@geminilight/mindos 1.1.6 → 1.1.8

package/dist/server/handlers/graph.js

@@ -1,7 +1,7 @@
 import { createHash } from 'node:crypto';
-import { extname, posix } from 'node:path';
+import { posix } from 'node:path';
 import { queryValue } from '../context.js';
-import { collectAllFilesFromMindRoot, readTextFileFromMindRoot } from '../runtime.js';
+import { getLinkSnapshot, normalizeTargetPath } from '../link-index.js';
 import { json, publicCacheHeaders } from '../response.js';
 export function handleGraph(services) {
     const graph = buildGraphData(services);
@@ -13,7 +13,7 @@ export function handleBacklinks(query, services) {
         return json({ error: 'path required' }, { status: 400 });
     }
     const snippets = new Map();
-    for (const hit of collectLinkHits(services)) {
+    for (const hit of getLinkSnapshot(services).hits) {
         if (hit.target !== target)
             continue;
         const list = snippets.get(hit.source) ?? [];
@@ -29,15 +29,15 @@ export function handleBacklinks(query, services) {
     return json(backlinks, { headers: publicCacheHeaders(300, generateETag(backlinks)) });
 }
 function buildGraphData(services) {
-    const files = collectMarkdownFiles(services);
-    const nodes = files.map((filePath) => ({
+    const snapshot = getLinkSnapshot(services);
+    const nodes = snapshot.files.map((filePath) => ({
         id: filePath,
         label: posix.basename(filePath, '.md'),
         folder: posix.dirname(filePath),
     }));
     const edgeKeys = new Set();
     const edges = [];
-    for (const hit of collectLinkHits(services, files)) {
+    for (const hit of snapshot.hits) {
         if (hit.source === hit.target)
             continue;
         const key = `${hit.source}\0${hit.target}`;
@@ -49,115 +49,6 @@ function buildGraphData(services) {
     edges.sort((a, b) => a.source.localeCompare(b.source) || a.target.localeCompare(b.target));
     return { nodes, edges };
 }
-function collectLinkHits(services, markdownFiles = collectMarkdownFiles(services)) {
-    const fileSet = new Set(markdownFiles);
-    const basenameMap = buildBasenameMap(markdownFiles);
-    const hits = [];
-    for (const source of markdownFiles) {
-        let content = '';
-        try {
-            content = readText(services, source);
-        }
-        catch {
-            continue;
-        }
-        hits.push(...extractLinkHits(content, source, fileSet, basenameMap));
-    }
-    return hits;
-}
-function collectMarkdownFiles(services) {
-    const files = services.collectAllFiles
-        ? services.collectAllFiles()
-        : services.mindRoot
-            ? collectAllFilesFromMindRoot(services.mindRoot)
-            : [];
-    return files
-        .filter((filePath) => extname(filePath).toLowerCase() === '.md')
-        .map(normalizeTargetPath)
-        .filter((filePath) => !!filePath)
-        .sort((a, b) => a.localeCompare(b));
-}
-function readText(services, filePath) {
-    if (services.readTextFile)
-        return services.readTextFile(filePath);
-    if (services.mindRoot)
-        return readTextFileFromMindRoot(services.mindRoot, filePath);
