@galaxy-tool-util/gxwf-web 1.0.0 → 1.2.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/app.js +3 -3
- package/dist/app.js.map +1 -1
- package/dist/generated/api-types.d.ts +344 -0
- package/dist/generated/api-types.d.ts.map +1 -1
- package/dist/router.d.ts +2 -1
- package/dist/router.d.ts.map +1 -1
- package/dist/router.js +77 -1
- package/dist/router.js.map +1 -1
- package/dist/tool-cache.d.ts +63 -0
- package/dist/tool-cache.d.ts.map +1 -0
- package/dist/tool-cache.js +118 -0
- package/dist/tool-cache.js.map +1 -0
- package/dist/workflows.d.ts +13 -0
- package/dist/workflows.d.ts.map +1 -1
- package/dist/workflows.js +19 -1
- package/dist/workflows.js.map +1 -1
- package/openapi.json +296 -0
- package/package.json +5 -4
- package/public/assets/FileView-BjO71gOh.css +1 -0
- package/public/assets/FileView-CsOpVj29.js +1389 -0
- package/public/assets/ToolCacheView-E1LZS0xv.css +1 -0
- package/public/assets/ToolCacheView-bRFTq8lT.js +120 -0
- package/public/assets/WorkflowView-CRSqinCX.js +198 -0
- package/public/assets/WorkflowView-DIO7pNhW.css +1 -0
- package/public/assets/_baseFor-CPf-8vV8.js +1 -0
- package/public/assets/arc-Cwod2qo3.js +1 -0
- package/public/assets/architecture-YZFGNWBL-DQVw0vyH.js +1 -0
- package/public/assets/architectureDiagram-Q4EWVU46-jinf4bpr.js +36 -0
- package/public/assets/array-DYRGGQae.js +1 -0
- package/public/assets/blockDiagram-DXYQGD6D-DyH9QtyX.js +132 -0
- package/public/assets/browser-DVDf39JZ.js +107 -0
- package/public/assets/c4Diagram-AHTNJAMY-eIaaNFF5.js +10 -0
- package/public/assets/channel-B9wkeALp.js +1 -0
- package/public/assets/chunk-2KRD3SAO-CbETq-ui.js +1 -0
- package/public/assets/chunk-336JU56O-K6Z1vrz8.js +2 -0
- package/public/assets/chunk-426QAEUC-B7stkjff.js +1 -0
- package/public/assets/chunk-4BX2VUAB-DAYhiPDD.js +1 -0
- package/public/assets/chunk-4TB4RGXK-DzYiMt8K.js +206 -0
- package/public/assets/chunk-55IACEB6-Bs8d_KN7.js +1 -0
- package/public/assets/chunk-5FUZZQ4R-BXjMW0vl.js +62 -0
- package/public/assets/chunk-5PVQY5BW-DpYMb9bR.js +2 -0
- package/public/assets/chunk-67CJDMHE-CYVqyDPX.js +1 -0
- package/public/assets/chunk-7N4EOEYR-DSMoHHQB.js +1 -0
- package/public/assets/chunk-AA7GKIK3-CVBwnsUJ.js +1 -0
- package/public/assets/chunk-BSJP7CBP-DG8ixKk7.js +1 -0
- package/public/assets/chunk-Bj-mKKzh.js +1 -0
- package/public/assets/chunk-CIAEETIT-ChsKIYeM.js +1 -0
- package/public/assets/chunk-EDXVE4YY-B13SDZ3c.js +1 -0
- package/public/assets/chunk-ENJZ2VHE-DrVCiAoi.js +10 -0
- package/public/assets/chunk-FMBD7UC4-Cwhu6s_B.js +15 -0
- package/public/assets/chunk-FOC6F5B3-CXZWmV4p.js +1 -0
- package/public/assets/chunk-ICPOFSXX-DwxYmUOT.js +121 -0
- package/public/assets/chunk-K5T4RW27-DjpJ2Af8.js +94 -0
- package/public/assets/chunk-KGLVRYIC-l_Galra0.js +1 -0
- package/public/assets/chunk-LIHQZDEY-SFFOoGZ_.js +1 -0
- package/public/assets/chunk-ORNJ4GCN-CJCUlfd1.js +1 -0
- package/public/assets/chunk-OYMX7WX6-CmfQJYSW.js +231 -0
- package/public/assets/chunk-QZHKN3VN-CXmXAQWB.js +1 -0
- package/public/assets/chunk-U2HBQHQK-oBXc92ns.js +70 -0
- package/public/assets/chunk-X2U36JSP-CWkpvLVO.js +1 -0
- package/public/assets/chunk-XPW4576I-DLAs5a7i.js +32 -0
- package/public/assets/chunk-YZCP3GAM-0MxWrEbo.js +1 -0
- package/public/assets/chunk-ZZ45TVLE-BqOxN5U6.js +1 -0
- package/public/assets/classDiagram-6PBFFD2Q-A_f6K02B.js +1 -0
- package/public/assets/classDiagram-v2-HSJHXN6E-DrcrbPO1.js +1 -0
- package/public/assets/clone-grQBEjNN.js +1 -0
- package/public/assets/cose-bilkent-S5V4N54A-D4wikFr1.js +1 -0
- package/public/assets/cytoscape-dagre-CO2HNyOd.js +1 -0
- package/public/assets/cytoscape-popper-D30IDL9Y.js +1 -0
- package/public/assets/cytoscape.esm-Cj_wycbY.js +321 -0
- package/public/assets/dagre-BxiFovGJ.js +1 -0
- package/public/assets/dagre-KV5264BT-1zSgR5z0.js +4 -0
- package/public/assets/defaultLocale-Du1XY3Dp.js +1 -0
- package/public/assets/diagram-5BDNPKRD-DpWxP0aE.js +10 -0
- package/public/assets/diagram-G4DWMVQ6-BhUB45RQ.js +24 -0
- package/public/assets/diagram-MMDJMWI5-D3tAT1JA.js +43 -0
- package/public/assets/diagram-TYMM5635-Y66BFGuY.js +24 -0
- package/public/assets/dist-J4JWBlIj.js +1 -0
- package/public/assets/erDiagram-SMLLAGMA-olVV48Hp.js +85 -0
- package/public/assets/flatten-CJeJD637.js +1 -0
- package/public/assets/flowDiagram-DWJPFMVM-QayyKS33.js +162 -0
- package/public/assets/ganttDiagram-T4ZO3ILL-DmE3LL1i.js +292 -0
- package/public/assets/gitGraph-7Q5UKJZL-CFN6X8um.js +1 -0
