@framers/agentos 0.1.255 → 0.2.1

package/dist/memory/retrieval/graph/extraction/HeuristicEntityExtractor.js

@@ -0,0 +1,108 @@
+/**
+ * @fileoverview Heuristic entity extraction over free-form text.
+ *
+ * Zero-LLM, deterministic regex-based extraction of five high-IDF entity
+ * families: proper nouns, ISO dates, named dates, currency amounts, and
+ * numeric amounts with common units. Intended for populating
+ * `MemoryTrace.entities` at encode time and seeding Anderson spreading
+ * activation at retrieve time.
+ *
+ * Design notes:
+ * - Sentence-start caps are filtered (common false positive: "The",
+ *   "A", "I" start sentences without being proper nouns). The filter
+ *   is a fixed lowercase-stopword list.
+ * - Case is preserved in output (entity labels are case-sensitive downstream).
+ * - Output is deduplicated by exact-match and capped at 50 entries.
+ * - `slugifyEntityId` produces deterministic slug IDs so upsert at
+ *   ingest and lookup at retrieve resolve to the same entity.
+ *
+ * @module agentos/memory/retrieval/graph/extraction/HeuristicEntityExtractor
+ */
+// ---------------------------------------------------------------------------
+// Patterns
+// ---------------------------------------------------------------------------
+const PROPER_NOUN_RE = /\b[A-Z][a-zA-Z]+(?:\s+[A-Z][a-zA-Z]+){0,3}\b/g;
+const ISO_DATE_RE = /\b\d{4}-\d{2}-\d{2}\b/g;
+const NAMED_DATE_RE = /\b(?:Jan|Feb|Mar|Apr|May|Jun|Jul|Aug|Sep|Sept|Oct|Nov|Dec)(?:uary|ruary|ch|il|e|y|ust|tember|ober|ember)?\s+\d{1,2}(?:,?\s+\d{4})?\b/gi;
+const CURRENCY_RE = /(?:\$|£|€|¥|USD\s|EUR\s|GBP\s|JPY\s)\s?\d{1,3}(?:,\d{3})*(?:\.\d+)?(?:\s?[KMBkmb])?/g;
+const NUMERIC_UNIT_RE = /\b\d+(?:\.\d+)?\s?(?:kg|g|lb|lbs|oz|km|m|cm|mm|ft|in|days?|weeks?|months?|years?|hours?|hrs?|minutes?|mins?|seconds?|secs?|%)\b/gi;
+/** Sentence-start caps words that are almost never entities. */
+const SENTENCE_START_STOPWORDS = new Set([
+    'A', 'An', 'The', 'This', 'That', 'These', 'Those',
+    'I', 'We', 'You', 'They', 'He', 'She', 'It',
+    'My', 'Our', 'Your', 'Their', 'His', 'Her', 'Its',
+    'And', 'But', 'Or', 'So', 'Yet',
+    'If', 'When', 'While', 'After', 'Before', 'During',
+    'Here', 'There', 'Now', 'Then',
+    'Yes', 'No',
+]);
+const MAX_ENTITIES_PER_TEXT = 50;
+/**
+ * Extract entity labels from free-form text.
+ *
+ * Applies five regex pattern families, filters single-word sentence-start
+ * stopwords, normalizes whitespace, dedupes by exact match, and caps at
+ * {@link MAX_ENTITIES_PER_TEXT}.
+ *
+ * @param text - Free-form text (chunk content, query, etc.).
+ * @returns Deduplicated array of entity labels in document order.
+ */
+export function extractEntities(text) {
+    if (!text || !text.trim())
+        return [];
+    const raw = [];
+    for (const match of text.matchAll(PROPER_NOUN_RE)) {
+        const label = match[0].trim();
+        if (!label)
+            continue;
+        const firstWord = label.split(/\s+/)[0];
+        if (SENTENCE_START_STOPWORDS.has(firstWord) && !label.includes(' ')) {
+            continue;
+        }
+        raw.push(label);
+    }
+    for (const match of text.matchAll(ISO_DATE_RE)) {
+        raw.push(match[0]);
+    }
+    for (const match of text.matchAll(NAMED_DATE_RE)) {
+        raw.push(match[0].replace(/\s+/g, ' ').trim());
+    }
+    for (const match of text.matchAll(CURRENCY_RE)) {
+        raw.push(match[0].replace(/\s+/g, ' ').trim());
+    }
+    for (const match of text.matchAll(NUMERIC_UNIT_RE)) {
+        raw.push(match[0].replace(/\s+/g, ' ').trim());
+    }
+    const seen = new Set();
+    const deduped = [];
+    for (const label of raw) {
+        if (seen.has(label))
+            continue;
+        seen.add(label);
+        deduped.push(label);
+        if (deduped.length >= MAX_ENTITIES_PER_TEXT)
+            break;
+    }
+    return deduped;
+}
+/**
+ * Derive a deterministic entity ID from a label. Lowercases, strips
+ * non-alphanumeric characters except spaces, replaces whitespace with
+ * dashes, collapses runs of dashes.
+ *
+ * Idempotent: `slugifyEntityId(slugifyEntityId(x))` === `slugifyEntityId(x)`.
+ *
+ * @param label - Entity label from {@link extractEntities}.
+ * @returns Slug suitable for use as a stable entity-node id.
+ */
+export function slugifyEntityId(label) {
+    if (!label)
+        return '';
+    return label
+        .toLowerCase()
+        .replace(/[^a-z0-9\s-]/g, '')
+        .trim()
+        .replace(/\s+/g, '-')
+        .replace(/-+/g, '-');
+}
+//# sourceMappingURL=HeuristicEntityExtractor.js.map