-    throw new Error('readTextFile service required');
-}
-function buildBasenameMap(files) {
-    const map = new Map();
-    for (const filePath of files) {
-        const key = posix.basename(filePath).toLowerCase();
-        const values = map.get(key) ?? [];
-        values.push(filePath);
-        map.set(key, values);
-    }
-    return map;
-}
-function extractLinkHits(content, source, fileSet, basenameMap) {
-    const hits = [];
-    const sourceDir = posix.dirname(source);
-    const lines = content.split(/\r?\n/);
-    for (const line of lines) {
-        const snippet = line.trim();
-        if (!snippet)
-            continue;
-        const wikiRe = /\[\[([^\]|#]+)(?:#[^\]|]+)?(?:\|[^\]]+)?\]\]/g;
-        let match;
-        while ((match = wikiRe.exec(line)) !== null) {
-            const target = resolveLinkTarget(match[1], sourceDir, fileSet, basenameMap, false);
-            if (target)
-                hits.push({ source, target, snippet });
-        }
-        const markdownRe = /\[[^\]]+\]\(([^)#]+)(?:#[^)]+)?\)/g;
-        while ((match = markdownRe.exec(line)) !== null) {
-            const target = resolveLinkTarget(match[1], sourceDir, fileSet, basenameMap, true);
-            if (target)
-                hits.push({ source, target, snippet });
-        }
-    }
-    return hits;
-}
-function resolveLinkTarget(rawTarget, sourceDir, fileSet, basenameMap, relativeToSource) {
-    const target = normalizeTargetPath(rawTarget);
-    if (!target || /^(https?:|mailto:|tel:)/i.test(target))
-        return undefined;
-    const candidates = new Set();
-    candidates.add(target);
-    candidates.add(target.endsWith('.md') ? target : `${target}.md`);
-    if (relativeToSource) {
-        candidates.add(posix.normalize(posix.join(sourceDir, target)));
-        candidates.add(posix.normalize(posix.join(sourceDir, target.endsWith('.md') ? target : `${target}.md`)));
-    }
-    for (const candidate of candidates) {
-        if (fileSet.has(candidate))
-            return candidate;
-    }
-    const basename = posix.basename(target.endsWith('.md') ? target : `${target}.md`).toLowerCase();
-    const basenameMatches = basenameMap.get(basename);
-    if (basenameMatches?.length === 1)
-        return basenameMatches[0];
-    return undefined;
-}
-function normalizeTargetPath(value) {
-    if (!value)
-        return undefined;
-    let normalized = value.trim();
-    if (!normalized)
-        return undefined;
-    try {
-        normalized = decodeURIComponent(normalized);
-    }
-    catch {
-        // Keep the original value if it is not a valid URI component.
-    }
-    normalized = normalized.split('#')[0]?.trim() ?? '';
-    normalized = normalized.replace(/\\/g, '/').replace(/^\/+/, '');
-    normalized = posix.normalize(normalized);
-    if (!normalized || normalized === '.' || normalized.startsWith('../') || normalized === '..')
-        return undefined;
-    return normalized;
-}
 function generateETag(value) {
     return `"${createHash('sha1').update(JSON.stringify(value)).digest('hex')}"`;
 }

