@fodx/codelens 2.2.0 → 2.2.2

package/build/src/tools/explore.js

@@ -1,5 +1,5 @@
-import { getActiveIndexId, getIndex } from "../index/manager.js";
-import { getPendingPaths } from "../index/staleness.js";
+import { requireActiveIndex } from "../index/manager.js";
+import { markStale } from "../index/staleness.js";
 import { neighbors } from "../graph/query.js";
 import { ctxSearch } from "./search.js";
 const DEFAULT_LIMIT = 8;
@@ -41,24 +41,20 @@ function toExploreItem(hit, signature) {
     return item;
 }
 export function ctxExplore(db, query, opts) {
-    const indexId = getActiveIndexId();
-    if (!indexId || !getIndex(db, indexId))
-        throw new Error("no active index — call cl_refresh first");
+    const indexId = requireActiveIndex(db);
     const search = ctxSearch(db, query, {
         limit: opts?.limit ?? DEFAULT_LIMIT,
         cursor: opts?.cursor,
         contentType: opts?.contentType,
         snippet: opts?.snippet ?? "compact",
     });
-    const pendingPaths = getPendingPaths(indexId);
     const byFile = new Map();
     const seenSignatureByFile = new Map();
     for (const hit of search.results) {
         let file = byFile.get(hit.path);
         if (!file) {
             file = { path: hit.path, results: [] };
-            if (pendingPaths.has(hit.path))
-                file.stale = true;
+            markStale(file, indexId, hit.path);
             byFile.set(hit.path, file);
         }
         const signature = signatureFor(db, indexId, hit.handle);
@@ -110,8 +106,7 @@ export function ctxExplore(db, query, opts) {
                     continue;
                 seenRelated.add(key);
                 const item = { sourcePath, ...n };
-                if (pendingPaths.has(n.path))
-                    item.stale = true;
+                markStale(item, indexId, n.path);
                 related.push(item);
             }
         }

package/build/src/tools/explore.js.map

@@ -1 +1 @@
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package/build/src/tools/impact.js

@@ -1,5 +1,5 @@
-import { getActiveIndexId, getIndex } from "../index/manager.js";
-import { getPendingPaths } from "../index/staleness.js";
+import { requireActiveIndex } from "../index/manager.js";
+import { freshnessFromPending, isStalePath, markStale } from "../index/staleness.js";
 import { neighbors, testsFor } from "../graph/query.js";
 const DEFAULT_DEPTH = 2;
 const MAX_DEPTH = 3;
@@ -23,8 +23,7 @@ function staleAware(indexId, n, provenance = "graph") {
         provenance,
         confidenceLabel: confidenceLabel(n.confidence),
     };
-    if (getPendingPaths(indexId).has(n.path))
-        item.stale = true;
+    markStale(item, indexId, n.path);
     return item;
 }
 function isTestPath(path) {
@@ -88,20 +87,17 @@ function targetFrom(row, path, stale) {
     return target;
 }
 export function ctxImpact(db, opts) {
-    const indexId = getActiveIndexId();
-    if (!indexId || !getIndex(db, indexId))
-        throw new Error("no active index — call cl_refresh first");
+    const indexId = requireActiveIndex(db);
     if (!opts.symbol && !opts.path)
         throw new Error("cl_impact requires symbol or path");
     const depth = clampDepth(opts.depth);
     const includeTests = opts.includeTests ?? true;
-    const pendingPaths = getPendingPaths(indexId);
     let targetPath = opts.path?.replace(/^\.?\//, "");
     let targetSymbol;
     if (opts.symbol) {
         const matches = resolveSymbol(db, indexId, opts.symbol, targetPath);
         if (matches.length > 1 && !targetPath) {
-            const candidates = matches.map((m) => candidateFrom(m, pendingPaths.has(m.path)));
+            const candidates = matches.map((m) => candidateFrom(m, isStalePath(indexId, m.path)));
             const out = {
                 indexId,
                 candidates,
@@ -111,10 +107,8 @@ export function ctxImpact(db, opts) {
                 affectedTests: [],
                 depth,
                 confidenceNote: "Multiple symbols matched; pass both symbol and path to disambiguate before trusting impact results.",
-                freshness: pendingPaths.size > 0 ? "partial" : "fresh",
+                ...freshnessFromPending(indexId),
             };
-            if (pendingPaths.size > 0)
-                out.pendingFiles = pendingPaths.size;
             return out;
         }
         targetSymbol = matches[0];
@@ -128,10 +122,8 @@ export function ctxImpact(db, opts) {
                 affectedTests: [],
                 depth,
                 confidenceNote: "No indexed symbol matched; try cl_search or pass a repo-relative path.",
-                freshness: pendingPaths.size > 0 ? "partial" : "fresh",
+                ...freshnessFromPending(indexId),
             };
-            if (pendingPaths.size > 0)
-                out.pendingFiles = pendingPaths.size;
             return out;
         }
         targetPath = targetSymbol.path;
@@ -154,7 +146,7 @@ export function ctxImpact(db, opts) {
         : [];
     const out = {
         indexId,
-        target: targetFrom(targetSymbol, targetPath, pendingPaths.has(targetPath)),
+        target: targetFrom(targetSymbol, targetPath, isStalePath(indexId, targetPath)),
         callers,
         callees,
         affectedFiles,
@@ -167,10 +159,8 @@ export function ctxImpact(db, opts) {
             affectedTests: affectedTests.length,
         },
         confidenceNote: "Impact is derived from indexed file/symbol edges. calls/references are currently strongest for TS/JS; path-heuristic tests are conservative and lower-confidence; sparse languages may need cl_search/cl_expand follow-up.",
-        freshness: pendingPaths.size > 0 ? "partial" : "fresh",
+        ...freshnessFromPending(indexId),
     };
-    if (pendingPaths.size > 0)
-        out.pendingFiles = pendingPaths.size;
     return out;
 }
 //# sourceMappingURL=impact.js.map