package/dist/memory/retrieval/graph/extraction/HeuristicEntityExtractor.js.map

@@ -0,0 +1 @@
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package/dist/memory/retrieval/graph/extraction/index.d.ts

@@ -0,0 +1,5 @@
+/**
+ * @fileoverview Barrel export for heuristic entity extraction.
+ */
+export { extractEntities, slugifyEntityId } from './HeuristicEntityExtractor.js';
+//# sourceMappingURL=index.d.ts.map

package/dist/memory/retrieval/graph/extraction/index.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../../../src/memory/retrieval/graph/extraction/index.ts"],"names":[],"mappings":"AAAA;;GAEG;AACH,OAAO,EAAE,eAAe,EAAE,eAAe,EAAE,MAAM,+BAA+B,CAAC"}

package/dist/memory/retrieval/graph/extraction/index.js

@@ -0,0 +1,5 @@
+/**
+ * @fileoverview Barrel export for heuristic entity extraction.
+ */
+export { extractEntities, slugifyEntityId } from './HeuristicEntityExtractor.js';
+//# sourceMappingURL=index.js.map

package/dist/memory/retrieval/graph/extraction/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../../src/memory/retrieval/graph/extraction/index.ts"],"names":[],"mappings":"AAAA;;GAEG;AACH,OAAO,EAAE,eAAe,EAAE,eAAe,EAAE,MAAM,+BAA+B,CAAC"}