package/dist/server/handlers/graph.js.map

@@ -1 +1 @@
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package/dist/server/handlers/jsonl-log.d.ts

@@ -0,0 +1,56 @@
+/**
+ * Generic append-only JSONL log store.
+ *
+ * Replaces the previous "read whole file -> unshift -> pretty-print rewrite"
+ * pattern (O(N) per event, O(N^2) per batch) with O(1) line appends plus an
+ * amortized size-capped compaction.
+ *
+ * On-disk layout:
+ * - `<file>`: one JSON object per line, oldest-first (newest at EOF).
+ * - `<metaFile>`: small sidecar `{ version: 2, lastSeenAt, legacy }`. Its
+ *   presence marks that `<file>` is in JSONL format, so appends never need to
+ *   re-read the log to detect the legacy pretty-printed format.
+ */
+export interface JsonlLogMeta {
+    version: 2;
+    lastSeenAt: string | null;
+    legacy: Record<string, number | string | null>;
+}
+export interface JsonlCompactionConfig {
+    /** Newest entries kept when the log is compacted. */
+    maxEvents: number;
+    /** Compaction triggers once the file grows beyond this many bytes. */
+    maxBytes: number;
+    /** Compaction additionally drops oldest entries until at most this size. */
+    targetBytes: number;
+}
+export declare function readJsonlMeta(metaFile: string): JsonlLogMeta | null;
+export declare function writeJsonlMeta(metaFile: string, meta: JsonlLogMeta): void;
+/**
+ * Guarantees the log file is in JSONL format and returns its sidecar meta.
+ *
+ * On first contact with a legacy pretty-printed `{ events: [...] }` state file
+ * it rewrites the log once as JSONL. Legacy arrays are newest-first; on disk we
+ * store oldest-first so plain appends keep chronological order. `lastSeenAt`
+ * and legacy import counters are carried into the meta sidecar.
+ *
+ * Pure reads on a store that needs no migration do not write anything unless
+ * `persistIfMissing` is set (used by appenders so later appends skip the scan).
+ */
+export declare function ensureJsonlStore(file: string, metaFile: string, options?: {
+    persistIfMissing?: boolean;
+}): JsonlLogMeta;
+/** Appends events (oldest-first input order) as a single write, then compacts if oversized. */
+export declare function appendJsonlEvents(file: string, metaFile: string, events: unknown[], config: JsonlCompactionConfig): void;
+/** Returns parsed events newest-first; corrupted lines are skipped. */
+export declare function readJsonlEvents(file: string, metaFile: string): {
+    events: unknown[];
+    meta: JsonlLogMeta;
+};
+/**
+ * Rewrites the log keeping only the newest `maxEvents` entries (and at most
+ * `targetBytes` of them) once it grows past `maxBytes`. Amortized: appends stay
+ * O(1) and the occasional compaction is one bounded rewrite.
+ */
+export declare function compactJsonlIfNeeded(file: string, config: JsonlCompactionConfig): void;
+//# sourceMappingURL=jsonl-log.d.ts.map

package/dist/server/handlers/jsonl-log.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"jsonl-log.d.ts","sourceRoot":"","sources":["../../../src/server/handlers/jsonl-log.ts"],"names":[],"mappings":"AAYA;;;;;;;;;;;;GAYG;AAEH,MAAM,WAAW,YAAY;IAC3B,OAAO,EAAE,CAAC,CAAC;IACX,UAAU,EAAE,MAAM,GAAG,IAAI,CAAC;IAC1B,MAAM,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,GAAG,MAAM,GAAG,IAAI,CAAC,CAAC;CAChD;AAED,MAAM,WAAW,qBAAqB;IACpC,qDAAqD;IACrD,SAAS,EAAE,MAAM,CAAC;IAClB,sEAAsE;IACtE,QAAQ,EAAE,MAAM,CAAC;IACjB,4EAA4E;IAC5E,WAAW,EAAE,MAAM,CAAC;CACrB;AAyCD,wBAAgB,aAAa,CAAC,QAAQ,EAAE,MAAM,GAAG,YAAY,GAAG,IAAI,CAenE;AAED,wBAAgB,cAAc,CAAC,QAAQ,EAAE,MAAM,EAAE,IAAI,EAAE,YAAY,GAAG,IAAI,CAEzE;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,gBAAgB,CAC9B,IAAI,EAAE,MAAM,EACZ,QAAQ,EAAE,MAAM,EAChB,OAAO,GAAE;IAAE,gBAAgB,CAAC,EAAE,OAAO,CAAA;CAAO,GAC3C,YAAY,CAuBd;AAED,+FAA+F;AAC/F,wBAAgB,iBAAiB,CAC/B,IAAI,EAAE,MAAM,EACZ,QAAQ,EAAE,MAAM,EAChB,MAAM,EAAE,OAAO,EAAE,EACjB,MAAM,EAAE,qBAAqB,GAC5B,IAAI,CAMN;AAED,uEAAuE;AACvE,wBAAgB,eAAe,CAC7B,IAAI,EAAE,MAAM,EACZ,QAAQ,EAAE,MAAM,GACf;IAAE,MAAM,EAAE,OAAO,EAAE,CAAC;IAAC,IAAI,EAAE,YAAY,CAAA;CAAE,CAgB3C;AAED;;;;GAIG;AACH,wBAAgB,oBAAoB,CAAC,IAAI,EAAE,MAAM,EAAE,MAAM,EAAE,qBAAqB,GAAG,IAAI,CAmBtF"}