package/build/src/tools/impact.js.map

@@ -1 +1 @@
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+{"version":3,"file":"impact.js","sourceRoot":"","sources":["../../../src/tools/impact.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,kBAAkB,EAAE,MAAM,qBAAqB,CAAC;AACzD,OAAO,EAAE,oBAAoB,EAAE,WAAW,EAAE,SAAS,EAAE,MAAM,uBAAuB,CAAC;AACrF,OAAO,EAAE,SAAS,EAAE,QAAQ,EAAsB,MAAM,mBAAmB,CAAC;AA4D5E,MAAM,aAAa,GAAG,CAAC,CAAC;AACxB,MAAM,SAAS,GAAG,CAAC,CAAC;AAEpB,SAAS,UAAU,CAAC,KAAc;IAChC,OAAO,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,KAAK,IAAI,aAAa,CAAC,EAAE,SAAS,CAAC,CAAC;AAClE,CAAC;AAED,SAAS,eAAe,CAAC,UAAkB;IACzC,IAAI,UAAU,IAAI,GAAG;QAAE,OAAO,MAAM,CAAC;IACrC,IAAI,UAAU,IAAI,GAAG;QAAE,OAAO,QAAQ,CAAC;IACvC,OAAO,KAAK,CAAC;AACf,CAAC;AAED,SAAS,UAAU,CAAC,OAAe,EAAE,CAAgB,EAAE,aAAyC,OAAO;IACrG,MAAM,IAAI,GAAiB;QACzB,MAAM,EAAE,OAAO,CAAC,CAAC,IAAI,EAAE;QACvB,IAAI,EAAE,CAAC,CAAC,IAAI;QACZ,QAAQ,EAAE,CAAC,CAAC,QAAQ;QACpB,IAAI,EAAE,CAAC,CAAC,IAAI;QACZ,UAAU,EAAE,CAAC,CAAC,UAAU;QACxB,UAAU;QACV,eAAe,EAAE,eAAe,CAAC,CAAC,CAAC,UAAU,CAAC;KAC/C,CAAC;IACF,SAAS,CAAC,IAAI,EAAE,OAAO,EAAE,CAAC,CAAC,IAAI,CAAC,CAAC;IACjC,OAAO,IAAI,CAAC;AACd,CAAC;AAED,SAAS,UAAU,CAAC,IAAY;IAC9B,OAAO,4BAA4B,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,8BAA8B,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;AAC9F,CAAC;AAED,SAAS,IAAI,CAAC,OAAuB;IACnC,MAAM,KAAK,GAAG,IAAI,GAAG,EAAwB,CAAC;IAC9C,KAAK,MAAM,CAAC,IAAI,OAAO,EAAE,CAAC;QACxB,MAAM,GAAG,GAAG,GAAG,CAAC,CAAC,IAAI,KAAK,CAAC,CAAC,QAAQ,EAAE,CAAC;QACvC,MAAM,QAAQ,GAAG,KAAK,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;QAChC,IAAI,CAAC,QAAQ,IAAI,CAAC,CAAC,IAAI,GAAG,QAAQ,CAAC,IAAI,IAAI,CAAC,CAAC,CAAC,IAAI,KAAK,QAAQ,CAAC,IAAI,IAAI,CAAC,CAAC,UAAU,GAAG,QAAQ,CAAC,UAAU,CAAC,EAAE,CAAC;YAC5G,KAAK,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,CAAC,CAAC;QACpB,CAAC;IACH,CAAC;IACD,OAAO,CAAC,GAAG,KAAK,CAAC,MAAM,EAAE,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,GAAG,CAAC,CAAC,IAAI,IAAI,CAAC,CAAC,UAAU,GAAG,CAAC,CAAC,UAAU,IAAI,CAAC,CAAC,QAAQ,CAAC,aAAa,CAAC,CAAC,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC;AACpK,CAAC;AAED,SAAS,aAAa,CAAC,EAAqB,EAAE,OAAe,EAAE,MAAc,EAAE,IAAa;IAC1F,MAAM,UAAU,GAAG,IAAI,CAAC,CAAC,CAAC,eAAe,CAAC,CAAC,CAAC,EAAE,CAAC;IAC/C,MAAM,MAAM,GAAc,IAAI,CAAC,CAAC,CAAC,CAAC,OAAO,EAAE,MAAM,EAAE,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,OAAO,EAAE,MAAM,CAAC,CAAC;IAC7E,MAAM,KAAK,GAAG,EAAE,CAAC,OAAO,CACtB;mDAC+C,UAAU;gDACb,CAC7C,CAAC,GAAG,CAAC,GAAG,MAAM,CAAgB,CAAC;IAChC,IAAI,KAAK,CAAC,MAAM,GAAG,CAAC;QAAE,OAAO,KAAK,CAAC;IACnC,MAAM,UAAU,GAAc,IAAI,CAAC,CAAC,CAAC,CAAC,OAAO,EAAE,IAAI,MAAM,GAAG,EAAE,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,OAAO,EAAE,IAAI,MAAM,GAAG,CAAC,CAAC;IAC/F,OAAO,EAAE,CAAC,