@galaxyproject/jupyterlite 0.0.17 → 0.0.19

package/package.json

@@ -1,17 +1,18 @@
 {
     "name": "@galaxyproject/jupyterlite",
-    "version": "0.0.17",
+    "version": "0.0.19",
     "type": "module",
     "files": [
         "static"
     ],
     "scripts": {
-        "build": "webpack && npm run build:jupyter && npm run build:gxy && npm run build:extension && npm run build:patch && npm run build:index",
+        "build": "webpack && npm run build:jupyter && npm run build:gxy && npm run build:extension && npm run build:patch && npm run build:index && npm run build:public",
         "build:extension": "node install-extension.js",
         "build:gxy": "cd gxy && python -m build --wheel",
         "build:index": "cpx src/index.js static/dist",
-        "build:jupyter": "jupyter lite build --output-dir static/dist/_output --config static/dist/_output/jupyter-lite.json",
+        "build:jupyter": "jupyter lite build --output-dir static/dist/_output",
         "build:patch": "node patch-config.js",
+        "build:public": "cp public/* static",
         "dev": "jupyter lite serve --output-dir static/dist/_output --config static/dist/_output/jupyter-lite.json",
         "prettier": "prettier --write 'package.json' '*.js' '*.ts' 'src/*.js' 'src/*.ts'",
         "test": "npx playwright test"

package/static/dist/_output/build/schemas/all_federated.json

@@ -1 +1 @@
-[]
+[{"id": "jupyter-secrets-manager:manager", "raw": "{}", "schema": {"title": "Secrets manager", "description": "The secrets manager settings", "type": "object", "properties": {"ShowSecretFields": {"type": "boolean", "title": "Show secret fields", "description": "Whether to show the secret fields in the UI or not", "default": false}}, "additionalProperties": false}, "settings": {}, "version": "0.4.1"}, {"id": "@jupyterlite/ai:settings-model", "raw": "{}", "schema": {"jupyter.lab.shortcuts": [], "title": "JupyterLite AI Settings", "description": "Configuration for JupyterLite AI extension providers, models, and behavior", "type": "object", "properties": {"useSecretsManager": {"type": "boolean", "title": "Use secrets manager", "description": "Whether to use or not the secrets manager. If not, secrets will be stored in plain text in settings", "default": true}, "providers": {"title": "AI Providers", "description": "List of configured AI providers", "type": "array", "items": {"type": "object", "properties": {"id": {"type": "string"}, "name": {"type": "string"}, "provider": {"type": "string", "description": "Provider identifier"}, "model": {"type": "string"}, "apiKey": {"type": "string"}, "baseURL": {"type": "string"}, "headers": {"type": "object", "additionalProperties": {"type": "string"}}, "parameters": {"type": "object", "description": "Provider-specific parameters", "properties": {"temperature": {"type": "number", "description": "Temperature (0.0 = deterministic, 2.0 = very creative)", "minimum": 0, "maximum": 2, "default": 0.7}, "maxTokens": {"type": "number", "description": "Maximum tokens for chat responses", "minimum": 1}, "maxTurns": {"type": "number", "description": "Maximum number of tool execution turns", "minimum": 1, "maximum": 100, "default": 25}, "supportsFillInMiddle": {"type": "boolean", "description": "Whether the model supports fill-in-middle completion"}, "useFilterText": {"type": "boolean", "description": "Whether to use filter text for completions"}}}, "customSettings": {"type": "object", "additionalProperties": true}}, "required": ["id", "name", "provider", "model"], "additionalProperties": true}, "default": []}, "defaultProvider": {"title": "Default Chat Provider", "description": "ID of the default provider to use for chat", "type": "string", "default": ""}, "activeCompleterProvider": {"title": "Active Completion Provider", "description": "ID of the provider to use for completions (if different from chat)", "type": "string"}, "useSameProviderForChatAndCompleter": {"title": "Use Same Provider", "description": "Use the same provider for both chat and completions", "type": "boolean", "default": true}, "mcpServers": {"title": "MCP Servers", "description": "Model Context Protocol servers configuration", "type": "array", "items": {"type": "object", "properties": {"id": {"type": "string"}, "name": {"type": "string"}, "url": {"type": "string"}, "enabled": {"type": "boolean"}}, "required": ["id", "name", "url", "enabled"], "additionalProperties": true}, "default": []}, "contextAwareness": {"title": "Context Awareness", "description": "Enable context-aware responses", "type": "boolean", "default": true}, "codeExecution": {"title": "Code Execution", "description": "Enable code execution capabilities", "type": "boolean", "default": false}, "toolsEnabled": {"title": "Tools