@fnndsc/salsa 3.12.1 → 3.13.0

package/dist/dag/feedJoins.js

@@ -55,8 +55,12 @@ async function nodeJoins_resolve(id) {
         cumin_1.errorStack.stack_push("warning", `Could not fetch instance ${id} to resolve join edges; will retry on next resolve.`);
         return;
     }
-    const page = await handle.parametersPage_get({ limit: 100, offset: 0 });
-    const param = page.data.find((p) => p.param_name === 'plugininstances');
+    // Every parameter, not the first hundred: `plugininstances` is where a ts
+    // node's join edges live, and a node whose parameters run past a page
+    // would silently lose its edges — a graph drawn short with nothing said
+    // (#401).
+    const parameters = await (0, cumin_1.listPages_drain)((offset, limit) => handle.parametersPage_get({ limit, offset }));
+    const param = parameters.find((p) => p.param_name === 'plugininstances');
     // Overlay = the join's sources minus its anchor parent (which is also in the list).
     const sources = param ? joinIDs_parse(param.value) : [];
     const overlay = sources.filter((n) => n !== inst.parentID);

package/dist/dag/feedJoins.js.map

@@ -1 +1 @@
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+{"version":3,"file":"feedJoins.js","sourceRoot":"","sources":["../../src/dag/feedJoins.ts"],"names":[],"mappings":";;AAkDA,8CAiCC;AAQD,4CAQC;AAUD,0CAKC;AAlHD;;;;;;;;;;;;;GAaG;AACH,yCAWuB;AAEvB,sFAAsF;AACtF,MAAM,eAAe,GAAW,kBAAkB,CAAC;AAEnD,6FAA6F;AAC7F,SAAS,WAAW,CAAC,IAAkB;IACrC,IAAI,IAAI,CAAC,UAAU;QAAE,OAAO,IAAI,CAAC,UAAU,KAAK,IAAI,CAAC;IACrD,OAAO,eAAe,CAAC,IAAI,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;AAC/C,CAAC;AAED,4EAA4E;AAC5E,SAAS,aAAa,CAAC,KAAc;IACnC,OAAO,MAAM,CAAC,KAAK,IAAI,EAAE,CAAC;SACvB,KAAK,CAAC,GAAG,CAAC;SACV,GAAG,CAAC,CAAC,CAAS,EAAU,EAAE,CAAC,QAAQ,CAAC,CAAC,CAAC,IAAI,EAAE,EAAE,EAAE,CAAC,CAAC;SAClD,MAAM,CAAC,CAAC,CAAS,EAAW,EAAE,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC;AACtD,CAAC;AAED;;;;;GAKG;AACI,KAAK,UAAU,iBAAiB,CAAC,EAAU;IAChD,MAAM,KAAK,GAAc,IAAA,qBAAa,GAAE,CAAC;IACzC,MAAM,IAAI,GAA6B,KAAK,CAAC,YAAY,CAAC,EAAE,CAAC,CAAC;IAC9D,IAAI,CAAC,IAAI,IAAI,CAAC,WAAW,CAAC,IAAI,CAAC,IAAI,IAAI,CAAC,aAAa,KAAK,SAAS;QAAE,OAAO;IAE5E,MAAM,MAAM,GAAG,MAAM,uBAAe,CAAC,UAAU,EAAE,CAAC;IAClD,IAAI,CAAC,MAAM;QAAE,OAAO;IAEpB,MAAM,MAAM,GAAgC,MAAM,IAAA,0BAAkB,EAAC,MAAM,EAAE,EAAE,CAAC,CAAC;IACjF,IAAI,CAAC,MAAM,EAAE,CAAC;QACZ,sEAAsE;QACtE,kEAAkE;QAClE,yEAAyE;QACzE,kBAAU,CAAC,UAAU,CAAC,SAAS,EAAE,4BAA4B,EAAE,qDAAqD,CAAC,CAAC;QACtH,OAAO;IACT,CAAC;IAED,0EAA0E;IAC1E,sEAAsE;IACtE,wEAAwE;IACxE,UAAU;IACV,MAAM,UAAU,GAA4B,MAAM,IAAA,uBAAe,EAC/D,CAAC,MAAc,EAAE,KAAa,EAA4C,EAAE,CAC1E,MAAM,CAAC,kBAAkB,CAAC,EAAE,KAAK,EAAE,MAAM,EAAE,CAAC,CAC/C,CAAC;IACF,MAAM,KAAK,GAAsC,UAAU,CAAC,IAAI,CAC9D,CAAC,CAAwB,EAAW,EAAE,CAAC,CAAC,CAAC,UAAU,KAAK,iBAAiB,CAC1E,CAAC;IAEF,oFAAoF;IACpF,MAAM,OAAO,GAAa,KAAK,CAAC,CAAC,CAAC,aAAa,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;IAClE,MAAM,OAAO,GAAa,OAAO,CAAC,MAAM,CAAC,CAAC,CAAS,EAAW,EAAE,CAAC,CAAC,KAAK,IAAI,CAAC,QAAQ,CAAC,CAAC;IACtF,KAAK,CAAC,kBAAkB,CAAC,EAAE,EAAE,OAAO,CAAC,CAAC;AACxC,CAAC;AAED;;;;;GAKG;AACI,KAAK,UAAU,gBAAgB,CAAC,MAAc;IACnD,MAAM,KAAK,GAAc,IAAA,qBAAa,GAAE,CAAC;IACzC,KAAK,MAAM,EAAE,IAAI,KAAK,CAAC,mBAAmB,CAAC,MAAM,CAAC,EAAE,CAAC;QACnD,MAAM,IAAI,GAA6B,KAAK,CAAC,YAAY,CAAC,EAAE,CAAC,CAAC;QAC9D,IAAI,IAAI,IAAI,WAAW,CAAC,IAAI,CAAC,IAAI,IAAI,CAAC,aAAa,KAAK,SAAS,EAAE,CAAC;YAClE,MAAM,iBAAiB,CAAC,EAAE,CAAC,CAAC;QAC9B,CAAC;IACH,CAAC;AACH,CAAC;AAED;;;;;;;GAOG;AACI,KAAK,UAAU,eAAe;IACnC,MAAM,KAAK,GAAc,IAAA,qBAAa,GAAE,CAAC;IACzC,KAAK,MAAM,MAAM,IAAI,KAAK,CAAC,WAAW,EAAE,EAAE,CAAC;QACzC,MAAM,gBAAgB,CAAC,MAAM,CAAC,CAAC;IACjC,CAAC;AACH,CAAC"}

