@galaxy-tool-util/core 0.2.0 → 1.0.0

package/dist/index.d.ts

@@ -1,11 +1,10 @@
 /**
  * @module @galaxy-tool-util/core
  *
- * Galaxy tool cache, ToolShed/Galaxy API client, and ParsedTool model.
- * Handles fetching tool metadata from remote sources and caching locally.
+ * Universal entry — safe to import in Node or browser. Symbols that require
+ * Node built-ins (filesystem cache storage, YAML config loading) live under
+ * `@galaxy-tool-util/core/node`.
  */
-/** Effect Schema for parsed tool metadata (id, version, name, inputs, outputs, etc.). */
-export { ParsedTool, HelpContent, XrefDict, Citation } from "./models/parsed-tool.js";
 export { 
 /** Parse a full ToolShed tool ID into ToolCoordinates (toolshedUrl, trsToolId, version). */
 parseToolshedToolId, 
@@ -15,14 +14,20 @@ toolIdFromTrs,
 cacheKey, 
 /** Cache metadata index — tracks tool IDs, versions, sources, and timestamps. */
 CacheIndex, 
-/** Two-layer cache (memory + filesystem) for parsed tool metadata. */
-ToolCache, 
-/** Resolve cache directory from explicit override, env var, or default. */
-getCacheDir, DEFAULT_CACHE_DIR, CACHE_DIR_ENV_VAR, DEFAULT_TOOLSHED_URL, TOOLSHED_URL_ENV_VAR, } from "./cache/index.js";
-export type { ToolCoordinates, CacheIndexEntry, CacheIndexData } from "./cache/index.js";
+/** Two-layer cache (memory + storage) for parsed tool metadata. */
+ToolCache, DEFAULT_TOOLSHED_URL, TOOLSHED_URL_ENV_VAR, } from "./cache/index.js";
+export type { ToolCoordinates, CacheIndexEntry, CacheIndexData, CacheStorage, ResolvedCoordinates, } from "./cache/index.js";
+/** IndexedDB-backed cache storage for browser/Web Worker contexts. */
+export { IndexedDBCacheStorage } from "./cache/index.js";
 /** Fetch parsed tool metadata from a ToolShed instance via TRS API. */
 export { fetchFromToolShed, fetchFromGalaxy, ToolFetchError } from "./client/index.js";
+/** Query TRS for the set of versions published for a tool. */
+export { getTRSToolVersions, getLatestTRSToolVersion } from "./client/index.js";
+export type { TRSToolVersion } from "./client/index.js";
 /** High-level service: fetch tools from multiple sources with automatic caching. */
 export { ToolInfoService } from "./tool-info.js";
 export type { ToolInfoOptions, ToolSource } from "./tool-info.js";
+/** Shared YAML config schema for tool sources and cache settings. */
+export { WorkflowToolConfig, ToolSourceConfig, ToolCacheConfig, toolInfoOptionsFromConfig, } from "./config.js";
+export type { ConfigToolInfoOptions } from "./config.js";
 //# sourceMappingURL=index.d.ts.map

package/dist/index.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAEH,OAAO;AACL,4FAA4F;AAC5F,mBAAmB;AACnB,oEAAoE;AACpE,aAAa;AACb,sFAAsF;AACtF,QAAQ;AACR,iFAAiF;AACjF,UAAU;AACV,mEAAmE;AACnE,SAAS,EACT,oBAAoB,EACpB,oBAAoB,GACrB,MAAM,kBAAkB,CAAC;AAC1B,YAAY,EACV,eAAe,EACf,eAAe,EACf,cAAc,EACd,YAAY,EACZ,mBAAmB,GACpB,MAAM,kBAAkB,CAAC;AAC1B,sEAAsE;AACtE,OAAO,EAAE,qBAAqB,EAAE,MAAM,kBAAkB,CAAC;AACzD,uEAAuE;AACvE,OAAO,EAAE,iBAAiB,EAAE,eAAe,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACvF,8DAA8D;AAC9D,OAAO,EAAE,kBAAkB,EAAE,uBAAuB,EAAE,MAAM,mBAAmB,CAAC;AAChF,YAAY,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACxD,oFAAoF;AACpF,OAAO,EAAE,eAAe,EAAE,MAAM,gBAAgB,CAAC;AACjD,YAAY,EAAE,eAAe,EAAE,UAAU,EAAE,MAAM,gBAAgB,CAAC;AAClE,qEAAqE;AACrE,OAAO,EACL,kBAAkB,EAClB,gBAAgB,EAChB,eAAe,EACf,yBAAyB,GAC1B,MAAM,aAAa,CAAC;AACrB,YAAY,EAAE,qBAAqB,EAAE,MAAM,aAAa,CAAC"}

