInDataCollectionId ?? null,
 			fileList: c.getState().fileList ?? null,
 			sheet: c.getState().sheet ?? null
 		}
-	}), { handleSubmit: B, setError: re, setValue: V } = z;
+	}), { handleSubmit: z, setError: B, setValue: V } = R;
 	K(() => {
-		Array.isArray(o?.data) && w(o.data);
-	}, [o.data, w]), K(() => {
-		a?.options?.length && te(a.options);
-	}, [a?.options, te]);
-	let { data: H, error: U, isLoading: ie } = he({
+		Array.isArray(o?.data) && D(o.data);
+	}, [o.data, D]), K(() => {
+		a?.options?.length && F(a.options);
+	}, [a?.options, F]);
+	let { data: H, error: U, isLoading: re } = pe({
 		baseQueryKey: i.COMPLETE_CASE_TYPES,
 		itemId: u,
 		useQueryOptions: {
 			enabled: !!u,
-			queryFn: async ({ signal: e }) => (await O.getInstance().completeCaseTypesGetOne(u, { signal: e })).data
+			queryFn: async ({ signal: e }) => (await E.getInstance().completeCaseTypesGetOne(u, { signal: e })).data
 		}
 	});
 	K(() => {
-		H && A(H);
-	}, [H, A]);
-	let ae = G(async (e) => {
-		await ee(e);
-	}, [ee]), oe = G(async (e) => {
+		H && k(H);
+	}, [H, k]);
+	let ie = G(async (e) => {
+		await A(e);
+	}, [A]), ae = G(async (e) => {
 		await M(e);
 	}, [M]), se = G((e) => {
-		k(e);
-	}, [k]), le = G((e) => {
-		j(e);
-	}, [j]), J = q(() => {
+		O(e);
+	}, [O]), J = G((e) => {
+		ee(e);
+	}, [ee]), Y = q(() => {
 		let n = [{
 			accept: ".csv,.tsv,.txt,.xlsx",
-			definition: N.FILE,
+			definition: j.FILE,
 			label: e`File`,
 			name: "fileList",
-			onChange: ae
+			onChange: ie
 		}];
 		return t.isXlsxFile(f) && n.push({
-			definition: N.SELECT,
+			definition: j.SELECT,
 			label: e`Sheet`,
 			name: "sheet",
-			onChange: oe,
-			options: I
+			onChange: ae,
+			options: L
 		}), n.push({
-			definition: N.AUTOCOMPLETE,
+			definition: j.AUTOCOMPLETE,
 			disabled: !d,
 			label: e`Case type`,
 			loading: r.isLoading,
@@ -151,50 +151,50 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			onChange: se,
 			options: r.options
 		}, {
-			definition: N.SELECT,
+			definition: j.SELECT,
 			disabled: !d || !u,
 			label: e`Create in data collection`,
-			loading: a.isLoading || ie,
+			loading: a.isLoading || re,
 			name: "createdInDataCollectionId",
-			onChange: le,
-			options: S
+			onChange: J,
+			options: x
 		}), n;
 	}, [
 		e,
-		ae,
+		ie,
 		f,
 		r.options,
 		r.isLoading,
 		d,
 		se,
-		S,
+		x,
 		a.isLoading,
-		ie,
+		re,
 		u,
-		le,
-		I,
-		oe
+		J,
+		L,
+		ae
 	]);
 	K(() => {
-		m ? re("fileList", {
-			message: m,
+		v ? B("fileList", {
+			message: v,
 			type: "manual"
-		}) : re("fileList", void 0);
+		}) : B("fileList", void 0);
 	}, [
-		m,
-		re,
+		v,
+		B,
 		V
 	]);
-	let Y = G(async () => {
+	let le = G(async () => {
 		await b();
-	}, [b]), de = ge([
+	}, [b]), ue = me([
 		n,
 		r,
 		a,
 		o
-	]), fe = G(async () => {
-		await B(Y)();
-	}, [B, Y]), pe = q(() => !(o.isLoading === !1 && o.data?.length === 0 || r.isLoading === !1 && r.options?.length === 0 || a.isLoading === !1 && a.options?.length === 0), [
+	]), de = G(async () => {
+		await z(le)();
+	}, [z, le]), he = q(() => !(o.isLoading === !1 && o.data?.length === 0 || r.isLoading === !1 && r.options?.length === 0 || a.isLoading === !1 && a.options?.length === 0), [
 		o.data?.length,
 		o.isLoading,
 		r.isLoading,
@@ -202,69 +202,69 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		a.isLoading,
 		a.options?.length
 	]);
-	return /* @__PURE__ */ Q(me, {
+	return /* @__PURE__ */ Q(fe, {
 		error: U,
 		inlineSpinner: !0,
-		loadables: de,
-		children: /* @__PURE__ */ $(R, {
+		loadables: ue,
+		children: /* @__PURE__ */ $(te, {
 			maxWidth: "lg",
-			children: [!pe && /* @__PURE__ */ Q(P, {
+			children: [!he && /* @__PURE__ */ Q(N, {
 				severity: "warning",
 				sx: { mb: 2 },
 				children: e("Upload is disabled because you have insufficient data access to proceed. Contact your organization administrator for assistance.")
-			}), pe && /* @__PURE__ */ $(Z, { children: [
-				C && C.length > 0 && /* @__PURE__ */ $(P, {
+			}), he && /* @__PURE__ */ $(Z, { children: [
+				S && S.length > 0 && /* @__PURE__ */ $(N, {
 					severity: "info",
 					sx: { mb: 2 },
 					children: [
-						/* @__PURE__ */ Q(F, { children: e("{{fileName}} loaded successfully", { fileName: f }) }),
-						ne && /* @__PURE__ */ Q(ce, { children: e("Sheet name: {{sheet}}", { sheet: ne || "" }) }),
-						/* @__PURE__ */ Q(ce, { children: e("Number of columns: {{columnCount}}", { columnCount: C[0].length }) }),
-						/* @__PURE__ */ Q(ce, { children: e("Number of data rows: {{rowCount}}", { rowCount: C.length - 1 }) })
+						/* @__PURE__ */ Q(P, { children: e("{{fileName}} loaded successfully", { fileName: f }) }),
+						I && /* @__PURE__ */ Q(oe, { children: e("Sheet name: {{sheet}}", { sheet: I || "" }) }),
+						/* @__PURE__ */ Q(oe, { children: e("Number of columns: {{columnCount}}", { columnCount: S[0].length }) }),
+						/* @__PURE__ */ Q(oe, { children: e("Number of data rows: {{rowCount}}", { rowCount: S.length - 1 }) })
 					]
 				}),
 				/* @__PURE__ */ Q(ye, {
-					formFieldDefinitions: J,
+					formFieldDefinitions: Y,
 					formId: s,
-					formMethods: z,
-					onSubmit: B(Y),
-					schema: L
+					formMethods: R,
+					onSubmit: z(le),
+					schema: ne
 				}),
-				/* @__PURE__ */ Q(Ve, { onProceedButtonClick: fe })
+				/* @__PURE__ */ Q(Ve, { onProceedButtonClick: de })
 			] })]
 		})
 	});
 }, Ue = /* @__PURE__ */ e(r(), 1), We = /* @__PURE__ */ e(o(), 1), Ge = () => {
-	let { t: e } = X(), n = b(), r = xe(), i = W(p), a = l(i, (e) => e.completeCaseType), o = l(i, (e) => e.rawData), s = l(i, (e) => e.fileName), c = l(i, (e) => e.goToNextStep), u = l(i, (e) => e.goToPreviousStep), d = l(i, (e) => e.setMappedColumns), f = ge([n, r]), _ = ue(), v = q(() => t.getColumnMappingSchema(o, a), [a, o]), y = q(() => t.getDefaultColumnMappingFormValues(o[0], i.getState().mappedColumns, r.options), [