package/dist/memory/retrieval/store/MemoryStore.d.ts

@@ -28,6 +28,16 @@ export interface MemoryStoreConfig {
     mechanismsEngine?: import('../../mechanisms/CognitiveMechanismsEngine.js').CognitiveMechanismsEngine;
     /** Optional mood provider for reconsolidation drift during recordAccess. */
     moodProvider?: () => PADState;
+    /**
+     * Step 13: enable graph activation. When true, `store` upserts entity
+     * nodes and `co_occurs` edges at ingest (from `trace.entities`), and
+     * `query` seeds Anderson spreading activation from query-extracted
+     * entities to compute the per-candidate `graphActivation` score
+     * (weight 0.10 in `RetrievalPriorityScorer`). Default: false, which
+     * preserves the legacy `graphActivation: 0` behavior for all
+     * candidates.
+     */
+    enableGraphActivation?: boolean;
 }
 export declare class MemoryStore {
     private config;
@@ -125,5 +135,17 @@ export declare class MemoryStore {
     }): MemoryTrace[];
     private registerScope;
     private getKnownScopes;
+    /**
+     * Step 13: upsert entity nodes for every label in `trace.entities` and
+     * create bidirectional `co_occurs` relations between every pair. Uses
+     * deterministic slug IDs via {@link slugifyEntityId}. Idempotent.
+     *
+     * Called from `store(trace)` only when `config.enableGraphActivation`
+     * is true. Non-critical: errors are caught and swallowed so an
+     * unavailable KG backend never blocks encoding.
+     *
+     * @param trace - The memory trace just persisted via `store`.
+     */
+    private ingestEntityGraph;
 }
 //# sourceMappingURL=MemoryStore.d.ts.map

package/dist/memory/retrieval/store/MemoryStore.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"MemoryStore.d.ts","sourceRoot":"","sources":["../../../../src/memory/retrieval/store/MemoryStore.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;GAUG;AAEH,OAAO,KAAK,EACV,YAAY,EAIb,MAAM,4CAA4C,CAAC;AACpD,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,+CAA+C,CAAC;AACvF,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,uCAAuC,CAAC;AAC7E,OAAO,KAAK,EACV,WAAW,EACX,UAAU,EACV,WAAW,EACX,yBAAyB,EACzB,iBAAiB,EACjB,uBAAuB,EACxB,MAAM,qBAAqB,CAAC;AAC7B,OAAO,KAAK,EAAE,QAAQ,EAAE,WAAW,EAAE,MAAM,sBAAsB,CAAC;AAElE,OAAO,EAGL,KAAK,qBAAqB,EAC3B,MAAM,gCAAgC,CAAC;AAmBxC,MAAM,WAAW,iBAAiB;IAChC,WAAW,EAAE,YAAY,CAAC;IAC1B,gBAAgB,EAAE,iBAAiB,CAAC;IACpC,cAAc,EAAE,eAAe,CAAC;IAChC,gDAAgD;IAChD,gBAAgB,EAAE,MAAM,CAAC;IACzB,uDAAuD;IACvD,kBAAkB,CAAC,EAAE,MAAM,CAAC;IAC5B,WAAW,CAAC,EAAE,WAAW,CAAC;IAC1B,qEAAqE;IACrE,gBAAgB,CAAC,EAAE,OAAO,+CAA+C,EAAE,yBAAyB,CAAC;IACrG,4EAA4E;IAC5E,YAAY,CAAC,EAAE,MAAM,QAAQ,CAAC;IAC9B;;;;;;;;OAQG;IACH,qBAAqB,CAAC,EAAE,OAAO,CAAC;CACjC;AAwED,qBAAa,WAAW;IACtB,OAAO,CAAC,MAAM,CAAoB;IAClC,OAAO,CAAC,KAAK,CAAc;IAC3B,+CAA+C;IAC/C,OAAO,CAAC,UAAU,CAAuC;IACzD,oFAAoF;IACpF,OAAO,CAAC,cAAc,CAAoC;IAC1D,kGAAkG;IAClG,OAAO,CAAC,WAAW,CAAmE;IACtF,qEAAqE;IACrE,OAAO,CAAC,gBAAgB,CAAC,CAAoF;IAC7G;;;;;OAKG;IACH,OAAO,CAAC,KAAK,CAAuD;gBAExD,MAAM,EAAE,iBAAiB;IAMrC;;;;;;OAMG;IACH,QAAQ,CAAC,KAAK,EAAE,OAAO,kBAAkB,EAAE,WAAW,GAAG,IAAI;IAI7D;;;OAGG;IACH,QAAQ,IAAI,OAAO,kBAAkB,EAAE,WAAW,GAAG,IAAI;IAQzD;;;OAGG;IACG,KAAK,CAAC,KAAK,EAAE,WAAW,GAAG,OAAO,CAAC,IAAI,CAAC;IAoH9C;;OAEG;IACG,KAAK,CACT,SAAS,EAAE,MAAM,EACjB,WAAW,EAAE,QAAQ,EACrB,OAAO,GAAE,yBAA8B,GACtC,OAAO,CAAC;QACT,MAAM,EAAE,iBAAiB,EAAE,CAAC;QAC5B,OAAO,EAAE,uBAAuB,EAAE,CAAC;QACnC;;;;WAIG;QACH,OAAO,EAAE;YACP,cAAc,EAAE,MAAM,CAAC;YACvB,SAAS,EAAE,MAAM,CAAC;SACnB,CAAC;KACH,CAAC;IAuKF;;;OAGG;IACG,YAAY,CAAC,OAAO,EAAE,MAAM,GAAG,OAAO,CAAC,qBAAqB,GAAG,IAAI,CAAC;IAmE1E;;;;;;;;;OASG;IACG,UAAU,CAAC,KAAK,EAAE,WAAW,EAAE,OAAO,EAAE,MAAM,EAAE,IAAI,CAAC,EAAE,UAAU,GAAG,OAAO,CAAC,WAAW,EAAE,CAAC;IAuDhG;;OAEG;IACG,UAAU,CAAC,OAAO,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;IAiBhD;;OAEG;IACH,QAAQ,CAAC,OAAO,EAAE,MAAM,GAAG,WAAW,GAAG,SAAS;IAIlD;;OAEG;IACH,aAAa,IAAI,MAAM;IAIvB;;OAEG;IACH,mBAAmB,IAAI,MAAM;IAQ7B;;OAEG;IACH,UAAU,CAAC,OAAO,CAAC,EAAE;QACnB,UAAU,CAAC,EAAE,OAAO,CAAC;QACrB,IAAI,CAAC,EAAE,UAAU,CAAC;QAClB,KAAK,CAAC,EAAE,WAAW,CAAC;QACpB,OAAO,CAAC,EAAE,MAAM,CAAC;KAClB,GAAG,WAAW,EAAE;IAoBjB,OAAO,CAAC,aAAa;IAKrB,OAAO,CAAC,cAAc;IAItB;;;;;;;;;;OAUG;YACW,iBAAiB;CA8ChC"}

