@gen-epix/ui-client-casedb 4.0.2 → 4.2.0

package/dist/_chunks/Upload.js

@@ -10,55 +10,55 @@ import { t as u } from "./CompletCaseTypeLoader.js";
 import { t as d } from "./shallow.js";
 import { UPLOAD_STEP as f } from "../models/upload.js";
 import { UploadStoreContext as p } from "../stores/uploadStore/index.js";
-import { c as m, o as h } from "./index.esm.js";
-import { t as g } from "./yup.js";
-import { useCaseTypeOptionsQuery as _, useCaseTypesQuery as v } from "../dataHooks/useCaseTypesQuery/index.js";
-import { useDataCollectionOptionsQuery as y } from "../dataHooks/useDataCollectionsQuery/index.js";
-import { useColMapQuery as b, useColsQuery as x } from "../dataHooks/useColsQuery/index.js";
-import { CaseContentFormDialog as S } from "../components/ui/CaseContentFormDialog/index.js";
-import { FileSelector as C } from "../components/ui/FileSelector/index.js";
-import { useSequencingProtocolOptionsQuery as w } from "../dataHooks/useSequencingProtocolsQuery/index.js";
-import { useAssemblyProtocolOptionsQuery as T } from "../dataHooks/useAssemblyProtocolsQuery/index.js";
-import { mixed as E, object as D, string as O } from "yup";
-import { CaseDbCaseApi as k, CaseDbDataIssueType as A, CaseDbEtlStatus as j, CaseDbUploadAction as M } from "@gen-epix/api-casedb";
+import { t as m } from "./yup.js";
+import { useCaseTypeOptionsQuery as h, useCaseTypesQuery as g } from "../dataHooks/useCaseTypesQuery/index.js";
+import { useDataCollectionOptionsQuery as _ } from "../dataHooks/useDataCollectionsQuery/index.js";
+import { useColMapQuery as v, useColsQuery as y } from "../dataHooks/useColsQuery/index.js";
+import { CaseContentFormDialog as b } from "../components/ui/CaseContentFormDialog/index.js";
+import { useSequencingProtocolOptionsQuery as x } from "../dataHooks/useSequencingProtocolsQuery/index.js";
+import { useAssemblyProtocolOptionsQuery as S } from "../dataHooks/useAssemblyProtocolsQuery/index.js";
+import { mixed as C, object as w, string as T } from "yup";
+import { CaseDbCaseApi as E, CaseDbDataIssueType as D, CaseDbEtlStatus as O, CaseDbUploadAction as k } from "@gen-epix/api-casedb";
 import { QueryClientService as ee } from "@gen-epix/ui-client-common/classes/services/QueryClientService";
-import { ObjectUtil as N } from "@gen-epix/ui-core/utils/ObjectUtil";
-import { FORM_FIELD_DEFINITION_TYPE as P } from "@gen-epix/ui-core-form/models/form";
-import { ConfigService as te } from "@gen-epix/ui-client-common/classes/services/ConfigService";
-import { Alert as F, AlertTitle as I, Autocomplete as ne, Box as L, Button as R, Container as re, ListItemIcon as z, ListItemText as B, MenuItem as ie, Table as V, TableBody as H, TableCell as U, TableHead as ae, TableRow as oe, TextField as se, Tooltip as ce, Typography as le, useTheme as ue } from "@mui/material";
-import { use as W, useCallback as G, useEffect as K, useId as de, useMemo as q, useRef as J, useState as Y } from "react";
+import { ObjectUtil as A } from "@gen-epix/ui-core/utils/ObjectUtil";
+import { FORM_FIELD_DEFINITION_TYPE as j } from "@gen-epix/ui-core-form/models/form";
+import { ConfigService as M } from "@gen-epix/ui-client-common/classes/services/ConfigService";
+import { Alert as N, AlertTitle as P, Autocomplete as F, Box as I, Button as L, Container as te, ListItemIcon as ne, ListItemText as R, MenuItem as z, Table as B, TableBody as V, TableCell as H, TableHead as U, TableRow as re, TextField as ie, Tooltip as ae, Typography as oe, useTheme as se } from "@mui/material";
+import { use as W, useCallback as G, useEffect as K, useId as ce, useMemo as q, useRef as J, useState as Y } from "react";
 import { useTranslation as X } from "react-i18next";
-import { TableStoreContextProvider as fe, createTableStore as pe, useTableStoreContext as me } from "@gen-epix/ui-client-common/stores/tableStore";
+import { TableStoreContextProvider as le, createTableStore as ue, useTableStoreContext as de } from "@gen-epix/ui-client-common/stores/tableStore";
 import { Fragment as Z, jsx as Q, jsxs as $ } from "react/jsx-runtime";
-import { ResponseHandler as he } from "@gen-epix/ui-client-common/components/ui/ResponseHandler";
-import { useItemQuery as ge } from "@gen-epix/ui-client-common/hooks/useItemQuery";
-import { useArray as _e } from "@gen-epix/ui-core/hooks/useArray";
-import ve from "@mui/material/Box";
-import { Stepper as ye } from "@gen-epix/ui-core-components/components/Stepper";
-import { GenericForm as be } from "@gen-epix/ui-core-form/components/helpers/GenericForm";
-import { useQueryMemo as xe } from "@gen-epix/ui-client-common/hooks/useQueryMemo";
-import { useIdentifierIssuerOwnOrganizationOptionsQuery as Se } from "@gen-epix/ui-client-common/dataHooks/useIdentifierIssuerOwnOrganizationQuery";
-import { Select as Ce } from "@gen-epix/ui-core-form/components/fields/Select";
-import { BackdropSpinner as we } from "@gen-epix/ui-core-components/components/BackdropSpinner";
-import { Confirmation as Te } from "@gen-epix/ui-core-components/components/Confirmation";
-import Ee from "@mui/icons-material/Edit";
-import De from "@mui/icons-material/ErrorOutlined";
-import Oe from "@mui/icons-material/Add";
-import { Table as ke, TableMenu as Ae } from "@gen-epix/ui-client-common/components/ui/Table";
-import { TABLE_COLUMN_FROZEN as je } from "@gen-epix/ui-client-common/models/table";
-import { TableUtil as Me } from "@gen-epix/ui-client-common/utils/TableUtil";
-import { useInitializeTableStore as Ne } from "@gen-epix/ui-client-common/hooks/useInitializeTableStore";
-import { withDialog as Pe } from "@gen-epix/ui-core-components/hoc/withDialog";
-import { TestIdUtil as Fe } from "@gen-epix/ui-core/utils/TestIdUtil";
-import { FormUtil as Ie } from "@gen-epix/ui-core-form/utils/FormUtil";
-import { GenericErrorMessage as Le } from "@gen-epix/ui-client-common/components/ui/GenericErrorMessage";
-import { InactivityService as Re } from "@gen-epix/ui-client-common/classes/services/InactivityService";
-import { LinearProgressWithLabel as ze } from "@gen-epix/ui-core-components/components/LinearProgressWithLabel";
-import { RouterService as Be } from "@gen-epix/ui-client-common/classes/services/RouterService";
+import { ResponseHandler as fe } from "@gen-epix/ui-client-common/components/ui/ResponseHandler";
+import { useItemQuery as pe } from "@gen-epix/ui-client-common/hooks/useItemQuery";
+import { useArray as me } from "@gen-epix/ui-core/hooks/useArray";
+import he from "@mui/material/Box";
+import { Stepper as ge } from "@gen-epix/ui-core-components/components/Stepper";
+import { useForm as _e, useWatch as ve } from "react-hook-form";
+import { GenericForm as ye } from "@gen-epix/ui-core-form/components/helpers/GenericForm";
+import { useQueryMemo as be } from "@gen-epix/ui-client-common/hooks/useQueryMemo";
+import { useIdentifierIssuerOwnOrganizationOptionsQuery as xe } from "@gen-epix/ui-client-common/dataHooks/useIdentifierIssuerOwnOrganizationQuery";
+import { Select as Se } from "@gen-epix/ui-core-form/components/fields/Select";
+import { BackdropSpinner as Ce } from "@gen-epix/ui-core-components/components/BackdropSpinner";
+import { Confirmation as we } from "@gen-epix/ui-core-components/components/Confirmation";
+import Te from "@mui/icons-material/Edit";
+import Ee from "@mui/icons-material/ErrorOutlined";
+import De from "@mui/icons-material/Add";
+import { Table as Oe, TableMenu as ke } from "@gen-epix/ui-client-common/components/ui/Table";
+import { TABLE_COLUMN_FROZEN as Ae } from "@gen-epix/ui-client-common/models/table";
+import { TableUtil as je } from "@gen-epix/ui-client-common/utils/TableUtil";
+import { useInitializeTableStore as Me } from "@gen-epix/ui-client-common/hooks/useInitializeTableStore";