+	let { t: e } = X(), n = v(), r = xe(), i = W(p), a = l(i, (e) => e.completeCaseType), o = l(i, (e) => e.rawData), s = l(i, (e) => e.fileName), c = l(i, (e) => e.goToNextStep), u = l(i, (e) => e.goToPreviousStep), d = l(i, (e) => e.setMappedColumns), f = me([n, r]), h = ce(), g = q(() => t.getColumnMappingSchema(o, a), [a, o]), _ = q(() => t.getDefaultColumnMappingFormValues(o[0], i.getState().mappedColumns, r.options), [
 		o,
 		i,
 		r.options
-	]), x = h({
-		defaultValues: { ...y },
-		resolver: g(v),
-		values: { ...y }
-	}), { clearErrors: S, control: C, handleSubmit: w } = x, T = m({ control: C }), E = q(() => t.getColumnMappingFormFieldDefinitions(a, o[0], s).map((e) => ({
+	]), y = _e({
+		defaultValues: { ..._ },
+		resolver: m(g),
+		values: { ..._ }
+	}), { clearErrors: b, control: x, handleSubmit: S } = y, C = ve({ control: x }), w = q(() => t.getColumnMappingFormFieldDefinitions(a, o[0], s).map((e) => ({
 		...e,
-		onChange: () => S()
+		onChange: () => b()
 	})), [
 		a,
 		o,
 		s,
-		S
+		b
 	]);
 	K(() => {
 		(async () => {
-			await d(t.getMappedColumnsFromFormData(T, o, n.map, a));
+			await d(t.getMappedColumnsFromFormData(C, o, n.map, a));
 		})();
 	}, [
 		d,
-		T,
+		C,
 		o,
 		n.map,
 		a
 	]);
-	let D = q(() => {
-		let e = o[0].map((e, t) => t), r = t.getMappedColumnsFromFormData(T, o, n.map, a).map((e) => e.originalIndex);
+	let T = q(() => {
+		let e = o[0].map((e, t) => t), r = t.getMappedColumnsFromFormData(C, o, n.map, a).map((e) => e.originalIndex);
 		return (0, We.default)(e, r).map((e) => ({
 			originalIndex: e,
 			originalLabel: o[0][e]
@@ -272,9 +272,9 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	}, [
 		n.map,
 		o,
-		T,
+		C,
 		a
-	]), O = G(async (e) => {
+	]), E = G(async (e) => {
 		await d(t.getMappedColumnsFromFormData(e, o, n.map, a)), await c();
 	}, [
 		o,
@@ -282,9 +282,9 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		c,
 		d,
 		a
-	]), k = q(() => t.getSampleIdColIds(a), [a]), A = G((t, n) => {
-		let i = parseInt(t.name, 10), a = (0, Ue.default)(o.slice(1).map((e) => e[i] ?? "")).filter((e) => !!e).slice(0, 5).join(", ").trim() || e("<no data>"), s = n, c = T[t.name];
-		return k.includes(c) && (s = /* @__PURE__ */ $(Z, { children: [/* @__PURE__ */ Q(I, { children: n }), /* @__PURE__ */ Q(I, {
+	]), D = q(() => t.getSampleIdColIds(a), [a]), O = G((t, n) => {
+		let i = parseInt(t.name, 10), a = (0, Ue.default)(o.slice(1).map((e) => e[i] ?? "")).filter((e) => !!e).slice(0, 5).join(", ").trim() || e("<no data>"), s = n, c = C[t.name];
+		return D.includes(c) && (s = /* @__PURE__ */ $(Z, { children: [/* @__PURE__ */ Q(I, { children: n }), /* @__PURE__ */ Q(I, {
 			sx: { marginTop: 1 },
 			children: /* @__PURE__ */ Q(Se, {
 				label: e("{{columnLabel}}: Identifier issuer", { columnLabel: t.label }),
@@ -292,48 +292,48 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 				name: c,
 				options: r.options
 			})
-		})] })), /* @__PURE__ */ $(ae, { children: [
-			/* @__PURE__ */ Q(U, { children: t.label }),
-			/* @__PURE__ */ Q(U, { children: s }),
-			/* @__PURE__ */ Q(U, { children: a })
+		})] })), /* @__PURE__ */ $(re, { children: [
+			/* @__PURE__ */ Q(H, { children: t.label }),
+			/* @__PURE__ */ Q(H, { children: s }),
+			/* @__PURE__ */ Q(H, { children: a })
 		] }, t.name);
 	}, [
-		T,
+		C,
 		r.isLoading,
 		r.options,
 		o,
-		k,
+		D,
 		e
-	]), j = G((t) => /* @__PURE__ */ $(V, {
+	]), k = G((t) => /* @__PURE__ */ $(B, {
 		size: "small",
-		children: [/* @__PURE__ */ Q(ie, {
+		children: [/* @__PURE__ */ Q(U, {
 			sx: {
 				backgroundColor: (e) => e.palette.background.paper,
 				position: "sticky",
 				top: 0,
 				zIndex: (e) => e.zIndex.appBar - 1
 			},
-			children: /* @__PURE__ */ $(ae, { children: [
-				/* @__PURE__ */ Q(U, {
+			children: /* @__PURE__ */ $(re, { children: [
+				/* @__PURE__ */ Q(H, {
 					sx: { width: "33%" },
 					children: e`Source`
 				}),
-				/* @__PURE__ */ Q(U, {
+				/* @__PURE__ */ Q(H, {
 					sx: { width: "33%" },
-					children: te.getInstance().config.applicationName
+					children: M.getInstance().config.applicationName
 				}),
-				/* @__PURE__ */ Q(U, {
+				/* @__PURE__ */ Q(H, {
 					sx: { width: "34%" },
 					children: e`Data preview (first 5 unique values)`
 				})
 			] })
-		}), /* @__PURE__ */ Q(H, { children: t })]
+		}), /* @__PURE__ */ Q(V, { children: t })]
 	}), [e]), ee = G(async () => {
-		await w(O)();
-	}, [w, O]), M = G(() => {
+		await S(E)();
+	}, [S, E]), A = G(() => {
 		u();
 	}, [u]);
-	return /* @__PURE__ */ Q(me, {
+	return /* @__PURE__ */ Q(fe, {
 		loadables: f,
 		children: /* @__PURE__ */ $(I, {
 			sx: {
@@ -342,24 +342,24 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 				height: "100%"
 			},
 			children: [
-				/* @__PURE__ */ Q(R, {
+				/* @__PURE__ */ Q(te, {
 					maxWidth: "lg",
 					sx: { marginBottom: 2 },
-					children: /* @__PURE__ */ $(P, {
-						severity: D.length === 0 ? "info" : "warning",
+					children: /* @__PURE__ */ $(N, {
+						severity: T.length === 0 ? "info" : "warning",
 						children: [
-							/* @__PURE__ */ Q(F, { children: D.length === 0 ? e("All columns in {{fileName}} have been mapped to known columns in {{applicationName}}", {
-								applicationName: te.getInstance().config.applicationName,
+							/* @__PURE__ */ Q(P, { children: T.length === 0 ? e("All columns in {{fileName}} have been mapped to known columns in {{applicationName}}", {
+								applicationName: M.getInstance().config.applicationName,
 								fileName: s
 							}) : e("{{numUnmappedColumns}} column(s) in {{fileName}} are not mapped", {
 								fileName: s,
-								numUnmappedColumns: D.length
+								numUnmappedColumns: T.length
 							}) }),
-							D.map((t) => /* @__PURE__ */ Q(I, { children: e("The column \"{{columnName}}\" (column {{columnIndex}}) has not been mapped.", {
+							T.map((t) => /* @__PURE__ */ Q(I, { children: e("The column \"{{columnName}}\" (column {{columnIndex}}) has not been mapped.", {
 								columnIndex: t.originalIndex + 1,
 								columnName: t.originalLabel
 							}) }, t.originalIndex)),
-							D.length === 0 && e("You can proceed to the next step.")