Enabled", "description": "Allow AI to use tools like notebook operations and file management", "type": "boolean", "default": true}, "sendWithShiftEnter": {"title": "Send with Shift+Enter", "description": "Use Shift+Enter to send messages (Enter creates new line)", "type": "boolean", "default": false}, "showTokenUsage": {"title": "Show Token Usage", "description": "Display token usage information in the chat toolbar", "type": "boolean", "default": false}, "commandsRequiringApproval": {"title": "Commands Requiring Approval", "description": "List of commands that require user approval before AI can execute them", "type": "array", "items": {"type": "string"}, "default": ["notebook:restart-run-all", "notebook:run-cell", "notebook:run-cell-and-select-next", "notebook:run-cell-and-insert-below", "notebook:run-all-cells", "notebook:run-all-above", "notebook:run-all-below", "console:execute", "console:execute-forced", "fileeditor:run-code", "kernelmenu:run", "kernelmenu:restart-and-run-all", "runmenu:run-all"]}, "systemPrompt": {"title": "System Prompt", "description": "Instructions that define how the AI should behave and respond", "type": "string", "default": "You are Jupyternaut, an AI coding assistant built specifically for the JupyterLab environment.\n\n## Your Core Mission\nYou're designed to be a capable partner for data science, research, and development work in Jupyter notebooks. You can help with everything from quick code snippets to complex multi-notebook projects.\n\n## Your Capabilities\n**\ud83d\udcc1 File & Project Management:**\n- Create, read, edit, and organize Python files and notebooks\n- Manage project structure and navigate file systems\n- Help with version control and project organization\n\n**\ud83d\udcca Notebook Operations:**\n- Create new notebooks and manage existing ones\n- Add, edit, delete, and run cells (both code and markdown)\n- Help with notebook structure and organization\n- Retrieve and analyze cell outputs and execution results\n\n**\ud83e\udde0 Coding & Development:**\n- Write, debug, and optimize Python code\n- Explain complex algorithms and data structures\n- Help with data analysis, visualization, and machine learning\n- Support for scientific computing libraries (numpy, pandas, matplotlib, etc.)\n- Code reviews and best practices recommendations\n\n**\ud83d\udca1 Adaptive Assistance:**\n- Understand context from your current work environment\n- Provide suggestions tailored to your specific use case\n- Help with both quick fixes and long-term project planning\n\n## How I Work\nI can actively interact with your JupyterLab environment using specialized tools. When you ask me to perform actions, I can:\n- Execute operations directly in your notebooks\n- Create and modify files as needed\n- Run code and analyze results\n- Make systematic changes across multiple files\n\n## My Approach\n- **Context-aware**: I understand you're working in a data science/research environment\n- **Practical**: I focus on actionable solutions that work in your current setup\n- **Educational**: I explain my reasoning and teach best practices along the way\n- **Collaborative**: Think of me as a pair programming partner, not just a code generator\n\n## Communication Style & Agent Behavior\n- **Conversational**: I maintain a friendly, natural conversation flow throughout our interaction\n- **Progress Updates**: I write brief progress messages between tool uses that appear directly in our conversation\n- **No Filler**: I avoid empty acknowledgments like \"Sounds good!\" or \"Okay, I will...\" - I get straight to work\n- **Purposeful Communication**: I start with what I'm doing, use tools, then share what I found and what's next\n- **Active Narration**: I actively write progress updates like \"Looking at the current code structure...\" or \"Found the issue in the notebook...\" between tool calls\n- **Checkpoint Updates**: After several operations, I summarize what I've accomplished and what remains\n- **Natural Flow**: My explanations and progress reports appear as normal conversation text, not just in tool blocks\n\n## IMPORTANT: Always write progress messages between tools that explain what you're doing and what you found. These should be conversational updates that help the user follow along with your work.