+import { withDialog as Ne } from "@gen-epix/ui-core-components/hoc/withDialog";
+import { TestIdUtil as Pe } from "@gen-epix/ui-core/utils/TestIdUtil";
+import { FormUtil as Fe } from "@gen-epix/ui-core-form/utils/FormUtil";
+import { GenericErrorMessage as Ie } from "@gen-epix/ui-client-common/components/ui/GenericErrorMessage";
+import { InactivityService as Le } from "@gen-epix/ui-client-common/classes/services/InactivityService";
+import { LinearProgressWithLabel as Re } from "@gen-epix/ui-core-components/components/LinearProgressWithLabel";
+import { RouterService as ze } from "@gen-epix/ui-client-common/classes/services/RouterService";
+import { MultiFileUploader as Be } from "@gen-epix/ui-core-components/components/MultiFileUploader";
 //#region src/components/ui/Upload/UploadNavigation.tsx
 var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proceedDisabled: r, proceedLabel: i }) => {
 	let { t: a } = X(), o = W(p), s = l(o, (e) => e.stepOrder), c = l(o, (e) => e.activeStep), u = l(o, (e) => e.goBackFromFirstStepCallback), d = l(o, (e) => e.goBackFromFirstStepLabel), f = c === s[0], m = f ? u ?? t : t;
-	return /* @__PURE__ */ $(L, {
+	return /* @__PURE__ */ $(I, {
 		sx: {
 			borderTop: (e) => `1px solid ${e.palette.divider}`,
 			display: "flex",
@@ -67,11 +67,11 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			marginTop: 1,
 			paddingTop: 1
 		},
-		children: [m && /* @__PURE__ */ Q(R, {
+		children: [m && /* @__PURE__ */ Q(L, {
 			onClick: m,
 			variant: "outlined",
 			children: (f ? d ?? e : e) ?? a`Go back`
-		}), n && /* @__PURE__ */ Q(R, {
+		}), n && /* @__PURE__ */ Q(L, {
 			color: "secondary",
 			disabled: r,
 			onClick: n,
@@ -80,66 +80,70 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		})]
 	});
 }, He = () => {
-	let { t: e } = X(), n = v(), r = _(), a = y(), o = x(), s = de(), c = W(p), u = l(c, (e) => e.caseTypeId), d = l(c, (e) => e.fileList), f = l(c, (e) => e.fileName), m = l(c, (e) => e.fileParsingError), b = l(c, (e) => e.goToNextStep), S = l(c, (e) => e.createdInDataCollectionOptions), C = l(c, (e) => e.rawData), w = l(c, (e) => e.setCols), T = l(c, (e) => e.setCaseTypeId), A = l(c, (e) => e.setCompleteCaseType), j = l(c, (e) => e.setCreatedInDataCollectionId), M = l(c, (e) => e.setFileList), ee = l(c, (e) => e.setSheet), N = l(c, (e) => e.setDataCollectionOptions), te = l(c, (e) => e.sheet), ne = l(c, (e) => e.sheetOptions), L = q(() => D().shape({
-		caseTypeId: O().uuid4().required(),
-		createdInDataCollectionId: O().uuid4().required(),
-		fileList: E().required(e`File is required`),
-		sheet: O().required(e`Sheet is required`)
-	}), [e]), R = h({
+	let { t: e } = X(), n = g(), r = h(), a = _(), o = y(), s = ce(), c = W(p), u = l(c, (e) => e.caseTypeId), d = l(c, (e) => e.fileList), f = l(c, (e) => e.fileName), v = l(c, (e) => e.fileParsingError), b = l(c, (e) => e.goToNextStep), x = l(c, (e) => e.createdInDataCollectionOptions), S = l(c, (e) => e.rawData), D = l(c, (e) => e.setCols), O = l(c, (e) => e.setCaseTypeId), k = l(c, (e) => e.setCompleteCaseType), ee = l(c, (e) => e.setCreatedInDataCollectionId), A = l(c, (e) => e.setFileList), M = l(c, (e) => e.setSheet), F = l(c, (e) => e.setDataCollectionOptions), I = l(c, (e) => e.sheet), L = l(c, (e) => e.sheetOptions), ne = q(() => w().shape({
+		caseTypeId: T().uuid4().required(),
+		createdInDataCollectionId: T().uuid4().required(),
+		fileList: C().required(e`File is required`),
+		sheet: T().when("fileList", {
+			is: t.isXlsxFile(f),
+			otherwise: (e) => e.notRequired(),
+			then: (t) => t.required(e`Sheet is required`)
+		})
+	}), [f, e]), R = _e({
 		defaultValues: {
 			caseTypeId: null,
 			createdInDataCollectionId: null,
 			fileList: null,
 			sheet: null
 		},
-		resolver: g(L),
+		resolver: m(ne),
 		values: {
 			caseTypeId: c.getState().caseTypeId ?? null,
 			createdInDataCollectionId: c.getState().createdInDataCollectionId ?? null,
 			fileList: c.getState().fileList ?? null,
 			sheet: c.getState().sheet ?? null
 		}
-	}), { handleSubmit: z, setError: B, setValue: ie } = R;
+	}), { handleSubmit: z, setError: B, setValue: V } = R;
 	K(() => {
-		Array.isArray(o?.data) && w(o.data);
-	}, [o.data, w]), K(() => {
-		a?.options?.length && N(a.options);
-	}, [a?.options, N]);
-	let { data: V, error: H, isLoading: U } = ge({
+		Array.isArray(o?.data) && D(o.data);
+	}, [o.data, D]), K(() => {
+		a?.options?.length && F(a.options);
+	}, [a?.options, F]);
+	let { data: H, error: U, isLoading: re } = pe({
 		baseQueryKey: i.COMPLETE_CASE_TYPES,
 		itemId: u,
 		useQueryOptions: {
 			enabled: !!u,
-			queryFn: async ({ signal: e }) => (await k.getInstance().completeCaseTypesGetOne(u, { signal: e })).data
+			queryFn: async ({ signal: e }) => (await E.getInstance().completeCaseTypesGetOne(u, { signal: e })).data
 		}
 	});
 	K(() => {
-		V && A(V);
-	}, [V, A]);
-	let ae = G(async (e) => {
+		H && k(H);
+	}, [H, k]);
+	let ie = G(async (e) => {
+		await A(e);
+	}, [A]), ae = G(async (e) => {
 		await M(e);
-	}, [M]), oe = G(async (e) => {
-		await ee(e);
-	}, [ee]), se = G((e) => {
-		T(e);
-	}, [T]), ce = G((e) => {
-		j(e);
-	}, [j]), ue = q(() => {
+	}, [M]), se = G((e) => {
+		O(e);
+	}, [O]), J = G((e) => {
+		ee(e);
+	}, [ee]), Y = q(() => {
 		let n = [{
 			accept: ".csv,.tsv,.txt,.xlsx",
-			definition: P.FILE,
+			definition: j.FILE,
 			label: e`File`,
 			name: "fileList",
-			onChange: ae
+			onChange: ie
 		}];
 		return t.isXlsxFile(f) && n.push({
-			definition: P.SELECT,
+			definition: j.SELECT,
 			label: e`Sheet`,
 			name: "sheet",
-			onChange: oe,
-			options: ne
+			onChange: ae,
+			options: L
 		}), n.push({
-			definition: P.AUTOCOMPLETE,
+			definition: j.AUTOCOMPLETE,
 			disabled: !d,
 			label: e`Case type`,
 			loading: r.isLoading,
@@ -147,50 +151,50 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			onChange: se,
 			options: r.options
 		}, {
-			definition: P.SELECT,
+			definition: j.SELECT,
 			disabled: !d || !u,
 			label: e`Create in data collection`,
-			loading: a.isLoading || U,
+			loading: a.isLoading || re,
 			name: "createdInDataCollectionId",
-			onChange: ce,
-			options: S
+			onChange: J,
+			options: x
 		}), n;
 	}, [
 		e,
-		ae,
+		ie,
 		f,
 		r.options,
 		r.isLoading,
 		d,
 		se,
-		S,
+		x,
 		a.isLoading,
-		U,
+		re,
 		u,
-		ce,
-		ne,
-		oe
+		J,
+		L,
+		ae
 	]);
 	K(() => {
-		m ? B("fileList", {
-			message: m,
+		v ? B("fileList", {
+			message: v,
 			type: "manual"
 		}) : B("fileList", void 0);
 	}, [
-		m,
+		v,
 		B,
-		ie
+		V
 	]);
-	let J = G(async () => {
+	let le = G(async () => {
 		await b();
-	}, [b]), Y = _e([
+	}, [b]), ue = me([
 		n,
 		r,
 		a,
 		o
-	]), fe = G(async () => {
-		await z(J)();
-	}, [z, J]), pe = q(() => !(o.isLoading === !1 && o.data?.length === 0 || r.isLoading === !1 && r.options?.length === 0 || a.isLoading === !1 && a.options?.length === 0), [
+	]), de = G(async () => {
+		await z(le)();
+	}, [z, le]), he = q(() => !(o.isLoading === !1 && o.data?.length === 0 || r.isLoading === !1 && r.options?.length === 0 || a.isLoading === !1 && a.options?.length === 0), [
 		o.data?.length,
 		o.isLoading,
 		r.isLoading,
@@ -198,69 +202,69 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		a.isLoading,
 		a.options?.length
 	]);
-	return /* @__PURE__ */ Q(he, {
-		error: H,
+	return /* @__PURE__ */ Q(fe, {
+		error: U,
 		inlineSpinner: !0,
-		loadables: Y,
-		children: /* @__PURE__ */ $(re, {
+		loadables: ue,
+		children: /* @__PURE__ */ $(te, {
 			maxWidth: "lg",
-			children: [!pe && /* @__PURE__ */ Q(F, {
+			children: [!he && /* @__PURE__ */ Q(N, {
 				severity: "warning",
 				sx: { mb: 2 },
 				children: e("Upload is disabled because you have insufficient data access to proceed. Contact your organization administrator for assistance.")