+							T.length === 0 && e("You can proceed to the next step.")
 						]
 					})
 				}),
@@ -376,19 +376,19 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 							right: 0,
 							top: 0
 						},
-						children: /* @__PURE__ */ Q(R, { children: /* @__PURE__ */ Q(ye, {
-							formFieldDefinitions: E,
-							formId: _,
-							formMethods: x,
-							onSubmit: w(O),
-							renderField: A,
-							schema: v,
-							wrapForm: j
+						children: /* @__PURE__ */ Q(te, { children: /* @__PURE__ */ Q(ye, {
+							formFieldDefinitions: w,
+							formId: h,
+							formMethods: y,
+							onSubmit: S(E),
+							renderField: O,
+							schema: g,
+							wrapForm: k
 						}) })
 					})
 				}),
 				/* @__PURE__ */ Q(I, { children: /* @__PURE__ */ Q(Ve, {
-					onGoBackButtonClick: M,
+					onGoBackButtonClick: A,
 					onProceedButtonClick: ee
 				}) })
 			]
@@ -404,7 +404,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		children: n && /* @__PURE__ */ Q(e, { ...t })
 	});
 }, qe = Ne(({ onActionsChange: e, onClose: t, onSubmit: n, onTitleChange: r, openProps: i }) => {
-	let { t: a } = X(), o = ue(), s = q(() => i.completeCaseType.cols[i.colId], [i.completeCaseType.cols, i.colId]);
+	let { t: a } = X(), o = ce(), s = q(() => i.completeCaseType.cols[i.colId], [i.completeCaseType.cols, i.colId]);
 	K(() => {
 		r(a("Edit values for {{colLabel}} (for selected rows)", { colLabel: s.label }));
 	}, [
@@ -415,7 +415,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	let l = q(() => c.createYupSchema({
 		completeCaseType: i.completeCaseType,
 		includedColIds: [i.colId]
-	}), [i.completeCaseType, i.colId]), u = h({ resolver: g(l) }), { handleSubmit: d } = u, { fieldDefinitions: f } = q(() => c.createFormDefinitions({
+	}), [i.completeCaseType, i.colId]), u = _e({ resolver: m(l) }), { handleSubmit: d } = u, { fieldDefinitions: f } = q(() => c.createFormDefinitions({
 		completeCaseType: i.completeCaseType,
 		includedColIds: [i.colId]
 	}), [i.completeCaseType, i.colId]), p = G((e) => {
@@ -440,9 +440,9 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		a
 	]), /* @__PURE__ */ $(I, { children: [i.shouldShowRightsWarning && /* @__PURE__ */ Q(I, {
 		sx: { marginBottom: 2 },
-		children: /* @__PURE__ */ $(P, {
+		children: /* @__PURE__ */ $(N, {
 			severity: "warning",
-			children: [/* @__PURE__ */ Q(F, { children: a`You do not have the necessary rights to edit all rows in this column.` }), a`Only the cases that you have write access to for this column will be updated. Please review the changes carefully before submitting.`]
+			children: [/* @__PURE__ */ Q(P, { children: a`You do not have the necessary rights to edit all rows in this column.` }), a`Only the cases that you have write access to for this column will be updated. Please review the changes carefully before submitting.`]
 		})
 	}), /* @__PURE__ */ Q(ye, {
 		formFieldDefinitions: f,
@@ -457,14 +457,14 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	maxWidth: "md",
 	testId: "UploadEditColumnValuesDialog"
 }), Je = ({ caseRightsColMap: e, caseUploadResults: t, completeCaseType: n, getOriginalCellValue: r, onCaseContentEditSubmit: i, onColContentEditSubmit: o, tableStore: s }) => {
-	let c = le(), { t: l } = X(), u = J(null), d = J(null), f = q(() => [
-		k.UNAUTHORIZED,
-		k.INVALID,
-		k.CONFLICT,
-		k.MISSING,
-		k.DERIVED,
-		k.TRANSFORMED
-	], []), p = q(() => [k.UNAUTHORIZED, k.INVALID], []), m = q(() => [k.MISSING, k.CONFLICT], []), h = G((r) => {
+	let c = se(), { t: l } = X(), u = J(null), d = J(null), f = q(() => [
+		D.UNAUTHORIZED,
+		D.INVALID,
+		D.CONFLICT,
+		D.MISSING,
+		D.DERIVED,
+		D.TRANSFORMED
+	], []), p = q(() => [D.UNAUTHORIZED, D.INVALID], []), m = q(() => [D.MISSING, D.CONFLICT], []), h = G((r) => {
 		d.current?.open({
 			colId: r.column.id,
 			completeCaseType: n,
@@ -501,16 +501,16 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			sx: { marginTop: +(n > 0) },
 			children: t
 		}, e)) });
-	}, [v]), b = G((e) => v(e).map((e) => e.message).join(", "), [v]), x = G((e, t, n) => t.filter((t) => !(t.col_id !== e || t.data_issue_type === k.TRANSFORMED && t.original_value === n)).sort((e, t) => f.indexOf(e.data_issue_type) - f.indexOf(t.data_issue_type)), [f]), C = G(() => /* @__PURE__ */ Q(se, {
+	}, [v]), x = G((e) => v(e).map((e) => e.message).join(", "), [v]), S = G((e, t, n) => t.filter((t) => !(t.col_id !== e || t.data_issue_type === D.TRANSFORMED && t.original_value === n)).sort((e, t) => f.indexOf(e.data_issue_type) - f.indexOf(t.data_issue_type)), [f]), C = G(() => /* @__PURE__ */ Q(ae, {
 		"aria-hidden": !1,
 		arrow: !0,
 		title: l("Indicates if there are any issues with the case"),
 		children: /* @__PURE__ */ Q(Ee, { fontSize: "small" })
 	}), [l]), w = G(({ row: e }) => {
-		let t = e.data_issues.filter((e) => e.data_issue_type === k.INVALID || e.data_issue_type === k.UNAUTHORIZED);
-		if (t.length > 0) return /* @__PURE__ */ Q(se, {
+		let t = e.data_issues.filter((e) => e.data_issue_type === D.INVALID || e.data_issue_type === D.UNAUTHORIZED);
+		if (t.length > 0) return /* @__PURE__ */ Q(ae, {
 			"aria-hidden": !1,
-			"aria-label": b(t),
+			"aria-label": x(t),
 			arrow: !0,
 			title: y(t),
 			children: /* @__PURE__ */ Q(Ee, {
@@ -523,9 +523,9 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		});
 	}, [
 		y,
-		b,
+		x,
 		c.palette.error.main
-	]), T = G(() => /* @__PURE__ */ Q(se, {
+	]), T = G(() => /* @__PURE__ */ Q(ae, {
 		"aria-hidden": !1,
 		arrow: !0,
 		title: l("Indicates if case is new (will be created)"),
@@ -538,8 +538,8 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			marginTop: "5px",
 			position: "absolute"
 		}
-	}), [l]), D = G(({ id: e, row: t }) => {
-		let r = a.getRowValue(t.validated_content, n.cols[e], n).long, i = x(e, t.data_issues, r);
+	}), [l]), O = G(({ id: e, row: t }) => {
+		let r = a.getRowValue(t.validated_content, n.cols[e], n).long, i = S(e, t.data_issues, r);
 		if (i.length === 0) return /* @__PURE__ */ Q(Z, { children: r });
 		let o = c.palette.info.main;