package/dist/index.js

@@ -1,11 +1,10 @@
 /**
  * @module @galaxy-tool-util/core
  *
- * Galaxy tool cache, ToolShed/Galaxy API client, and ParsedTool model.
- * Handles fetching tool metadata from remote sources and caching locally.
+ * Universal entry — safe to import in Node or browser. Symbols that require
+ * Node built-ins (filesystem cache storage, YAML config loading) live under
+ * `@galaxy-tool-util/core/node`.
  */
-/** Effect Schema for parsed tool metadata (id, version, name, inputs, outputs, etc.). */
-export { ParsedTool, HelpContent, XrefDict, Citation } from "./models/parsed-tool.js";
 export { 
 /** Parse a full ToolShed tool ID into ToolCoordinates (toolshedUrl, trsToolId, version). */
 parseToolshedToolId, 
@@ -15,12 +14,16 @@ toolIdFromTrs,
 cacheKey, 
 /** Cache metadata index — tracks tool IDs, versions, sources, and timestamps. */
 CacheIndex, 
-/** Two-layer cache (memory + filesystem) for parsed tool metadata. */
-ToolCache, 
-/** Resolve cache directory from explicit override, env var, or default. */
-getCacheDir, DEFAULT_CACHE_DIR, CACHE_DIR_ENV_VAR, DEFAULT_TOOLSHED_URL, TOOLSHED_URL_ENV_VAR, } from "./cache/index.js";
+/** Two-layer cache (memory + storage) for parsed tool metadata. */
+ToolCache, DEFAULT_TOOLSHED_URL, TOOLSHED_URL_ENV_VAR, } from "./cache/index.js";
+/** IndexedDB-backed cache storage for browser/Web Worker contexts. */
+export { IndexedDBCacheStorage } from "./cache/index.js";
 /** Fetch parsed tool metadata from a ToolShed instance via TRS API. */
 export { fetchFromToolShed, fetchFromGalaxy, ToolFetchError } from "./client/index.js";
+/** Query TRS for the set of versions published for a tool. */
+export { getTRSToolVersions, getLatestTRSToolVersion } from "./client/index.js";
 /** High-level service: fetch tools from multiple sources with automatic caching. */
 export { ToolInfoService } from "./tool-info.js";
+/** Shared YAML config schema for tool sources and cache settings. */
+export { WorkflowToolConfig, ToolSourceConfig, ToolCacheConfig, toolInfoOptionsFromConfig, } from "./config.js";
 //# sourceMappingURL=index.js.map