-			}), pe && /* @__PURE__ */ $(Z, { children: [
-				C && C.length > 0 && /* @__PURE__ */ $(F, {
+			}), he && /* @__PURE__ */ $(Z, { children: [
+				S && S.length > 0 && /* @__PURE__ */ $(N, {
 					severity: "info",
 					sx: { mb: 2 },
 					children: [
-						/* @__PURE__ */ Q(I, { children: e("{{fileName}} loaded successfully", { fileName: f }) }),
-						te && /* @__PURE__ */ Q(le, { children: e("Sheet name: {{sheet}}", { sheet: te || "" }) }),
-						/* @__PURE__ */ Q(le, { children: e("Number of columns: {{columnCount}}", { columnCount: C[0].length }) }),
-						/* @__PURE__ */ Q(le, { children: e("Number of data rows: {{rowCount}}", { rowCount: C.length - 1 }) })
+						/* @__PURE__ */ Q(P, { children: e("{{fileName}} loaded successfully", { fileName: f }) }),
+						I && /* @__PURE__ */ Q(oe, { children: e("Sheet name: {{sheet}}", { sheet: I || "" }) }),
+						/* @__PURE__ */ Q(oe, { children: e("Number of columns: {{columnCount}}", { columnCount: S[0].length }) }),
+						/* @__PURE__ */ Q(oe, { children: e("Number of data rows: {{rowCount}}", { rowCount: S.length - 1 }) })
 					]
 				}),
-				/* @__PURE__ */ Q(be, {
-					formFieldDefinitions: ue,
+				/* @__PURE__ */ Q(ye, {
+					formFieldDefinitions: Y,
 					formId: s,
 					formMethods: R,
-					onSubmit: z(J),
-					schema: L
+					onSubmit: z(le),
+					schema: ne
 				}),
-				/* @__PURE__ */ Q(Ve, { onProceedButtonClick: fe })
+				/* @__PURE__ */ Q(Ve, { onProceedButtonClick: de })
 			] })]
 		})
 	});
 }, Ue = /* @__PURE__ */ e(r(), 1), We = /* @__PURE__ */ e(o(), 1), Ge = () => {
-	let { t: e } = X(), n = b(), r = Se(), i = W(p), a = l(i, (e) => e.completeCaseType), o = l(i, (e) => e.rawData), s = l(i, (e) => e.fileName), c = l(i, (e) => e.goToNextStep), u = l(i, (e) => e.goToPreviousStep), d = l(i, (e) => e.setMappedColumns), f = _e([n, r]), _ = de(), v = q(() => t.getColumnMappingSchema(o, a), [a, o]), y = q(() => t.getDefaultColumnMappingFormValues(o[0], i.getState().mappedColumns, r.options), [
+	let { t: e } = X(), n = v(), r = xe(), i = W(p), a = l(i, (e) => e.completeCaseType), o = l(i, (e) => e.rawData), s = l(i, (e) => e.fileName), c = l(i, (e) => e.goToNextStep), u = l(i, (e) => e.goToPreviousStep), d = l(i, (e) => e.setMappedColumns), f = me([n, r]), h = ce(), g = q(() => t.getColumnMappingSchema(o, a), [a, o]), _ = q(() => t.getDefaultColumnMappingFormValues(o[0], i.getState().mappedColumns, r.options), [
 		o,
 		i,
 		r.options
-	]), x = h({
-		defaultValues: { ...y },
-		resolver: g(v),
-		values: { ...y }
-	}), { clearErrors: S, control: C, handleSubmit: w } = x, T = m({ control: C }), E = q(() => t.getColumnMappingFormFieldDefinitions(a, o[0], s).map((e) => ({
+	]), y = _e({
+		defaultValues: { ..._ },
+		resolver: m(g),
+		values: { ..._ }
+	}), { clearErrors: b, control: x, handleSubmit: S } = y, C = ve({ control: x }), w = q(() => t.getColumnMappingFormFieldDefinitions(a, o[0], s).map((e) => ({
 		...e,
-		onChange: () => S()
+		onChange: () => b()
 	})), [
 		a,
 		o,
 		s,
-		S
+		b
 	]);
 	K(() => {
 		(async () => {
-			await d(t.getMappedColumnsFromFormData(T, o, n.map, a));
+			await d(t.getMappedColumnsFromFormData(C, o, n.map, a));
 		})();
 	}, [
 		d,
-		T,
+		C,
 		o,
 		n.map,
 		a
 	]);
-	let D = q(() => {
-		let e = o[0].map((e, t) => t), r = t.getMappedColumnsFromFormData(T, o, n.map, a).map((e) => e.originalIndex);
+	let T = q(() => {
+		let e = o[0].map((e, t) => t), r = t.getMappedColumnsFromFormData(C, o, n.map, a).map((e) => e.originalIndex);
 		return (0, We.default)(e, r).map((e) => ({
 			originalIndex: e,
 			originalLabel: o[0][e]
@@ -268,9 +272,9 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	}, [
 		n.map,
 		o,
-		T,
+		C,
 		a
-	]), O = G(async (e) => {
+	]), E = G(async (e) => {
 		await d(t.getMappedColumnsFromFormData(e, o, n.map, a)), await c();
 	}, [
 		o,
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-		return k.includes(c) && (s = /* @__PURE__ */ $(Z, { children: [/* @__PURE__ */ Q(L, { children: n }), /* @__PURE__ */ Q(L, {
+	]), D = q(() => t.getSampleIdColIds(a), [a]), O = G((t, n) => {
+		let i = parseInt(t.name, 10), a = (0, Ue.default)(o.slice(1).map((e) => e[i] ?? "")).filter((e) => !!e).slice(0, 5).join(", ").trim() || e("<no data>"), s = n, c = C[t.name];
+		return D.includes(c) && (s = /* @__PURE__ */ $(Z, { children: [/* @__PURE__ */ Q(I, { children: n }), /* @__PURE__ */ Q(I, {
 			sx: { marginTop: 1 },
-			children: /* @__PURE__ */ Q(Ce, {
+			children: /* @__PURE__ */ Q(Se, {
 				label: e("{{columnLabel}}: Identifier issuer", { columnLabel: t.label }),
 				loading: r.isLoading,
 				name: c,
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-		})] })), /* @__PURE__ */ $(oe, { children: [
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-			/* @__PURE__ */ Q(U, { children: s }),
-			/* @__PURE__ */ Q(U, { children: a })
+		})] })), /* @__PURE__ */ $(re, { children: [
+			/* @__PURE__ */ Q(H, { children: t.label }),
+			/* @__PURE__ */ Q(H, { children: s }),
+			/* @__PURE__ */ Q(H, { children: a })
 		] }, t.name);
 	}, [
-		T,
+		C,
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-		k,
+		D,
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 		size: "small",
-		children: [/* @__PURE__ */ Q(ae, {
+		children: [/* @__PURE__ */ Q(U, {
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 				backgroundColor: (e) => e.palette.background.paper,
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 			},
-			children: /* @__PURE__ */ $(oe, { children: [
-				/* @__PURE__ */ Q(U, {
+			children: /* @__PURE__ */ $(re, { children: [
+				/* @__PURE__ */ Q(H, {
 					sx: { width: "33%" },
 					children: e`Source`
 				}),
-				/* @__PURE__ */ Q(U, {
+				/* @__PURE__ */ Q(H, {
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-					children: te.getInstance().config.applicationName
+					children: M.getInstance().config.applicationName
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-				/* @__PURE__ */ Q(U, {
+				/* @__PURE__ */ Q(H, {
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-	}), [e]), M = G(async () => {
-		await w(O)();
-	}, [w, O]), ee = G(() => {
+		}), /* @__PURE__ */ Q(V, { children: t })]
+	}), [e]), ee = G(async () => {
+		await S(E)();
+	}, [S, E]), A = G(() => {
 		u();
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-	return /* @__PURE__ */ Q(he, {
+	return /* @__PURE__ */ Q(fe, {
 		loadables: f,
-		children: /* @__PURE__ */ $(L, {
+		children: /* @__PURE__ */ $(I, {
 			sx: {
 				display: "grid",
 				gridTemplateRows: "max-content auto max-content",
 				height: "100%"
 			},
 			children: [
-				/* @__PURE__ */ Q(re, {
+				/* @__PURE__ */ Q(te, {
 					maxWidth: "lg",
 					sx: { marginBottom: 2 },
-					children: /* @__PURE__ */ $(F, {
-						severity: D.length === 0 ? "info" : "warning",
+					children: /* @__PURE__ */ $(N, {
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 						children: [
-							/* @__PURE__ */ Q(I, { children: D.length === 0 ? e("All columns in {{fileName}} have been mapped to known columns in {{applicationName}}", {
-								applicationName: te.getInstance().config.applicationName,
+							/* @__PURE__ */ Q(P, { children: T.length === 0 ? e("All columns in {{fileName}} have been mapped to known columns in {{applicationName}}", {
+								applicationName: M.getInstance().config.applicationName,
 								fileName: s
 							}) : e("{{numUnmappedColumns}} column(s) in {{fileName}} are not mapped", {
 								fileName: s,
-								numUnmappedColumns: D.length
+								numUnmappedColumns: T.length
 							}) }),
-							D.map((t) => /* @__PURE__ */ Q(L, { children: e("The column \"{{columnName}}\" (column {{columnIndex}}) has not been mapped.", {
+							T.map((t) => /* @__PURE__ */ Q(I, { children: e("The column \"{{columnName}}\" (column {{columnIndex}}) has not been mapped.", {
 								columnIndex: t.originalIndex + 1,
 								columnName: t.originalLabel
 							}) }, t.originalIndex)),
-							D.length === 0 && e("You can proceed to the next step.")
+							T.length === 0 && e("You can proceed to the next step.")