OAAO,CACf;sDACkD,UAAU;gDAChB,CAC7C,CAAC,GAAG,CAAC,GAAG,UAAU,CAAgB,CAAC;AACtC,CAAC;AAED,SAAS,aAAa,CAAC,GAAc,EAAE,KAAc;IACnD,MAAM,CAAC,GAAoB;QACzB,EAAE,EAAE,GAAG,CAAC,EAAE;QACV,QAAQ,EAAE,GAAG,CAAC,EAAE;QAChB,IAAI,EAAE,GAAG,CAAC,IAAI;QACd,MAAM,EAAE,GAAG,CAAC,IAAI;QAChB,IAAI,EAAE,GAAG,CAAC,IAAI;QACd,SAAS,EAAE,GAAG,CAAC,SAAS;QACxB,KAAK,EAAE,GAAG,GAAG,CAAC,UAAU,IAAI,GAAG,CAAC,QAAQ,EAAE;KAC3C,CAAC;IACF,IAAI,KAAK;QAAE,CAAC,CAAC,KAAK,GAAG,IAAI,CAAC;IAC1B,OAAO,CAAC,CAAC;AACX,CAAC;AAED,SAAS,UAAU,CAAC,GAA0B,EAAE,IAAY,EAAE,KAAc;IAC1E,IAAI,CAAC,GAAG,EAAE,CAAC;QACT,MAAM,MAAM,GAAiB,EAAE,IAAI,EAAE,CAAC;QACtC,IAAI,KAAK;YAAE,MAAM,CAAC,KAAK,GAAG,IAAI,CAAC;QAC/B,OAAO,MAAM,CAAC;IAChB,CAAC;IACD,MAAM,MAAM,GAAiB;QAC3B,IAAI,EAAE,GAAG,CAAC,IAAI;QACd,QAAQ,EAAE,GAAG,CAAC,EAAE;QAChB,MAAM,EAAE,GAAG,CAAC,IAAI;QAChB,IAAI,EAAE,GAAG,CAAC,IAAI;QACd,SAAS,EAAE,GAAG,CAAC,SAAS;QACxB,KAAK,EAAE,GAAG,GAAG,CAAC,UAAU,IAAI,GAAG,CAAC,QAAQ,EAAE;KAC3C,CAAC;IACF,IAAI,KAAK;QAAE,MAAM,CAAC,KAAK,GAAG,IAAI,CAAC;IAC/B,OAAO,MAAM,CAAC;AAChB,CAAC;AAED,MAAM,UAAU,SAAS,CACvB,EAAqB,EACrB,IAAgF;IAEhF,MAAM,OAAO,GAAG,kBAAkB,CAAC,EAAE,CAAC,CAAC;IACvC,IAAI,CAAC,IAAI,CAAC,MAAM,IAAI,CAAC,IAAI,CAAC,IAAI;QAAE,MAAM,IAAI,KAAK,CAAC,mCAAmC,CAAC,CAAC;IAErF,MAAM,KAAK,GAAG,UAAU,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IACrC,MAAM,YAAY,GAAG,IAAI,CAAC,YAAY,IAAI,IAAI,CAAC;IAC/C,IAAI,UAAU,GAAG,IAAI,CAAC,IAAI,EAAE,OAAO,CAAC,QAAQ,EAAE,EAAE,CAAC,CAAC;IAClD,IAAI,YAAmC,CAAC;IAExC,IAAI,IAAI,CAAC,MAAM,EAAE,CAAC;QAChB,MAAM,OAAO,GAAG,aAAa,CAAC,EAAE,EAAE,OAAO,EAAE,IAAI,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC;QACpE,IAAI,OAAO,CAAC,MAAM,GAAG,CAAC,IAAI,CAAC,UAAU,EAAE,CAAC;YACtC,MAAM,UAAU,GAAG,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,aAAa,CAAC,CAAC,EAAE,WAAW,CAAC,OAAO,EAAE,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;YACtF,MAAM,GAAG,GAAiB;gBACxB,OAAO;gBACP,UAAU;gBACV,OAAO,EAAE,EAAE;gBACX,OAAO,EAAE,EAAE;gBACX,aAAa,EAAE,EAAE;gBACjB,aAAa,EAAE,EAAE;gBACjB,KAAK;gBACL,cAAc,EAAE,qGAAqG;gBACrH,GAAG,oBAAoB,CAAC,OAAO,CAAC;aACjC,CAAC;YACF,OAAO,GAAG,CAAC;QACb,CAAC;QACD,YAAY,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;QAC1B,IAAI,CAAC,YAAY,EAAE,CAAC;YAClB,MAAM,GAAG,GAAiB;gBACxB,OAAO;gBACP,UAAU,EAAE,EAAE;gBACd,OAAO,EAAE,EAAE;gBACX,OAAO,EAAE,EAAE;gBACX,aAAa,EAAE,EAAE;gBACjB,aAAa,EAAE,EAAE;gBACjB,KAAK;gBACL,cAAc,EAAE,wEAAwE;gBACxF,GAAG,oBAAoB,CAAC,OAAO,CAAC;aACjC,CAAC;YACF,OAAO,GAAG,CAAC;QACb,CAAC;QACD,UAAU,GAAG,YAAY,CAAC,IAAI,CAAC;IACjC,CAAC;IACD,IAAI,CAAC,UAAU;QAAE,MAAM,IAAI,KAAK,CAAC,2CAA2C,CAAC,CAAC;IAE9E,MAAM,OAAO,GAAG,IAAI,CAAC,SAAS,CAAC,EAAE,EAAE,OAAO,EAAE,UAAU,EAAE,EAAE,KAAK,EAAE,CAAC,OAAO,EAAE,YAAY,EAAE,SAAS,EAAE,aAAa,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package/build/src/tools/map.js

