@fodx/codelens 2.2.2 → 2.3.0

package/README.md

@@ -19,6 +19,8 @@ Cursor, Gemini CLI, opencode, Codex CLI) or directly from the terminal.
   ranked alongside FTS5 + symbol-name matches.
 - **Fresh** — query tools auto-refresh changed files before answering, flag
   budget-limited stale results, and `cl_expand` always reads from disk.
+- **Singleton runtime** — MCP entry processes for the same repo/worktree share
+  one local daemon, so one watcher/index coordinator serves many agent sessions.
 - **Compact** — returns ranked handles; expand only what you need.
 - **Durable** — saved contexts live in a separate DB and survive index rebuilds.
 - **Self-cleaning** — automatic TTL prunes inactive indexes.
@@ -27,7 +29,8 @@ Cursor, Gemini CLI, opencode, Codex CLI) or directly from the terminal.
 
 One command builds the tool, installs the `codelens` launcher, and wires the MCP
 server into detected agents/IDEs automatically (Claude Code, Cursor, Gemini CLI,
-opencode, Codex CLI). Requires Node.js ≥ 22.5.
+opencode, Codex CLI). Requires Node.js ≥ 22.5. The package is published on
+[npm as `@fodx/codelens`](https://www.npmjs.com/package/@fodx/codelens).
 
 **macOS / Linux:**
 ```bash
@@ -92,7 +95,10 @@ local) attaches to the active workspace via `--cwd ${workspaceFolder}`. Other
 hosts pin the concrete workspace path for local installs and rely on MCP Roots
 for global installs. Installed MCP configs default to `--auto-index missing`, so
 CodeLens starts a detached background index when a workspace/branch has no
-complete index yet; pass `--auto-index never` to disable.
+complete index yet; pass `--auto-index never` to disable. For MCP usage,
+default entry processes proxy to one local daemon per repo/worktree; that daemon
+owns the file watcher and index coordinator, so multiple agent sessions do not
+multiply watchers for the same checkout.
 
 **Routing instructions** are also written so the host prefers codelens tools for
 discovery over raw grep/read:
@@ -218,11 +224,13 @@ npm run eval:agent  # deterministic with/without-CodeLens discovery proxy
 - **Auto-index is eager per branch** — installed MCP configs start a detached
   `--auto-index missing` build when a workspace/branch has no complete index.
   `cl_refresh` remains available for explicit rebuilds and is guarded against
-  duplicating an active background index. The file watcher
-  handles incremental freshness thereafter (cold index ~3.5s for 2000 files).
+  duplicating an active background index. A singleton repo/worktree daemon owns
+  the file watcher and handles incremental freshness thereafter (cold index
+  ~3.5s for 2000 files).
 - **Routing hooks are advisory** (soft nudges, not hard blocks) per the no-
   throttling design decision — raw reads remain allowed for editing/verification.
-- **npm package** — published on npm as `@fodx/codelens`; releases are
+- **npm package** — published on npm as
+  [`@fodx/codelens`](https://www.npmjs.com/package/@fodx/codelens); releases are
   published automatically from `v*` git tags via the `publish` workflow. Use
   `npx -y @fodx/codelens` for manual MCP configuration. See
   `.github/workflows/publish.yml`.