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 					})
 				}),
-				/* @__PURE__ */ Q(L, {
+				/* @__PURE__ */ Q(I, {
 					sx: {
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 						position: "relative"
 					},
-					children: /* @__PURE__ */ Q(L, {
+					children: /* @__PURE__ */ Q(I, {
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 							left: 0,
@@ -372,20 +376,20 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
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 							top: 0
 						},
-						children: /* @__PURE__ */ Q(re, { children: /* @__PURE__ */ Q(be, {
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-							formId: _,
-							formMethods: x,
-							onSubmit: w(O),
-							renderField: A,
-							schema: v,
-							wrapForm: j
+						children: /* @__PURE__ */ Q(te, { children: /* @__PURE__ */ Q(ye, {
+							formFieldDefinitions: w,
+							formId: h,
+							formMethods: y,
+							onSubmit: S(E),
+							renderField: O,
+							schema: g,
+							wrapForm: k
 						}) })
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 				}),
-				/* @__PURE__ */ Q(L, { children: /* @__PURE__ */ Q(Ve, {
-					onGoBackButtonClick: ee,
-					onProceedButtonClick: M
+				/* @__PURE__ */ Q(I, { children: /* @__PURE__ */ Q(Ve, {
+					onGoBackButtonClick: A,
+					onProceedButtonClick: ee
 				}) })
 			]
 		})
@@ -399,8 +403,8 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
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-}, qe = Pe(({ onActionsChange: e, onClose: t, onSubmit: n, onTitleChange: r, openProps: i }) => {
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+}, qe = Ne(({ onActionsChange: e, onClose: t, onSubmit: n, onTitleChange: r, openProps: i }) => {
+	let { t: a } = X(), o = ce(), s = q(() => i.completeCaseType.cols[i.colId], [i.completeCaseType.cols, i.colId]);
 	K(() => {
 		r(a("Edit values for {{colLabel}} (for selected rows)", { colLabel: s.label }));
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@@ -411,11 +415,11 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	let l = q(() => c.createYupSchema({
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 		includedColIds: [i.colId]
-	}), [i.completeCaseType, i.colId]), u = h({ resolver: g(l) }), { handleSubmit: d } = u, { fieldDefinitions: f } = q(() => c.createFormDefinitions({
+	}), [i.completeCaseType, i.colId]), u = _e({ resolver: m(l) }), { handleSubmit: d } = u, { fieldDefinitions: f } = q(() => c.createFormDefinitions({
 		completeCaseType: i.completeCaseType,
 		includedColIds: [i.colId]
 	}), [i.completeCaseType, i.colId]), p = G((e) => {
-		n(Ie.createStringValuesFromFormValues(f, e)), t();
+		n(Fe.createStringValuesFromFormValues(f, e)), t();
 	}, [
 		f,
 		t,
@@ -423,7 +427,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	]);
 	return K(() => {
 		e([{
-			...Fe.createAttributes("UploadEditColumnValuesDialog-submitButton"),
+			...Pe.createAttributes("UploadEditColumnValuesDialog-submitButton"),
 			color: "primary",
 			form: o,
 			label: a`Save and revalidate`,
@@ -434,13 +438,13 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		o,
 		e,
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-	]), /* @__PURE__ */ $(L, { children: [i.shouldShowRightsWarning && /* @__PURE__ */ Q(L, {
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 		sx: { marginBottom: 2 },
-		children: /* @__PURE__ */ $(F, {
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 }), Je = ({ caseRightsColMap: e, caseUploadResults: t, completeCaseType: n, getOriginalCellValue: r, onCaseContentEditSubmit: i, onColContentEditSubmit: o, tableStore: s }) => {
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-		A.DERIVED,
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-	], []), p = q(() => [A.UNAUTHORIZED, A.INVALID], []), m = q(() => [A.MISSING, A.CONFLICT], []), h = G((r) => {
+	let c = se(), { t: l } = X(), u = J(null), d = J(null), f = q(() => [
+		D.UNAUTHORIZED,
+		D.INVALID,
+		D.CONFLICT,
+		D.MISSING,
+		D.DERIVED,
+		D.TRANSFORMED
+	], []), p = q(() => [D.UNAUTHORIZED, D.INVALID], []), m = q(() => [D.MISSING, D.CONFLICT], []), h = G((r) => {
 		d.current?.open({
 			colId: r.column.id,
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 		let t = v(e);
-		return /* @__PURE__ */ Q(Z, { children: t.map(({ key: e, message: t }, n) => /* @__PURE__ */ Q(L, {
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 		arrow: !0,
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 		});
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 		arrow: !0,
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-	}), [l]), E = G(({ row: e }) => e.id ? null : /* @__PURE__ */ Q(Oe, {
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+	}), [l]), E = G(({ row: e }) => e.id ? null : /* @__PURE__ */ Q(De, {
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 		"aria-label": l`This case does not have an ID and will be created`,
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 			marginTop: "5px",
 			position: "absolute"
 		}
-	}), [l]), D = G(({ id: e, row: t }) => {
-		let r = a.getRowValue(t.validated_content, n.cols[e], n).long, i = x(e, t.data_issues, r);
+	}), [l]), O = G(({ id: e, row: t }) => {
+		let r = a.getRowValue(t.validated_content, n.cols[e], n).long, i = S(e, t.data_issues, r);
 		if (i.length === 0) return /* @__PURE__ */ Q(Z, { children: r });
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-		return /* @__PURE__ */ $(L, {
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@@ -554,10 +558,10 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 					position: "relative",
 					width: c.spacing(2)
 				},
-				children: /* @__PURE__ */ Q(ce, {
+				children: /* @__PURE__ */ Q(ae, {
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 					title: y(i),
-					children: /* @__PURE__ */ Q(De, {
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@@ -566,7 +570,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 						}
 					})
 				})
-			}), /* @__PURE__ */ Q(L, {
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 					textOverflow: "ellipsis",
@@ -578,16 +582,16 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	}, [
 		n,
 		p,
-		x,
+		S,
 		y,
 		c,
 		m
-	]), O = q(() => {
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 		let i = [];
 		if (!t?.length) return i;
-		i.push(Me.createReadableIndexColumn()), i.push(Me.createSelectableColumn()), i.push({
+		i.push(je.createReadableIndexColumn()), i.push(je.createSelectableColumn()), i.push({
 			disableEllipsis: !0,
-			frozen: je.LEFT,
+			frozen: Ae.LEFT,
 			headerName: "",
 			hideInFilter: !0,
 			id: "gen-epix-ui-issue",
@@ -600,7 +604,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			widthPx: 38
 		}), i.push({
 			disableEllipsis: !0,
-			frozen: je.LEFT,
+			frozen: Ae.LEFT,
 			headerName: "",
 			hideInFilter: !0,
 			id: "gen-epix-ui-id",
@@ -617,7 +621,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
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-			let c = n.cols[s], u = t.flatMap((e) => e.data_issues.filter((e) => e.col_id === c.id)), d = u.length === 0 || u.some((e) => e.data_issue_type !== A.DERIVED), f = e[c.id]?.length;
+			let c = n.cols[s], u = t.flatMap((e) => e.data_issues.filter((e) => e.col_id === c.id)), d = u.length === 0 || u.some((e) => e.data_issue_type !== D.DERIVED), f = e[c.id]?.length;
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@@ -631,7 +635,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 					return "";
 				},
 				customHeaderIcon: f ? {
-					iconElement: /* @__PURE__ */ Q(Ee, { fontSize: "inherit" }),
+					iconElement: /* @__PURE__ */ Q(Te, { fontSize: "inherit" }),
 					label: l("Edit values for {{colLabel}} (for selected rows)", { colLabel: c.label }),
 					onClick: h
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@@ -639,7 +643,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 				hideInFilter: !0,
 				id: c.id,
 				isInitiallyVisible: d,
-				renderCell: D,
+				renderCell: O,
 				type: "text",
 				valueGetter: (e) => a.getRowValue(e.row.validated_content, c, n).short,
 				widthPx: 250
@@ -652,10 +656,10 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			type: "text",
 			valueGetter: (e) => e.row.id || "",
 			widthPx: 250
-		}), i.push(Me.createActionsColumn({
+		}), i.push(je.createActionsColumn({
 			getActions: (e) => {
 				let t = [];
-				return t.push(/* @__PURE__ */ $(ie, {
+				return t.push(/* @__PURE__ */ $(z, {
 					onClick: () => {
 						u.current?.open({
 							caseContent: e.row.validated_content,
@@ -665,7 +669,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 							formId: "edit-case-form"
 						});
 					},
-					children: [/* @__PURE__ */ Q(z, { children: /* @__PURE__ */ Q(Ee, {}) }), /* @__PURE__ */ Q(B, { children: l`Edit` })]
+					children: [/* @__PURE__ */ Q(ne, { children: /* @__PURE__ */ Q(Te, {}) }), /* @__PURE__ */ Q(R, { children: l`Edit` })]
 				}, "editCase")), t;
 			},
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@@ -680,21 +684,21 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		l,
 		e,
 		h,
-		D,
+		O,
 		r
 	]);
-	return Ne({
-		columns: O,
+	return Me({
+		columns: k,
 		createFiltersFromColumns: !0,
 		rows: t,
 		store: s
 	}), /* @__PURE__ */ $(Z, { children: [
-		/* @__PURE__ */ Q(L, { children: /* @__PURE__ */ Q(Ae, { ContainerProps: { sx: {
+		/* @__PURE__ */ Q(I, { children: /* @__PURE__ */ Q(ke, { ContainerProps: { sx: {
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 			float: "right"
 		} } }) }),
-		/* @__PURE__ */ Q(ke, { font: c["gen-epix-ui-client-casedb"].lineList.font }),
-		/* @__PURE__ */ Q(S, {
+		/* @__PURE__ */ Q(Oe, { font: c["gen-epix-ui-client-casedb"].lineList.font }),
+		/* @__PURE__ */ Q(b, {
 			onSubmit: g,
 			ref: u
 		}),
@@ -704,7 +708,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		})
 	] });
 }, Ye = ({ onGoBackButtonClick: e, onProceedButtonClick: t }) => {
-	let { t: n } = X(), r = me(), i = W(p), a = l(i, (e) => e.completeCaseType), o = l(r, (e) => e.selectedIds), s = !o.length || o.length > a.props.create_max_n_cases;
+	let { t: n } = X(), r = de(), i = W(p), a = l(i, (e) => e.completeCaseType), o = l(r, (e) => e.selectedIds), s = !o.length || o.length > a.props.create_max_n_cases;
 	return /* @__PURE__ */ Q(Ve, {
 		onGoBackButtonClick: e,
 		onProceedButtonClick: t,
@@ -712,14 +716,14 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		proceedLabel: o.length ? n("Proceed with {{count}} selected cases", { count: o.length }) : n("Proceed")
 	});
 }, Xe = Ke(({ caseTypeId: e }) => {