\n\n## Technical Communication\n- Code is formatted in proper markdown blocks with syntax highlighting\n- Mathematical notation uses LaTeX formatting: \\\\(equations\\\\) and \\\\[display math\\\\]\n- I provide context for my actions and explain my reasoning as I work\n- When creating or modifying multiple files, I give brief summaries of changes\n- I keep users informed of progress while staying focused on the task\n\n## Multi-Step Task Handling\nWhen users request complex tasks that require multiple steps (like \"create a notebook with example cells\"), I use tools in sequence to accomplish the complete task. For example:\n- First use create_notebook to create the notebook\n- Then use add_code_cell or add_markdown_cell to add cells\n- Use set_cell_content to add content to cells as needed\n- Use run_cell to execute code when appropriate\n\nAlways think through multi-step tasks and use tools to fully complete the user's request rather than stopping after just one action.\n\nReady to help you build something great! What are you working on?"}, "completionSystemPrompt": {"title": "Completion System Prompt", "description": "Instructions that define how the AI should generate code completions", "type": "string", "default": "You are an AI code completion assistant. Complete the given code fragment with appropriate code.\nRules:\n- Return only the completion text, no explanations or comments\n- Do not include code block markers (``` or similar)\n- Make completions contextually relevant to the surrounding code and notebook context\n- Follow the language-specific conventions and style guidelines for the detected programming language\n- Keep completions concise but functional\n- Do not repeat the existing code that comes before the cursor\n- Use variables, imports, functions, and other definitions from previous notebook cells when relevant"}, "showCellDiff": {"title": "Show Cell Diff", "description": "Show diff view when AI modifies cell content", "type": "boolean", "default": true}, "showFileDiff": {"title": "Show File Diff", "description": "Show diff view when AI modifies file content", "type": "boolean", "default": true}, "diffDisplayMode": {"title": "Diff Display Mode", "description": "How to display cell diffs (split or unified view)", "type": "string", "enum": ["split", "unified"], "default": "split"}}, "additionalProperties": false}, "settings": {}, "version": "0.9.1"}]

package/static/dist/_output/extensions/@jupyterlite/ai/install.json

@@ -0,0 +1,5 @@
+{
+  "packageManager": "python",
+  "packageName": "jupyterlite_ai",
+  "uninstallInstructions": "Use your Python package manager (pip, conda, etc.) to uninstall the package jupyterlite_ai"
+}

package/static/dist/_output/extensions/@jupyterlite/ai/package.json

@@ -0,0 +1,252 @@
+{
+  "name": "@jupyterlite/ai",
+  "version": "0.9.1",
+  "description": "AI code completions and chat for JupyterLite",
+  "keywords": [
+    "jupyter",
+    "jupyterlab",
+    "jupyterlab-extension"
+  ],
+  "homepage": "https://github.com/jupyterlite/ai",
+  "bugs": {
+    "url": "https://github.com/jupyterlite/ai/issues"
+  },
+  "license": "BSD-3-Clause",
+  "author": "JupyterLite Contributors",
+  "files": [
+    "lib/**/*.{d.ts,eot,gif,html,jpg,js,js.map,json,png,svg,woff2,ttf,md}",
+    "style/**/*.{css,js,eot,gif,html,jpg,json,png,svg,woff2,ttf}",
+    "src/**/*.{ts,tsx}",
+    "schema/*.json"
+  ],
+  "main": "lib/index.js",
+  "types": "lib/index.d.ts",
+  "style": "style/index.css",
+  "repository": {
+    "type": "git",
+    "url": "https://github.com/jupyterlite/ai.git"
+  },
+  "scripts": {
+    "build": "jlpm build:lib && jlpm build:labextension:dev",
+    "build:dev": "jlpm build:lib && jlpm build:labextension:dev",
+    "build:prod": "jlpm clean && jlpm build:lib:prod && jlpm build:labextension",
+    "build:labextension": "jupyter labextension build .",
+    "build:labextension:dev": "jupyter labextension build --development True .",
+    "build:lib": "tsc --sourceMap",
+    "build:lib:prod": "tsc",
+    "clean": "jlpm clean:lib",
+    "clean:lib": "rimraf lib tsconfig.tsbuildinfo",
+    "clean:lintcache": "rimraf .eslintcache .stylelintcache",
+    "clean:labextension": "rimraf jupyterlite_ai/labextension jupyterlite_ai/_version.py",
+    "clean:all": "jlpm clean:lib && jlpm clean:labextension && jlpm clean:lintcache",
+    "eslint": "jlpm eslint:check --fix",
+    "eslint:check": "eslint . --cache --ext .ts,.tsx",
+    "install:extension": "jlpm build",
+    "lint": "jlpm stylelint && jlpm prettier && jlpm eslint",
+    "lint:check": "jlpm stylelint:check && jlpm prettier:check && jlpm eslint:check",
+    "prettier": "jlpm prettier:base --write --list-different",
+    "prettier:base": "prettier \"**/*{.ts,.tsx,.js,.jsx,.css,.json,.md}\"",
+    "prettier:check": "jlpm prettier:base --check",
+    "stylelint": "jlpm stylelint:check --fix",
+    "stylelint:check": "stylelint --cache \"style/**/*.css\"",
+    "watch": "run-p watch:src watch:labextension",
+    "watch:src": "tsc -w --sourceMap",
+    "watch:labextension": "jupyter labextension watch ."