package/dist/files/index.d.ts

@@ -121,6 +121,47 @@ export declare function files_list(options: ListOptions, assetName?: string, pat
  * @returns A Promise resolving to FilteredResourceData containing all matching assets, or null.
  */
 export declare function files_listAll(options: ListOptions, assetName?: string, path?: string): Promise<FilteredResourceData | null>;
+/**
+ * What a listing attempt came back as.
+ *
+ * `files_listAll` answers `null` for three different things — an empty
+ * folder, a folder that is not there, and a folder the server would not
+ * describe — and nothing above it can behave correctly on one word that
+ * means all three (#462). This says which.
+ */
+export type ListingOutcome = 
+/** The folder answered, with these entries (possibly none of them). */
+{
+    kind: "listing";
+    data: FilteredResourceData;
+}
+/** The folder answered and holds nothing of this kind. */
+ | {
+    kind: "empty";
+}
+/** No such folder, or no context to resolve one against. */
+ | {
+    kind: "missing";
+}
+/** The folder exists as far as anyone knows; the server would not say. */
+ | {
+    kind: "refused";
+    error: Error;
+};
+/**
+ * Lists files, links or directories, saying which of the three answers it got.
+ *
+ * The typed complement to {@link files_listAll}: same walk, same options, but
+ * an empty folder, a missing one and a refusal are told apart. A caller that
+ * renders a listing must use this — "nothing here" and "I could not read it"
+ * look identical to an operator otherwise, and only one of them is true.
+ *
+ * @param options - Search options (limit and offset are managed internally).
+ * @param assetName - The type of asset to list ('files', 'links', 'dirs').
+ * @param path - Optional ChRIS path. Defaults to current folder context.
+ * @returns Which answer the folder gave.
+ */
+export declare function files_listOutcome(options: ListOptions, assetName?: string, path?: string): Promise<ListingOutcome>;
 /**
  * Get the list of available fields for files, links, or directories.
  *