package/build/src/runtime/daemon.js

@@ -0,0 +1,307 @@
+import { spawn } from "node:child_process";
+import { createHash } from "node:crypto";
+import { mkdirSync, readdirSync, readFileSync, rmSync, writeFileSync } from "node:fs";
+import { createConnection, createServer } from "node:net";
+import { homedir } from "node:os";
+import { join } from "node:path";
+const DEFAULT_STALE_MS = 30_000;
+function nowMs(opts) {
+    return opts?.now?.() ?? Date.now();
+}
+/** Stable daemon key: one daemon per real repo/worktree path. */
+export function daemonKey(repoRoot) {
+    return createHash("sha256").update(repoRoot).digest("hex").slice(0, 32);
+}
+function daemonRoot(home) {
+    return join(home ?? homedir(), ".codelens", "daemons");
+}
+function daemonPathsForKey(key, home) {
+    const dir = join(daemonRoot(home), key);
+    const socketPath = process.platform === "win32"
+        ? `\\\\.\\pipe\\codelens-${key}`
+        : join(dir, "daemon.sock");
+    return {
+        key,
+        dir,
+        lockDir: join(dir, "lock"),
+        metadataPath: join(dir, "daemon.json"),
+        socketPath,
+    };
+}
+/** Runtime coordination files for a repo/worktree daemon. */
+export function daemonPaths(repoRoot, opts) {
+    return daemonPathsForKey(daemonKey(repoRoot), opts?.home);
+}
+export function readDaemonMetadata(paths) {
+    try {
+        const parsed = JSON.parse(readFileSync(paths.metadataPath, "utf-8"));
+        if (parsed.key !== paths.key)
+            return null;
+        if (typeof parsed.repoRoot !== "string" || typeof parsed.socketPath !== "string")
+            return null;
+        if (typeof parsed.pid !== "number" || typeof parsed.startedAt !== "number" || typeof parsed.heartbeatAt !== "number")
+            return null;
+        return {
+            key: parsed.key,
+            repoRoot: parsed.repoRoot,
+            pid: parsed.pid,
+            startedAt: parsed.startedAt,
+            heartbeatAt: parsed.heartbeatAt,
+            socketPath: parsed.socketPath,
+        };
+    }
+    catch {
+        return null;
+    }
+}
+export function writeDaemonMetadata(paths, metadata) {
+    mkdirSync(paths.dir, { recursive: true });
+    writeFileSync(paths.metadataPath, JSON.stringify(metadata, null, 2) + "\n", "utf-8");
+}
+export function isProcessAlive(pid) {
+    if (!Number.isInteger(pid) || pid <= 0)
+        return false;
+    try {
+        process.kill(pid, 0);
+        return true;
+    }
+    catch (err) {
+        const code = err.code;
+        return code === "EPERM";
+    }
+}
+export function isDaemonStale(paths, opts) {
+    const metadata = readDaemonMetadata(paths);
+    if (!metadata)
+        return true;
+    if (!isProcessAlive(metadata.pid))
+        return true;
+    return nowMs(opts) - metadata.heartbeatAt > (opts?.staleMs ?? DEFAULT_STALE_MS);
+}
+export function cleanupDaemonState(paths) {
+    if (process.platform !== "win32")
+        rmSync(paths.socketPath, { force: true });
+    rmSync(paths.metadataPath, { force: true });
+    rmSync(paths.lockDir, { recursive: true, force: true });
+}
+export function cleanupStaleDaemon(paths, opts) {
+    if (!isDaemonStale(paths, opts))
+        return false;
+    cleanupDaemonState(paths);
+    return true;
+}
+function createMetadata(repoRoot, paths, pid, at) {
+    return {
+        key: paths.key,
+        repoRoot,
+        pid,
+        startedAt: at,
+        heartbeatAt: at,
+        socketPath: paths.socketPath,
+    };
+}
+function tryAcquireLock(repoRoot, paths, opts) {
+    try {
+        mkdirSync(paths.dir, { recursive: true });
+        mkdirSync(paths.lockDir);
+    }
+    catch (err) {
+        if (err.code === "EEXIST")
+            return null;
+        throw err;
+    }
+    const metadata = createMetadata(repoRoot, paths, opts?.pid ?? process.pid, nowMs(opts));
+    writeDaemonMetadata(paths, metadata);
+    return {
+        paths,
+        metadata,
+        heartbeat: () => {