- package/public/assets/gitGraphDiagram-UUTBAWPF-KhK3dvbQ.js +106 -0
- package/public/assets/graphlib-Bi-ymRsv.js +1 -0
- package/public/assets/{iconv-lite-umd-B_p9IM1r.js → iconv-lite-umd-D-w9FMFt.js} +1 -1
- package/public/assets/index-4Ycp0GGC.js +1824 -0
- package/public/assets/index-DwHu09Uc.css +1 -0
- package/public/assets/info-OMHHGYJF-DTuIGRm4.js +1 -0
- package/public/assets/infoDiagram-42DDH7IO-BmhfgIe-.js +2 -0
- package/public/assets/init-B5BXBRcm.js +1 -0
- package/public/assets/isEmpty-D5KDGotR.js +1 -0
- package/public/assets/ishikawaDiagram-UXIWVN3A-D-BfQrbQ.js +70 -0
- package/public/assets/journeyDiagram-VCZTEJTY-CT0HRztw.js +139 -0
- package/public/assets/{jschardet-CGqe33Rd.js → jschardet-tASGyPDl.js} +1 -1
- package/public/assets/kanban-definition-6JOO6SKY-BZnydE-0.js +89 -0
- package/public/assets/katex-B-EfS3nw.js +257 -0
- package/public/assets/lib-qyXcPJAL.js +1 -0
- package/public/assets/line-qKqldnLj.js +1 -0
- package/public/assets/linear-BiJptqH_.js +1 -0
- package/public/assets/mermaid-parser.core-C09j9HB7.js +4 -0
- package/public/assets/mermaid.core-BDhviqRd.js +11 -0
- package/public/assets/mindmap-definition-QFDTVHPH-Dt3WMSPV.js +96 -0
- package/public/assets/ordinal-BDi6f4xk.js +1 -0
- package/public/assets/packet-4T2RLAQJ-tlarMvy0.js +1 -0
- package/public/assets/path-CNO468J-.js +1 -0
- package/public/assets/pie-ZZUOXDRM-BQlXSSpD.js +1 -0
- package/public/assets/pieDiagram-DEJITSTG-Yqe8uCAr.js +30 -0
- package/public/assets/purify.es-PlwmxSh4.js +2 -0
- package/public/assets/quadrantDiagram-34T5L4WZ-D6S_SKNN.js +7 -0
- package/public/assets/radar-PYXPWWZC-CazFChG-.js +1 -0
- package/public/assets/reduce-CulceXYF.js +1 -0
- package/public/assets/requirementDiagram-MS252O5E-jfbAS50v.js +84 -0
- package/public/assets/rough.esm-Ci7Kjt46.js +1 -0
- package/public/assets/sankeyDiagram-XADWPNL6-BAUJwgc9.js +10 -0
- package/public/assets/sequenceDiagram-FGHM5R23-D7HLbuOf.js +157 -0
- package/public/assets/src-Com_8MQM.js +1 -0
- package/public/assets/stateDiagram-FHFEXIEX-BX7o31BE.js +1 -0
- package/public/assets/stateDiagram-v2-QKLJ7IA2-Co5H7aCg.js +1 -0
- package/public/assets/timeline-definition-GMOUNBTQ-CZLMeEm3.js +120 -0
- package/public/assets/tippy-Lcq2UOUK.css +1 -0
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- package/public/assets/treeView-SZITEDCU-DF1ehvU3.js +1 -0
- package/public/assets/treemap-W4RFUUIX-BPejKas6.js +1 -0
- package/public/assets/useApi-CXAk43j3.js +1511 -0
- package/public/assets/useOperation-6c4UXxWc.js +74 -0
- package/public/assets/useToolInfoService-BoFJqmDR.js +276 -0
- package/public/assets/vennDiagram-DHZGUBPP-CU_yL8Jq.js +34 -0
- package/public/assets/wardley-RL74JXVD-BMMwMdqw.js +1 -0
- package/public/assets/wardleyDiagram-NUSXRM2D-BJ2G793c.js +20 -0
- package/public/assets/xychartDiagram-5P7HB3ND-CtCVgkGt.js +7 -0
- package/public/index.html +4 -2
- package/public/assets/index-BuA7-9w3.js +0 -4768
- package/public/assets/index-CWluWhm0.css +0 -1
package/openapi.json
CHANGED
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@@ -1016,6 +1016,170 @@
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}
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}
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}
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},
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"/api/tool-cache": {
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"get": {
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"tags": ["tool-cache"],
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"summary": "List cached tools and aggregate stats",
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"operationId": "list_tool_cache_api_tool_cache_get",
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"parameters": [
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{
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"name": "decode",
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"in": "query",
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"required": false,
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"description": "Set to '1' to probe each entry for ParsedTool decode-ability. Adds N file reads.",
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"schema": { "type": "string", "enum": ["1"], "title": "Decode" }
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}
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],