package/dist/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,yFAAyF;AACzF,OAAO,EAAE,UAAU,EAAE,WAAW,EAAE,QAAQ,EAAE,QAAQ,EAAE,MAAM,yBAAyB,CAAC;AACtF,OAAO;AACL,4FAA4F;AAC5F,mBAAmB;AACnB,oEAAoE;AACpE,aAAa;AACb,sFAAsF;AACtF,QAAQ;AACR,iFAAiF;AACjF,UAAU;AACV,sEAAsE;AACtE,SAAS;AACT,2EAA2E;AAC3E,WAAW,EACX,iBAAiB,EACjB,iBAAiB,EACjB,oBAAoB,EACpB,oBAAoB,GACrB,MAAM,kBAAkB,CAAC;AAE1B,uEAAuE;AACvE,OAAO,EAAE,iBAAiB,EAAE,eAAe,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACvF,oFAAoF;AACpF,OAAO,EAAE,eAAe,EAAE,MAAM,gBAAgB,CAAC"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAEH,OAAO;AACL,4FAA4F;AAC5F,mBAAmB;AACnB,oEAAoE;AACpE,aAAa;AACb,sFAAsF;AACtF,QAAQ;AACR,iFAAiF;AACjF,UAAU;AACV,mEAAmE;AACnE,SAAS,EACT,oBAAoB,EACpB,oBAAoB,GACrB,MAAM,kBAAkB,CAAC;AAQ1B,sEAAsE;AACtE,OAAO,EAAE,qBAAqB,EAAE,MAAM,kBAAkB,CAAC;AACzD,uEAAuE;AACvE,OAAO,EAAE,iBAAiB,EAAE,eAAe,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACvF,8DAA8D;AAC9D,OAAO,EAAE,kBAAkB,EAAE,uBAAuB,EAAE,MAAM,mBAAmB,CAAC;AAEhF,oFAAoF;AACpF,OAAO,EAAE,eAAe,EAAE,MAAM,gBAAgB,CAAC;AAEjD,qEAAqE;AACrE,OAAO,EACL,kBAAkB,EAClB,gBAAgB,EAChB,eAAe,EACf,yBAAyB,GAC1B,MAAM,aAAa,CAAC"}

package/dist/node.d.ts

@@ -0,0 +1,12 @@
+/**
+ * @module @galaxy-tool-util/core/node
+ *
+ * Node-only surface: filesystem cache storage, YAML config loading, and
+ * helpers that assume Node built-ins (`fs`, `path`, `os`, `process.env`).
+ *
+ * Browser/Web Worker code should import from `@galaxy-tool-util/core` instead.
+ */
+export { FilesystemCacheStorage, DEFAULT_CACHE_DIR, CACHE_DIR_ENV_VAR, getCacheDir, makeNodeToolCache, makeNodeToolInfoService, } from "./cache/node.js";
+export type { NodeToolCacheOptions, NodeToolInfoOptions } from "./cache/node.js";
+export { loadWorkflowToolConfig } from "./config-node.js";
+//# sourceMappingURL=node.d.ts.map

package/dist/node.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"node.d.ts","sourceRoot":"","sources":["../src/node.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH,OAAO,EACL,sBAAsB,EACtB,iBAAiB,EACjB,iBAAiB,EACjB,WAAW,EACX,iBAAiB,EACjB,uBAAuB,GACxB,MAAM,iBAAiB,CAAC;AACzB,YAAY,EAAE,oBAAoB,EAAE,mBAAmB,EAAE,MAAM,iBAAiB,CAAC;AAEjF,OAAO,EAAE,sBAAsB,EAAE,MAAM,kBAAkB,CAAC"}

package/dist/node.js

@@ -0,0 +1,11 @@
+/**
+ * @module @galaxy-tool-util/core/node
+ *
+ * Node-only surface: filesystem cache storage, YAML config loading, and
+ * helpers that assume Node built-ins (`fs`, `path`, `os`, `process.env`).
+ *
+ * Browser/Web Worker code should import from `@galaxy-tool-util/core` instead.
+ */
+export { FilesystemCacheStorage, DEFAULT_CACHE_DIR, CACHE_DIR_ENV_VAR, getCacheDir, makeNodeToolCache, makeNodeToolInfoService, } from "./cache/node.js";
+export { loadWorkflowToolConfig } from "./config-node.js";
+//# sourceMappingURL=node.js.map

package/dist/node.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"node.js","sourceRoot":"","sources":["../src/node.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH,OAAO,EACL,sBAAsB,EACtB,iBAAiB,EACjB,iBAAiB,EACjB,WAAW,EACX,iBAAiB,EACjB,uBAAuB,GACxB,MAAM,iBAAiB,CAAC;AAGzB,OAAO,EAAE,sBAAsB,EAAE,MAAM,kBAAkB,CAAC"}