+            metadata.heartbeatAt = Date.now();
+            writeDaemonMetadata(paths, metadata);
+        },
+        release: () => cleanupDaemonState(paths),
+    };
+}
+/** Acquire daemon ownership, reclaiming stale owner state once if needed. */
+export function acquireDaemonLock(repoRoot, opts) {
+    const paths = daemonPaths(repoRoot, opts);
+    const first = tryAcquireLock(repoRoot, paths, opts);
+    if (first)
+        return first;
+    if (!cleanupStaleDaemon(paths, opts))
+        return null;
+    return tryAcquireLock(repoRoot, paths, opts);
+}
+function listDaemonPathEntries(home) {
+    try {
+        return readdirSync(daemonRoot(home), { withFileTypes: true })
+            .filter((entry) => entry.isDirectory())
+            .map((entry) => daemonPathsForKey(entry.name, home));
+    }
+    catch {
+        return [];
+    }
+}
+async function waitForProcessExit(pid, timeoutMs, pollMs) {
+    const start = Date.now();
+    while (Date.now() - start < timeoutMs) {
+        if (!isProcessAlive(pid))
+            return true;
+        await new Promise((resolve) => setTimeout(resolve, pollMs));
+    }
+    return !isProcessAlive(pid);
+}
+/** Best-effort shutdown/cleanup for all known CodeLens daemon state. */
+export async function shutdownAllDaemons(opts) {
+    const result = { scanned: 0, signaled: 0, stopped: 0, staleCleaned: 0, skippedCurrent: 0, failed: 0 };
+    const timeoutMs = opts?.timeoutMs ?? 2_000;
+    const pollMs = opts?.pollMs ?? 100;
+    const signal = opts?.signal ?? "SIGTERM";
+    for (const paths of listDaemonPathEntries(opts?.home)) {
+        result.scanned++;
+        const metadata = readDaemonMetadata(paths);
+        if (!metadata || !isProcessAlive(metadata.pid)) {
+            cleanupDaemonState(paths);
+            result.staleCleaned++;
+            continue;
+        }
+        if (metadata.pid === process.pid) {
+            result.skippedCurrent++;
+            continue;
+        }
+        try {
+            process.kill(metadata.pid, signal);
+            result.signaled++;
+        }
+        catch {
+            if (!isProcessAlive(metadata.pid)) {
+                cleanupDaemonState(paths);
+                result.staleCleaned++;
+            }
+            else {
+                result.failed++;
+            }
+            continue;
+        }
+        if (await waitForProcessExit(metadata.pid, timeoutMs, pollMs)) {
+            cleanupDaemonState(paths);
+            result.stopped++;
+        }
+        else {
+            result.failed++;
+        }
+    }
+    return result;
+}
+/** Listen for local daemon clients on the repo/worktree socket. */
+export async function startDaemonSocketServer(paths, onConnection, opts) {
+    if (process.platform !== "win32")
+        rmSync(paths.socketPath, { force: true });
+    mkdirSync(paths.dir, { recursive: true });
+    const sockets = new Set();
+    let idleTimer = null;
+    const clearIdleTimer = () => {
+        if (!idleTimer)
+            return;
+        clearTimeout(idleTimer);
+        idleTimer = null;
+    };
+    const scheduleIdle = () => {
+        if (!opts?.onIdle || sockets.size > 0)
+            return;
+        clearIdleTimer();
+        idleTimer = setTimeout(() => {
+            idleTimer = null;
+            void Promise.resolve(opts.onIdle?.()).catch(() => { });
+        }, opts.idleMs ?? 30_000);
+    };
+    const server = createServer((socket) => {
+        clearIdleTimer();
+        sockets.add(socket);
+        socket.once("close", () => {
+            sockets.delete(socket);
+            scheduleIdle();
+        });
+        void Promise.resolve(onConnection(socket)).catch(() => socket.destroy());
+    });
+    await new Promise((resolve, reject) => {
+        const onError = (err) => {
+            server.off("listening", onListening);
+            reject(err);
+        };
+        const onListening = () => {
+            server.off("error", onError);