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"responses": {
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"200": {
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"description": "Successful Response",
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"content": {
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"application/json": {
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"schema": { "$ref": "#/components/schemas/ToolCacheListResponse" }
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}
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}
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}
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},
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"delete": {
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"tags": ["tool-cache"],
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"summary": "Clear all entries (or by tool-id prefix)",
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"operationId": "clear_tool_cache_api_tool_cache_delete",
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"parameters": [
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{
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"name": "prefix",
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"in": "query",
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"required": false,
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"schema": { "type": "string", "title": "Prefix" }
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}
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],
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"responses": {
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"200": {
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"description": "Successful Response",
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"content": {
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"application/json": {
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"schema": { "$ref": "#/components/schemas/ToolCacheClearResponse" }
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}
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}
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},
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"/api/tool-cache/stats": {
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"get": {
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"tags": ["tool-cache"],
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"summary": "Aggregate cache stats",
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"operationId": "get_tool_cache_stats_api_tool_cache_stats_get",
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"responses": {
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"200": {
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"description": "Successful Response",
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"content": {
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"application/json": {
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"schema": { "$ref": "#/components/schemas/CacheStats" }
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}
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}
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}
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}
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},
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"/api/tool-cache/refetch": {
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"post": {
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"tags": ["tool-cache"],
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"summary": "Re-fetch a tool from its source (replacing the cached entry)",
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"operationId": "refetch_tool_cache_api_tool_cache_refetch_post",
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"requestBody": {
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"required": true,
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"content": {
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"application/json": {
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"schema": { "$ref": "#/components/schemas/ToolCacheRefetchRequest" }
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},
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"description": "Successful Response",