 		p.includes(i[0].data_issue_type) ? o = c.palette.error.main : m.includes(i[0].data_issue_type) && (o = c.palette.warning.main);
@@ -558,7 +558,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 					position: "relative",
 					width: c.spacing(2)
 				},
-				children: /* @__PURE__ */ Q(se, {
+				children: /* @__PURE__ */ Q(ae, {
 					arrow: !0,
 					title: y(i),
 					children: /* @__PURE__ */ Q(Ee, {
@@ -582,11 +582,11 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	}, [
 		n,
 		p,
-		x,
+		S,
 		y,
 		c,
 		m
-	]), O = q(() => {
+	]), k = q(() => {
 		let i = [];
 		if (!t?.length) return i;
 		i.push(je.createReadableIndexColumn()), i.push(je.createSelectableColumn()), i.push({
@@ -621,7 +621,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			Object.keys(e.validated_content || {}).forEach((e) => o.add(e)), e.data_issues.forEach((e) => o.add(e.col_id));
 		}), n.ordered_col_ids.forEach((s) => {
 			if (!o.has(s)) return;
-			let c = n.cols[s], u = t.flatMap((e) => e.data_issues.filter((e) => e.col_id === c.id)), d = u.length === 0 || u.some((e) => e.data_issue_type !== k.DERIVED), f = e[c.id]?.length;
+			let c = n.cols[s], u = t.flatMap((e) => e.data_issues.filter((e) => e.col_id === c.id)), d = u.length === 0 || u.some((e) => e.data_issue_type !== D.DERIVED), f = e[c.id]?.length;
 			c && i.push({
 				cellTitleGetter: (e) => {
 					let t = e.row.data_issues.find((e) => e.col_id === c.id);
@@ -643,7 +643,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 				hideInFilter: !0,
 				id: c.id,
 				isInitiallyVisible: d,
-				renderCell: D,
+				renderCell: O,
 				type: "text",
 				valueGetter: (e) => a.getRowValue(e.row.validated_content, c, n).short,
 				widthPx: 250
@@ -659,7 +659,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		}), i.push(je.createActionsColumn({
 			getActions: (e) => {
 				let t = [];
-				return t.push(/* @__PURE__ */ $(re, {
+				return t.push(/* @__PURE__ */ $(z, {
 					onClick: () => {
 						u.current?.open({
 							caseContent: e.row.validated_content,
@@ -669,7 +669,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 							formId: "edit-case-form"
 						});
 					},
-					children: [/* @__PURE__ */ Q(z, { children: /* @__PURE__ */ Q(Te, {}) }), /* @__PURE__ */ Q(B, { children: l`Edit` })]
+					children: [/* @__PURE__ */ Q(ne, { children: /* @__PURE__ */ Q(Te, {}) }), /* @__PURE__ */ Q(R, { children: l`Edit` })]
 				}, "editCase")), t;
 			},
 			t: l
@@ -684,11 +684,11 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		l,
 		e,
 		h,
-		D,
+		O,
 		r
 	]);
 	return Me({
-		columns: O,
+		columns: k,
 		createFiltersFromColumns: !0,
 		rows: t,
 		store: s
@@ -698,7 +698,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			float: "right"
 		} } }) }),
 		/* @__PURE__ */ Q(Oe, { font: c["gen-epix-ui-client-casedb"].lineList.font }),
-		/* @__PURE__ */ Q(S, {
+		/* @__PURE__ */ Q(b, {
 			onSubmit: g,
 			ref: u
 		}),
@@ -708,7 +708,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		})
 	] });
 }, Ye = ({ onGoBackButtonClick: e, onProceedButtonClick: t }) => {
-	let { t: n } = X(), r = pe(), i = W(p), a = l(i, (e) => e.completeCaseType), o = l(r, (e) => e.selectedIds), s = !o.length || o.length > a.props.create_max_n_cases;
+	let { t: n } = X(), r = de(), i = W(p), a = l(i, (e) => e.completeCaseType), o = l(r, (e) => e.selectedIds), s = !o.length || o.length > a.props.create_max_n_cases;
 	return /* @__PURE__ */ Q(Ve, {
 		onGoBackButtonClick: e,
 		onProceedButtonClick: t,
@@ -719,11 +719,11 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	let { t } = X(), n = W(p), r = l(n, (e) => e.goToNextStep), i = l(n, (e) => e.goToPreviousStep), o = l(n, (e) => e.completeCaseType), s = l(n, (e) => e.casesForVerificationFromSourceData), c = l(n, (e) => e.createdInDataCollectionId), u = l(n, (e) => e.validateCasesQueryKey), f = l(n, (e) => e.caseRightsColMap), [m, h] = Y(!1), [g, _] = Y(!1), [v, y] = Y(null), b = J([]), x = J(null), S = J(null), C = G((e, t, n) => s[t.rowIndex]?.case?.content[e.id] ?? "", [s]), w = be({
 		enabled: s.length > 0,
 		gcTime: Infinity,
-		queryFn: async ({ signal: t }) => (await O.getInstance().uploadCases(M.deepNullifyEmptyStrings({
+		queryFn: async ({ signal: t }) => (await E.getInstance().uploadCases(A.deepNullifyEmptyStrings({
 			case_batch: { cases: s },
 			case_type_id: e,
 			default_created_in_data_collection_id: c ?? void 0,
-			on_exists: j.UPDATE,
+			on_exists: k.UPDATE,
 			verify_only: !0
 		}), { signal: t })).data,
 		queryKey: u,
@@ -732,10 +732,10 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			id: s[t].id
 		})),
 		staleTime: Infinity
-	}), T = ge([w]), E = q(() => fe({ idSelectorCallback: (e) => e.id }), []), D = l(E, d((e) => e.setSelectedIds)), N = G(async (t) => {
+	}), T = me([w]), j = q(() => ue({ idSelectorCallback: (e) => e.id }), []), M = l(j, d((e) => e.setSelectedIds)), F = G(async (t) => {
 		_(!0);
 		try {
-			let n = (await O.getInstance().uploadCases(M.deepNullifyEmptyStrings({
+			let n = (await E.getInstance().uploadCases(A.deepNullifyEmptyStrings({
 				case_batch: { cases: t.map(({ content: e, row: t }, n) => {
 					let r = s.find((e) => e.id === t.id);
 					return { case: {
@@ -752,7 +752,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 				}) },
 				case_type_id: e,
 				default_created_in_data_collection_id: c ?? void 0,
-				on_exists: j.UPDATE,
+				on_exists: k.UPDATE,
 				verify_only: !0
 			}))).data, r = new Map(t.map(({ row: e }, t) => [e.id, n.cases[t]]));
 			ee.getInstance().queryClient.setQueryData(u, { cases: w.data.map((e) => {
@@ -765,10 +765,10 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			let i = [];
 			if (t.forEach(({ row: e }, t) => {
 				let r = n.cases[t];
-				r.status !== A.SKIPPED && r.status !== A.SUCCESS && r.status !== A.UPDATED && (b.current.includes(e.id) || (b.current.push(e.id), i.push(e.id)));
+				r.status !== O.SKIPPED && r.status !== O.SUCCESS && r.status !== O.UPDATED && (b.current.includes(e.id) || (b.current.push(e.id), i.push(e.id)));
 			}), i.length > 0) {
-				let e = E.getState().selectedIds, t = i.filter((t) => !e.includes(t));