+            resolve();
+        };
+        server.once("error", onError);
+        server.once("listening", onListening);
+        server.listen(paths.socketPath);
+    });
+    scheduleIdle();
+    return {
+        activeConnections: () => sockets.size,
+        close: () => new Promise((resolve, reject) => {
+            clearIdleTimer();
+            for (const socket of sockets)
+                socket.destroy();
+            server.close((err) => {
+                if (err)
+                    reject(err);
+                else
+                    resolve();
+            });
+        }),
+    };
+}
+function connectDaemonSocket(paths) {
+    return new Promise((resolve, reject) => {
+        const socket = createConnection(paths.socketPath);
+        socket.once("connect", () => resolve(socket));
+        socket.once("error", (err) => {
+            socket.destroy();
+            reject(err);
+        });
+    });
+}
+async function waitForDaemonSocket(paths, timeoutMs) {
+    const start = Date.now();
+    let lastError;
+    while (Date.now() - start < timeoutMs) {
+        try {
+            return await connectDaemonSocket(paths);
+        }
+        catch (err) {
+            lastError = err;
+            await new Promise((resolve) => setTimeout(resolve, 100));
+        }
+    }
+    throw lastError instanceof Error ? lastError : new Error(`timed out waiting for daemon socket ${paths.socketPath}`);
+}
+/** Connect to an existing daemon, or spawn one and wait for its socket. */
+export async function connectOrStartDaemon(repoRoot, opts) {
+    const paths = daemonPaths(repoRoot);
+    try {
+        return await connectDaemonSocket(paths);
+    }
+    catch {
+        // No reachable daemon yet; check for stale owner state below.
+    }
+    cleanupStaleDaemon(paths);
+    try {
+        return await connectDaemonSocket(paths);
+    }
+    catch {
+        // Still no reachable daemon; spawn below.
+    }
+    const args = [opts.serverJs, "--cwd", repoRoot, "--daemon"];
+    if (opts.autoIndex)
+        args.splice(3, 0, "--auto-index", opts.autoIndex);
+    const child = spawn(process.execPath, args, {
+        detached: true,
+        stdio: "ignore",
+        env: opts.env ?? process.env,
+    });
+    child.unref();
+    return await waitForDaemonSocket(paths, opts.timeoutMs ?? 10_000);
+}
+//# sourceMappingURL=daemon.js.map

package/build/src/runtime/daemon.js.map

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package/build/src/server.js

@@ -16,6 +16,7 @@ import { registerWatcher } from "./index/reindex.js";
 import { VERSION } from "./version.js";
 import { detectScope } from "./git/scope.js";
 import { parseCwdArg, resolveCwd, isUsableCwd } from "./runtime/root.js";
+import { acquireDaemonLock, connectOrStartDaemon, startDaemonSocketServer } from "./runtime/daemon.js";
 import { createHash } from "node:crypto";
 import { mkdirSync, rmSync } from "node:fs";
 import { homedir } from "node:os";
@@ -71,50 +72,25 @@ function repoRootFromCwd(cwd) {
     return resolveCwd(cwd);
 }
 const CLI_COMMANDS = new Set(["current", "index", "refresh", "search", "related", "stats", "usage", "doctor", "install", "uninstall", "upgrade", "version", "--print-config", "-v", "--version", "--help", "-h"]);
-export async function main() {
-    // CLI dispatch: if the first arg is a known subcommand (bare word like
-    // `install` or a flag-style one like `--print-config`/`--version`), run the
-    // CLI with the FULL arg list so --target/--command/--yes are preserved.
-    // Otherwise start the MCP stdio server.
-    const parsed = parseCwdArg(process.argv.slice(2));
-    const fullArgs = parsed.args;
-    const head = fullArgs[0];
-    if (head && CLI_COMMANDS.has(head)) {
-        const code = await cli(process.argv.slice(2));
-        process.exit(code);
-        return;
-    }
-    // Smoke mode: register tools against an in-memory context and print names.