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"content": {
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"application/json": {
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"schema": { "$ref": "#/components/schemas/ToolCacheRefetchResponse" }
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},
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"/api/tool-cache/add": {
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"post": {
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"tags": ["tool-cache"],
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"summary": "Populate the cache for a known tool id (diagnostic)",
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"operationId": "add_tool_cache_api_tool_cache_add_post",
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"requestBody": {
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"required": true,
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"content": {
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"application/json": {
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"schema": { "$ref": "#/components/schemas/ToolCacheAddRequest" }
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}
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}
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},
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"responses": {
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"200": {
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"description": "Successful Response",
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"content": {
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"application/json": {
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"schema": { "$ref": "#/components/schemas/ToolCacheAddResponse" }
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}
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}
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},
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"/api/tool-cache/{cacheKey}": {
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"get": {
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"tags": ["tool-cache"],
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"summary": "Get the raw cached payload",
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"operationId": "read_tool_cache_api_tool_cache_key_get",
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"parameters": [
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"name": "cacheKey",
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"in": "path",
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"schema": { "type": "string", "title": "Cache Key" }
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"content": {
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"schema": { "$ref": "#/components/schemas/ToolCacheRawResponse" }
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}
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"delete": {
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"tags": ["tool-cache"],
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"summary": "Delete a single cache entry",
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"operationId": "delete_tool_cache_api_tool_cache_key_delete",
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"schema": { "$ref": "#/components/schemas/ToolCacheDeleteResponse" }
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}
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"default": 0
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"lint_error_messages": {
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"title": "Lint Error Messages",
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"default": []
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},
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"lint_warning_messages": {
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"type": "array",
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|
2196
|
+
"title": "Lint Warning Messages",
|
|
2197
|
+
"default": []
|
|
2198
|
+
},
|
|
2019
2199
|
"results": {
|
|
2020
2200
|
"items": {
|
|
2021
2201
|
"$ref": "#/components/schemas/ValidationStepResult"
|
|
@@ -2569,6 +2749,122 @@
|
|
|
2569
2749
|
],
|
|
2570
2750
|
"title": "WorkflowIndex",
|
|
2571
2751
|
"description": "Index of all workflows in the target directory."