package/dist/server/handlers/jsonl-log.js

@@ -0,0 +1,153 @@
+import { appendFileSync, existsSync, mkdirSync, readFileSync, renameSync, statSync, unlinkSync, writeFileSync, } from 'node:fs';
+import { dirname } from 'node:path';
+function defaultMeta() {
+    return { version: 2, lastSeenAt: null, legacy: {} };
+}
+function parseLegacyStateFile(raw) {
+    try {
+        const parsed = JSON.parse(raw);
+        if (parsed
+            && typeof parsed === 'object'
+            && !Array.isArray(parsed)
+            && Array.isArray(parsed.events)) {
+            return parsed;
+        }
+    }
+    catch {
+        // Not a single JSON document: already JSONL (or corrupted lines we skip on read).
+    }
+    return null;
+}
+function atomicWrite(file, content) {
+    mkdirSync(dirname(file), { recursive: true });
+    const tmp = `${file}.${process.pid}.${Date.now()}.tmp`;
+    try {
+        writeFileSync(tmp, content, 'utf-8');
+        renameSync(tmp, file);
+    }
+    catch (error) {
+        try {
+            unlinkSync(tmp);
+        }
+        catch { /* ignore cleanup errors */ }
+        throw error;
+    }
+}
+export function readJsonlMeta(metaFile) {
+    try {
+        if (!existsSync(metaFile))
+            return null;
+        const parsed = JSON.parse(readFileSync(metaFile, 'utf-8'));
+        if (!parsed || typeof parsed !== 'object')
+            return null;
+        return {
+            version: 2,
+            lastSeenAt: typeof parsed.lastSeenAt === 'string' ? parsed.lastSeenAt : null,
+            legacy: parsed.legacy && typeof parsed.legacy === 'object' && !Array.isArray(parsed.legacy)
+                ? { ...parsed.legacy }
+                : {},
+        };
+    }
+    catch {
+        return null;
+    }
+}
+export function writeJsonlMeta(metaFile, meta) {
+    atomicWrite(metaFile, `${JSON.stringify(meta, null, 2)}\n`);
+}
+/**
+ * Guarantees the log file is in JSONL format and returns its sidecar meta.
+ *
+ * On first contact with a legacy pretty-printed `{ events: [...] }` state file
+ * it rewrites the log once as JSONL. Legacy arrays are newest-first; on disk we
+ * store oldest-first so plain appends keep chronological order. `lastSeenAt`
+ * and legacy import counters are carried into the meta sidecar.
+ *
+ * Pure reads on a store that needs no migration do not write anything unless
+ * `persistIfMissing` is set (used by appenders so later appends skip the scan).
+ */
+export function ensureJsonlStore(file, metaFile, options = {}) {
+    const existing = readJsonlMeta(metaFile);
+    if (existing)
+        return existing;
+    const meta = defaultMeta();
+    let migrated = false;
+    if (existsSync(file)) {
+        const legacyState = parseLegacyStateFile(readFileSync(file, 'utf-8'));
+        if (legacyState) {
+            const lines = [...legacyState.events]
+                .reverse()
+                .filter((event) => event !== null && typeof event === 'object')