-	let { t } = X(), n = W(p), r = l(n, (e) => e.goToNextStep), i = l(n, (e) => e.goToPreviousStep), o = l(n, (e) => e.completeCaseType), s = l(n, (e) => e.casesForVerificationFromSourceData), c = l(n, (e) => e.createdInDataCollectionId), u = l(n, (e) => e.validateCasesQueryKey), f = l(n, (e) => e.caseRightsColMap), [m, h] = Y(!1), [g, _] = Y(!1), [v, y] = Y(null), b = J([]), x = J(null), S = J(null), C = G((e, t, n) => s[t.rowIndex]?.case?.content[e.id] ?? "", [s]), w = xe({
+	let { t } = X(), n = W(p), r = l(n, (e) => e.goToNextStep), i = l(n, (e) => e.goToPreviousStep), o = l(n, (e) => e.completeCaseType), s = l(n, (e) => e.casesForVerificationFromSourceData), c = l(n, (e) => e.createdInDataCollectionId), u = l(n, (e) => e.validateCasesQueryKey), f = l(n, (e) => e.caseRightsColMap), [m, h] = Y(!1), [g, _] = Y(!1), [v, y] = Y(null), b = J([]), x = J(null), S = J(null), C = G((e, t, n) => s[t.rowIndex]?.case?.content[e.id] ?? "", [s]), w = be({
 		enabled: s.length > 0,
 		gcTime: Infinity,
-		queryFn: async ({ signal: t }) => (await k.getInstance().uploadCases(N.deepNullifyEmptyStrings({
+		queryFn: async ({ signal: t }) => (await E.getInstance().uploadCases(A.deepNullifyEmptyStrings({
 			case_batch: { cases: s },
 			case_type_id: e,
 			default_created_in_data_collection_id: c ?? void 0,
-			on_exists: M.UPDATE,
+			on_exists: k.UPDATE,
 			verify_only: !0
 		}), { signal: t })).data,
 		queryKey: u,
@@ -728,10 +732,10 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			id: s[t].id
 		})),
 		staleTime: Infinity
-	}), T = _e([w]), E = q(() => pe({ idSelectorCallback: (e) => e.id }), []), D = l(E, d((e) => e.setSelectedIds)), O = G(async (t) => {
+	}), T = me([w]), j = q(() => ue({ idSelectorCallback: (e) => e.id }), []), M = l(j, d((e) => e.setSelectedIds)), F = G(async (t) => {
 		_(!0);
 		try {
-			let n = (await k.getInstance().uploadCases(N.deepNullifyEmptyStrings({
+			let n = (await E.getInstance().uploadCases(A.deepNullifyEmptyStrings({
 				case_batch: { cases: t.map(({ content: e, row: t }, n) => {
 					let r = s.find((e) => e.id === t.id);
 					return { case: {
@@ -748,7 +752,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 				}) },
 				case_type_id: e,
 				default_created_in_data_collection_id: c ?? void 0,
-				on_exists: M.UPDATE,
+				on_exists: k.UPDATE,
 				verify_only: !0
 			}))).data, r = new Map(t.map(({ row: e }, t) => [e.id, n.cases[t]]));
 			ee.getInstance().queryClient.setQueryData(u, { cases: w.data.map((e) => {
@@ -761,10 +765,10 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			let i = [];
 			if (t.forEach(({ row: e }, t) => {
 				let r = n.cases[t];
-				r.status !== j.SKIPPED && r.status !== j.SUCCESS && r.status !== j.UPDATED && (b.current.includes(e.id) || (b.current.push(e.id), i.push(e.id)));
+				r.status !== O.SKIPPED && r.status !== O.SUCCESS && r.status !== O.UPDATED && (b.current.includes(e.id) || (b.current.push(e.id), i.push(e.id)));
 			}), i.length > 0) {
-				let e = E.getState().selectedIds, t = i.filter((t) => !e.includes(t));
-				t.length > 0 && D([...e, ...t]);
+				let e = j.getState().selectedIds, t = i.filter((t) => !e.includes(t));
+				t.length > 0 && M([...e, ...t]);
 			}
 		} catch (e) {
 			y(e);
@@ -777,12 +781,12 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		s,
 		o,
 		c,
-		D,
-		E,
+		M,
+		j,
 		u
-	]), P = G(async (e) => {
-		let t = E.getState().selectedIds;
-		await O(w.data.filter((e) => t.includes(e.id)).map((t) => ({
+	]), L = G(async (e) => {
+		let t = j.getState().selectedIds;
+		await F(w.data.filter((e) => t.includes(e.id)).map((t) => ({
 			content: {
 				...t.validated_content,
 				...e[t.id]
@@ -791,17 +795,17 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		})));
 	}, [
 		w.data,
-		O,
-		E
+		F,
+		j
 	]), te = G(async (e, t) => {
 		let n = w.data.find((t) => t.id === e);
-		await O([{
+		await F([{
 			content: t,
 			row: n
 		}]);
-	}, [w.data, O]);
+	}, [w.data, F]);
 	K(() => {
-		let e = E.subscribe((e, t) => {
+		let e = j.subscribe((e, t) => {
 			if (e.selectedIds === t.selectedIds) return;
 			b.current = e.selectedIds;
 			let n = e.selectedIds.length > o.props.create_max_n_cases;
@@ -810,12 +814,12 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		return () => {
 			e();
 		};
-	}, [o.props.create_max_n_cases, E]), K(() => {
-		let e = (w.data ?? []).filter((e) => !e.data_issues.some((e) => e.data_issue_type === A.INVALID || e.data_issue_type === A.UNAUTHORIZED)).map((e) => e.id);
-		D(e);
-	}, [w.data, D]);
+	}, [o.props.create_max_n_cases, j]), K(() => {
+		let e = (w.data ?? []).filter((e) => !e.data_issues.some((e) => e.data_issue_type === D.INVALID || e.data_issue_type === D.UNAUTHORIZED)).map((e) => e.id);
+		M(e);
+	}, [w.data, M]);
 	let ne = G(async () => {
-		let e = E.getState().selectedIds, t = w.data.filter((t) => e.includes(t.id) && !t.data_issues.some((e) => e.data_issue_type === A.INVALID));
+		let e = j.getState().selectedIds, t = w.data.filter((t) => e.includes(t.id) && !t.data_issues.some((e) => e.data_issue_type === D.INVALID));
 		n.setState((e) => ({
 			...e,
 			selectedIdsForUpload: t.map((e) => e.id),
@@ -825,7 +829,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		w.data,
 		r,
 		n,
-		E
+		j
 	]), R = G(async () => {
 		n.setState((e) => ({
 			...e,
@@ -836,12 +840,12 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		r,
 		w.data,
 		n
-	]), re = G(async () => {
-		if (w.data.some((e) => E.getState().selectedIds.includes(e.id) && (e.data_issues.some((e) => e.data_issue_type === A.INVALID) || e.status === j.FAILED))) {
+	]), z = G(async () => {
+		if (w.data.some((e) => j.getState().selectedIds.includes(e.id) && (e.data_issues.some((e) => e.data_issue_type === D.INVALID) || e.status === O.FAILED))) {
 			x.current?.open();
 			return;
 		}
-		if (w.data.some((e) => !E.getState().selectedIds.includes(e.id) && !e.data_issues.some((e) => e.data_issue_type === A.INVALID))) {
+		if (w.data.some((e) => !j.getState().selectedIds.includes(e.id) && !e.data_issues.some((e) => e.data_issue_type === D.INVALID))) {
 			S.current?.open();
 			return;
 		}
@@ -849,11 +853,11 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	}, [
 		w.data,
 		R,
-		E
-	]), z = G(() => {
+		j
+	]), B = G(() => {
 		i();
 	}, [i]);
-	return /* @__PURE__ */ $(L, {
+	return /* @__PURE__ */ $(I, {
 		sx: {
 			display: "grid",
 			gridTemplateRows: `${m ? "max-content" : ""} max-content auto max-content`,
@@ -862,20 +866,20 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			width: "100%"
 		},
 		children: [
-			/* @__PURE__ */ Q(fe, {
-				store: E,
-				children: /* @__PURE__ */ $(he, {
+			/* @__PURE__ */ Q(le, {
+				store: j,
+				children: /* @__PURE__ */ $(fe, {
 					error: v,
 					inlineSpinner: !0,
 					loadables: T,
 					loadingMessage: t("Validating cases"),
 					takingLongerTimeoutMs: 1e4,
 					children: [
-						m && /* @__PURE__ */ Q(L, {
+						m && /* @__PURE__ */ Q(I, {
 							sx: { marginY: 2 },
-							children: /* @__PURE__ */ Q(F, {
+							children: /* @__PURE__ */ Q(N, {
 								severity: "error",
-								children: /* @__PURE__ */ Q(I, { children: t("You have exceeded the maximum number of {{maxCases}} cases for this case type. Please reduce the number of selected cases before proceeding.", { maxCases: o.props.create_max_n_cases }) })
+								children: /* @__PURE__ */ Q(P, { children: t("You have exceeded the maximum number of {{maxCases}} cases for this case type. Please reduce the number of selected cases before proceeding.", { maxCases: o.props.create_max_n_cases }) })
 							})
 						}),
 						/* @__PURE__ */ Q(Je, {
@@ -884,21 +888,21 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 							completeCaseType: o,
 							getOriginalCellValue: C,
 							onCaseContentEditSubmit: te,
-							onColContentEditSubmit: P,
-							tableStore: E
+							onColContentEditSubmit: L,
+							tableStore: j
 						}),
 						/* @__PURE__ */ Q(Ye, {
-							onGoBackButtonClick: z,
-							onProceedButtonClick: re
+							onGoBackButtonClick: B,
+							onProceedButtonClick: z
 						})
 					]
 				})
 			}),
-			/* @__PURE__ */ Q(we, {
+			/* @__PURE__ */ Q(Ce, {
 				label: t("Revalidating cases"),
 				open: g
 			}),
-			/* @__PURE__ */ Q(Te, {
+			/* @__PURE__ */ Q(we, {
 				body: t`Some of the selected cases contain issues. If you proceed, these cases will be excluded. Are you sure you want to proceed without them?`,
 				cancelLabel: t`Cancel`,
 				confirmLabel: t`Proceed`,
@@ -906,7 +910,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 				ref: x,
 				title: t`Issues found with selected cases`
 			}),
-			/* @__PURE__ */ Q(Te, {
+			/* @__PURE__ */ Q(we, {
 				body: t`Not all cases are selected. Do you want to proceed without them?`,
 				cancelLabel: t`Cancel`,
 				confirmLabel: t`Proceed`,
@@ -920,9 +924,9 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	let { t: e } = X(), r = W(p), i = l(r, (e) => e.reset), a = l(r, (e) => e.goToPreviousStep), o = l(r, (e) => e.sequenceMapping), c = l(r, (e) => e.sequenceFilesDataTransfer), u = l(r, (e) => e.validatedCases), d = l(r, (e) => e.selectedIdsForUpload), f = l(r, (e) => e.casesForVerificationFromSourceData), m = l(r, (e) => e.uploadCompleteButtonCallback), h = l(r, (e) => e.uploadCompleteButtonLabel), g = l(r, (e) => e.onUploadComplete), _ = l(r, (e) => e.completeCaseType), [v, y] = Y(0), [b, x] = Y(""), [S, C] = Y(!1), [w, T] = Y(!1), [E, D] = Y(void 0), O = q(() => t.getSequenceMappingStats(o, c), [c, o]), k = q(() => u.filter((e) => d.includes(e.id)), [u, d]);
 	K(() => {
 		let e = new AbortController(), { signal: n } = e, i = () => {
-			e.abort(), Re.getInstance().resume();
+			e.abort(), Le.getInstance().resume();
 		};
-		return S ? (Re.getInstance().pause(), (async () => {
+		return S ? (Le.getInstance().pause(), (async () => {
 			let e = await t.createCasesAndUploadFiles({
 				assemblyProtocolId: r.getState().assemblyProtocolId,
 				casesForVerificationFromSourceData: f,
@@ -959,23 +963,23 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		f,
 		g
 	]);
-	let A = G(async () => {
+	let ee = G(async () => {
 		await i();
-	}, [i]), j = G(() => {
+	}, [i]), A = G(() => {
 		C(!0);
-	}, []), M = G(() => {
+	}, []), j = G(() => {
 		a();
-	}, [a]), ee = G(async () => {
+	}, [a]), M = G(async () => {
 		let e = n.createCaseTypeLink(_);
-		await Be.getInstance().router.navigate(e);
-	}, [_]), N;
-	return N = E ? /* @__PURE__ */ $(L, { children: [E instanceof s && /* @__PURE__ */ $(F, {
+		await ze.getInstance().router.navigate(e);
+	}, [_]), F;
+	return F = E ? /* @__PURE__ */ $(I, { children: [E instanceof s && /* @__PURE__ */ $(N, {
 		severity: "error",
-		children: [/* @__PURE__ */ Q(I, { children: e("Failed to create cases during upload.") }), e("An error occurred while creating cases. Please try again or contact support if the issue persists. Cases may have been partially created. No files were uploaded.")]