@@ -1,5 +1,5 @@
-import { getActiveIndexId, getIndex } from "../index/manager.js";
-import { getPendingPaths } from "../index/staleness.js";
+import { requireActiveIndex } from "../index/manager.js";
+import { freshnessFromPending, markStale } from "../index/staleness.js";
 const DEFAULT_FILE_LIMIT = 50;
 const MAX_FILE_LIMIT = 200;
 /**
@@ -7,9 +7,7 @@ const MAX_FILE_LIMIT = 200;
  * Defaults to exported symbols only; pass `all: true` for everything.
  */
 export function ctxMap(db, opts) {
-    const indexId = getActiveIndexId();
-    if (!indexId || !getIndex(db, indexId))
-        throw new Error("no active index — call cl_refresh first");
+    const indexId = requireActiveIndex(db);
     const fileLimit = Math.min(Math.max(1, opts?.limit ?? DEFAULT_FILE_LIMIT), MAX_FILE_LIMIT);
     const prefix = (opts?.path ?? "").replace(/^\.?\//, "").replace(/\/$/, "");
     const exportedClause = opts?.all ? "" : " AND exported = 1";
@@ -45,16 +43,12 @@ export function ctxMap(db, opts) {
     // Were there more files than the cap allowed?
     const distinctPaths = new Set(rows.map((r) => r.path));
     const truncated = distinctPaths.size > byFile.size;
-    const pendingPaths = getPendingPaths(indexId);
     const files = [...byFile.entries()].map(([path, symbols]) => {
         const item = { path, symbols };
-        if (pendingPaths.has(path))
-            item.stale = true;
+        markStale(item, indexId, path);
         return item;
     });
-    const out = { indexId, files, fileCount: files.length, truncated, freshness: pendingPaths.size > 0 ? "partial" : "fresh" };
-    if (pendingPaths.size > 0)
-        out.pendingFiles = pendingPaths.size;
+    const out = { indexId, files, fileCount: files.length, truncated, ...freshnessFromPending(indexId) };
     return out;
 }
 //# sourceMappingURL=map.js.map

package/build/src/tools/map.js.map

@@ -1 +1 @@
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package/build/src/tools/refresh.js

@@ -1,5 +1,22 @@
 import { buildIndex } from "../index/indexer.js";
+import { computeIndexId } from "../index/identity.js";
+import { getAutoIndexStatus } from "../index/autoindex.js";
 export function ctxRefresh(db, scope) {
+    const indexId = computeIndexId(scope);
+    const indexing = getAutoIndexStatus(indexId);
+    if (indexing) {
+        return {
+            indexId,
+            branch: scope.branch,
+            headSha: scope.headSha,
+            indexedFiles: 0,
+            totalChunks: 0,
+            skipped: 0,
+            status: "indexing",
+            indexingStartedAt: indexing.startedAt,
+            indexingAgeMs: indexing.ageMs,
+        };
+    }
     const r = buildIndex(db, scope);
     return {
         indexId: r.indexId,