|
|
2752
|
+
},
|
|
2753
|
+
"CachedToolEntry": {
|
|
2754
|
+
"type": "object",
|
|
2755
|
+
"title": "CachedToolEntry",
|
|
2756
|
+
"required": [
|
|
2757
|
+
"cacheKey",
|
|
2758
|
+
"toolId",
|
|
2759
|
+
"toolVersion",
|
|
2760
|
+
"source",
|
|
2761
|
+
"sourceUrl",
|
|
2762
|
+
"cachedAt",
|
|
2763
|
+
"decodable",
|
|
2764
|
+
"refetchable"
|
|
2765
|
+
],
|
|
2766
|
+
"properties": {
|
|
2767
|
+
"cacheKey": { "type": "string", "title": "Cache Key" },
|
|
2768
|
+
"toolId": { "type": "string", "title": "Tool Id" },
|
|
2769
|
+
"toolVersion": { "type": "string", "title": "Tool Version" },
|
|
2770
|
+
"source": { "type": "string", "title": "Source" },
|
|
2771
|
+
"sourceUrl": { "type": "string", "title": "Source Url" },
|
|
2772
|
+
"cachedAt": { "type": "string", "title": "Cached At" },
|
|
2773
|
+
"sizeBytes": { "type": "integer", "title": "Size Bytes" },
|
|
2774
|
+
"decodable": { "type": "boolean", "title": "Decodable" },
|
|
2775
|
+
"toolshedUrl": { "type": "string", "title": "Toolshed Url" },
|
|
2776
|
+
"refetchable": { "type": "boolean", "title": "Refetchable" }
|
|
2777
|
+
}
|
|
2778
|
+
},
|
|
2779
|
+
"CacheStats": {
|
|
2780
|
+
"type": "object",
|
|
2781
|
+
"title": "CacheStats",
|
|
2782
|
+
"required": ["count", "bySource"],
|
|
2783
|
+
"properties": {
|
|
2784
|
+
"count": { "type": "integer", "title": "Count" },
|
|
2785
|
+
"totalBytes": { "type": "integer", "title": "Total Bytes" },
|
|
2786
|
+
"bySource": {
|
|
2787
|
+
"type": "object",
|
|
2788
|
+
"additionalProperties": { "type": "integer" },
|
|
2789
|
+
"title": "By Source"
|
|
2790
|
+
},
|
|
2791
|
+
"oldest": { "type": "string", "title": "Oldest" },
|
|
2792
|
+
"newest": { "type": "string", "title": "Newest" }
|
|
2793
|
+
}
|
|
2794
|
+
},
|
|
2795
|
+
"ToolCacheListResponse": {
|
|
2796
|
+
"type": "object",
|
|
2797
|
+
"title": "ToolCacheListResponse",
|
|
2798
|
+
"required": ["entries", "stats"],
|
|
2799
|
+
"properties": {
|
|
2800
|
+
"entries": {
|
|
2801
|
+
"type": "array",
|
|
2802
|
+
"items": { "$ref": "#/components/schemas/CachedToolEntry" }
|
|
2803
|
+
},
|
|
2804
|
+
"stats": { "$ref": "#/components/schemas/CacheStats" }
|
|
2805
|
+
}
|
|
2806
|
+
},
|
|
2807
|
+
"ToolCacheRawResponse": {
|
|
2808
|
+
"type": "object",
|
|
2809
|
+
"title": "ToolCacheRawResponse",
|
|
2810
|
+
"required": ["contents", "decodable"],
|
|
2811
|
+
"properties": {
|
|
2812
|
+
"contents": { "title": "Contents" },
|
|
2813
|
+
"decodable": { "type": "boolean", "title": "Decodable" }
|
|
2814
|
+
}
|
|
2815
|
+
},
|
|
2816
|
+
"ToolCacheDeleteResponse": {
|
|
2817
|
+
"type": "object",
|
|
2818
|
+
"title": "ToolCacheDeleteResponse",
|
|
2819
|
+
"required": ["removed"],
|
|
2820
|
+
"properties": {
|
|
2821
|
+