+                .map((event) => JSON.stringify(event));
+            if (typeof legacyState.lastSeenAt === 'string')
+                meta.lastSeenAt = legacyState.lastSeenAt;
+            if (legacyState.legacy && typeof legacyState.legacy === 'object' && !Array.isArray(legacyState.legacy)) {
+                meta.legacy = { ...legacyState.legacy };
+            }
+            atomicWrite(file, lines.length > 0 ? `${lines.join('\n')}\n` : '');
+            migrated = true;
+        }
+    }
+    if (migrated || options.persistIfMissing)
+        writeJsonlMeta(metaFile, meta);
+    return meta;
+}
+/** Appends events (oldest-first input order) as a single write, then compacts if oversized. */
+export function appendJsonlEvents(file, metaFile, events, config) {
+    ensureJsonlStore(file, metaFile, { persistIfMissing: true });
+    if (events.length === 0)
+        return;
+    mkdirSync(dirname(file), { recursive: true });
+    appendFileSync(file, events.map((event) => `${JSON.stringify(event)}\n`).join(''), 'utf-8');
+    compactJsonlIfNeeded(file, config);
+}
+/** Returns parsed events newest-first; corrupted lines are skipped. */
+export function readJsonlEvents(file, metaFile) {
+    const meta = ensureJsonlStore(file, metaFile);
+    if (!existsSync(file))
+        return { events: [], meta };
+    const events = [];
+    for (const line of readFileSync(file, 'utf-8').split('\n')) {
+        const trimmed = line.trim();
+        if (!trimmed)
+            continue;
+        try {
+            const parsed = JSON.parse(trimmed);
+            if (parsed !== null && typeof parsed === 'object' && !Array.isArray(parsed))
+                events.push(parsed);
+        }
+        catch {
+            // Skip corrupted line: a partial append must not poison the whole log.
+        }
+    }
+    events.reverse();
+    return { events, meta };
+}
+/**
+ * Rewrites the log keeping only the newest `maxEvents` entries (and at most
+ * `targetBytes` of them) once it grows past `maxBytes`. Amortized: appends stay
+ * O(1) and the occasional compaction is one bounded rewrite.
+ */
+export function compactJsonlIfNeeded(file, config) {
+    let size;
+    try {
+        size = statSync(file).size;
+    }
+    catch {
+        return;
+    }
+    if (size <= config.maxBytes)
+        return;
+    const lines = readFileSync(file, 'utf-8').split('\n').filter((line) => line.trim().length > 0);
+    let kept = lines.slice(-config.maxEvents);
+    let bytes = kept.reduce((sum, line) => sum + Buffer.byteLength(line, 'utf-8') + 1, 0);
+    let drop = 0;
+    while (drop < kept.length - 1 && bytes > config.targetBytes) {
+        bytes -= Buffer.byteLength(kept[drop] ?? '', 'utf-8') + 1;
+        drop += 1;
+    }
+    if (drop > 0)
+        kept = kept.slice(drop);
+    atomicWrite(file, kept.length > 0 ? `${kept.join('\n')}\n` : '');
+}
+//# sourceMappingURL=jsonl-log.js.map