package/dist/tool-info.d.ts

@@ -1,5 +1,6 @@
-import type { ParsedTool } from "./models/parsed-tool.js";
+import type { ParsedTool } from "@galaxy-tool-util/schema";
 import { ToolCache } from "./cache/tool-cache.js";
+import type { CacheStorage } from "./cache/storage/interface.js";
 /** A remote source for fetching tool metadata. */
 export interface ToolSource {
     type: "toolshed" | "galaxy";
@@ -7,7 +8,8 @@ export interface ToolSource {
 }
 /** Options for constructing a {@link ToolInfoService}. */
 export interface ToolInfoOptions {
-    cacheDir?: string;
+    /** Cache storage backend — FilesystemCacheStorage (Node) or IndexedDBCacheStorage (browser). */
+    storage: CacheStorage;
     defaultToolshedUrl?: string;
     /** Multiple sources tried in order. If provided, overrides defaultToolshedUrl/galaxyUrl. */
     sources?: ToolSource[];
@@ -23,8 +25,13 @@ export declare class ToolInfoService {
     readonly cache: ToolCache;
     private readonly sources;
     private readonly fetcher;
-    constructor(opts?: ToolInfoOptions);
+    constructor(opts: ToolInfoOptions);
     getToolInfo(toolId: string, toolVersion?: string | null): Promise<ParsedTool | null>;
+    /**
+     * Resolve the latest TRS version for a tool on a Tool Shed. Returns `null`
+     * if the tool is unknown to the shed or has no published versions.
+     */
+    private resolveLatestVersion;
     addTool(toolId: string, toolVersion: string, parsedTool: ParsedTool, source?: string, sourceUrl?: string): Promise<string>;
 }
 //# sourceMappingURL=tool-info.d.ts.map

package/dist/tool-info.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"tool-info.d.ts","sourceRoot":"","sources":["../src/tool-info.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,yBAAyB,CAAC;AAC1D,OAAO,EAAE,SAAS,EAAE,MAAM,uBAAuB,CAAC;AAIlD,kDAAkD;AAClD,MAAM,WAAW,UAAU;IACzB,IAAI,EAAE,UAAU,GAAG,QAAQ,CAAC;IAC5B,GAAG,EAAE,MAAM,CAAC;CACb;AAED,0DAA0D;AAC1D,MAAM,WAAW,eAAe;IAC9B,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,kBAAkB,CAAC,EAAE,MAAM,CAAC;IAC5B,4FAA4F;IAC5F,OAAO,CAAC,EAAE,UAAU,EAAE,CAAC;IACvB,4EAA4E;IAC5E,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,OAAO,CAAC,EAAE,OAAO,KAAK,CAAC;CACxB;AAED;;;GAGG;AACH,qBAAa,eAAe;IAC1B,QAAQ,CAAC,KAAK,EAAE,SAAS,CAAC;IAC1B,OAAO,CAAC,QAAQ,CAAC,OAAO,CAAe;IACvC,OAAO,CAAC,QAAQ,CAAC,OAAO,CAAe;gBAE3B,IAAI,CAAC,EAAE,eAAe;IAuB5B,WAAW,CAAC,MAAM,EAAE,MAAM,EAAE,WAAW,CAAC,EAAE,MAAM,GAAG,IAAI,GAAG,OAAO,CAAC,UAAU,GAAG,IAAI,CAAC;IAqDpF,OAAO,CACX,MAAM,EAAE,MAAM,EACd,WAAW,EAAE,MAAM,EACnB,UAAU,EAAE,UAAU,EACtB,MAAM,GAAE,MAAgB,EACxB,SAAS,GAAE,MAAW,GACrB,OAAO,CAAC,MAAM,CAAC;CAOnB"}
+{"version":3,"file":"tool-info.d.ts","sourceRoot":"","sources":["../src/tool-info.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,0BAA0B,CAAC;AAC3D,OAAO,EAAE,SAAS,EAAE,MAAM,uBAAuB,CAAC;AAIlD,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,8BAA8B,CAAC;AAEjE,kDAAkD;AAClD,MAAM,WAAW,UAAU;IACzB,IAAI,EAAE,UAAU,GAAG,QAAQ,CAAC;IAC5B,GAAG,EAAE,MAAM,CAAC;CACb;AAED,0DAA0D;AAC1D,MAAM,WAAW,eAAe;IAC9B,gGAAgG;IAChG,OAAO,EAAE,YAAY,CAAC;IACtB,kBAAkB,CAAC,EAAE,MAAM,CAAC;IAC5B,4FAA4F;IAC5F,OAAO,CAAC,EAAE,UAAU,EAAE,CAAC;IACvB,4EAA4E;IAC5E,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,OAAO,CAAC,EAAE,OAAO,KAAK,CAAC;CACxB;AAED;;;GAGG;AACH,qBAAa,eAAe;IAC1B,QAAQ,CAAC,KAAK,EAAE,SAAS,CAAC;IAC1B,OAAO,CAAC,QAAQ,CAAC,OAAO,CAAe;IACvC,OAAO,CAAC,QAAQ,CAAC,OAAO,CAAe;gBAE3B,IAAI,EAAE,eAAe;IAsB3B,WAAW,CAAC,MAAM,EAAE,MAAM,EAAE,WAAW,CAAC,EAAE,MAAM,GAAG,IAAI,GAAG,OAAO,CAAC,UAAU,GAAG,IAAI,CAAC;IAyD1F;;;OAGG;YACW,oBAAoB;IAa5B,OAAO,CACX,MAAM,EAAE,MAAM,EACd,WAAW,EAAE,MAAM,EACnB,UAAU,EAAE,UAAU,EACtB,MAAM,GAAE,MAAgB,EACxB,SAAS,GAAE,MAAW,GACrB,OAAO,CAAC,MAAM,CAAC;CAOnB"}