-				t.length > 0 && D([...e, ...t]);
+				let e = j.getState().selectedIds, t = i.filter((t) => !e.includes(t));
+				t.length > 0 && M([...e, ...t]);
 			}
 		} catch (e) {
 			y(e);
@@ -781,12 +781,12 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		s,
 		o,
 		c,
-		D,
-		E,
+		M,
+		j,
 		u
-	]), te = G(async (e) => {
-		let t = E.getState().selectedIds;
-		await N(w.data.filter((e) => t.includes(e.id)).map((t) => ({
+	]), L = G(async (e) => {
+		let t = j.getState().selectedIds;
+		await F(w.data.filter((e) => t.includes(e.id)).map((t) => ({
 			content: {
 				...t.validated_content,
 				...e[t.id]
@@ -795,17 +795,17 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		})));
 	}, [
 		w.data,
-		N,
-		E
-	]), ne = G(async (e, t) => {
+		F,
+		j
+	]), te = G(async (e, t) => {
 		let n = w.data.find((t) => t.id === e);
-		await N([{
+		await F([{
 			content: t,
 			row: n
 		}]);
-	}, [w.data, N]);
+	}, [w.data, F]);
 	K(() => {
-		let e = E.subscribe((e, t) => {
+		let e = j.subscribe((e, t) => {
 			if (e.selectedIds === t.selectedIds) return;
 			b.current = e.selectedIds;
 			let n = e.selectedIds.length > o.props.create_max_n_cases;
@@ -814,12 +814,12 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		return () => {
 			e();
 		};
-	}, [o.props.create_max_n_cases, E]), K(() => {
-		let e = (w.data ?? []).filter((e) => !e.data_issues.some((e) => e.data_issue_type === k.INVALID || e.data_issue_type === k.UNAUTHORIZED)).map((e) => e.id);
-		D(e);
-	}, [w.data, D]);
-	let L = G(async () => {
-		let e = E.getState().selectedIds, t = w.data.filter((t) => e.includes(t.id) && !t.data_issues.some((e) => e.data_issue_type === k.INVALID));
+	}, [o.props.create_max_n_cases, j]), K(() => {
+		let e = (w.data ?? []).filter((e) => !e.data_issues.some((e) => e.data_issue_type === D.INVALID || e.data_issue_type === D.UNAUTHORIZED)).map((e) => e.id);
+		M(e);
+	}, [w.data, M]);
+	let ne = G(async () => {
+		let e = j.getState().selectedIds, t = w.data.filter((t) => e.includes(t.id) && !t.data_issues.some((e) => e.data_issue_type === D.INVALID));
 		n.setState((e) => ({
 			...e,
 			selectedIdsForUpload: t.map((e) => e.id),
@@ -829,7 +829,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		w.data,
 		r,
 		n,
-		E
+		j
 	]), R = G(async () => {
 		n.setState((e) => ({
 			...e,
@@ -841,11 +841,11 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		w.data,
 		n
 	]), z = G(async () => {
-		if (w.data.some((e) => E.getState().selectedIds.includes(e.id) && (e.data_issues.some((e) => e.data_issue_type === k.INVALID) || e.status === A.FAILED))) {
+		if (w.data.some((e) => j.getState().selectedIds.includes(e.id) && (e.data_issues.some((e) => e.data_issue_type === D.INVALID) || e.status === O.FAILED))) {
 			x.current?.open();
 			return;
 		}
-		if (w.data.some((e) => !E.getState().selectedIds.includes(e.id) && !e.data_issues.some((e) => e.data_issue_type === k.INVALID))) {
+		if (w.data.some((e) => !j.getState().selectedIds.includes(e.id) && !e.data_issues.some((e) => e.data_issue_type === D.INVALID))) {
 			S.current?.open();
 			return;
 		}
@@ -853,7 +853,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	}, [
 		w.data,
 		R,
-		E
+		j
 	]), B = G(() => {
 		i();
 	}, [i]);
@@ -866,9 +866,9 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			width: "100%"
 		},
 		children: [
-			/* @__PURE__ */ Q(de, {
-				store: E,
-				children: /* @__PURE__ */ $(me, {
+			/* @__PURE__ */ Q(le, {
+				store: j,
+				children: /* @__PURE__ */ $(fe, {
 					error: v,
 					inlineSpinner: !0,
 					loadables: T,
@@ -877,9 +877,9 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 					children: [
 						m && /* @__PURE__ */ Q(I, {
 							sx: { marginY: 2 },
-							children: /* @__PURE__ */ Q(P, {
+							children: /* @__PURE__ */ Q(N, {
 								severity: "error",
-								children: /* @__PURE__ */ Q(F, { children: t("You have exceeded the maximum number of {{maxCases}} cases for this case type. Please reduce the number of selected cases before proceeding.", { maxCases: o.props.create_max_n_cases }) })
+								children: /* @__PURE__ */ Q(P, { children: t("You have exceeded the maximum number of {{maxCases}} cases for this case type. Please reduce the number of selected cases before proceeding.", { maxCases: o.props.create_max_n_cases }) })
 							})
 						}),
 						/* @__PURE__ */ Q(Je, {
@@ -887,9 +887,9 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 							caseUploadResults: w.data || [],
 							completeCaseType: o,
 							getOriginalCellValue: C,
-							onCaseContentEditSubmit: ne,
-							onColContentEditSubmit: te,
-							tableStore: E
+							onCaseContentEditSubmit: te,
+							onColContentEditSubmit: L,
+							tableStore: j
 						}),
 						/* @__PURE__ */ Q(Ye, {
 							onGoBackButtonClick: B,
@@ -906,7 +906,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 				body: t`Some of the selected cases contain issues. If you proceed, these cases will be excluded. Are you sure you want to proceed without them?`,
 				cancelLabel: t`Cancel`,
 				confirmLabel: t`Proceed`,
-				onConfirm: L,
+				onConfirm: ne,
 				ref: x,
 				title: t`Issues found with selected cases`
 			}),
@@ -963,22 +963,22 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		f,
 		g
 	]);
-	let A = G(async () => {
+	let ee = G(async () => {
 		await i();
-	}, [i]), j = G(() => {
+	}, [i]), A = G(() => {
 		C(!0);
-	}, []), ee = G(() => {
+	}, []), j = G(() => {
 		a();
 	}, [a]), M = G(async () => {
 		let e = n.createCaseTypeLink(_);
 		await ze.getInstance().router.navigate(e);
-	}, [_]), N;
-	return N = E ? /* @__PURE__ */ $(I, { children: [E instanceof s && /* @__PURE__ */ $(P, {
+	}, [_]), F;
+	return F = E ? /* @__PURE__ */ $(I, { children: [E instanceof s && /* @__PURE__ */ $(N, {
 		severity: "error",
-		children: [/* @__PURE__ */ Q(F, { children: e("Failed to create cases during upload.") }), e("An error occurred while creating cases. Please try again or contact support if the issue persists. Cases may have been partially created. No files were uploaded.")]