+  },
+  "dependencies": {
+    "@ai-sdk/anthropic": "^2.0.30",
+    "@ai-sdk/google": "^2.0.19",
+    "@ai-sdk/mistral": "^2.0.17",
+    "@ai-sdk/openai": "^2.0.44",
+    "@ai-sdk/openai-compatible": "^1.0.26",
+    "@jupyter/chat": "^0.18.2",
+    "@jupyterlab/application": "^4.0.0",
+    "@jupyterlab/apputils": "^4.5.6",
+    "@jupyterlab/cells": "^4.4.6",
+    "@jupyterlab/completer": "^4.0.0",
+    "@jupyterlab/coreutils": "^6.4.6",
+    "@jupyterlab/docmanager": "^4.4.6",
+    "@jupyterlab/docregistry": "^4.4.6",
+    "@jupyterlab/fileeditor": "^4.4.6",
+    "@jupyterlab/notebook": "^4.4.6",
+    "@jupyterlab/rendermime": "^4.4.6",
+    "@jupyterlab/services": "^7.4.6",
+    "@jupyterlab/settingregistry": "^4.0.0",
+    "@jupyterlab/statusbar": "^4.4.6",
+    "@jupyterlab/ui-components": "^4.4.6",
+    "@lumino/commands": "^2.3.2",
+    "@lumino/coreutils": "^2.2.1",
+    "@lumino/disposable": "^2.1.4",
+    "@lumino/messaging": "^2.0.3",
+    "@lumino/polling": "^2.1.4",
+    "@lumino/signaling": "^2.1.4",
+    "@lumino/widgets": "^2.7.1",
+    "@modelcontextprotocol/sdk": "^1.19.1",
+    "@mui/icons-material": "^7",
+    "@mui/material": "^7",
+    "@openai/agents": "^0.1.9",
+    "@openai/agents-extensions": "^0.1.5",
+    "ai": "^5.0.60",
+    "jupyter-secrets-manager": "^0.4.0",
+    "zod": "^3.25.76"
+  },
+  "devDependencies": {
+    "@jupyterlab/builder": "^4.0.0",
+    "@jupyterlab/testutils": "^4.0.0",
+    "@types/json-schema": "^7.0.11",
+    "@types/node": "^24.3.0",
+    "@types/react": "^18.0.26",
+    "@types/react-addons-linked-state-mixin": "^0.14.22",
+    "@typescript-eslint/eslint-plugin": "^6.1.0",
+    "@typescript-eslint/parser": "^6.1.0",
+    "css-loader": "^6.7.1",
+    "eslint": "^8.36.0",
+    "eslint-config-prettier": "^8.8.0",
+    "eslint-plugin-prettier": "^5.0.0",
+    "npm-run-all2": "^7.0.1",
+    "prettier": "^3.0.0",
+    "rimraf": "^5.0.1",
+    "source-map-loader": "^1.0.2",
+    "style-loader": "^3.3.1",
+    "stylelint": "^15.10.1",
+    "stylelint-config-recommended": "^13.0.0",
+    "stylelint-config-standard": "^34.0.0",
+    "stylelint-csstree-validator": "^3.0.0",
+    "stylelint-prettier": "^4.0.0",
+    "typescript": "~5.8.0",
+    "yjs": "^13.5.0"
+  },
+  "sideEffects": [
+    "style/*.css",
+    "style/index.js"
+  ],
+  "styleModule": "style/index.js",
+  "publishConfig": {
+    "access": "public"
+  },
+  "jupyterlab": {
+    "extension": true,
+    "outputDir": "jupyterlite_ai/labextension",
+    "schemaDir": "schema",
+    "_build": {
+      "load": "static/remoteEntry.2f103c13fd640ab93eb9.js",
+      "extension": "./extension",
+      "style": "./style"
+    }
+  },
+  "eslintIgnore": [
+    "node_modules",
+    "dist",
+    "coverage",
+    "**/*.d.ts",
+    "tests",
+    "**/__tests__",
+    "ui-tests",
+    ".venv",
+    "webpack.config.js"
+  ],
+  "eslintConfig": {
+    "extends": [
+      "eslint:recommended",
+      "plugin:@typescript-eslint/eslint-recommended",
+      "plugin:@typescript-eslint/recommended",
+      "plugin:prettier/recommended"
+    ],
+    "parser": "@typescript-eslint/parser",
+    "parserOptions": {
+      "project": "tsconfig.json",
+      "sourceType": "module"
+    },
+    "plugins": [
+      "@typescript-eslint"
+    ],
+    "rules": {
+      "@typescript-eslint/naming-convention": [
+        "error",
+        {
+          "selector": "interface",
+          "format": [
+            "PascalCase"
+          ],
+          "custom": {
+            "regex": "^I[A-Z]",
+            "match": true
+          }
+        }
+      ],
+      "@typescript-eslint/no-unused-vars": [
+        "warn",
+        {
+          "args": "none"
+        }
+      ],
+      "@typescript-eslint/no-explicit-any": "off",
+      "@typescript-eslint/no-namespace": "off",
+      "@typescript-eslint/no-use-before-define": "off",
+      "@typescript-eslint/quotes": [
+        "error",
+        "single",
+        {
+          "avoidEscape": true,
+          "allowTemplateLiterals": false
+        }
+      ],
+      "curly": [
+        "error",
+        "all"
+      ],
+      "eqeqeq": "error",
+      "prefer-arrow-callback": "error",
+      "no-restricted-imports": [
+        "error",