package/dist/files/index.js

@@ -50,6 +50,7 @@ exports.files_mkdir = files_mkdir;
 exports.files_getGroup = files_getGroup;
 exports.files_list = files_list;
 exports.files_listAll = files_listAll;
+exports.files_listOutcome = files_listOutcome;
 exports.fileFields_get = fileFields_get;
 exports.files_delete = files_delete;
 exports.folderByPath_delete = folderByPath_delete;
@@ -414,11 +415,38 @@ async function files_list(options, assetName = "files", path) {
  * @returns A Promise resolving to FilteredResourceData containing all matching assets, or null.
  */
 async function files_listAll(options, assetName = "files", path) {
+    const outcome = await files_listOutcome(options, assetName, path);
+    if (outcome.kind === "refused")
+        throw outcome.error;
+    return outcome.kind === "listing" ? outcome.data : null;
+}
+/**
+ * Lists files, links or directories, saying which of the three answers it got.
+ *
+ * The typed complement to {@link files_listAll}: same walk, same options, but
+ * an empty folder, a missing one and a refusal are told apart. A caller that
+ * renders a listing must use this — "nothing here" and "I could not read it"
+ * look identical to an operator otherwise, and only one of them is true.
+ *
+ * @param options - Search options (limit and offset are managed internally).
+ * @param assetName - The type of asset to list ('files', 'links', 'dirs').
+ * @param path - Optional ChRIS path. Defaults to current folder context.
+ * @returns Which answer the folder gave.
+ */
+async function files_listOutcome(options, assetName = "files", path) {
     const group = await files_getGroup(assetName, path);
     if (!group) {
-        return null;
+        return { kind: "missing" };
+    }
+    try {
+        const data = await group.asset.resources_getAll(options);
+        if (data === null || !data.tableData)
+            return { kind: "empty" };
+        return { kind: "listing", data };
+    }
+    catch (error) {
+        return { kind: "refused", error: error instanceof Error ? error : new Error(String(error)) };
     }
-    return await group.asset.resources_getAll(options);
 }
 /**
  * Get the list of available fields for files, links, or directories.
@@ -450,6 +478,14 @@ async function files_delete(id, assetName = "files", parentPath) {
     if (!group) {
         return false;
     }
+    // A file is deleted by its id, not by finding it in a listing first: the
+    // folder whose listing the server refuses is exactly the one an operator
+    // needs to clear, and a delete that walks the parent cannot help there
+    // (#462). Other asset kinds still resolve through the group.
+    if (assetName === "files") {
+        const removed = await cumin_1.chrisIO.file_deleteById(id);
+        return removed.ok && removed.value;
+    }
     // A freshly created group has no loaded collection, and deletion resolves
     // the id against the loaded list; load it explicitly so deleting works
     // without depending on a prior listing of the same folder.

package/dist/files/index.js.map

@@ -1 +1 @@
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
package/dist/pipelines/index.js