-	}), /* @__PURE__ */ Q(Le, { error: E })] }) : w ? /* @__PURE__ */ $(L, { children: [/* @__PURE__ */ Q(L, { children: /* @__PURE__ */ Q(F, {
+		children: [/* @__PURE__ */ Q(P, { children: e("Failed to create cases during upload.") }), e("An error occurred while creating cases. Please try again or contact support if the issue persists. Cases may have been partially created. No files were uploaded.")]
+	}), /* @__PURE__ */ Q(Ie, { error: E })] }) : w ? /* @__PURE__ */ $(I, { children: [/* @__PURE__ */ Q(I, { children: /* @__PURE__ */ Q(N, {
 		severity: "success",
-		children: /* @__PURE__ */ Q(I, { children: e("Upload completed.") })
-	}) }), /* @__PURE__ */ Q(L, {
+		children: /* @__PURE__ */ Q(P, { children: e("Upload completed.") })
+	}) }), /* @__PURE__ */ Q(I, {
 		sx: {
 			display: "flex",
 			gap: 2,
@@ -983,196 +987,196 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			marginBottom: 1,
 			marginTop: 2
 		},
-		children: m && h ? /* @__PURE__ */ Q(R, {
+		children: m && h ? /* @__PURE__ */ Q(L, {
 			onClick: m,
 			variant: "contained",
 			children: h
-		}) : /* @__PURE__ */ $(Z, { children: [/* @__PURE__ */ Q(R, {
-			onClick: A,
+		}) : /* @__PURE__ */ $(Z, { children: [/* @__PURE__ */ Q(L, {
+			onClick: ee,
 			variant: "outlined",
 			children: e("Upload more cases")
-		}), /* @__PURE__ */ Q(R, {
-			onClick: ee,
+		}), /* @__PURE__ */ Q(L, {
+			onClick: M,
 			variant: "contained",
 			children: e("View uploaded cases")
 		})] })
-	})] }) : S ? /* @__PURE__ */ $(L, { children: [
-		/* @__PURE__ */ Q(L, {
+	})] }) : S ? /* @__PURE__ */ $(I, { children: [
+		/* @__PURE__ */ Q(I, {
 			sx: { marginBottom: 4 },
-			children: /* @__PURE__ */ $(F, {
+			children: /* @__PURE__ */ $(N, {
 				severity: "info",
-				children: [/* @__PURE__ */ Q(I, { children: e("Uploading cases and files.") }), e("Please wait while the cases and associated files are being uploaded. This may take a while depending on the number and size of the files being uploaded.")]
+				children: [/* @__PURE__ */ Q(P, { children: e("Uploading cases and files.") }), e("Please wait while the cases and associated files are being uploaded. This may take a while depending on the number and size of the files being uploaded.")]
 			})
 		}),
-		/* @__PURE__ */ Q(L, {
+		/* @__PURE__ */ Q(I, {
 			sx: {
 				marginBottom: 2,
 				marginTop: 4
 			},
-			children: /* @__PURE__ */ Q(ze, { value: v })
+			children: /* @__PURE__ */ Q(Re, { value: v })
 		}),
-		/* @__PURE__ */ Q(L, {
+		/* @__PURE__ */ Q(I, {
 			sx: { fontWeight: 700 },
 			children: b
 		})
-	] }) : /* @__PURE__ */ $(L, { children: [/* @__PURE__ */ $(L, { children: [
-		/* @__PURE__ */ Q(L, {
+	] }) : /* @__PURE__ */ $(I, { children: [/* @__PURE__ */ $(I, { children: [
+		/* @__PURE__ */ Q(I, {
 			sx: { marginY: 2 },
-			children: /* @__PURE__ */ Q(F, {
+			children: /* @__PURE__ */ Q(N, {
 				severity: "info",
-				children: /* @__PURE__ */ Q(I, { children: e("{{numCases}} cases are ready to be uploaded.", { numCases: k.length }) })
+				children: /* @__PURE__ */ Q(P, { children: e("{{numCases}} cases are ready to be uploaded.", { numCases: k.length }) })
 			})
 		}),
-		O.mappedSequenceFiles.length > 0 && /* @__PURE__ */ Q(L, {
+		O.mappedSequenceFiles.length > 0 && /* @__PURE__ */ Q(I, {
 			sx: { marginY: 2 },
-			children: /* @__PURE__ */ Q(F, {
+			children: /* @__PURE__ */ Q(N, {
 				severity: "info",
-				children: /* @__PURE__ */ Q(I, { children: e("{{numSequenceFiles}} genome files are ready to be uploaded.", { numSequenceFiles: O.mappedSequenceFiles.length }) })
+				children: /* @__PURE__ */ Q(P, { children: e("{{numSequenceFiles}} genome files are ready to be uploaded.", { numSequenceFiles: O.mappedSequenceFiles.length }) })
 			})
 		}),
-		O.mappedReadsFiles.length > 0 && /* @__PURE__ */ Q(L, {
+		O.mappedReadsFiles.length > 0 && /* @__PURE__ */ Q(I, {
 			sx: { marginY: 2 },
-			children: /* @__PURE__ */ Q(F, {
+			children: /* @__PURE__ */ Q(N, {
 				severity: "info",
-				children: /* @__PURE__ */ Q(I, { children: e("{{numReadsFiles}} reads files are ready to be uploaded.", { numReadsFiles: O.mappedReadsFiles.length }) })
+				children: /* @__PURE__ */ Q(P, { children: e("{{numReadsFiles}} reads files are ready to be uploaded.", { numReadsFiles: O.mappedReadsFiles.length }) })
 			})
 		}),
-		u.length - k.length > 0 && /* @__PURE__ */ Q(L, {
+		u.length - k.length > 0 && /* @__PURE__ */ Q(I, {
 			sx: { marginY: 2 },
-			children: /* @__PURE__ */ Q(F, {
+			children: /* @__PURE__ */ Q(N, {
 				severity: "warning",
-				children: /* @__PURE__ */ Q(I, { children: e("{{numCases}} cases were not selected and will not be uploaded.", { numCases: u.length - k.length }) })
+				children: /* @__PURE__ */ Q(P, { children: e("{{numCases}} cases were not selected and will not be uploaded.", { numCases: u.length - k.length }) })
 			})
 		}),
-		O.unmappedSequenceFiles.length > 0 && /* @__PURE__ */ Q(L, {
+		O.unmappedSequenceFiles.length > 0 && /* @__PURE__ */ Q(I, {
 			sx: { marginY: 2 },
-			children: /* @__PURE__ */ Q(F, {
+			children: /* @__PURE__ */ Q(N, {
 				severity: "warning",
-				children: /* @__PURE__ */ Q(I, { children: e("{{unmappedSequenceFiles}} unmapped genome files will not be uploaded.", { unmappedSequenceFiles: O.unmappedSequenceFiles.length }) })
+				children: /* @__PURE__ */ Q(P, { children: e("{{unmappedSequenceFiles}} unmapped genome files will not be uploaded.", { unmappedSequenceFiles: O.unmappedSequenceFiles.length }) })
 			})
 		}),
-		O.unmappedReadsFiles.length > 0 && /* @__PURE__ */ Q(L, {
+		O.unmappedReadsFiles.length > 0 && /* @__PURE__ */ Q(I, {
 			sx: { marginY: 2 },
-			children: /* @__PURE__ */ Q(F, {
+			children: /* @__PURE__ */ Q(N, {
 				severity: "warning",
-				children: /* @__PURE__ */ Q(I, { children: e("{{unmappedReadsFiles}} unmapped reads files will not be uploaded.", { unmappedReadsFiles: O.unmappedReadsFiles.length }) })
+				children: /* @__PURE__ */ Q(P, { children: e("{{unmappedReadsFiles}} unmapped reads files will not be uploaded.", { unmappedReadsFiles: O.unmappedReadsFiles.length }) })
 			})
 		})
 	] }), /* @__PURE__ */ Q(Ve, {
-		onGoBackButtonClick: M,
-		onProceedButtonClick: j,
+		onGoBackButtonClick: j,
+		onProceedButtonClick: A,
 		proceedLabel: "Start upload"
-	})] }), /* @__PURE__ */ Q(re, {
+	})] }), /* @__PURE__ */ Q(te, {
 		maxWidth: "xl",
 		sx: { height: "100%" },
-		children: N
+		children: F
 	});
-}, Qe = (e) => Array.from(e?.files ?? []), $e = ({ hasGenomeFiles: e, hasReadsFiles: t, hasSelectedFiles: n }) => D().shape({
-	assemblyProtocolId: e ? O().uuid4().required() : O().nullable().notRequired(),