package/build/src/tools/refresh.js.map

@@ -1 +1 @@
-{"version":3,"file":"refresh.js","sourceRoot":"","sources":["../../../src/tools/refresh.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,UAAU,EAAE,MAAM,qBAAqB,CAAC;AAmBjD,MAAM,UAAU,UAAU,CAAC,EAAqB,EAAE,KAAe;IAC/D,MAAM,CAAC,GAAG,UAAU,CAAC,EAAE,EAAE,KAAK,CAAC,CAAC;IAChC,OAAO;QACL,OAAO,EAAE,CAAC,CAAC,OAAO;QAClB,MAAM,EAAE,KAAK,CAAC,MAAM;QACpB,OAAO,EAAE,KAAK,CAAC,OAAO;QACtB,YAAY,EAAE,CAAC,CAAC,YAAY;QAC5B,WAAW,EAAE,CAAC,CAAC,WAAW;QAC1B,OAAO,EAAE,CAAC,CAAC,OAAO;QAClB,MAAM,EAAE,OAAO;KAChB,CAAC;AACJ,CAAC"}
+{"version":3,"file":"refresh.js","sourceRoot":"","sources":["../../../src/tools/refresh.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,UAAU,EAAE,MAAM,qBAAqB,CAAC;AACjD,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,kBAAkB,EAAE,MAAM,uBAAuB,CAAC;AAqB3D,MAAM,UAAU,UAAU,CAAC,EAAqB,EAAE,KAAe;IAC/D,MAAM,OAAO,GAAG,cAAc,CAAC,KAAK,CAAC,CAAC;IACtC,MAAM,QAAQ,GAAG,kBAAkB,CAAC,OAAO,CAAC,CAAC;IAC7C,IAAI,QAAQ,EAAE,CAAC;QACb,OAAO;YACL,OAAO;YACP,MAAM,EAAE,KAAK,CAAC,MAAM;YACpB,OAAO,EAAE,KAAK,CAAC,OAAO;YACtB,YAAY,EAAE,CAAC;YACf,WAAW,EAAE,CAAC;YACd,OAAO,EAAE,CAAC;YACV,MAAM,EAAE,UAAU;YAClB,iBAAiB,EAAE,QAAQ,CAAC,SAAS;YACrC,aAAa,EAAE,QAAQ,CAAC,KAAK;SAC9B,CAAC;IACJ,CAAC;IACD,MAAM,CAAC,GAAG,UAAU,CAAC,EAAE,EAAE,KAAK,CAAC,CAAC;IAChC,OAAO;QACL,OAAO,EAAE,CAAC,CAAC,OAAO;QAClB,MAAM,EAAE,KAAK,CAAC,MAAM;QACpB,OAAO,EAAE,KAAK,CAAC,OAAO;QACtB,YAAY,EAAE,CAAC,CAAC,YAAY;QAC5B,WAAW,EAAE,CAAC,CAAC,WAAW;QAC1B,OAAO,EAAE,CAAC,CAAC,OAAO;QAClB,MAAM,EAAE,OAAO;KAChB,CAAC;AACJ,CAAC"}

package/build/src/tools/registry.js

@@ -16,18 +16,38 @@ import { detectScope } from "../git/scope.js";
 import { getOrCreateIndex, getActiveIndexId } from "../index/manager.js";
 import { buildIndex } from "../index/indexer.js";
 import { ensureFreshIndex } from "../index/reindex.js";
+import { activatePersistentIndexIfReady, getAutoIndexStatus } from "../index/autoindex.js";
+import { computeIndexId } from "../index/identity.js";
 function withScope(ctx) {
     return detectScope(ctx.repoRoot);
 }
-/** Ensure an active index exists for the current repo scope before query tools. */
+/**
+ * Ensure an active index exists for the current repo scope before query tools.
+ *
+ * Side effect: when no active index exists and no background auto-index is
+ * running, this will trigger a foreground `buildIndex(...)`. So a *query* tool
+ * (cl_search, cl_explore, …) may build the index on first call. This is
+ * intentional (lazy bootstrap beats forcing every caller to cl_refresh first),
+ * but callers wanting a fast failure or a non-mutating check should call
+ * `cl_current` instead. Background auto-index activation is preferred when
+ * a completed auto-index is available.
+ */
 function ensureActive(ctx) {
     const scope = withScope(ctx);
     if (!scope)
         throw new Error("not inside a git repo (or plain dir support not enabled)");
-    // Build the first index eagerly, then use budget-bounded reconciliation on
-    // subsequent query tools so out-of-band edits are not silently missed.
+    // Activate a completed background auto-index if one exists. If auto-index is
+    // still running, do not duplicate a blocking foreground build; ask the agent to
+    // retry shortly or call cl_current for progress.
     if (!getActiveIndexId()) {
-        buildIndex(ctx.coreDb, scope);
+        const activated = activatePersistentIndexIfReady(ctx.coreDb, scope);
+        if (!activated) {
+            const indexId = computeIndexId(scope);
+            const indexing = getAutoIndexStatus(indexId);
+            if (indexing)
+                throw new Error(`indexing in progress since ${new Date(indexing.startedAt).toISOString()} (${Math.round(indexing.ageMs / 1000)}s ago); retry shortly or call cl_current`);
+            buildIndex(ctx.coreDb, scope);
+        }
     }
     else {
         getOrCreateIndex(ctx.coreDb, scope);
@@ -38,13 +58,13 @@ function ensureActive(ctx) {
 export const TOOLS = [
     {
         name: "cl_current",
-        description: "Report current repo/branch/index status with freshness fields. Use first to check if an index is ready.\n\nRETURNS: {repo, branch, headSha, indexId, status, dirtyFiles, lastIndexedAt, inGitRepo}\n\nEXAMPLE: cl_current",
+        description: "Report current repo/branch/index status with freshness fields. Use first to check if an index is ready. If status is indexing, wait/retry shortly instead of refreshing immediately.\n\nRETURNS: {repo, branch, headSha, indexId, status, dirtyFiles, lastIndexedAt, indexingStartedAt?, indexingAgeMs?, inGitRepo}\n\nEXAMPLE: cl_current",
         schema: {},
         handler: (ctx) => ctxCurrent(ctx.coreDb, ctx.repoRoot),
     },
     {
         name: "cl_refresh",
-        description: "Create or update the current branch/worktree index. Scans files, indexes FTS, extracts symbols, builds graph.\n\nRETURNS: {indexId, branch, indexedFiles, totalChunks, skipped, status}\n\nEXAMPLE: cl_refresh",
+        description: "Create or update the current branch/worktree index. Scans files, indexes FTS, extracts symbols, builds graph. If background auto-index is already running, returns status:indexing instead of duplicating work.\n\nRETURNS: {indexId, branch, indexedFiles, totalChunks, skipped, status, indexingStartedAt?, indexingAgeMs?}\n\nEXAMPLE: cl_refresh",
         schema: {},
         handler: (ctx) => {
             const scope = withScope(ctx);

package/build/src/tools/registry.js.map

@@ -1 +1 @@
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package/build/src/tools/related.js