package/dist/memory/retrieval/store/MemoryStore.js

@@ -12,6 +12,8 @@
 import { DEFAULT_DECAY_CONFIG } from '../../core/config.js';
 import { updateOnRetrieval, } from '../../core/decay/DecayModel.js';
 import { scoreAndRankTraces, detectPartiallyRetrieved, DEFAULT_SCORING_WEIGHTS, } from '../../core/decay/RetrievalPriorityScorer.js';
+import { extractEntities, slugifyEntityId, } from '../graph/extraction/index.js';
+import { spreadActivation } from '../graph/SpreadingActivation.js';
 // ---------------------------------------------------------------------------
 // Helpers
 // ---------------------------------------------------------------------------
@@ -144,7 +146,13 @@ export class MemoryStore {
             metadata: traceToMetadata(trace),
         };
         await this.config.vectorStore.upsert(collection, [doc]);
-        // Record in knowledge graph as episodic memory
+        // Record in knowledge graph as episodic memory. Step 13: thread
+        // `trace.entities` through as `entityIds` (slugified for deterministic
+        // lookup). Previously hardcoded to `[]`, which silenced the sixth
+        // signal in the composite scoring formula.
+        const entityIds = (trace.entities ?? [])
+            .map(slugifyEntityId)
+            .filter((id) => id.length > 0);
         try {
             await this.config.knowledgeGraph.recordMemory({
                 type: trace.type === 'episodic' ? 'conversation' : 'discovery',
@@ -153,7 +161,7 @@ export class MemoryStore {
                 participants: [trace.scopeId],
                 valence: trace.emotionalContext.valence,
                 importance: trace.encodingStrength,
-                entityIds: [],
+                entityIds,
                 embedding,
                 occurredAt: new Date(trace.createdAt).toISOString(),
                 outcome: 'unknown',
@@ -168,6 +176,12 @@ export class MemoryStore {
         catch {
             // Knowledge graph may not be available; non-critical
         }
+        // Step 13: upsert entity nodes and co-occurrence edges when the
+        // feature flag is on. Non-critical; swallows errors so an unavailable
+        // KG backend does not block encoding.
+        if (this.config.enableGraphActivation) {
+            await this.ingestEntityGraph(trace);
+        }
         // Cache trace and its embedding (avoids re-generation on recordAccess)
         this.traceCache.set(trace.id, trace);
         this.embeddingCache.set(trace.id, embedding);
@@ -235,6 +249,47 @@ export class MemoryStore {
         if (options.timeRange?.after) {
             metadataFilter.createdAt = { $gte: options.timeRange.after };
         }
+        // Step 13: compute graph activation for this query. Extract query
+        // entities, seed spreading activation from their entity nodes, build
+        // a per-entity-ID activation map. Per-candidate activation is computed
+        // inside the candidate loop as max over the trace's entity IDs. When
+        // the flag is off or no query entities are extracted, the map stays
+        // empty and all candidates get graphActivation = 0 (legacy).
+        const activationByEntityId = new Map();
+        if (this.config.enableGraphActivation) {
+            const queryEntities = extractEntities(queryText);
+            const seedIds = queryEntities
+                .map(slugifyEntityId)
+                .filter((id) => id.length > 0);
+            if (seedIds.length > 0) {
+                try {
+                    const activated = await spreadActivation({
+                        seedIds,
+                        getNeighbors: async (nodeId) => {
+                            const rels = await this.config.knowledgeGraph.getRelations(nodeId, { direction: 'both' });
+                            return rels
+                                .filter((r) => r.type === 'related_to' && r.label === 'co_occurs')
+                                .map((r) => ({
+                                id: r.sourceId === nodeId ? r.targetId : r.sourceId,
+                                weight: r.weight ?? 1,
+                            }));
+                        },
+                    });
+                    for (const node of activated) {
+                        activationByEntityId.set(node.memoryId, node.activation);
+                    }