-	sampleIdColId: n ? O().uuid4().required() : O().nullable().notRequired(),
-	sequencingProtocolId: t ? O().uuid4().required() : O().nullable().notRequired()
+}, Qe = (e) => Array.from(e?.files ?? []), $e = ({ hasGenomeFiles: e, hasReadsFiles: t, hasSelectedFiles: n }) => w().shape({
+	assemblyProtocolId: e ? T().uuid4().required() : T().nullable().notRequired(),
+	sampleIdColId: n ? T().uuid4().required() : T().nullable().notRequired(),
+	sequencingProtocolId: t ? T().uuid4().required() : T().nullable().notRequired()
 }), et = () => {
-	let { t: e } = X(), n = ue(), r = W(p), i = l(r, (e) => e.completeCaseType), a = l(r, (e) => e.mappedColumns), o = l(r, (e) => e.validatedCases), s = l(r, (e) => e.goToNextStep), c = l(r, (e) => e.goToPreviousStep), u = l(r, (e) => e.setSequenceFilesDataTransfer), d = l(r, (e) => e.sampleIdColId), f = l(r, (e) => e.sequenceFilesDataTransfer), [m, _] = Y(f), v = de(), y = w(), b = T(), x = _e([y, b]), S = q(() => a.filter((e) => e.isSampleIdColumn).map((e) => ({
+	let { t: e } = X(), n = se(), r = W(p), i = l(r, (e) => e.completeCaseType), a = l(r, (e) => e.mappedColumns), o = l(r, (e) => e.validatedCases), s = l(r, (e) => e.goToNextStep), c = l(r, (e) => e.goToPreviousStep), u = l(r, (e) => e.setSequenceFilesDataTransfer), d = l(r, (e) => e.sampleIdColId), f = l(r, (e) => e.sequenceFilesDataTransfer), [h, g] = Y(f), _ = ce(), v = x(), y = S(), b = me([v, y]), C = q(() => a.filter((e) => e.isSampleIdColumn).map((e) => ({
 		label: e.col.label,
 		value: e.col.id
-	})), [a]), E = q(() => Qe(m), [m]), D = E.length > 0, O = q(() => E.some((e) => t.isGenomeFile(e.name)), [E]), k = q(() => E.some((e) => t.isReadsFile(e.name)), [E]), A = q(() => $e({
-		hasGenomeFiles: O,
-		hasReadsFiles: k,
-		hasSelectedFiles: D
+	})), [a]), w = q(() => Qe(h), [h]), T = w.length > 0, E = q(() => w.some((e) => t.isGenomeFile(e.name)), [w]), D = q(() => w.some((e) => t.isReadsFile(e.name)), [w]), O = q(() => $e({
+		hasGenomeFiles: E,
+		hasReadsFiles: D,
+		hasSelectedFiles: T
 	}), [
-		O,
-		k,
-		D
-	]), j = q(() => ({
+		E,
+		D,
+		T
+	]), k = q(() => ({
 		assemblyProtocolId: r.getState().assemblyProtocolId ?? null,
 		sampleIdColId: r.getState().sampleIdColId ?? null,
 		sequencingProtocolId: r.getState().sequencingProtocolId ?? null
-	}), [r]), M = h({
-		defaultValues: j,
-		resolver: g(A),
-		values: j
-	}), { handleSubmit: ee, setValue: N } = M;
+	}), [r]), ee = _e({
+		defaultValues: k,
+		resolver: m(O),
+		values: k
+	}), { handleSubmit: A, setValue: M } = ee;
 	K(() => {
-		y.isLoading || b.isLoading || (r.getState().sequencingProtocolId || (N("sequencingProtocolId", y.options[0]?.value || null), r.setState({ sequencingProtocolId: y.options[0]?.value || null })), r.getState().assemblyProtocolId || (N("assemblyProtocolId", b.options[0]?.value || null), r.setState({ assemblyProtocolId: b.options[0]?.value || null })), r.getState().sampleIdColId || (N("sampleIdColId", S[0]?.value || null), r.setState({ sampleIdColId: S[0]?.value || null })));
+		v.isLoading || y.isLoading || (r.getState().sequencingProtocolId || (M("sequencingProtocolId", v.options[0]?.value || null), r.setState({ sequencingProtocolId: v.options[0]?.value || null })), r.getState().assemblyProtocolId || (M("assemblyProtocolId", y.options[0]?.value || null), r.setState({ assemblyProtocolId: y.options[0]?.value || null })), r.getState().sampleIdColId || (M("sampleIdColId", C[0]?.value || null), r.setState({ sampleIdColId: C[0]?.value || null })));
 	}, [
-		b.isLoading,
-		b.options,
 		y.isLoading,
 		y.options,
-		N,
+		v.isLoading,
+		v.options,
+		M,
 		r,
-		S
+		C
 	]);
-	let te = G((e) => {
+	let F = G((e) => {
 		r.setState({ sequencingProtocolId: e });
-	}, [r]), ne = G((e) => {
+	}, [r]), L = G((e) => {
 		r.setState({ assemblyProtocolId: e });
-	}, [r]), R = G((e) => {
+	}, [r]), te = G((e) => {
 		r.setState({ sampleIdColId: e });
-	}, [r]), re = q(() => [
+	}, [r]), ne = q(() => [
 		{
-			definition: P.SELECT,
+			definition: j.SELECT,
 			label: e`Genome files: assembly protocol`,
-			loading: b.isLoading,
+			loading: y.isLoading,
 			name: "assemblyProtocolId",
-			onChange: ne,
-			options: b.options
+			onChange: L,
+			options: y.options
 		},
 		{
-			definition: P.SELECT,
+			definition: j.SELECT,
 			label: e`Reads files: sequencing protocol`,
-			loading: y.isLoading,
+			loading: v.isLoading,
 			name: "sequencingProtocolId",
-			onChange: te,
-			options: y.options
+			onChange: F,
+			options: v.options
 		},
 		{
-			definition: P.SELECT,
+			definition: j.SELECT,
 			label: e`Sample ID column`,
 			name: "sampleIdColId",
-			onChange: R,
-			options: S
+			onChange: te,
+			options: C
 		}
 	], [
-		b.isLoading,
-		b.options,
-		ne,
-		R,
-		te,
-		S,
 		y.isLoading,
 		y.options,
+		L,
+		te,
+		F,
+		C,
+		v.isLoading,
+		v.options,
 		e
-	]), z = q(() => a.some((e) => e.isSampleIdColumn && e.sampleIdentifierIssuerId), [a]), B = q(() => d ? o.some((e) => e.validated_content[d]?.trim().length > 0) : !1, [d, o]), ie = q(() => t.getCompleteCaseTypeColStats(i), [i]), V = q(() => ie.sequenceColumns.length > 0, [ie]), H = q(() => ie.readsColumns.length > 0, [ie]), U = q(() => z && B && (V || H), [
+	]), R = q(() => a.some((e) => e.isSampleIdColumn && e.sampleIdentifierIssuerId), [a]), z = q(() => d ? o.some((e) => e.validated_content[d]?.trim().length > 0) : !1, [d, o]), B = q(() => t.getCompleteCaseTypeColStats(i), [i]), V = q(() => B.sequenceColumns.length > 0, [B]), H = q(() => B.readsColumns.length > 0, [B]), U = q(() => R && z && (V || H), [
+		R,
 		z,
-		B,
 		V,
 		H
-	]), ae = q(() => {
+	]), re = q(() => {
 		let e = "";
 		return V && (e += ".fa,.fasta,.fa.gz,.fasta.gz,"), H && (e += ".fq,.fastq,.fq.gz,.fastq.gz,"), e;
-	}, [H, V]), oe = G(async () => {
-		u(U ? m : new DataTransfer()), await ee(async () => {
+	}, [H, V]), ie = G(async () => {
+		u(U ? h : new DataTransfer()), await A(async () => {
 			await s();
 		})();
 	}, [
 		U,
-		m,
+		h,
 		s,
-		ee,
+		A,
 		u
-	]), se = G(() => {
+	]), ae = G(() => {
 		c();
-	}, [c]), ce = G((e) => {
-		_(e), u(e);
-	}, [u]), le = G((e) => /* @__PURE__ */ Q(L, {
+	}, [c]), oe = G((e) => {
+		g(e), u(e);
+	}, [u]), J = G((e) => /* @__PURE__ */ Q(I, {
 		sx: {
 			display: "grid",
 			gap: n.spacing(1),
 			gridTemplateColumns: "1fr 1fr 1fr"
 		},
 		children: e
-	}), [n]), J = q(() => z ? B ? H ? V ? null : {
+	}), [n]), le = q(() => R ? z ? H ? V ? null : {
 		message: e`The selected case type does not support uploading sequence files.`,
 		title: e("Uploading of sequence files is disabled.")