@@ -1,12 +1,9 @@
-import { getActiveIndexId, getIndex } from "../index/manager.js";
-import { getPendingPaths } from "../index/staleness.js";
+import { requireActiveIndex } from "../index/manager.js";
+import { freshnessFromPending, markStale } from "../index/staleness.js";
 import { neighbors as graphNeighbors, testsFor } from "../graph/query.js";
 export function ctxRelated(db, path, opts) {
-    const indexId = getActiveIndexId();
-    if (!indexId || !getIndex(db, indexId))
-        throw new Error("no active index — call cl_refresh first");
+    const indexId = requireActiveIndex(db);
     const ns = graphNeighbors(db, indexId, path, opts ?? {});
-    const pendingPaths = getPendingPaths(indexId);
     const results = ns.map((n) => {
         const item = {
             handle: `rel:${n.path}`,
@@ -15,34 +12,25 @@ export function ctxRelated(db, path, opts) {
             hops: n.hops,
             confidence: n.confidence,
         };
-        if (pendingPaths.has(n.path))
-            item.stale = true;
+        markStale(item, indexId, n.path);
         return item;
     });
-    const out = { indexId, results, freshness: pendingPaths.size > 0 ? "partial" : "fresh" };
-    if (pendingPaths.size > 0)
-        out.pendingFiles = pendingPaths.size;
+    const out = { indexId, results, ...freshnessFromPending(indexId) };
     return out;
 }
 /** cl_related variant: tests for a given source path. */
 export function ctxRelatedTests(db, sourcePath) {
-    const indexId = getActiveIndexId();
-    if (!indexId || !getIndex(db, indexId))
-        throw new Error("no active index — call cl_refresh first");
+    const indexId = requireActiveIndex(db);
     const ns = testsFor(db, indexId, sourcePath);
-    const pendingPaths = getPendingPaths(indexId);
     const out = {
         indexId,
         results: ns.map((n) => {
             const item = { handle: `rel:${n.path}`, path: n.path, edgeType: n.edgeType, hops: n.hops, confidence: n.confidence };
-            if (pendingPaths.has(n.path))
-                item.stale = true;
+            markStale(item, indexId, n.path);
             return item;
         }),
-        freshness: pendingPaths.size > 0 ? "partial" : "fresh",
+        ...freshnessFromPending(indexId),
     };
-    if (pendingPaths.size > 0)
-        out.pendingFiles = pendingPaths.size;
     return out;
 }
 //# sourceMappingURL=related.js.map