+                    // Seeds themselves always count as fully-activated self-matches.
+                    for (const id of seedIds) {
+                        if (!activationByEntityId.has(id)) {
+                            activationByEntityId.set(id, 1);
+                        }
+                    }
+                }
+                catch {
+                    // Non-critical: activation failure falls back to legacy behavior.
+                }
+            }
+        }
         // Search across scopes
         const allCandidates = [];
         const vectorSearchStart = Date.now();
@@ -265,10 +320,25 @@ export class MemoryStore {
                     if (trace.scope && trace.scopeId) {
                         this.registerScope(trace.scope, trace.scopeId);
                     }
+                    // Step 13: per-candidate activation score. Max over the
+                    // trace's entity IDs (slugified) against the query-seeded
+                    // activation map. Zero when the feature flag is off, no
+                    // query entities matched, or the trace has no entities.
+                    let graphActivation = 0;
+                    if (this.config.enableGraphActivation && activationByEntityId.size > 0) {
+                        const ids = (trace.entities ?? [])
+                            .map(slugifyEntityId)
+                            .filter((id) => id.length > 0);
+                        for (const id of ids) {
+                            const a = activationByEntityId.get(id);
+                            if (a !== undefined && a > graphActivation)
+                                graphActivation = a;
+                        }
+                    }
                     allCandidates.push({
                         trace,
                         vectorSimilarity: result.similarityScore ?? 0,
-                        graphActivation: 0, // Batch 2
+                        graphActivation,
                     });
                 }
             }
@@ -503,5 +573,63 @@ export class MemoryStore {
     getKnownScopes() {
         return [...this.knownScopes.values()];
     }
+    /**
+     * Step 13: upsert entity nodes for every label in `trace.entities` and
+     * create bidirectional `co_occurs` relations between every pair. Uses
+     * deterministic slug IDs via {@link slugifyEntityId}. Idempotent.
+     *
+     * Called from `store(trace)` only when `config.enableGraphActivation`
+     * is true. Non-critical: errors are caught and swallowed so an
+     * unavailable KG backend never blocks encoding.
+     *
+     * @param trace - The memory trace just persisted via `store`.
+     */
+    async ingestEntityGraph(trace) {
+        const labels = trace.entities ?? [];
+        if (labels.length === 0)
+            return;
+        const kg = this.config.knowledgeGraph;
+        const now = new Date().toISOString();
+        const ids = [];
+        for (const label of labels) {
+            const id = slugifyEntityId(label);
+            if (!id)
+                continue;
+            try {
+                await kg.upsertEntity({
+                    id,
+                    type: 'concept',
+                    label,
+                    confidence: 1,
+                    source: { type: 'conversation', timestamp: now },
+                    properties: {},
+                });
+                ids.push(id);
+            }
+            catch {
+                // Non-critical.
+            }
+        }
+        for (let i = 0; i < ids.length; i++) {
+            for (let j = i + 1; j < ids.length; j++) {
+                try {
+                    await kg.upsertRelation({
+                        sourceId: ids[i],
+                        targetId: ids[j],
+                        type: 'related_to',
+                        label: 'co_occurs',
+                        weight: 1,
+                        bidirectional: true,
+                        confidence: 1,
+                        source: { type: 'conversation', timestamp: now },
+                        properties: { traceId: trace.id, timestamp: now },
+                    });
+                }
+                catch {
+                    // Non-critical.
+                }
+            }
+        }
+    }
 }
 //# sourceMappingURL=MemoryStore.js.map