+        {
+          "paths": [
+            {
+              "name": "@mui/icons-material",
+              "message": "Please import icons using path imports, e.g. `import AddIcon from '@mui/icons-material/Add'`"
+            }
+          ],
+          "patterns": [
+            {
+              "group": [
+                "@mui/*/*/*"
+              ],
+              "message": "3rd level imports in mui are considered private"
+            }
+          ]
+        }
+      ]
+    }
+  },
+  "prettier": {
+    "singleQuote": true,
+    "trailingComma": "none",
+    "arrowParens": "avoid",
+    "endOfLine": "auto",
+    "overrides": [
+      {
+        "files": "package.json",
+        "options": {
+          "tabWidth": 4
+        }
+      }
+    ]
+  },
+  "stylelint": {
+    "extends": [
+      "stylelint-config-recommended",
+      "stylelint-config-standard",
+      "stylelint-prettier/recommended"
+    ],
+    "plugins": [
+      "stylelint-csstree-validator"
+    ],
+    "rules": {
+      "csstree/validator": true,
+      "property-no-vendor-prefix": null,
+      "selector-class-pattern": "^([a-z][A-z\\d]*)(-[A-z\\d]+)*$|^Mui[A-Z]",
+      "selector-no-vendor-prefix": null,
+      "value-no-vendor-prefix": null
+    }
+  }
+}

package/static/dist/_output/extensions/@jupyterlite/ai/schemas/@jupyterlite/ai/settings-model.json

@@ -0,0 +1,194 @@
+{
+  "jupyter.lab.shortcuts": [],
+  "title": "JupyterLite AI Settings",
+  "description": "Configuration for JupyterLite AI extension providers, models, and behavior",
+  "type": "object",
+  "properties": {
+    "useSecretsManager": {
+      "type": "boolean",
+      "title": "Use secrets manager",
+      "description": "Whether to use or not the secrets manager. If not, secrets will be stored in plain text in settings",
+      "default": true
+    },
+    "providers": {
+      "title": "AI Providers",
+      "description": "List of configured AI providers",
+      "type": "array",
+      "items": {
+        "type": "object",
+        "properties": {
+          "id": { "type": "string" },
+          "name": { "type": "string" },
+          "provider": {
+            "type": "string",
+            "description": "Provider identifier"
+          },
+          "model": { "type": "string" },
+          "apiKey": { "type": "string" },
+          "baseURL": { "type": "string" },
+          "headers": {
+            "type": "object",
+            "additionalProperties": { "type": "string" }
+          },
+          "parameters": {
+            "type": "object",
+            "description": "Provider-specific parameters",
+            "properties": {
+              "temperature": {
+                "type": "number",
+                "description": "Temperature (0.0 = deterministic, 2.0 = very creative)",
+                "minimum": 0,
+                "maximum": 2,
+                "default": 0.7
+              },
+              "maxTokens": {
+                "type": "number",
+                "description": "Maximum tokens for chat responses",
+                "minimum": 1
+              },
+              "maxTurns": {
+                "type": "number",
+                "description": "Maximum number of tool execution turns",
+                "minimum": 1,
+                "maximum": 100,
+                "default": 25
+              },
+              "supportsFillInMiddle": {
+                "type": "boolean",
+                "description": "Whether the model supports fill-in-middle completion"
+              },
+              "useFilterText": {
+                "type": "boolean",
+                "description": "Whether to use filter text for completions"
+              }
+            }
+          },
+          "customSettings": {
+            "type": "object",
+            "additionalProperties": true
+          }
+        },
+        "required": ["id", "name", "provider", "model"],
+        "additionalProperties": true
+      },
+      "default": []
+    },
+    "defaultProvider": {
+      "title": "Default Chat Provider",
+      "description": "ID of the default provider to use for chat",
+      "type": "string",
+      "default": ""
+    },
+    "activeCompleterProvider": {
+      "title": "Active Completion Provider",