-    if (process.argv.includes("--smoke")) {
-        const ctx = { coreDb: openMemoryDb(), ctxDb: openMemoryContextDb(), repoRoot: "/tmp" };
-        const server = createServer(ctx);
-        void server;
-        console.log(JSON.stringify({ ok: true, tools: TOOLS.map((t) => t.name) }));
-        return;
-    }
-    const initialRoot = repoRootFromCwd(parsed.cwd);
+function createRuntimeController(initialRoot, opts) {
     const runtime = openRuntime(initialRoot);
     const ctx = runtime.ctx;
     let watcher = runtime.watcher;
     let stopPrune = runtime.stopPrune;
-    // Only treat root resolution as settled when an explicit, usable --cwd was
-    // given. If --cwd was missing/unusable (e.g. unexpanded ${workspaceFolder}),
-    // we fell back to process.cwd() and should still query MCP Roots.
-    let rootsChecked = isUsableCwd(parsed.cwd);
+    let rootsChecked = opts.rootsChecked;
     const serverRef = {};
-    const autoIndexMode = normalizeAutoIndexMode(parsed.autoIndex, "missing");
     let autoIndexTriggeredFor = null;
     function activateReadyIndex(scope) {
         activatePersistentIndexIfReady(ctx.coreDb, scope);
     }
     function checkAndTriggerAutoIndex(scope) {
-        if (!rootsChecked || autoIndexMode === "never" || !ctx.repoRoot)
+        if (!rootsChecked || opts.autoIndexMode === "never" || !ctx.repoRoot)
             return;
         const indexId = computeIndexId(scope);
         if (autoIndexTriggeredFor === indexId)
             return;
         activateReadyIndex(scope);
-        const shouldIndex = autoIndexMode === "always" || (autoIndexMode === "missing" && !hasPersistentIndex(ctx.coreDb, scope));
+        const shouldIndex = opts.autoIndexMode === "always" || (opts.autoIndexMode === "missing" && !hasPersistentIndex(ctx.coreDb, scope));
         if (!shouldIndex)
             return;
         autoIndexTriggeredFor = indexId;
@@ -155,24 +131,143 @@ export async function main() {
         activateReadyIndex(scope);
         checkAndTriggerAutoIndex(scope);
     }
-    async function beforeTool() {
-        await settleRootAndTriggerAutoIndex();
-    }
-    const server = createServer(ctx, beforeTool);
-    serverRef.current = server;
+    return {
+        ctx,
+        bindServer(server) { serverRef.current = server; },
+        beforeTool: settleRootAndTriggerAutoIndex,
+        settleRootAndTriggerAutoIndex,
+        rootsSettled: () => rootsChecked,
+        close: () => {
+            try {
+                watcher.stop();
+            }
+            catch { /* ignore */ }
+            try {
+                registerWatcher(null);
+            }
+            catch { /* ignore */ }
+            try {
+                stopPrune();
+            }
+            catch { /* ignore */ }
+            try {
+                ctx.coreDb.close();
+            }
+            catch { /* ignore */ }
+            try {
+                ctx.ctxDb.close();
+            }
+            catch { /* ignore */ }
+        },
+    };
+}
+async function startDirectMcpServer(parsed) {
+    const controller = createRuntimeController(repoRootFromCwd(parsed.cwd), {
+        rootsChecked: isUsableCwd(parsed.cwd),
+        autoIndexMode: normalizeAutoIndexMode(parsed.autoIndex, "missing"),
+    });
+    const server = createServer(controller.ctx, controller.beforeTool);
+    controller.bindServer(server);
     const transport = new StdioServerTransport();
     await server.connect(transport);
     // Explicit --cwd roots (Cursor's ${workspaceFolder}) are ready immediately;
     // roots-only clients may need initialize to complete first, so retry briefly.