-	}), /* @__PURE__ */ Q(Ie, { error: E })] }) : w ? /* @__PURE__ */ $(I, { children: [/* @__PURE__ */ Q(I, { children: /* @__PURE__ */ Q(P, {
+		children: [/* @__PURE__ */ Q(P, { children: e("Failed to create cases during upload.") }), e("An error occurred while creating cases. Please try again or contact support if the issue persists. Cases may have been partially created. No files were uploaded.")]
+	}), /* @__PURE__ */ Q(Ie, { error: E })] }) : w ? /* @__PURE__ */ $(I, { children: [/* @__PURE__ */ Q(I, { children: /* @__PURE__ */ Q(N, {
 		severity: "success",
-		children: /* @__PURE__ */ Q(F, { children: e("Upload completed.") })
+		children: /* @__PURE__ */ Q(P, { children: e("Upload completed.") })
 	}) }), /* @__PURE__ */ Q(I, {
 		sx: {
 			display: "flex",
@@ -992,7 +992,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			variant: "contained",
 			children: h
 		}) : /* @__PURE__ */ $(Z, { children: [/* @__PURE__ */ Q(L, {
-			onClick: A,
+			onClick: ee,
 			variant: "outlined",
 			children: e("Upload more cases")
 		}), /* @__PURE__ */ Q(L, {
@@ -1003,9 +1003,9 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	})] }) : S ? /* @__PURE__ */ $(I, { children: [
 		/* @__PURE__ */ Q(I, {
 			sx: { marginBottom: 4 },
-			children: /* @__PURE__ */ $(P, {
+			children: /* @__PURE__ */ $(N, {
 				severity: "info",
-				children: [/* @__PURE__ */ Q(F, { children: e("Uploading cases and files.") }), e("Please wait while the cases and associated files are being uploaded. This may take a while depending on the number and size of the files being uploaded.")]
+				children: [/* @__PURE__ */ Q(P, { children: e("Uploading cases and files.") }), e("Please wait while the cases and associated files are being uploaded. This may take a while depending on the number and size of the files being uploaded.")]
 			})
 		}),
 		/* @__PURE__ */ Q(I, {
@@ -1022,161 +1022,161 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	] }) : /* @__PURE__ */ $(I, { children: [/* @__PURE__ */ $(I, { children: [
 		/* @__PURE__ */ Q(I, {
 			sx: { marginY: 2 },
-			children: /* @__PURE__ */ Q(P, {
+			children: /* @__PURE__ */ Q(N, {
 				severity: "info",
-				children: /* @__PURE__ */ Q(F, { children: e("{{numCases}} cases are ready to be uploaded.", { numCases: k.length }) })
+				children: /* @__PURE__ */ Q(P, { children: e("{{numCases}} cases are ready to be uploaded.", { numCases: k.length }) })
 			})
 		}),
 		O.mappedSequenceFiles.length > 0 && /* @__PURE__ */ Q(I, {
 			sx: { marginY: 2 },
-			children: /* @__PURE__ */ Q(P, {
+			children: /* @__PURE__ */ Q(N, {
 				severity: "info",
-				children: /* @__PURE__ */ Q(F, { children: e("{{numSequenceFiles}} genome files are ready to be uploaded.", { numSequenceFiles: O.mappedSequenceFiles.length }) })
+				children: /* @__PURE__ */ Q(P, { children: e("{{numSequenceFiles}} genome files are ready to be uploaded.", { numSequenceFiles: O.mappedSequenceFiles.length }) })
 			})
 		}),
 		O.mappedReadsFiles.length > 0 && /* @__PURE__ */ Q(I, {
 			sx: { marginY: 2 },
-			children: /* @__PURE__ */ Q(P, {
+			children: /* @__PURE__ */ Q(N, {
 				severity: "info",
-				children: /* @__PURE__ */ Q(F, { children: e("{{numReadsFiles}} reads files are ready to be uploaded.", { numReadsFiles: O.mappedReadsFiles.length }) })
+				children: /* @__PURE__ */ Q(P, { children: e("{{numReadsFiles}} reads files are ready to be uploaded.", { numReadsFiles: O.mappedReadsFiles.length }) })
 			})
 		}),
 		u.length - k.length > 0 && /* @__PURE__ */ Q(I, {
 			sx: { marginY: 2 },
-			children: /* @__PURE__ */ Q(P, {
+			children: /* @__PURE__ */ Q(N, {
 				severity: "warning",
-				children: /* @__PURE__ */ Q(F, { children: e("{{numCases}} cases were not selected and will not be uploaded.", { numCases: u.length - k.length }) })
+				children: /* @__PURE__ */ Q(P, { children: e("{{numCases}} cases were not selected and will not be uploaded.", { numCases: u.length - k.length }) })
 			})
 		}),
 		O.unmappedSequenceFiles.length > 0 && /* @__PURE__ */ Q(I, {
 			sx: { marginY: 2 },
-			children: /* @__PURE__ */ Q(P, {
+			children: /* @__PURE__ */ Q(N, {
 				severity: "warning",
-				children: /* @__PURE__ */ Q(F, { children: e("{{unmappedSequenceFiles}} unmapped genome files will not be uploaded.", { unmappedSequenceFiles: O.unmappedSequenceFiles.length }) })
+				children: /* @__PURE__ */ Q(P, { children: e("{{unmappedSequenceFiles}} unmapped genome files will not be uploaded.", { unmappedSequenceFiles: O.unmappedSequenceFiles.length }) })
 			})
 		}),
 		O.unmappedReadsFiles.length > 0 && /* @__PURE__ */ Q(I, {
 			sx: { marginY: 2 },
-			children: /* @__PURE__ */ Q(P, {
+			children: /* @__PURE__ */ Q(N, {
 				severity: "warning",
-				children: /* @__PURE__ */ Q(F, { children: e("{{unmappedReadsFiles}} unmapped reads files will not be uploaded.", { unmappedReadsFiles: O.unmappedReadsFiles.length }) })
+				children: /* @__PURE__ */ Q(P, { children: e("{{unmappedReadsFiles}} unmapped reads files will not be uploaded.", { unmappedReadsFiles: O.unmappedReadsFiles.length }) })
 			})
 		})
 	] }), /* @__PURE__ */ Q(Ve, {
-		onGoBackButtonClick: ee,
-		onProceedButtonClick: j,
+		onGoBackButtonClick: j,
+		onProceedButtonClick: A,
 		proceedLabel: "Start upload"
-	})] }), /* @__PURE__ */ Q(R, {
+	})] }), /* @__PURE__ */ Q(te, {
 		maxWidth: "xl",
 		sx: { height: "100%" },
-		children: N
+		children: F
 	});
-}, Qe = (e) => Array.from(e?.files ?? []), $e = ({ hasGenomeFiles: e, hasReadsFiles: t, hasSelectedFiles: n }) => E().shape({
-	assemblyProtocolId: e ? D().uuid4().required() : D().nullable().notRequired(),
-	sampleIdColId: n ? D().uuid4().required() : D().nullable().notRequired(),
-	sequencingProtocolId: t ? D().uuid4().required() : D().nullable().notRequired()
+}, Qe = (e) => Array.from(e?.files ?? []), $e = ({ hasGenomeFiles: e, hasReadsFiles: t, hasSelectedFiles: n }) => w().shape({
+	assemblyProtocolId: e ? T().uuid4().required() : T().nullable().notRequired(),
+	sampleIdColId: n ? T().uuid4().required() : T().nullable().notRequired(),