package/dist/server/handlers/jsonl-log.js.map

@@ -0,0 +1 @@
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package/dist/server/handlers/monitoring.d.ts

@@ -20,6 +20,13 @@ export type MonitoringHandlerServices = {
     };
     nodeVersion?: string;
     mcpPort?: number;
+    /**
+     * Monotonic tree version (e.g. the standalone server's tree cache or the
+     * web app's peekTreeVersion). When provided, the knowledge-base walk is
+     * cached until the version changes; otherwise a short TTL bounds the walk
+     * frequency.
+     */
+    getTreeVersion?: () => number;
 };
 export type MonitoringPayload = {
     system: {
@@ -43,4 +50,5 @@ export type MonitoringPayload = {
     };
 };
 export declare function handleMonitoringGet(services: MonitoringHandlerServices): MindosServerResponse<MonitoringPayload>;
+export declare function resetMonitoringStatsCacheForTests(): void;
 //# sourceMappingURL=monitoring.d.ts.map

package/dist/server/handlers/monitoring.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"monitoring.d.ts","sourceRoot":"","sources":["../../../src/server/handlers/monitoring.ts"],"names":[],"mappings":"AAEA,OAAO,EAAQ,KAAK,oBAAoB,EAAE,MAAM,gBAAgB,CAAC;AAGjE,MAAM,MAAM,yBAAyB,GAAG;IACtC,gBAAgB,EAAE,MAAM,CAAC;IACzB,aAAa,EAAE,MAAM,CAAC;IACtB,cAAc,EAAE,MAAM,CAAC;IACvB,WAAW,EAAE;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,MAAM,EAAE,MAAM,CAAA;KAAE,CAAC;IAC/C,iBAAiB,EAAE,MAAM,CAAC;IAC1B,MAAM,EAAE,MAAM,CAAC;CAChB,CAAC;AAEF,MAAM,MAAM,yBAAyB,GAAG;IACtC,QAAQ,EAAE,MAAM,CAAC;IACjB,eAAe,CAAC,EAAE,MAAM,yBAAyB,CAAC;IAClD,WAAW,CAAC,EAAE,MAAM;QAAE,QAAQ,EAAE,MAAM,CAAC;QAAC,SAAS,EAAE,MAAM,CAAC;QAAC,GAAG,EAAE,MAAM,CAAA;KAAE,CAAC;IACzE,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB;;;;;OAKG;IACH,cAAc,CAAC,EAAE,MAAM,MAAM,CAAC;CAC/B,CAAC;AAEF,MAAM,MAAM,iBAAiB,GAAG;IAC9B,MAAM,EAAE;QACN,QAAQ,EAAE,MAAM,CAAC;QACjB,MAAM,EAAE;YAAE,QAAQ,EAAE,MAAM,CAAC;YAAC,SAAS,EAAE,MAAM,CAAC;YAAC,GAAG,EAAE,MAAM,CAAA;SAAE,CAAC;QAC7D,WAAW,EAAE,MAAM,CAAC;KACrB,CAAC;IACF,WAAW,EAAE,IAAI,CAAC,yBAAyB,EAAE,kBAAkB,CAAC,CAAC;IACjE,aAAa,EAAE;QACb,IAAI,EAAE,MAAM,CAAC;QACb,SAAS,EAAE,MAAM,CAAC;QAClB,cAAc,EAAE,MAAM,CAAC;KACxB,CAAC;IACF,GAAG,EAAE;QACH,OAAO,EAAE,OAAO,CAAC;QACjB,IAAI,EAAE,MAAM,CAAC;KACd,CAAC;CACH,CAAC;AAEF,wBAAgB,mBAAmB,CACjC,QAAQ,EAAE,yBAAyB,GAClC,oBAAoB,CAAC,iBAAiB,CAAC,CAiCzC;AA2BD,wBAAgB,iCAAiC,IAAI,IAAI,CAExD"}

package/dist/server/handlers/monitoring.js

@@ -1,11 +1,11 @@
 import { existsSync, readdirSync, statSync } from 'node:fs';
-import { join } from 'node:path';
+import { join, resolve } from 'node:path';
 import { json } from '../response.js';
 import { MINDOS_IGNORED_DIRS } from '../runtime.js';
 export function handleMonitoringGet(services) {
     const snapshot = (services.metricsSnapshot ?? defaultMetricsSnapshot)();
     const memory = (services.memoryUsage ?? process.memoryUsage)();
-    const kbStats = walkStats(services.mindRoot);
+    const kbStats = getCachedStats(services.mindRoot, services.getTreeVersion);
     const mcpPort = services.mcpPort ?? (Number(process.env.MINDOS_MCP_PORT) || Number(process.env.MCP_PORT) || 8781);
     return json({
         system: {
@@ -45,6 +45,29 @@ function defaultMetricsSnapshot() {
         errors: 0,
     };
 }
+// Bounds the full-library walk: monitoring is polled, but the stats only
+// change when the tree does (version key) or, lacking a version source, at
+// most once per TTL window.
+const KB_STATS_TTL_MS = 30_000;
+const kbStatsCache = new Map();
+export function resetMonitoringStatsCacheForTests() {
+    kbStatsCache.clear();
+}
+function getCachedStats(root, getTreeVersion) {
+    const key = resolve(root);
+    const version = getTreeVersion ? getTreeVersion() : null;
+    const cached = kbStatsCache.get(key);
+    if (cached) {
+        const fresh = version !== null
+            ? cached.version === version
+            : Date.now() - cached.builtAt < KB_STATS_TTL_MS;
+        if (fresh)
+            return cached.value;
+    }
+    const value = walkStats(root);
+    kbStatsCache.set(key, { value, version, builtAt: Date.now() });
+    return value;
+}
 function walkStats(root) {
     let fileCount = 0;
     let totalSizeBytes = 0;