@@ -102,16 +102,16 @@ async function pipelines_getAll() {
         cumin_1.errorStack.stack_push('error', 'Not connected to ChRIS');
         return (0, cumin_1.Err)();
     }
-    const [pipelinesResult, sourceFilesPage] = await Promise.all([
+    const [pipelinesResult, sourceFiles] = await Promise.all([
         (0, cumin_1.pipelines_list)(),
-        (0, cumin_1.pipelineSourceFilesPage_get)(client, { limit: 1000 })
+        (0, cumin_1.pipelineSourceFiles_drain)(client)
             .catch(() => null),
     ]);
     if (!pipelinesResult.ok)
         return (0, cumin_1.Err)();
     const idToSourceFilename = new Map();
-    if (sourceFilesPage) {
-        for (const row of sourceFilesPage.data) {
+    if (sourceFiles) {
+        for (const row of sourceFiles) {
             const { fname, pipeline_id } = row;
             if (pipeline_id && fname) {
                 idToSourceFilename.set(pipeline_id, fname);
@@ -151,14 +151,14 @@ async function pipelineManifestBySlug_get(slug) {
     if (cached !== undefined)
         cache.delete(slug);
     try {
-        const [pipelineHandle, sourcePage] = await Promise.all([
+        const [pipelineHandle, sourceRowsAll] = await Promise.all([
             (0, cumin_1.pipeline_get)(client, pipelineID),
-            (0, cumin_1.pipelineSourceFilesPage_get)(client, { pipeline_id: pipelineID, limit: 1000 }),
+            (0, cumin_1.pipelineSourceFiles_drain)(client, { pipeline_id: pipelineID }),
         ]);
         if (pipelineHandle === null || pipelineHandle.data === null)
             return (0, cumin_1.Err)();
         const pipeline = pipelineHandle.data;
-        const sourceRows = sourcePage.data;
+        const sourceRows = sourceRowsAll;
         const source = sourceRows.find((row) => row.pipeline_id === pipelineID)
             ?? sourceRows.find((row) => row.pipeline_name === pipeline.name)
             ?? (sourceRows.length === 1 ? sourceRows[0] : undefined);