+	sequencingProtocolId: t ? T().uuid4().required() : T().nullable().notRequired()
 }), et = () => {
-	let { t: e } = X(), n = le(), r = W(p), i = l(r, (e) => e.completeCaseType), a = l(r, (e) => e.mappedColumns), o = l(r, (e) => e.validatedCases), s = l(r, (e) => e.goToNextStep), c = l(r, (e) => e.goToPreviousStep), u = l(r, (e) => e.setSequenceFilesDataTransfer), d = l(r, (e) => e.sampleIdColId), f = l(r, (e) => e.sequenceFilesDataTransfer), [m, _] = Y(f), v = ue(), y = C(), b = w(), x = ge([y, b]), S = q(() => a.filter((e) => e.isSampleIdColumn).map((e) => ({
+	let { t: e } = X(), n = se(), r = W(p), i = l(r, (e) => e.completeCaseType), a = l(r, (e) => e.mappedColumns), o = l(r, (e) => e.validatedCases), s = l(r, (e) => e.goToNextStep), c = l(r, (e) => e.goToPreviousStep), u = l(r, (e) => e.setSequenceFilesDataTransfer), d = l(r, (e) => e.sampleIdColId), f = l(r, (e) => e.sequenceFilesDataTransfer), [h, g] = Y(f), _ = ce(), v = x(), y = S(), b = me([v, y]), C = q(() => a.filter((e) => e.isSampleIdColumn).map((e) => ({
 		label: e.col.label,
 		value: e.col.id
-	})), [a]), T = q(() => Qe(m), [m]), E = T.length > 0, D = q(() => T.some((e) => t.isGenomeFile(e.name)), [T]), O = q(() => T.some((e) => t.isReadsFile(e.name)), [T]), k = q(() => $e({
-		hasGenomeFiles: D,
-		hasReadsFiles: O,
-		hasSelectedFiles: E
+	})), [a]), w = q(() => Qe(h), [h]), T = w.length > 0, E = q(() => w.some((e) => t.isGenomeFile(e.name)), [w]), D = q(() => w.some((e) => t.isReadsFile(e.name)), [w]), O = q(() => $e({
+		hasGenomeFiles: E,
+		hasReadsFiles: D,
+		hasSelectedFiles: T
 	}), [
+		E,
 		D,
-		O,
-		E
-	]), A = q(() => ({
+		T
+	]), k = q(() => ({
 		assemblyProtocolId: r.getState().assemblyProtocolId ?? null,
 		sampleIdColId: r.getState().sampleIdColId ?? null,
 		sequencingProtocolId: r.getState().sequencingProtocolId ?? null
-	}), [r]), j = h({
-		defaultValues: A,
-		resolver: g(k),
-		values: A
-	}), { handleSubmit: ee, setValue: M } = j;
+	}), [r]), ee = _e({
+		defaultValues: k,
+		resolver: m(O),
+		values: k
+	}), { handleSubmit: A, setValue: M } = ee;
 	K(() => {
-		y.isLoading || b.isLoading || (r.getState().sequencingProtocolId || (M("sequencingProtocolId", y.options[0]?.value || null), r.setState({ sequencingProtocolId: y.options[0]?.value || null })), r.getState().assemblyProtocolId || (M("assemblyProtocolId", b.options[0]?.value || null), r.setState({ assemblyProtocolId: b.options[0]?.value || null })), r.getState().sampleIdColId || (M("sampleIdColId", S[0]?.value || null), r.setState({ sampleIdColId: S[0]?.value || null })));
+		v.isLoading || y.isLoading || (r.getState().sequencingProtocolId || (M("sequencingProtocolId", v.options[0]?.value || null), r.setState({ sequencingProtocolId: v.options[0]?.value || null })), r.getState().assemblyProtocolId || (M("assemblyProtocolId", y.options[0]?.value || null), r.setState({ assemblyProtocolId: y.options[0]?.value || null })), r.getState().sampleIdColId || (M("sampleIdColId", C[0]?.value || null), r.setState({ sampleIdColId: C[0]?.value || null })));
 	}, [
-		b.isLoading,
-		b.options,
 		y.isLoading,
 		y.options,
+		v.isLoading,
+		v.options,
 		M,
 		r,
-		S
+		C
 	]);
-	let te = G((e) => {
+	let F = G((e) => {
 		r.setState({ sequencingProtocolId: e });
-	}, [r]), ne = G((e) => {
-		r.setState({ assemblyProtocolId: e });
 	}, [r]), L = G((e) => {
+		r.setState({ assemblyProtocolId: e });
+	}, [r]), te = G((e) => {
 		r.setState({ sampleIdColId: e });
-	}, [r]), R = q(() => [
+	}, [r]), ne = q(() => [
 		{
-			definition: N.SELECT,
+			definition: j.SELECT,
 			label: e`Genome files: assembly protocol`,
-			loading: b.isLoading,
+			loading: y.isLoading,
 			name: "assemblyProtocolId",
-			onChange: ne,
-			options: b.options
+			onChange: L,
+			options: y.options
 		},
 		{
-			definition: N.SELECT,
+			definition: j.SELECT,
 			label: e`Reads files: sequencing protocol`,
-			loading: y.isLoading,
+			loading: v.isLoading,
 			name: "sequencingProtocolId",
-			onChange: te,
-			options: y.options
+			onChange: F,
+			options: v.options
 		},
 		{
-			definition: N.SELECT,
+			definition: j.SELECT,
 			label: e`Sample ID column`,
 			name: "sampleIdColId",
-			onChange: L,
-			options: S
+			onChange: te,
+			options: C
 		}
 	], [
-		b.isLoading,
-		b.options,
-		ne,
-		L,
-		te,
-		S,
 		y.isLoading,
 		y.options,
+		L,
+		te,
+		F,
+		C,
+		v.isLoading,
+		v.options,
 		e
-	]), z = q(() => a.some((e) => e.isSampleIdColumn && e.sampleIdentifierIssuerId), [a]), B = q(() => d ? o.some((e) => e.validated_content[d]?.trim().length > 0) : !1, [d, o]), re = q(() => t.getCompleteCaseTypeColStats(i), [i]), V = q(() => re.sequenceColumns.length > 0, [re]), H = q(() => re.readsColumns.length > 0, [re]), U = q(() => z && B && (V || H), [
+	]), R = q(() => a.some((e) => e.isSampleIdColumn && e.sampleIdentifierIssuerId), [a]), z = q(() => d ? o.some((e) => e.validated_content[d]?.trim().length > 0) : !1, [d, o]), B = q(() => t.getCompleteCaseTypeColStats(i), [i]), V = q(() => B.sequenceColumns.length > 0, [B]), H = q(() => B.readsColumns.length > 0, [B]), U = q(() => R && z && (V || H), [
+		R,
 		z,
-		B,
 		V,
 		H
-	]), ie = q(() => {
+	]), re = q(() => {
 		let e = "";
 		return V && (e += ".fa,.fasta,.fa.gz,.fasta.gz,"), H && (e += ".fq,.fastq,.fq.gz,.fastq.gz,"), e;
-	}, [H, V]), ae = G(async () => {
-		u(U ? m : new DataTransfer()), await ee(async () => {
+	}, [H, V]), ie = G(async () => {
+		u(U ? h : new DataTransfer()), await A(async () => {
 			await s();
 		})();
 	}, [
 		U,
-		m,
+		h,
 		s,
-		ee,
+		A,
 		u
-	]), oe = G(() => {
+	]), ae = G(() => {
 		c();
-	}, [c]), se = G((e) => {
-		_(e), u(e);
-	}, [u]), ce = G((e) => /* @__PURE__ */ Q(I, {
+	}, [c]), oe = G((e) => {
+		g(e), u(e);
+	}, [u]), J = G((e) => /* @__PURE__ */ Q(I, {
 		sx: {
 			display: "grid",
 			gap: n.spacing(1),
 			gridTemplateColumns: "1fr 1fr 1fr"
 		},
 		children: e
-	}), [n]), J = q(() => z ? B ? H ? V ? null : {
+	}), [n]), le = q(() => R ? z ? H ? V ? null : {
 		message: e`The selected case type does not support uploading sequence files.`,
 		title: e("Uploading of sequence files is disabled.")