+      "description": "ID of the provider to use for completions (if different from chat)",
+      "type": "string"
+    },
+    "useSameProviderForChatAndCompleter": {
+      "title": "Use Same Provider",
+      "description": "Use the same provider for both chat and completions",
+      "type": "boolean",
+      "default": true
+    },
+    "mcpServers": {
+      "title": "MCP Servers",
+      "description": "Model Context Protocol servers configuration",
+      "type": "array",
+      "items": {
+        "type": "object",
+        "properties": {
+          "id": { "type": "string" },
+          "name": { "type": "string" },
+          "url": { "type": "string" },
+          "enabled": { "type": "boolean" }
+        },
+        "required": ["id", "name", "url", "enabled"],
+        "additionalProperties": true
+      },
+      "default": []
+    },
+    "contextAwareness": {
+      "title": "Context Awareness",
+      "description": "Enable context-aware responses",
+      "type": "boolean",
+      "default": true
+    },
+    "codeExecution": {
+      "title": "Code Execution",
+      "description": "Enable code execution capabilities",
+      "type": "boolean",
+      "default": false
+    },
+    "toolsEnabled": {
+      "title": "Tools Enabled",
+      "description": "Allow AI to use tools like notebook operations and file management",
+      "type": "boolean",
+      "default": true
+    },
+    "sendWithShiftEnter": {
+      "title": "Send with Shift+Enter",
+      "description": "Use Shift+Enter to send messages (Enter creates new line)",
+      "type": "boolean",
+      "default": false
+    },
+    "showTokenUsage": {
+      "title": "Show Token Usage",
+      "description": "Display token usage information in the chat toolbar",
+      "type": "boolean",
+      "default": false
+    },
+    "commandsRequiringApproval": {
+      "title": "Commands Requiring Approval",
+      "description": "List of commands that require user approval before AI can execute them",
+      "type": "array",
+      "items": { "type": "string" },
+      "default": [
+        "notebook:restart-run-all",
+        "notebook:run-cell",
+        "notebook:run-cell-and-select-next",
+        "notebook:run-cell-and-insert-below",
+        "notebook:run-all-cells",
+        "notebook:run-all-above",
+        "notebook:run-all-below",
+        "console:execute",
+        "console:execute-forced",
+        "fileeditor:run-code",
+        "kernelmenu:run",
+        "kernelmenu:restart-and-run-all",
+        "runmenu:run-all"
+      ]
+    },
+    "systemPrompt": {
+      "title": "System Prompt",
+      "description": "Instructions that define how the AI should behave and respond",
+      "type": "string",
+      "default": "You are Jupyternaut, an AI coding assistant built specifically for the JupyterLab environment.\n\n## Your Core Mission\nYou're designed to be a capable partner for data science, research, and development work in Jupyter notebooks. You can help with everything from quick code snippets to complex multi-notebook projects.\n\n## Your Capabilities\n**📁 File & Project Management:**\n- Create, read, edit, and organize Python files and notebooks\n- Manage project structure and navigate file systems\n- Help with version control and project organization\n\n**📊 Notebook Operations:**\n- Create new notebooks and manage existing ones\n- Add, edit, delete, and run cells (both code and markdown)\n- Help with notebook structure and organization\n- Retrieve and analyze cell outputs and execution results\n\n**🧠 Coding & Development:**\n- Write, debug, and optimize Python code\n- Explain complex algorithms and data structures\n- Help with data analysis, visualization, and machine learning\n- Support for scientific computing libraries (numpy, pandas, matplotlib, etc.)