package/dist/pipelines/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/pipelines/index.ts"],"names":[],"mappings":";AAAA;;;;;;;GAOG;;;;;;AAyGH,wCAWC;AAOD,8CAGC;AAKD,gDAIC;AASD,4CA+BC;AAWD,gEAoDC;AAqCD,gDAaC;AAUD,oCAsBC;AASD,gDAgCC;AAOD,kDAiBC;AA/XD,yCAsBuB;AAEvB,2CAKsB;AAJpB,iHAAA,mBAAmB,OAAA;AAKrB,6CAOuB;AANrB,qHAAA,sBAAsB,OAAA;AACtB,uHAAA,wBAAwB,OAAA;AACxB,mHAAA,oBAAoB,OAAA;AACpB,mHAAA,oBAAoB,OAAA;AACpB,uHAAA,wBAAwB,OAAA;AAG1B,6CAMuB;AALrB,mHAAA,oBAAoB,OAAA;AAMtB,iDAOyB;AANvB,2HAAA,0BAA0B,OAAA;AAO5B,kDAA0B;AAC1B,+CAIuB;AACvB,mDAIyB;AAYzB,MAAM,oBAAoB,GAAW,CAAC,GAAG,EAAE,GAAG,IAAI,CAAC;AACnD,MAAM,kBAAkB,GAAyD,IAAI,OAAO,EAAE,CAAC;AAE/F,SAAS,qBAAqB,CAAC,MAAc;IAC3C,IAAI,KAAK,GAAoD,kBAAkB,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC;IAC5F,IAAI,KAAK,KAAK,SAAS,EAAE,CAAC;QACxB,KAAK,GAAG,IAAI,GAAG,EAAE,CAAC;QAClB,kBAAkB,CAAC,GAAG,CAAC,MAAM,EAAE,KAAK,CAAC,CAAC;IACxC,CAAC;IACD,OAAO,KAAK,CAAC;AACf,CAAC;AAED,SAAS,mBAAmB,CAAC,QAAwB,EAAE,cAAuB;IAC5E,MAAM,UAAU,GAAuB,cAAc;QACnD,EAAE,KAAK,CAAC,GAAG,CAAC,CAAC,GAAG,EAAE,EAAE,OAAO,CAAC,aAAa,EAAE,EAAE,CAAC,CAAC;IACjD,MAAM,aAAa,GAAW,QAAQ,CAAC,IAAI;SACxC,OAAO,CAAC,eAAe,EAAE,GAAG,CAAC;SAC7B,OAAO,CAAC,KAAK,EAAE,GAAG,CAAC;SACnB,OAAO,CAAC,QAAQ,EAAE,EAAE,CAAC,CAAC;IACzB,OAAO,GAAG,UAAU,IAAI,aAAa,MAAM,QAAQ,CAAC,EAAE,EAAE,CAAC;AAC3D,CAAC;AAED;;;;;GAKG;AACI,KAAK,UAAU,cAAc,CAClC,MAAe;IAEf,MAAM,MAAM,GAA6B,MAAM,IAAA,sBAAoB,EAAC,MAAM,CAAC,CAAC;IAC5E,IAAI,CAAC,MAAM,CAAC,EAAE,IAAI,MAAM,CAAC,KAAK,CAAC,MAAM,KAAK,CAAC;QAAE,OAAO,IAAI,CAAC;IAEzD,MAAM,OAAO,GAA8B,MAAM,CAAC,KAAkC,CAAC;IACrF,OAAO;QACL,SAAS,EAAE,OAAO;QAClB,cAAc,EAAE,CAAC,IAAI,EAAE,MAAM,EAAE,SAAS,EAAE,UAAU,EAAE,aAAa,CAAC;KACrE,CAAC;AACJ,CAAC;AAED;;;;GAIG;AACI,KAAK,UAAU,iBAAiB,CAAC,UAAgC,EAAE;IACxE,MAAM,KAAK,GAAuB,IAAI,0BAAkB,EAAE,CAAC;IAC3D,OAAO,MAAM,KAAK,CAAC,KAAK,CAAC,gBAAgB,CAAC,OAAO,CAAC,CAAC;AACrD,CAAC;AAED;;GAEG;AACI,KAAK,UAAU,kBAAkB;IACtC,MAAM,KAAK,GAAuB,IAAI,0BAAkB,EAAE,CAAC;IAC3D,MAAM,MAAM,GAAG,MAAM,KAAK,CAAC,KAAK,CAAC,kBAAkB,EAAE,CAAC;IACtD,OAAO,MAAM,CAAC,CAAC,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,IAAI,CAAC;AACvC,CAAC;AAED;;;;;;GAMG;AACI,KAAK,UAAU,gBAAgB;IACpC,MAAM,MAAM,GAAqB,MAAM,uBAAe,CAAC,UAAU,EAAE,CAAC;IACpE,IAAI,CAAC,MAAM,EAAE,CAAC;QACZ,kBAAU,CAAC,UAAU,CAAC,OAAO,EAAE,wBAAwB,CAAC,CAAC;QACzD,OAAO,IAAA,WAAG,GAAE,CAAC;IACf,CAAC;IAED,MAAM,CAAC,eAAe,EAAE,WAAW,CAAC,GAAG,MAAM,OAAO,CAAC,GAAG,CAAC;QACvD,IAAA,sBAAoB,GAAE;QACtB,IAAA,iCAAyB,EAAC,MAAM,CAAC;aAC9B,KAAK,CAAC,GAAoC,EAAE,CAAC,IAAI,CAAC;KACtD,CAAC,CAAC;IAEH,IAAI,CAAC,eAAe,CAAC,EAAE;QAAE,OAAO,IAAA,WAAG,GAAE,CAAC;IAEtC,MAAM,kBAAkB,GAAwB,IAAI,GAAG,EAAkB,CAAC;IAC1E,IAAI,WAAW,EAAE,CAAC;QAChB,KAAK,MAAM,GAAG,IAAI,WAAW,EAAE,CAAC;YAC9B,MAAM,EAAE,KAAK,EAAE,WAAW,EAAE,GAAG,GAAG,CAAC;YACnC,IAAI,WAAW,IAAI,KAAK,EAAE,CAAC;gBACzB,kBAAkB,CAAC,GAAG,CAAC,WAAW,EAAE,KAAK,CAAC,CAAC;YAC7C,CAAC;QACH,CAAC;IACH,CAAC;IAED,MAAM,OAAO,GAAG,eAAe,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,QAAwB,EAAE,EAAE,CAAC,CAAC;QACvE,GAAG,QAAQ;QACX,IAAI,EAAE,mBAAmB,CAAC,QAAQ,EAAE,kBAAkB,CAAC,GAAG,CAAC,QAAQ,CAAC,EAAE,CAAC,CAAC;KACzE,CAAC,CAAC,CAAC;IAEJ,OAAO,IAAA,UAAE,EAAC,OAAO,CAAC,CAAC;AACrB,CAAC;AAED;;;;;;;;GAQG;AACI,KAAK,UAAU,0BAA0B,CAAC,IAAY;IAC3D,MAAM,KAAK,GAA4B,IAAI,CAAC,KAAK,CAAC,WAAW,CAAC,CAAC;IAC/D,IAAI,KAAK,KAAK,IAAI;QAAE,OAAO,IAAA,WAAG,GAAE,CAAC;IAEjC,MAAM,UAAU,GAAW,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC;IAC5C,MAAM,MAAM,GAAqB,MAAM,uBAAe,CAAC,UAAU,EAAE,CAAC;IACpE,IAAI,CAAC,MAAM,EAAE,CAAC;QACZ,kBAAU,CAAC,UAAU,CAAC,OAAO,EAAE,wBAAwB,CAAC,CAAC;QACzD,OAAO,IAAA,WAAG,GAAE,CAAC;IACf,CAAC;IACD,MAAM,KAAK,GAAwC,qBAAqB,CAAC,MAAgB,CAAC,CAAC;IAC3F,MAAM,MAAM,GAAuC,KAAK,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC;IACnE,IAAI,MAAM,KAAK,SAAS,IAAI,MAAM,CAAC,SAAS,GAAG,IAAI,CAAC,GAAG,EAAE,EAAE,CAAC;QAC1D,OAAO,IAAA,6CAA+B,EACpC,MAAM,CAAC,MAAM,EACb,MAAM,CAAC,QAAQ,EACf,EAAE,MAAM,EAAE,YAAY,EAAE,CACzB,CAAC;IACJ,CAAC;IACD,IAAI,MAAM,KAAK,SAAS;QAAE,KAAK,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;IAE7C,IAAI,CAAC;QACH,MAAM,CAAC,cAAc,EAAE,aAAa,CAAC,GACnC,MAAM,OAAO,CAAC,GAAG,CAAC;YAChB,IAAA,oBAAY,EAAC,MAAM,EAAE,UAAU,CAAC;YAChC,IAAA,iCAAyB,EAAC,MAAM,EAAE,EAAE,WAAW,EAAE,UAAU,EAAE,CAAC;SAC/D,CAAC,CAAC;QACL,IAAI,cAAc,KAAK,IAAI,IAAI,cAAc,CAAC,IAAI,KAAK,IAAI;YAAE,OAAO,IAAA,WAAG,GAAE,CAAC;QAC1E,MAAM,QAAQ,GAAmB,cAAc,CAAC,IAAI,CAAC;QAErD,MAAM,UAAU,GAA6B,aAAa,CAAC;QAC3D,MAAM,MAAM,GAAuC,UAAU,CAAC,IAAI,CAChE,CAAC,GAA2B,EAAW,EAAE,CAAC,GAAG,CAAC,WAAW,KAAK,UAAU,CACzE;eACI,UAAU,CAAC,IAAI,CAChB,CAAC,GAA2B,EAAW,EAAE,CAAC,GAAG,CAAC,aAAa,KAAK,QAAQ,CAAC,IAAI,CAC9E;eACE,CAAC,UAAU,CAAC,MAAM,KAAK,CAAC,CAAC,CAAC,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC;QAC3D,MAAM,SAAS,GAAW,mBAAmB,CAAC,QAAQ,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;QACvE,IAAI,SAAS,KAAK,IAAI;YAAE,OAAO,IAAA,WAAG,GAAE,CAAC;QACrC,MAAM,MAAM,GAAmB,EAAE,GAAG,QAAQ,EAAE,IAAI,EAAE,SAAS,EAAE,CAAC;QAChE,KAAK,CAAC,GAAG,CAAC,IAAI,EAAE;YACd,MAAM;YACN,QAAQ,EAAE,cAAc;YACxB,SAAS,EAAE,IAAI,CAAC,GAAG,EAAE,GAAG,oBAAoB;SAC7C,CAAC,CAAC;QACH,OAAO,IAAA,6CAA+B,EAAC,MAAM,EAAE,cAAc,EAAE,EAAE,MAAM,EAAE,YAAY,EAAE,CAAC,CAAC;IAC3F,CAAC;IAAC,OAAO,KAAc,EAAE,CAAC;QACxB,MAAM,OAAO,GAAW,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;QAC/E,kBAAU,CAAC,UAAU,CAAC,O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package/dist/vfs/providers/native.js