package/dist/tool-info.js

@@ -1,6 +1,7 @@
 import { ToolCache } from "./cache/tool-cache.js";
 import { cacheKey } from "./cache/cache-key.js";
 import { fetchFromToolShed, fetchFromGalaxy } from "./client/toolshed.js";
+import { getLatestTRSToolVersion } from "./client/trs.js";
 /**
  * High-level service for fetching Galaxy tool metadata with automatic caching.
  * Tries configured sources in order and caches on first successful fetch.
@@ -11,33 +12,36 @@ export class ToolInfoService {
     fetcher;
     constructor(opts) {
         this.cache = new ToolCache({
-            cacheDir: opts?.cacheDir,
-            defaultToolshedUrl: opts?.defaultToolshedUrl,
+            storage: opts.storage,
+            defaultToolshedUrl: opts.defaultToolshedUrl,
         });
-        this.fetcher = opts?.fetcher ?? globalThis.fetch;
-        if (opts?.sources && opts.sources.length > 0) {
+        this.fetcher = opts.fetcher ?? globalThis.fetch;
+        if (opts.sources && opts.sources.length > 0) {
             this.sources = opts.sources;
         }
         else {
-            // Build sources from legacy options
             this.sources = [
                 {
                     type: "toolshed",
-                    url: opts?.defaultToolshedUrl ?? this.cache.defaultToolshedUrl,
+                    url: opts.defaultToolshedUrl ?? this.cache.defaultToolshedUrl,
                 },
             ];
-            if (opts?.galaxyUrl) {
+            if (opts.galaxyUrl) {
                 this.sources.push({ type: "galaxy", url: opts.galaxyUrl });
             }
         }
     }
     async getToolInfo(toolId, toolVersion) {
         const coords = this.cache.resolveToolCoordinates(toolId, toolVersion);
-        if (coords.version === null) {
-            throw new Error(`No version available for tool: ${toolId}`);
+        let resolvedVersion = coords.version;
+        if (resolvedVersion === null) {
+            resolvedVersion = await this.resolveLatestVersion(coords.toolshedUrl, coords.trsToolId);
+            if (resolvedVersion === null) {
+                throw new Error(`No version available for tool: ${toolId}`);
+            }
         }
-        const key = cacheKey(coords.toolshedUrl, coords.trsToolId, coords.version);
-        // Check filesystem cache (ToolCache checks memory first internally)
+        const key = await cacheKey(coords.toolshedUrl, coords.trsToolId, resolvedVersion);
+        // Check storage cache (ToolCache checks memory first internally)
         const cached = await this.cache.loadCached(key);
         if (cached !== null)
             return cached;
@@ -48,16 +52,16 @@ export class ToolInfoService {
                 let sourceLabel;
                 let sourceUrl;
                 if (source.type === "toolshed") {
-                    parsedTool = await fetchFromToolShed(source.url, coords.trsToolId, coords.version, this.fetcher);
+                    parsedTool = await fetchFromToolShed(source.url, coords.trsToolId, resolvedVersion, this.fetcher);
                     sourceLabel = "api";
-                    sourceUrl = `${source.url}/api/tools/${coords.trsToolId}/versions/${coords.version}`;
+                    sourceUrl = `${source.url}/api/tools/${coords.trsToolId}/versions/${resolvedVersion}`;
                 }
                 else {
-                    parsedTool = await fetchFromGalaxy(source.url, toolId, toolVersion, this.fetcher);
+                    parsedTool = await fetchFromGalaxy(source.url, toolId, resolvedVersion, this.fetcher);
                     sourceLabel = "galaxy";
                     sourceUrl = `${source.url}/api/tools/${encodeURIComponent(toolId)}/parsed`;
                 }
-                await this.cache.saveTool(key, parsedTool, coords.readableId, coords.version, sourceLabel, sourceUrl);
+                await this.cache.saveTool(key, parsedTool, coords.readableId, resolvedVersion, sourceLabel, sourceUrl);
                 return parsedTool;
             }
             catch (err) {
@@ -67,10 +71,24 @@ export class ToolInfoService {
         }
         return null;
     }
+    /**
+     * Resolve the latest TRS version for a tool on a Tool Shed. Returns `null`
+     * if the tool is unknown to the shed or has no published versions.
+     */
+    async resolveLatestVersion(toolshedUrl, trsToolId) {
+        try {
+            return await getLatestTRSToolVersion(toolshedUrl, trsToolId, this.fetcher);
+        }
+        catch (err) {
+            const msg = err instanceof Error ? err.message : String(err);
+            console.debug(`TRS latest-version lookup failed for ${trsToolId} on ${toolshedUrl}: ${msg}`);
+            return null;
+        }
+    }
     async addTool(toolId, toolVersion, parsedTool, source = "local", sourceUrl = "") {
         const coords = this.cache.resolveToolCoordinates(toolId, toolVersion);
         const version = coords.version ?? toolVersion;
-        const key = cacheKey(coords.toolshedUrl, coords.trsToolId, version);
+        const key = await cacheKey(coords.toolshedUrl, coords.trsToolId, version);
         await this.cache.saveTool(key, parsedTool, coords.readableId, version, source, sourceUrl);
         return key;
     }