package/build/src/tools/related.js.map

@@ -1 +1 @@
-{"version":3,"file":"related.js","sourceRoot":"","sources":["../../../src/tools/related.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,gBAAgB,EAAE,QAAQ,EAAE,MAAM,qBAAqB,CAAC;AACjE,OAAO,EAAE,eAAe,EAAE,MAAM,uBAAuB,CAAC;AACxD,OAAO,EAAE,SAAS,IAAI,cAAc,EAAE,QAAQ,EAAsB,MAAM,mBAAmB,CAAC;AAwB9F,MAAM,UAAU,UAAU,CACxB,EAAqB,EACrB,IAAY,EACZ,IAA8E;IAE9E,MAAM,OAAO,GAAG,gBAAgB,EAAE,CAAC;IACnC,IAAI,CAAC,OAAO,IAAI,CAAC,QAAQ,CAAC,EAAE,EAAE,OAAO,CAAC;QAAE,MAAM,IAAI,KAAK,CAAC,yCAAyC,CAAC,CAAC;IACnG,MAAM,EAAE,GAAoB,cAAc,CAAC,EAAE,EAAE,OAAO,EAAE,IAAI,EAAE,IAAI,IAAI,EAAE,CAAC,CAAC;IAC1E,MAAM,YAAY,GAAG,eAAe,CAAC,OAAO,CAAC,CAAC;IAC9C,MAAM,OAAO,GAAoB,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE;QAC5C,MAAM,IAAI,GAAkB;YAC1B,MAAM,EAAE,OAAO,CAAC,CAAC,IAAI,EAAE;YACvB,IAAI,EAAE,CAAC,CAAC,IAAI;YACZ,QAAQ,EAAE,CAAC,CAAC,QAAQ;YACpB,IAAI,EAAE,CAAC,CAAC,IAAI;YACZ,UAAU,EAAE,CAAC,CAAC,UAAU;SACzB,CAAC;QACF,IAAI,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC;YAAE,IAAI,CAAC,KAAK,GAAG,IAAI,CAAC;QAChD,OAAO,IAAI,CAAC;IACd,CAAC,CAAC,CAAC;IACH,MAAM,GAAG,GAAkB,EAAE,OAAO,EAAE,OAAO,EAAE,SAAS,EAAE,YAAY,CAAC,IAAI,GAAG,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,OAAO,EAAE,CAAC;IACxG,IAAI,YAAY,CAAC,IAAI,GAAG,CAAC;QAAE,GAAG,CAAC,YAAY,GAAG,YAAY,CAAC,IAAI,CAAC;IAChE,OAAO,GAAG,CAAC;AACb,CAAC;AAED,yDAAyD;AACzD,MAAM,UAAU,eAAe,CAAC,EAAqB,EAAE,UAAkB;IACvE,MAAM,OAAO,GAAG,gBAAgB,EAAE,CAAC;IACnC,IAAI,CAAC,OAAO,IAAI,CAAC,QAAQ,CAAC,EAAE,EAAE,OAAO,CAAC;QAAE,MAAM,IAAI,KAAK,CAAC,yCAAyC,CAAC,CAAC;IACnG,MAAM,EAAE,GAAG,QAAQ,CAAC,EAAE,EAAE,OAAO,EAAE,UAAU,CAAC,CAAC;IAC7C,MAAM,YAAY,GAAG,eAAe,CAAC,OAAO,CAAC,CAAC;IAC9C,MAAM,GAAG,GAAkB;QACzB,OAAO;QACP,OAAO,EAAE,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE;YACpB,MAAM,IAAI,GAAkB,EAAE,MAAM,EAAE,OAAO,CAAC,CAAC,IAAI,EAAE,EAAE,IAAI,EAAE,CAAC,CAAC,IAAI,EAAE,QAAQ,EAAE,CAAC,CAAC,QAAQ,EAAE,IAAI,EAAE,CAAC,CAAC,IAAI,EAAE,UAAU,EAAE,CAAC,CAAC,UAAU,EAAE,CAAC;YACpI,IAAI,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC;gBAAE,IAAI,CAAC,KAAK,GAAG,IAAI,CAAC;YAChD,OAAO,IAAI,CAAC;QACd,CAAC,CAAC;QACF,SAAS,EAAE,YAAY,CAAC,IAAI,GAAG,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,OAAO;KACvD,CAAC;IACF,IAAI,YAAY,CAAC,IAAI,GAAG,CAAC;QAAE,GAAG,CAAC,YAAY,GAAG,YAAY,CAAC,IAAI,CAAC;IAChE,OAAO,GAAG,CAAC;AACb,CAAC"}
+{"version":3,"file":"related.js","sourceRoot":"","sources":["../../../src/tools/related.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,kBAAkB,EAAE,MAAM,qBAAqB,CAAC;AACzD,OAAO,EAAE,oBAAoB,EAAE,SAAS,EAAE,MAAM,uBAAuB,CAAC;AACxE,OAAO,EAAE,SAAS,IAAI,cAAc,EAAE,QAAQ,EAAsB,MAAM,mBAAmB,CAAC;AAwB9F,MAAM,UAAU,UAAU,CACxB,EAAqB,EACrB,IAAY,EACZ,IAA8E;IAE9E,MAAM,OAAO,GAAG,kBAAkB,CAAC,EAAE,CAAC,CAAC;IACvC,MAAM,EAAE,GAAoB,cAAc,CAAC,EAAE,EAAE,OAAO,EAAE,IAAI,EAAE,IAAI,IAAI,EAAE,CAAC,CAAC;IAC1E,MAAM,OAAO,GAAoB,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE;QAC5C,MAAM,IAAI,GAAkB;YAC1B,MAAM,EAAE,OAAO,CAAC,CAAC,IAAI,EAAE;YACvB,IAAI,EAAE,CAAC,CAAC,IAAI;YACZ,QAAQ,EAAE,CAAC,CAAC,QAAQ;YACpB,IAAI,EAAE,CAAC,CAAC,IAAI;YACZ,UAAU,EAAE,CAAC,CAAC,UAAU;SACzB,CAAC;QACF,SAAS,CAAC,IAAI,EAAE,OAAO,EAAE,CAAC,CAAC,IAAI,CAAC,CAAC;QACjC,OAAO,IAAI,CAAC;IACd,CAAC,CAAC,CAAC;IACH,MAAM,GAAG,GAAkB,EAAE,OAAO,EAAE,OAAO,EAAE,GAAG,oBAAoB,CAAC,OAAO,CAAC,EAAE,CAAC;IAClF,OAAO,GAAG,CAAC;AACb,CAAC;AAED,yDAAyD;AACzD,MAAM,UAAU,eAAe,CAAC,EAAqB,EAAE,UAAkB;IACvE,MAAM,OAAO,GAAG,kBAAkB,CAAC,EAAE,CAAC,CAAC;IACvC,MAAM,EAAE,GAAG,QAAQ,CAAC,EAAE,EAAE,OAAO,EAAE,UAAU,CAAC,CAAC;IAC7C,MAAM,GAAG,GAAkB;QACzB,OAAO;QACP,OAAO,EAAE,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE;YACpB,MAAM,IAAI,GAAkB,EAAE,MAAM,EAAE,OAAO,CAAC,CAAC,IAAI,EAAE,EAAE,IAAI,EAAE,CAAC,CAAC,IAAI,EAAE,QAAQ,EAAE,CAAC,CAAC,QAAQ,EAAE,IAAI,EAAE,CAAC,CAAC,IAAI,EAAE,UAAU,EAAE,CAAC,CAAC,UAAU,EAAE,CAAC;YACpI,SAAS,CAAC,IAAI,EAAE,OAAO,EAAE,CAAC,CAAC,IAAI,CAAC,CAAC;YACjC,OAAO,IAAI,CAAC;QACd,CAAC,CAAC;QACF,GAAG,oBAAoB,CAAC,OAAO,CAAC;KACjC,CAAC;IACF,OAAO,GAAG,CAAC;AACb,CAAC"}