     void (async () => {
         for (let i = 0; i < 10; i++) {
-            await settleRootAndTriggerAutoIndex();
-            if (rootsChecked)
+            await controller.settleRootAndTriggerAutoIndex();
+            if (controller.rootsSettled())
                 break;
             await new Promise((resolve) => setTimeout(resolve, 100));
         }
     })();
 }
+async function proxyStdioToDaemon(socket) {
+    await new Promise((resolve) => {
+        socket.once("close", resolve);
+        socket.once("end", resolve);
+        socket.once("error", resolve);
+        process.stdin.once("end", () => socket.end());
+        process.stdin.once("close", () => socket.end());
+        process.stdin.pipe(socket);
+        socket.pipe(process.stdout);
+    });
+}
+async function startProxyMcpServer(parsed) {
+    const repoRoot = repoRootFromCwd(parsed.cwd);
+    if (!isUsableCwd(parsed.cwd) && !detectScope(repoRoot)) {
+        await startDirectMcpServer(parsed);
+        return;
+    }
+    const socket = await connectOrStartDaemon(repoRoot, {
+        autoIndex: parsed.autoIndex,
+        serverJs: fileURLToPath(import.meta.url),
+    });
+    await proxyStdioToDaemon(socket);
+}
+async function startDaemon(parsed) {
+    const repoRoot = repoRootFromCwd(parsed.cwd);
+    const lock = acquireDaemonLock(repoRoot);
+    if (!lock)
+        throw new Error(`codelens daemon already running for ${repoRoot}`);
+    const daemonLock = lock;
+    const heartbeatMs = Number.parseInt(process.env.CODELENS_DAEMON_HEARTBEAT_MS ?? "5000", 10);
+    const idleMs = Number.parseInt(process.env.CODELENS_DAEMON_IDLE_MS ?? "30000", 10);
+    const heartbeat = setInterval(() => daemonLock.heartbeat(), Number.isFinite(heartbeatMs) ? heartbeatMs : 5000);
+    const controller = createRuntimeController(repoRoot, {
+        rootsChecked: true,
+        autoIndexMode: normalizeAutoIndexMode(parsed.autoIndex, "missing"),
+    });
+    let socketServer = null;
+    async function cleanup() {
+        clearInterval(heartbeat);
+        try {
+            await socketServer?.close();
+        }
+        catch { /* ignore */ }
+        controller.close();
+        daemonLock.release();
+    }
+    function shutdown() {
+        void cleanup().finally(() => process.exit(0));
+    }
+    process.once("SIGTERM", shutdown);
+    process.once("SIGINT", shutdown);
+    process.once("exit", () => { daemonLock.release(); });
+    socketServer = await startDaemonSocketServer(daemonLock.paths, async (socket) => {
+        const server = createServer(controller.ctx, controller.beforeTool);
+        controller.bindServer(server);
+        const transport = new StdioServerTransport(socket, socket);
+        await server.connect(transport);
+    }, { idleMs: Number.isFinite(idleMs) ? idleMs : 30000, onIdle: shutdown });
+    await controller.settleRootAndTriggerAutoIndex();
+}
+export async function main() {
+    // CLI dispatch: if the first arg is a known subcommand (bare word like
+    // `install` or a flag-style one like `--print-config`/`--version`), run the
+    // CLI with the FULL arg list so --target/--command/--yes are preserved.
+    // Otherwise start the MCP stdio server.
+    const parsed = parseCwdArg(process.argv.slice(2));
+    const fullArgs = parsed.args;
+    const head = fullArgs[0];
+    if (head && CLI_COMMANDS.has(head)) {
+        const code = await cli(process.argv.slice(2));
+        process.exit(code);
+        return;
+    }
+    // Smoke mode: register tools against an in-memory context and print names.
+    if (process.argv.includes("--smoke")) {
+        const ctx = { coreDb: openMemoryDb(), ctxDb: openMemoryContextDb(), repoRoot: "/tmp" };
+        const server = createServer(ctx);
+        void server;
+        console.log(JSON.stringify({ ok: true, tools: TOOLS.map((t) => t.name) }));
+        return;
+    }
+    if (head === "--daemon") {
+        await startDaemon(parsed);
+        return;
+    }
+    await startProxyMcpServer(parsed);
+}
 function openRuntime(repoRoot) {
     let coreDb;
     try {

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package/build/src/upgrade.js

@@ -1,8 +1,11 @@
 import { spawnSync } from "node:child_process";
-import { existsSync, readFileSync } from "node:fs";
+import { existsSync, readdirSync, readFileSync } from "node:fs";
 import { homedir } from "node:os";
 import { join, dirname } from "node:path";
 import { fileURLToPath } from "node:url";
+import { openDb } from "./db/db.js";
+import { pruneIndexes } from "./index/ttl.js";
+import { shutdownAllDaemons } from "./runtime/daemon.js";
 import { VERSION } from "./version.js";
 /**
  * Upgrade check + perform (mirrors codegraph's `upgrade --check` / `upgrade`).