"removed": { "type": "boolean", "title": "Removed" }
|
|
2822
|
+
}
|
|
2823
|
+
},
|
|
2824
|
+
"ToolCacheClearResponse": {
|
|
2825
|
+
"type": "object",
|
|
2826
|
+
"title": "ToolCacheClearResponse",
|
|
2827
|
+
"required": ["removed"],
|
|
2828
|
+
"properties": {
|
|
2829
|
+
"removed": { "type": "integer", "title": "Removed" }
|
|
2830
|
+
}
|
|
2831
|
+
},
|
|
2832
|
+
"ToolCacheRefetchRequest": {
|
|
2833
|
+
"type": "object",
|
|
2834
|
+
"title": "ToolCacheRefetchRequest",
|
|
2835
|
+
"required": ["toolId"],
|
|
2836
|
+
"properties": {
|
|
2837
|
+
"toolId": { "type": "string", "title": "Tool Id" },
|
|
2838
|
+
"toolVersion": { "type": "string", "title": "Tool Version" }
|
|
2839
|
+
}
|
|
2840
|
+
},
|
|
2841
|
+
"ToolCacheRefetchResponse": {
|
|
2842
|
+
"type": "object",
|
|
2843
|
+
"title": "ToolCacheRefetchResponse",
|
|
2844
|
+
"required": ["cacheKey", "fetched", "alreadyCached"],
|
|
2845
|
+
"properties": {
|
|
2846
|
+
"cacheKey": { "type": "string", "title": "Cache Key" },
|
|
2847
|
+
"fetched": { "type": "boolean", "title": "Fetched" },
|
|
2848
|
+
"alreadyCached": { "type": "boolean", "title": "Already Cached" }
|
|
2849
|
+
}
|
|
2850
|
+
},
|
|
2851
|
+
"ToolCacheAddRequest": {
|
|
2852
|
+
"type": "object",
|
|
2853
|
+
"title": "ToolCacheAddRequest",
|
|
2854
|
+
"required": ["toolId"],
|
|
2855
|
+
"properties": {
|
|
2856
|
+
"toolId": { "type": "string", "title": "Tool Id" },
|
|
2857
|
+
"toolVersion": { "type": "string", "title": "Tool Version" }
|
|
2858
|
+
}
|
|
2859
|
+
},
|
|
2860
|
+
"ToolCacheAddResponse": {
|
|
2861
|
+
"type": "object",
|
|
2862
|
+
"title": "ToolCacheAddResponse",
|
|
2863
|
+
"required": ["cacheKey", "alreadyCached"],
|
|
2864
|
+
"properties": {
|
|
2865
|
+
"cacheKey": { "type": "string", "title": "Cache Key" },
|
|
2866
|
+
"alreadyCached": { "type": "boolean", "title": "Already Cached" }
|
|
2867
|
+
}
|
|
2572
2868
|
}
|
|
2573
2869
|
}
|
|
2574
2870
|
}
|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@galaxy-tool-util/gxwf-web",
|
|
3
|
-
"version": "1.
|
|
3
|
+
"version": "1.2.0",
|
|
4
4
|
"description": "Galaxy workflow development HTTP server — validate, lint, clean, convert workflows",
|
|
5
5
|
"type": "module",
|
|
6
6
|
"bin": {
|
|
@@ -32,9 +32,10 @@
|
|
|
32
32
|
"dependencies": {
|
|
33
33
|
"effect": "^3.21.0",
|
|
34
34
|
"yaml": "^2.8.3",
|
|
35
|
-
"@galaxy-tool-util/cli": "1.
|
|
36
|
-
"@galaxy-tool-util/
|
|
37
|
-
"@galaxy-tool-util/
|
|
35
|
+
"@galaxy-tool-util/cli": "1.2.0",
|
|
36
|
+
"@galaxy-tool-util/connection-validation": "1.2.0",
|
|
37
|
+
"@galaxy-tool-util/core": "1.2.0",
|
|
38
|
+
"@galaxy-tool-util/schema": "1.2.0"
|
|
38
39
|
},
|
|
39
40
|
"devDependencies": {
|
|
40
41
|
"@types/node": "^25.5.0",
|