package/dist/server/handlers/monitoring.js.map

@@ -1 +1 @@
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package/dist/server/handlers/sync.d.ts

@@ -1,4 +1,5 @@
 import { type MindosServerResponse } from '../response.js';
+export declare function sanitizeGitEnv(base?: NodeJS.ProcessEnv): NodeJS.ProcessEnv;
 export type MindosSyncConfig = Record<string, any> & {
     mindRoot?: string;
     sync?: {

package/dist/server/handlers/sync.d.ts.map

@@ -1 +1 @@
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package/dist/server/handlers/sync.js

@@ -5,6 +5,29 @@ import { homedir, hostname } from 'node:os';
 import { dirname, join, resolve } from 'node:path';
 import { resolveExistingSafe } from '../../foundation/security/index.js';
 import { json } from '../response.js';
+// Git hooks (pre-push etc.) export GIT_DIR — and may export GIT_WORK_TREE,
+// GIT_INDEX_FILE, GIT_OBJECT_DIRECTORY, GIT_PREFIX, GIT_QUARANTINE_PATH —
+// pointing at the hook's own repository. Any git we spawn with that env and a
+// different cwd silently operates on the hook's repo instead of mindRoot
+// (real incident: a test run under pre-push committed onto the development
+// worktree and deleted the tree). These vars are never legitimate input to
+// MindOS sync; strip them from every spawned git's env. User-level git env
+// (GIT_SSH_COMMAND, GIT_TERMINAL_PROMPT, GIT_AUTHOR_*) stays. Keep the list
+// in sync with bin/lib/sync.js.
+const GIT_REPO_TARGETING_VARS = new Set([
+    'GIT_DIR',
+    'GIT_WORK_TREE',
+    'GIT_INDEX_FILE',
+    'GIT_OBJECT_DIRECTORY',
+    'GIT_ALTERNATE_OBJECT_DIRECTORIES',
+    'GIT_COMMON_DIR',
+    'GIT_NAMESPACE',
+    'GIT_PREFIX',
+    'GIT_QUARANTINE_PATH',
+]);
+export function sanitizeGitEnv(base = process.env) {
+    return Object.fromEntries(Object.entries(base).filter(([key]) => !GIT_REPO_TARGETING_VARS.has(key)));
+}
 const DEFAULT_MINDOS_DIR = join(homedir(), '.mindos');
 const DEFAULT_CONFIG_PATH = join(DEFAULT_MINDOS_DIR, 'config.json');
 const DEFAULT_SYNC_STATE_PATH = join(DEFAULT_MINDOS_DIR, 'sync-state.json');
@@ -453,6 +476,7 @@ function stopTrackingIgnoredFiles(mindRoot) {
             execFileSync('git', ['rm', '--cached', '--ignore-unmatch', '--', ...chunk], {
                 cwd: mindRoot,
                 stdio: 'pipe',
+                env: sanitizeGitEnv(),
                 timeout: 60_000,
             });
             stoppedTracking.push(...chunk);
@@ -482,6 +506,7 @@ function commitAndPushResolvedSync(mindRoot, file) {
             execFileSync('git', ['commit', '--only', '-m', 'auto-sync: resolved sync conflict', '--', ...pathspecs], {
                 cwd: mindRoot,
                 stdio: 'pipe',
+                env: sanitizeGitEnv(),
                 timeout: 60_000,
             });
         }
@@ -500,7 +525,7 @@ function commitAndPushResolvedSync(mindRoot, file) {
         execFileSync('git', ['push', '-u', 'origin', 'HEAD'], {