package/dist/tool-info.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,13 +1,20 @@
 {
   "name": "@galaxy-tool-util/core",
-  "version": "0.2.0",
+  "version": "1.0.0",
   "description": "Galaxy tool cache, ToolShed client, and ParsedTool models",
   "type": "module",
+  "sideEffects": false,
   "exports": {
     ".": {
       "types": "./dist/index.d.ts",
+      "browser": "./dist/index.js",
       "import": "./dist/index.js"
-    }
+    },
+    "./node": {
+      "types": "./dist/node.d.ts",
+      "import": "./dist/node.js"
+    },
+    "./package.json": "./package.json"
   },
   "files": [
     "dist",
@@ -25,11 +32,12 @@
   },
   "license": "MIT",
   "devDependencies": {
-    "@types/node": "^25.5.0",
-    "yaml": "^2.8.3"
+    "@types/node": "^25.5.0"
   },
   "dependencies": {
-    "effect": "^3.21.0"
+    "effect": "^3.21.0",
+    "yaml": "^2.8.3",
+    "@galaxy-tool-util/schema": "1.0.0"
   },
   "scripts": {
     "build": "tsc",
@@ -38,6 +46,10 @@
     "test:watch": "vitest",
     "lint": "eslint src/ test/",
     "format": "prettier --check 'src/**/*.ts' 'test/**/*.ts'",
-    "format-fix": "prettier --write 'src/**/*.ts' 'test/**/*.ts'"
+    "format-fix": "prettier --write 'src/**/*.ts' 'test/**/*.ts'",
+    "lint:pkg": "publint",
+    "check:types": "attw --pack . --profile esm-only",
+    "check:browser": "node scripts/verify-browser-entry.mjs",
+    "test:browser": "vitest run --config vitest.browser.config.ts"
   }
 }