 	} : {
@@ -1191,12 +1191,12 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	}, [
 		H,
 		V,
-		B,
 		z,
+		R,
 		e
-	]), de = G(() => {}, []);
-	return /* @__PURE__ */ Q(me, {
-		loadables: x,
+	]), ue = G(() => {}, []);
+	return /* @__PURE__ */ Q(fe, {
+		loadables: b,
 		children: /* @__PURE__ */ $(I, {
 			sx: {
 				display: "grid",
@@ -1207,9 +1207,9 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			children: [
 				!U && /* @__PURE__ */ Q(I, {
 					sx: { marginBottom: 2 },
-					children: /* @__PURE__ */ $(P, {
+					children: /* @__PURE__ */ $(N, {
 						severity: "error",
-						children: [/* @__PURE__ */ Q(F, { children: J.title }), J.message]
+						children: [/* @__PURE__ */ Q(P, { children: le.title }), le.message]
 					})
 				}),
 				/* @__PURE__ */ $(I, {
@@ -1218,26 +1218,26 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 						/* @__PURE__ */ Q(I, {
 							sx: { maxWidth: n.spacing(128) },
 							children: /* @__PURE__ */ Q(ye, {
-								formFieldDefinitions: R,
-								formId: v,
-								formMethods: j,
-								onSubmit: de,
-								schema: k,
-								wrapForm: ce
+								formFieldDefinitions: ne,
+								formId: _,
+								formMethods: ee,
+								onSubmit: ue,
+								schema: O,
+								wrapForm: J
 							})
 						}),
 						!V && /* @__PURE__ */ Q(I, {
 							sx: { marginY: 1 },
-							children: /* @__PURE__ */ $(P, {
+							children: /* @__PURE__ */ $(N, {
 								severity: "info",
-								children: [/* @__PURE__ */ Q(F, { children: e("Uploading of sequences has been disabled.") }), /* @__PURE__ */ Q(I, { children: e("Uploading of sequences is not supported for the selected case type.") })]
+								children: [/* @__PURE__ */ Q(P, { children: e("Uploading of sequences has been disabled.") }), /* @__PURE__ */ Q(I, { children: e("Uploading of sequences is not supported for the selected case type.") })]
 							})
 						}),
 						!H && /* @__PURE__ */ Q(I, {
 							sx: { marginY: 1 },
-							children: /* @__PURE__ */ $(P, {
+							children: /* @__PURE__ */ $(N, {
 								severity: "info",
-								children: [/* @__PURE__ */ Q(F, { children: e("Uploading of read files has been disabled.") }), /* @__PURE__ */ Q(I, { children: e("Uploading of read files is not supported for the selected case type.") })]
+								children: [/* @__PURE__ */ Q(P, { children: e("Uploading of read files has been disabled.") }), /* @__PURE__ */ Q(I, { children: e("Uploading of read files is not supported for the selected case type.") })]
 							})
 						})
 					]
@@ -1254,26 +1254,26 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 							top: 0
 						},
 						children: U && /* @__PURE__ */ Q(Be, {
-							accept: ie,
+							accept: re,
 							initialDataTransfer: f,
 							numFilesAllowed: Infinity,
-							onDataTransferChange: se
+							onDataTransferChange: oe
 						})
 					})
 				}),
 				/* @__PURE__ */ Q(Ve, {
-					onGoBackButtonClick: oe,
-					onProceedButtonClick: ae,
+					onGoBackButtonClick: ae,
+					onProceedButtonClick: ie,
 					proceedLabel: U ? void 0 : e`Proceed`
 				})
 			]
 		})
 	});
 }, tt = () => {
-	let { t: e } = X(), n = le(), r = W(p), i = l(r, (e) => e.goToNextStep), o = l(r, (e) => e.goToPreviousStep), s = l(r, (e) => e.completeCaseType), c = l(r, (e) => e.sampleIdColId), u = l(r, (e) => e.sequenceFilesDataTransfer), f = l(r, d((e) => {
+	let { t: e } = X(), n = se(), r = W(p), i = l(r, (e) => e.goToNextStep), o = l(r, (e) => e.goToPreviousStep), s = l(r, (e) => e.completeCaseType), c = l(r, (e) => e.sampleIdColId), u = l(r, (e) => e.sequenceFilesDataTransfer), f = l(r, d((e) => {
 		let t = e.selectedIdsForUpload;
 		return e.validatedCases.filter((e) => t.includes(e.id));
-	})), m = l(r, (e) => e.setSequenceMapping), h = q(() => t.getCompleteCaseTypeColStats(s), [s]), g = ue(), _ = ue(), v = J(r.getState().sequenceMapping), y = G(async () => {
+	})), m = l(r, (e) => e.setSequenceMapping), h = q(() => t.getCompleteCaseTypeColStats(s), [s]), g = ce(), _ = ce(), v = J(r.getState().sequenceMapping), y = G(async () => {
 		m(v.current), await i();
 	}, [m, i]), b = G(() => {
 		o();
@@ -1294,19 +1294,19 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	K(() => {
 		x();
 	}, [x]);
-	let S = q(() => fe({ idSelectorCallback: (e) => e.id }), []), C = G((e, t) => e.some((e) => {
+	let S = q(() => ue({ idSelectorCallback: (e) => e.id }), []), C = G((e, t) => e.some((e) => {
 		let n = a.getRowValue(e.validated_content, t, s);
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 		let { dropDownOptions: t, dropDownValue: n, label: r, onChange: i } = e;
-		return /* @__PURE__ */ Q(ne, {
+		return /* @__PURE__ */ Q(F, {
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 			fullWidth: !0,
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 				i(t), m(v.current), x();
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 			options: t,
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+			renderInput: (e) => /* @__PURE__ */ Q(ie, {
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 				size: "small"
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 		},
 		children: [/* @__PURE__ */ Q(I, {
 			sx: { paddingBottom: 1 },
-			children: /* @__PURE__ */ $(P, {
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 			})
-		}), /* @__PURE__ */ $(de, {
+		}), /* @__PURE__ */ $(le, {
 			store: S,
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+	let { t: e } = X(), t = se(), n = W(p), r = l(n, (e) => e.completeCaseType), i = l(n, (e) => e.activeStep), a = l(n, (e) => e.stepOrder), o = q(() => ({
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 			position: "relative",
 			width: "100%"
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-		children: [/* @__PURE__ */ Q(R, { children: /* @__PURE__ */ Q(ve, {
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