@@ -54,6 +57,35 @@ export async function checkUpgrade() {
     const behind = git(root, ["rev-list", "--count", `HEAD..origin/${branch}`]).stdout;
     return { upToDate: false, message: `codelens ${VERSION}: update available (${behind} commit(s) behind origin/${branch}). Run \`codelens upgrade\` to update.`, local, remote };
 }
+export function pruneInstalledIndexes(home = homedir()) {
+    const dir = join(home, ".codelens", "indexes");
+    const result = { scannedDbs: 0, deletedIndexes: 0, failedDbs: 0 };
+    let entries;
+    try {
+        entries = readdirSync(dir).filter((entry) => entry.endsWith(".db"));
+    }
+    catch {
+        return result;
+    }
+    for (const entry of entries) {
+        result.scannedDbs++;
+        let db = null;
+        try {
+            db = openDb(join(dir, entry));
+            result.deletedIndexes += pruneIndexes(db).deletedIndexes.length;
+        }
+        catch {
+            result.failedDbs++;
+        }
+        finally {
+            try {
+                db?.close();
+            }
+            catch { /* ignore */ }
+        }
+    }
+    return result;
+}
 /** Read the version from the (freshly pulled/built) app package.json. */
 export function readRootVersion(root) {
     try {
@@ -90,6 +122,8 @@ export async function performUpgrade(_version) {
         return { ok: false, message: "could not locate the install dir; re-run the installer script." };
     if (!existsSync(join(root, ".git")))
         return { ok: false, message: "not a git checkout; re-run the installer script to update." };
+    const daemonCleanup = await shutdownAllDaemons();
+    const indexPrune = pruneInstalledIndexes();
     const branch = git(root, ["rev-parse", "--abbrev-ref", "HEAD"]).stdout || "main";
     const pull = git(root, ["pull", "--ff-only", "origin", branch]);
     if (!pull.ok)
@@ -105,9 +139,11 @@ export async function performUpgrade(_version) {
     const refreshNote = refresh.ok
         ? "Refreshed global agent config + routing."
         : `Could not auto-refresh agent config (${refresh.detail}); run \`codelens install --target all --yes\`.`;
+    const daemonNote = `Daemon cleanup: scanned ${daemonCleanup.scanned}, signaled ${daemonCleanup.signaled}, stopped ${daemonCleanup.stopped}, stale cleaned ${daemonCleanup.staleCleaned}${daemonCleanup.failed ? `, failed ${daemonCleanup.failed}` : ""}.`;
+    const pruneNote = `Index prune: scanned ${indexPrune.scannedDbs} DBs, deleted ${indexPrune.deletedIndexes} expired indexes${indexPrune.failedDbs ? `, failed ${indexPrune.failedDbs} DBs` : ""}.`;
     return {
         ok: true,
-        message: `upgraded to ${newVersion} (pulled origin/${branch}, rebuilt). ${refreshNote} Restart your agent(s) to pick up the new build (Cursor's global config attaches to the workspace via \${workspaceFolder}).`,
+        message: `upgraded to ${newVersion} (pulled origin/${branch}, rebuilt). ${daemonNote} ${pruneNote} ${refreshNote} Restart your agent(s) to pick up the new build (Cursor's global config attaches to the workspace via \${workspaceFolder}).`,
     };
 }
 //# sourceMappingURL=upgrade.js.map

package/build/src/upgrade.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@fodx/codelens",
-  "version": "2.2.2",
+  "version": "2.3.0",
   "description": "Local, branch-aware code search & relation graph. SQLite FTS5 + tree-sitter symbols + source-graph edges, exposed as an MCP server and CLI. No chat LLM required.",
   "license": "MIT",
   "type": "module",