 	} : {
@@ -1187,13 +1191,13 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	}, [
 		H,
 		V,
-		B,
 		z,
+		R,
 		e
-	]), fe = G(() => {}, []);
-	return /* @__PURE__ */ Q(he, {
-		loadables: x,
-		children: /* @__PURE__ */ $(L, {
+	]), ue = G(() => {}, []);
+	return /* @__PURE__ */ Q(fe, {
+		loadables: b,
+		children: /* @__PURE__ */ $(I, {
 			sx: {
 				display: "grid",
 				gridTemplateRows: `${U ? "" : "max-content "}max-content auto max-content`,
@@ -1201,46 +1205,46 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 				position: "relative"
 			},
 			children: [
-				!U && /* @__PURE__ */ Q(L, {
+				!U && /* @__PURE__ */ Q(I, {
 					sx: { marginBottom: 2 },
-					children: /* @__PURE__ */ $(F, {
+					children: /* @__PURE__ */ $(N, {
 						severity: "error",
-						children: [/* @__PURE__ */ Q(I, { children: J.title }), J.message]
+						children: [/* @__PURE__ */ Q(P, { children: le.title }), le.message]
 					})
 				}),
-				/* @__PURE__ */ $(L, {
+				/* @__PURE__ */ $(I, {
 					sx: { borderBottom: `1px solid ${n.palette.divider}` },
 					children: [
-						/* @__PURE__ */ Q(L, {
+						/* @__PURE__ */ Q(I, {
 							sx: { maxWidth: n.spacing(128) },
-							children: /* @__PURE__ */ Q(be, {
-								formFieldDefinitions: re,
-								formId: v,
-								formMethods: M,
-								onSubmit: fe,
-								schema: A,
-								wrapForm: le
+							children: /* @__PURE__ */ Q(ye, {
+								formFieldDefinitions: ne,
+								formId: _,
+								formMethods: ee,
+								onSubmit: ue,
+								schema: O,
+								wrapForm: J
 							})
 						}),
-						!V && /* @__PURE__ */ Q(L, {
+						!V && /* @__PURE__ */ Q(I, {
 							sx: { marginY: 1 },
-							children: /* @__PURE__ */ $(F, {
+							children: /* @__PURE__ */ $(N, {
 								severity: "info",
-								children: [/* @__PURE__ */ Q(I, { children: e("Uploading of sequences has been disabled.") }), /* @__PURE__ */ Q(L, { children: e("Uploading of sequences is not supported for the selected case type.") })]
+								children: [/* @__PURE__ */ Q(P, { children: e("Uploading of sequences has been disabled.") }), /* @__PURE__ */ Q(I, { children: e("Uploading of sequences is not supported for the selected case type.") })]
 							})
 						}),
-						!H && /* @__PURE__ */ Q(L, {
+						!H && /* @__PURE__ */ Q(I, {
 							sx: { marginY: 1 },
-							children: /* @__PURE__ */ $(F, {
+							children: /* @__PURE__ */ $(N, {
 								severity: "info",
-								children: [/* @__PURE__ */ Q(I, { children: e("Uploading of read files has been disabled.") }), /* @__PURE__ */ Q(L, { children: e("Uploading of read files is not supported for the selected case type.") })]
+								children: [/* @__PURE__ */ Q(P, { children: e("Uploading of read files has been disabled.") }), /* @__PURE__ */ Q(I, { children: e("Uploading of read files is not supported for the selected case type.") })]
 							})
 						})
 					]
 				}),
-				/* @__PURE__ */ Q(L, {
+				/* @__PURE__ */ Q(I, {
 					sx: { position: "relative" },
-					children: /* @__PURE__ */ Q(L, {
+					children: /* @__PURE__ */ Q(I, {
 						sx: {
 							bottom: 0,
 							height: "100%",
@@ -1249,27 +1253,27 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 							right: 0,
 							top: 0
 						},
-						children: U && /* @__PURE__ */ Q(C, {
-							accept: ae,
+						children: U && /* @__PURE__ */ Q(Be, {
+							accept: re,
 							initialDataTransfer: f,
 							numFilesAllowed: Infinity,
-							onDataTransferChange: ce
+							onDataTransferChange: oe
 						})
 					})
 				}),
 				/* @__PURE__ */ Q(Ve, {
-					onGoBackButtonClick: se,
-					onProceedButtonClick: oe,
+					onGoBackButtonClick: ae,
+					onProceedButtonClick: ie,
 					proceedLabel: U ? void 0 : e`Proceed`
 				})
 			]
 		})
 	});
 }, tt = () => {
-	let { t: e } = X(), n = ue(), r = W(p), i = l(r, (e) => e.goToNextStep), o = l(r, (e) => e.goToPreviousStep), s = l(r, (e) => e.completeCaseType), c = l(r, (e) => e.sampleIdColId), u = l(r, (e) => e.sequenceFilesDataTransfer), f = l(r, d((e) => {
+	let { t: e } = X(), n = se(), r = W(p), i = l(r, (e) => e.goToNextStep), o = l(r, (e) => e.goToPreviousStep), s = l(r, (e) => e.completeCaseType), c = l(r, (e) => e.sampleIdColId), u = l(r, (e) => e.sequenceFilesDataTransfer), f = l(r, d((e) => {
 		let t = e.selectedIdsForUpload;
 		return e.validatedCases.filter((e) => t.includes(e.id));
-	})), m = l(r, (e) => e.setSequenceMapping), h = q(() => t.getCompleteCaseTypeColStats(s), [s]), g = de(), _ = de(), v = J(r.getState().sequenceMapping), y = G(async () => {
+	})), m = l(r, (e) => e.setSequenceMapping), h = q(() => t.getCompleteCaseTypeColStats(s), [s]), g = ce(), _ = ce(), v = J(r.getState().sequenceMapping), y = G(async () => {
 		m(v.current), await i();
 	}, [m, i]), b = G(() => {
 		o();
@@ -1290,19 +1294,19 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 	K(() => {
 		x();
 	}, [x]);
-	let S = q(() => pe({ idSelectorCallback: (e) => e.id }), []), C = G((e, t) => e.some((e) => {
+	let S = q(() => ue({ idSelectorCallback: (e) => e.id }), []), C = G((e, t) => e.some((e) => {
 		let n = a.getRowValue(e.validated_content, t, s);
 		return n && !n?.isMissing;
 	}), [s]), w = q(() => Array.from(u.files).map((e) => e.name).filter((e) => e.endsWith(".fasta") || e.endsWith(".fa") || e.endsWith(".fa.gz") || e.endsWith(".fasta.gz")), [u.files]), T = q(() => Array.from(u.files).map((e) => e.name).filter((e) => e.endsWith(".fastq") || e.endsWith(".fq") || e.endsWith(".fq.gz") || e.endsWith(".fastaq.gz")), [u.files]), E = G((e) => {
 		let { dropDownOptions: t, dropDownValue: n, label: r, onChange: i } = e;
-		return /* @__PURE__ */ Q(ne, {
+		return /* @__PURE__ */ Q(F, {
 			freeSolo: !0,
 			fullWidth: !0,
 			onChange: (e, t) => {
 				i(t), m(v.current), x();
 			},
 			options: t,
-			renderInput: (e) => /* @__PURE__ */ Q(se, {
+			renderInput: (e) => /* @__PURE__ */ Q(ie, {
 				...e,
 				label: r,
 				size: "small"
@@ -1312,7 +1316,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		});
 	}, [m, x]), D = G((e) => {
 		let t = s.cols[e.id], n = e.row.id, r = v.current?.[e.row.id]?.sequenceFileNames[t.id] || "";
-		return /* @__PURE__ */ Q(L, {
+		return /* @__PURE__ */ Q(I, {
 			sx: {
 				alignItems: "center",
 				display: "flex",
@@ -1335,7 +1339,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		w
 	]), O = G((e) => {
 		let t = s.cols[e.id], n = h.sequenceColumns.includes(t), r = e.row.id, i = v.current?.[r]?.readsFileNames?.[t.id]?.fwd || "", a = v.current?.[r]?.readsFileNames?.[t.id]?.rev || "";
-		return /* @__PURE__ */ $(L, {
+		return /* @__PURE__ */ $(I, {
 			sx: {
 				alignItems: "center",
 				display: "flex",
@@ -1368,7 +1372,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		T
 	]), k = q(() => {
 		let e = [];
-		e.push(Me.createReadableIndexColumn());
+		e.push(je.createReadableIndexColumn());
 		let t = [
 			...h.sampleIdColumns,
 			...h.sequenceColumns,
@@ -1440,26 +1444,26 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		c,
 		f
 	]);
-	return Ne({
+	return Me({
 		columns: k,
 		createFiltersFromColumns: !0,
 		rows: f,
 		store: S
-	}), /* @__PURE__ */ $(L, {
+	}), /* @__PURE__ */ $(I, {
 		sx: {
 			display: "grid",
 			gridTemplateRows: "max-content auto max-content",
 			height: "100%"
 		},
-		children: [/* @__PURE__ */ Q(L, {
+		children: [/* @__PURE__ */ Q(I, {
 			sx: { paddingBottom: 1 },
-			children: /* @__PURE__ */ $(F, {
+			children: /* @__PURE__ */ $(N, {
 				severity: "info",
-				children: [/* @__PURE__ */ Q(I, { id: g }), /* @__PURE__ */ Q(L, { id: _ })]
+				children: [/* @__PURE__ */ Q(P, { id: g }), /* @__PURE__ */ Q(I, { id: _ })]
 			})
-		}), /* @__PURE__ */ $(fe, {
+		}), /* @__PURE__ */ $(le, {
 			store: S,
-			children: [/* @__PURE__ */ Q(ke, {
+			children: [/* @__PURE__ */ Q(Oe, {
 				font: n["gen-epix-ui-client-casedb"].lineList.font,
 				rowHeight: 7
 			}), /* @__PURE__ */ Q(Ve, {
@@ -1469,7 +1473,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		})]
 	});
 }, nt = () => {
-	let { t: e } = X(), t = ue(), n = W(p), r = l(n, (e) => e.completeCaseType), i = l(n, (e) => e.activeStep), a = l(n, (e) => e.stepOrder), o = q(() => ({
+	let { t: e } = X(), t = se(), n = W(p), r = l(n, (e) => e.completeCaseType), i = l(n, (e) => e.activeStep), a = l(n, (e) => e.stepOrder), o = q(() => ({
 		[f.CREATE_CASES]: e`Submit`,
 		[f.MAP_COLUMNS]: e`Map columns`,
 		[f.MAP_SEQUENCES]: e`Map sequences`,
@@ -1485,7 +1489,7 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 		o,
 		a
 	]);
-	return /* @__PURE__ */ $(ve, {
+	return /* @__PURE__ */ $(he, {
 		sx: {
 			display: "grid",
 			gridTemplateRows: "max-content auto",
@@ -1493,11 +1497,11 @@ var Ve = ({ backLabel: e, onGoBackButtonClick: t, onProceedButtonClick: n, proce
 			position: "relative",
 			width: "100%"
 		},
-		children: [/* @__PURE__ */ Q(re, { children: /* @__PURE__ */ Q(ye, {
+		children: [/* @__PURE__ */ Q(te, { children: /* @__PURE__ */ Q(ge, {
 			activeStep: String(i),
 			steps: c,
 			sx: { marginY: 2 }
-		}) }), /* @__PURE__ */ $(ve, {
+		}) }), /* @__PURE__ */ $(he, {
 			sx: {
 				height: `calc(100% - ${t.spacing(4)})`,
 				marginBottom: 2,