package/dist/memory/retrieval/store/MemoryStore.js.map

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package/dist/provenance/config/PolicyProfiles.js

@@ -10,7 +10,7 @@
  *
  * @example
  * ```typescript
- * import { profiles } from '../../provenance/index.js';
+ * import { profiles } from '../../provenance';
  *
  * // For development:
  * const config = profiles.mutableDev();

package/dist/rag/RetrievalAugmentor.d.ts.map

@@ -1 +1 @@
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package/dist/rag/RetrievalAugmentor.js

@@ -1014,7 +1014,14 @@ export class RetrievalAugmentor {
                         const filterDeleteResult = await store.delete(collectionName, undefined, {
                             filter: { originalDocumentId: docId },
                         });
-                        successCount += filterDeleteResult.deletedCount;
+                        if (filterDeleteResult.deletedCount > 0) {
+                            successCount += filterDeleteResult.deletedCount;
+                        }
+                        else if (filterDeleteResult.deletedCount < 0) {
+                            // Some providers accept the delete request but do not
+                            // return an exact count. Count the logical document as handled.
+                            successCount += 1;
+                        }
                         if (filterDeleteResult.errors) {
                             filterDeleteResult.errors.forEach((err) => {
                                 errors.push({
@@ -1027,7 +1034,7 @@ export class RetrievalAugmentor {
                         }
                         // If the provider deleted matching chunks (or surfaced concrete
                         // errors), we do not need to fall back to direct ID deletion.
-                        if (filterDeleteResult.deletedCount > 0 || filterDeleteResult.errors?.length) {
+                        if (filterDeleteResult.deletedCount !== 0 || filterDeleteResult.errors?.length) {
                             continue;
                         }
                     }