\n- Code reviews and best practices recommendations\n\n**💡 Adaptive Assistance:**\n- Understand context from your current work environment\n- Provide suggestions tailored to your specific use case\n- Help with both quick fixes and long-term project planning\n\n## How I Work\nI can actively interact with your JupyterLab environment using specialized tools. When you ask me to perform actions, I can:\n- Execute operations directly in your notebooks\n- Create and modify files as needed\n- Run code and analyze results\n- Make systematic changes across multiple files\n\n## My Approach\n- **Context-aware**: I understand you're working in a data science/research environment\n- **Practical**: I focus on actionable solutions that work in your current setup\n- **Educational**: I explain my reasoning and teach best practices along the way\n- **Collaborative**: Think of me as a pair programming partner, not just a code generator\n\n## Communication Style & Agent Behavior\n- **Conversational**: I maintain a friendly, natural conversation flow throughout our interaction\n- **Progress Updates**: I write brief progress messages between tool uses that appear directly in our conversation\n- **No Filler**: I avoid empty acknowledgments like \"Sounds good!\" or \"Okay, I will...\" - I get straight to work\n- **Purposeful Communication**: I start with what I'm doing, use tools, then share what I found and what's next\n- **Active Narration**: I actively write progress updates like \"Looking at the current code structure...\" or \"Found the issue in the notebook...\" between tool calls\n- **Checkpoint Updates**: After several operations, I summarize what I've accomplished and what remains\n- **Natural Flow**: My explanations and progress reports appear as normal conversation text, not just in tool blocks\n\n## IMPORTANT: Always write progress messages between tools that explain what you're doing and what you found. These should be conversational updates that help the user follow along with your work.\n\n## Technical Communication\n- Code is formatted in proper markdown blocks with syntax highlighting\n- Mathematical notation uses LaTeX formatting: \\\\(equations\\\\) and \\\\[display math\\\\]\n- I provide context for my actions and explain my reasoning as I work\n- When creating or modifying multiple files, I give brief summaries of changes\n- I keep users informed of progress while staying focused on the task\n\n## Multi-Step Task Handling\nWhen users request complex tasks that require multiple steps (like \"create a notebook with example cells\"), I use tools in sequence to accomplish the complete task. For example:\n- First use create_notebook to create the notebook\n- Then use add_code_cell or add_markdown_cell to add cells\n- Use set_cell_content to add content to cells as needed\n- Use run_cell to execute code when appropriate\n\nAlways think through multi-step tasks and use tools to fully complete the user's request rather than stopping after just one action.\n\nReady to help you build something great! What are you working on?"
+    },
+    "completionSystemPrompt": {
+      "title": "Completion System Prompt",
+      "description": "Instructions that define how the AI should generate code completions",
+      "type": "string",
+      "default": "You are an AI code completion assistant. Complete the given code fragment with appropriate code.\nRules:\n- Return only the completion text, no explanations or comments\n- Do not include code block markers (``` or similar)\n- Make completions contextually relevant to the surrounding code and notebook context\n- Follow the language-specific conventions and style guidelines for the detected programming language\n- Keep completions concise but functional\n- Do not repeat the existing code that comes before the cursor\n- Use variables, imports, functions, and other definitions from previous notebook cells when relevant"
+    },
+    "showCellDiff": {
+      "title": "Show Cell Diff",
+      "description": "Show diff view when AI modifies cell content",
+      "type": "boolean",
+      "default": true
+    },
+    "showFileDiff": {
+      "title": "Show File Diff",
+      "description": "Show diff view when AI modifies file content",
+      "type": "boolean",
+      "default": true
+    },
+    "diffDisplayMode": {
+      "title": "Diff Display Mode",
+      "description": "How to display cell diffs (split or unified view)",
+      "type": "string",
+      "enum": ["split", "unified"],
+      "default": "split"
+    }
+  },
+  "additionalProperties": false
+}

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