package/dist/models/parsed-tool.d.ts

@@ -1,46 +0,0 @@
-import * as S from "effect/Schema";
-/** Tool help content with format (rst, markdown, etc.) and rendered content. */
-export declare const HelpContent: S.Struct<{
-    format: typeof S.String;
-    content: typeof S.String;
-}>;
-/** External reference (e.g. bio.tools ID, bioconductor package). */
-export declare const XrefDict: S.Struct<{
-    value: typeof S.String;
-    type: typeof S.String;
-}>;
-/** Tool citation entry (bibtex, doi, etc.). */
-export declare const Citation: S.Struct<{
-    type: typeof S.String;
-    content: typeof S.String;
-}>;
-/**
- * Effect Schema for parsed Galaxy tool metadata as returned by the ToolShed TRS API
- * or Galaxy's /api/tools/:id/parsed endpoint.
- */
-export declare const ParsedTool: S.Struct<{
-    id: typeof S.String;
-    version: S.NullOr<typeof S.String>;
-    name: typeof S.String;
-    description: S.transform<S.NullOr<typeof S.String>, S.NullOr<typeof S.String>>;
-    inputs: S.Array$<typeof S.Unknown>;
-    outputs: S.Array$<typeof S.Unknown>;
-    citations: S.Array$<S.Struct<{
-        type: typeof S.String;
-        content: typeof S.String;
-    }>>;
-    license: S.NullOr<typeof S.String>;
-    profile: S.NullOr<typeof S.String>;
-    edam_operations: S.Array$<typeof S.String>;
-    edam_topics: S.Array$<typeof S.String>;
-    xrefs: S.Array$<S.Struct<{
-        value: typeof S.String;
-        type: typeof S.String;
-    }>>;
-    help: S.optional<S.Union<[S.Struct<{
-        format: typeof S.String;
-        content: typeof S.String;
-    }>, typeof S.Null]>>;
-}>;
-export type ParsedTool = S.Schema.Type<typeof ParsedTool>;
-//# sourceMappingURL=parsed-tool.d.ts.map

package/dist/models/parsed-tool.d.ts.map

@@ -1 +0,0 @@
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package/dist/models/parsed-tool.js

@@ -1,41 +0,0 @@
-import * as S from "effect/Schema";
-/** Tool help content with format (rst, markdown, etc.) and rendered content. */
-export const HelpContent = S.Struct({
-    format: S.String,
-    content: S.String,
-});
-/** External reference (e.g. bio.tools ID, bioconductor package). */
-export const XrefDict = S.Struct({
-    value: S.String,
-    type: S.String,
-});
-/** Tool citation entry (bibtex, doi, etc.). */
-export const Citation = S.Struct({
-    type: S.String,
-    content: S.String,
-});
-/** Normalize empty string to null for description field. */
-const NullableDescription = S.transform(S.NullOr(S.String), S.NullOr(S.String), {
-    decode: (val) => (val === "" ? null : val),
-    encode: (val) => val,
-});
-/**
- * Effect Schema for parsed Galaxy tool metadata as returned by the ToolShed TRS API
- * or Galaxy's /api/tools/:id/parsed endpoint.
- */
-export const ParsedTool = S.Struct({
-    id: S.String,
-    version: S.NullOr(S.String),
-    name: S.String,
-    description: NullableDescription,
-    inputs: S.Array(S.Unknown),
-    outputs: S.Array(S.Unknown),
-    citations: S.Array(Citation),
-    license: S.NullOr(S.String),
-    profile: S.NullOr(S.String),
-    edam_operations: S.Array(S.String),
-    edam_topics: S.Array(S.String),
-    xrefs: S.Array(XrefDict),
-    help: S.optional(S.Union(HelpContent, S.Null)),
-});
-//# sourceMappingURL=parsed-tool.js.map

package/dist/models/parsed-tool.js.map

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