             cwd: mindRoot,
             stdio: 'pipe',
-            env: { ...process.env, GIT_TERMINAL_PROMPT: '0', ...getGitSshEnvIfNeeded(remote) },
+            env: { ...sanitizeGitEnv(), GIT_TERMINAL_PROMPT: '0', ...getGitSshEnvIfNeeded(remote) },
             timeout: 60_000,
         });
         return { uploaded: true };
@@ -552,6 +577,7 @@ function isGitPathTracked(mindRoot, pathspec) {
         execFileSync('git', ['ls-files', '--error-unmatch', '--', pathspec], {
             cwd: mindRoot,
             stdio: ['ignore', 'ignore', 'ignore'],
+            env: sanitizeGitEnv(),
             timeout: 5000,
         });
         return true;
@@ -566,6 +592,7 @@ function listTrackedGitFiles(mindRoot) {
             cwd: mindRoot,
             encoding: 'utf-8',
             stdio: ['ignore', 'pipe', 'pipe'],
+            env: sanitizeGitEnv(),
             timeout: 30_000,
         }));
     }
@@ -583,6 +610,7 @@ function listIgnoredFilesFromTrackedSet(mindRoot, trackedFiles) {
             input,
             encoding: 'utf-8',
             stdio: ['pipe', 'pipe', 'pipe'],
+            env: sanitizeGitEnv(),
             timeout: 30_000,
         }));
     }
@@ -605,10 +633,10 @@ function chunkArray(items, chunkSize) {
 }
 function ensureServerGitIdentity(mindRoot) {
     if (!readServerGitConfig(mindRoot, 'user.email')) {
-        execFileSync('git', ['config', 'user.email', 'mindos@local'], { cwd: mindRoot, stdio: 'pipe', timeout: 5000 });
+        execFileSync('git', ['config', 'user.email', 'mindos@local'], { cwd: mindRoot, stdio: 'pipe', env: sanitizeGitEnv(), timeout: 5000 });
     }
     if (!readServerGitConfig(mindRoot, 'user.name')) {
-        execFileSync('git', ['config', 'user.name', 'MindOS'], { cwd: mindRoot, stdio: 'pipe', timeout: 5000 });
+        execFileSync('git', ['config', 'user.name', 'MindOS'], { cwd: mindRoot, stdio: 'pipe', env: sanitizeGitEnv(), timeout: 5000 });
     }
 }
 function readServerGitConfig(mindRoot, key) {
@@ -972,6 +1000,7 @@ function runGit(cwd, args) {
         cwd,
         encoding: 'utf-8',
         stdio: ['ignore', 'pipe', 'ignore'],
+        env: sanitizeGitEnv(),
     }).trim();
 }
 export function redactGitRemote(remote) {
@@ -1026,7 +1055,9 @@ async function runCli(args, timeoutMs, services, envOverrides) {
         await services.runCli(args, timeoutMs, envOverrides);
         return;
     }
-    const env = { ...(services.env ?? process.env), ...(envOverrides ?? {}) };
+    // The child CLI spawns its own git against mindRoot — repo-targeting vars
+    // inherited from a git hook must not reach it either.
+    const env = { ...sanitizeGitEnv(services.env ?? process.env), ...(envOverrides ?? {}) };
     const nodeBin = services.nodeBin ?? env.MINDOS_NODE_BIN ?? process.execPath;
     const cliPath = services.cliPath ?? resolveMindosCliPath({
         env,