package/build/src/tools/search.js

@@ -1,9 +1,9 @@
-import { getActiveIndexId, touchIndex, getIndex } from "../index/manager.js";
+import { getActiveIndexId, touchIndex, requireActiveIndex } from "../index/manager.js";
 import { extractSnippet, headlineSnippet } from "../search/snippet.js";
 import { rank, normalize } from "../search/rank.js";
 import { neighbors } from "../graph/query.js";
 import { ensureFreshIndex } from "../index/reindex.js";
-import { getPendingPaths } from "../index/staleness.js";
+import { getPendingPaths, markStale } from "../index/staleness.js";
 import { splitIdentifiers } from "../search/identifiers.js";
 import { queryTokens, quoteFtsTerm } from "../search/query.js";
 const DEFAULT_LIMIT = 5;
@@ -131,9 +131,7 @@ function prelude(db, opts) {
     return { freshness, pendingFiles };
 }
 export function ctxSearch(db, query, opts) {
-    const indexId = getActiveIndexId();
-    if (!indexId || !getIndex(db, indexId))
-        throw new Error("no active index — call cl_refresh first");
+    const indexId = requireActiveIndex(db);
     touchIndex(db, indexId);
     const { freshness, pendingFiles } = prelude(db, opts);
     const limit = opts?.limit ?? DEFAULT_LIMIT;
@@ -157,12 +155,12 @@ export function ctxSearch(db, query, opts) {
     const sigStmt = db.prepare(`SELECT name, kind, signature FROM symbols
      WHERE index_id = ? AND path = ? AND start_line <= ? AND end_line >= ?
      ORDER BY (end_line - start_line) ASC`);
-    const queryTerms = query.toLowerCase().split(/[^a-z0-9_]+/i).filter((t) => t.length > 1);
+    const queryTokensLower = query.toLowerCase().split(/[^a-z0-9_]+/i).filter((t) => t.length > 1);
     const headlineFor = (src) => {
         let sig = null;
         try {
             const syms = sigStmt.all(indexId, src.path, src.endLine, src.startLine);
-            const chosen = syms.find((s) => queryTerms.some((t) => s.name.toLowerCase().includes(t))) ?? syms[0];
+            const chosen = syms.find((s) => queryTokensLower.some((t) => s.name.toLowerCase().includes(t))) ?? syms[0];
             if (chosen)
                 sig = chosen.signature ?? `${chosen.kind} ${chosen.name}`;
         }
@@ -178,7 +176,6 @@ export function ctxSearch(db, query, opts) {
             case "full": return extractSnippet(src.content, query, 1500);
         }
     };
-    const pendingPaths = getPendingPaths(indexId);
     const results = page.map((r, i) => {
         const src = r.chunkId ? byChunk.get(r.chunkId) : undefined;
         const rankOffset = offset + i;
@@ -190,8 +187,7 @@ export function ctxSearch(db, query, opts) {
             why: r.why.join(","),
             preview: src ? renderPreview(src, rankOffset) : "",
         };
-        if (pendingPaths.has(r.path))
-            item.stale = true;
+        markStale(item, indexId, r.path);
         return item;
     });
     const nextCursor = hasMore && results.length > 0 ? encodeCursor(offset + results.length, results[results.length - 1].handle || `${offset}`) : null;

package/build/src/tools/search.js.map

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package/build/src/util/id.js

@@ -0,0 +1,15 @@
+import { randomUUID } from "node:crypto";
+/**
+ * Prefixed UUID generator for indexed-row ids (Step 24 / DRY refactor 1e).
+ *
+ * Centralizes the `prefix + randomUUID()` convention so the id-prefix strings
+ * (`file_`, `sym_`, `chk_`, `edge_`) have a single source. Returns the same
+ * string shape the inline concatenations produced — byte-identical ids.
+ *
+ * Note: lease-ownership ids (`own_` in index/queue.ts) are a different domain
+ * (lease-scoped, not indexed rows) and intentionally stay inline there.
+ */
+export function id(prefix) {
+    return prefix + randomUUID();
+}
+//# sourceMappingURL=id.js.map

package/build/src/util/id.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"id.js","sourceRoot":"","sources":["../../../src/util/id.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,aAAa,CAAC;AAEzC;;;;;;;;;GASG;AACH,MAAM,UAAU,EAAE,CAAC,MAAc;IAC/B,OAAO,MAAM,GAAG,UAAU,EAAE,CAAC;AAC/B,CAAC"}

package/docs/agent-guide.md

@@ -50,7 +50,7 @@ End-to-end workflow for a coding agent using codelens.
 ## Tool choice
 
 - Use `cl_explore` for broad questions: "how does X work?", "show the flow around Y", or surveying an unfamiliar area. It combines search, compact source previews, and relationships in one call.
-- Use `cl_search` when you only need ranked handles/locations.
+- Use `cl_search` when you need ranked handles/locations.
 - Use `cl_related` to expand from a known file.
 - Use `cl_impact` before editing shared code to see callers/callees/affected tests.
 - Use `cl_expand` (or raw read) for exact current file content before editing.