@@ -31,19 +31,49 @@ class NativeVfsProvider {
         try {
             const fetchOpts = { limit: 1000, offset: 0 };
             const resolvedPath = pathStr || "/";
-            // Parallelize files/dirs/links API requests
-            const results = await Promise.allSettled([
-                (0, index_js_1.files_listAll)(fetchOpts, "dirs", resolvedPath),
-                (0, index_js_1.files_listAll)(fetchOpts, "files", resolvedPath),
-                (0, index_js_1.files_listAll)(fetchOpts, "links", resolvedPath),
+            // Parallelize files/dirs/links API requests. The typed outcome tells a
+            // refusal from an empty folder, which is the whole point: they read
+            // the same on screen and only one of them is true (#462).
+            const outcomes = await Promise.all([
+                (0, index_js_1.files_listOutcome)(fetchOpts, "dirs", resolvedPath),
+                (0, index_js_1.files_listOutcome)(fetchOpts, "files", resolvedPath),
+                (0, index_js_1.files_listOutcome)(fetchOpts, "links", resolvedPath),
             ]);
+            const results = outcomes.map((outcome) => outcome.kind === "refused"
+                ? { status: "rejected", reason: outcome.error }
+                : { status: "fulfilled", value: outcome.kind === "listing" ? outcome.data : null });
             const [dirsResult, filesResult, linksResult] = results;
+            // A sub-listing that FAILED is not a sub-listing that was empty. The
+            // folders of a home root list while its files 500, and rendering the
+            // folders alone as the answer is the listing lying about the store
+            // (#462). What could not be read is named, and the caller decides
+            // what to do with a partial answer — it is never silently whole.
+            const unread = [];
+            const kinds = ['directories', 'files', 'links'];
+            results.forEach((settled, index) => {
+                const kind = kinds[index] ?? 'entries';
+                if (settled.status === 'rejected') {
+                    const reason = settled.reason;
+                    const message = reason instanceof Error ? reason.message : String(reason);
+                    unread.push(`${kind} (${message})`);
+                    return;
+                }
+                const short = settled.value?.incomplete;
+                if (short !== undefined)
+                    unread.push(`${kind} (${short.reason})`);
+            });
+            if (unread.length > 0) {
+                cumin_1.errorStack.stack_push('error', `Cannot fully list ${resolvedPath}: could not read ${unread.join(', ')}`);
+            }
             // files_listAll returns null both for a failed folder resolution and for
             // an existing folder whose collection is simply empty. When every
             // sub-listing comes back empty-or-failed the two cases are
             // indistinguishable here, so probe the parent listing: a missing folder
             // must surface as an error, not render as an empty directory.
-            const noneSucceeded = results.every((settled) => settled.status === "rejected" || !settled.value?.tableData);
+            // Nothing came back from any of the three, and none of them refused:
+            // either the folder is empty or it is not there, and only the parent
+            // can say which.
+            const noneSucceeded = outcomes.every((outcome) => outcome.kind !== "listing");
             if (noneSucceeded && resolvedPath !== "/") {
                 const dirExists = await path_checkIsDir(resolvedPath);
                 if (!dirExists.ok) {
@@ -132,6 +162,14 @@ class NativeVfsProvider {
             const finalDest = (destIsDir.value || destLooksDir)
                 ? path_1.default.posix.join(dest, path_1.default.posix.basename(src))
                 : dest;
+            // A write onto a path the store already holds leaves a row CUBE's own
+            // API cannot serve, and one such row makes every listing of that
+            // folder fail (docs/CUBE-gaps.adoc). The store has no overwrite, so
+            // this is refused by name rather than attempted.
+            if (!srcIsDir.value && await path_checkFileExists(finalDest)) {
+                cumin_1.errorStack.stack_push("error", `Destination exists: ${finalDest} — mise cannot overwrite a file; remove it first`);
+                return false;
+            }
             if (options.recursive) {
                 return await (0, index_js_1.files_copyRecursively)(src, finalDest);
             }
@@ -147,6 +185,35 @@ class NativeVfsProvider {
     }
 }
 exports.NativeVfsProvider = NativeVfsProvider;
+/**
+ * Whether a ChRIS path is already held by a file.
+ *
+ * The question a write must ask first, since the store has no overwrite and
+ * a write onto an occupied path damages the folder's listing.
+ *
+ * @param targetPath - The absolute ChRIS path to check.
+ * @returns True when a file of that name is already there, or when the
+ *   probe itself could not answer.
+ */
+async function path_checkFileExists(targetPath) {
+    const parent = path_1.default.posix.dirname(targetPath);
+    const name = path_1.default.posix.basename(targetPath);
+    try {
+        const results = await (0, index_js_1.files_listAll)({ limit: 1000, offset: 0 }, "files", parent);
+        if (!results || !results.tableData) {
+            return false;
+        }
+        return results.tableData.some((entry) => {
+            const candidate = typeof entry.fname === "string" ? entry.fname : "";
+            return candidate === targetPath || path_1.default.posix.basename(candidate) === name;
+        });
+    }
+    catch {
+        // A probe that cannot answer counts the path as taken: the cost of
+        // guessing wrong is the operator's folder.
+        return true;
+    }
+}
 /**
  * Determines whether a given ChRIS path refers to a directory.
  *

package/dist/vfs/providers/native.js.map

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package/dist/vfs/providers/pacs.js

@@ -23,33 +23,41 @@ const pacs_content_js_1 = require("./pacs_content.js");
 function pacsRoot_list() {
     return (0, cumin_1.Ok)([{ name: "queries", type: "vfs", size: 0, owner: "root", date: new Date().toISOString() }]);
 }
+/**
+ * Lists the query log: every query this identity has asked, not a page of them.
+ *
+ * The log used to be the first hundred records CUBE returned, which on a
+ * working CUBE is a small fraction of them — an operator looking for a query
+ * they knew they had run simply could not see it. A listing shows what is
+ * there (#401).
+ *
+ * Served from the query index, which holds the whole log and is filled by a
+ * background sweep. A cold index falls back to sweeping now: slower, but
+ * complete, and it warms the index for everything after.
+ *
+ * @param options - Sort and order.
+ * @returns Every stored query as a folder.
+ */
 async function queries_list(options) {
-    const queriesResult = await (0, index_js_1.pacsQueries_list)({ limit: 100 });
-    if (!queriesResult || !queriesResult.ok || !queriesResult.value)
-        return (0, cumin_1.Ok)([]);
-    const items = queriesResult.value.tableData.map((row) => {
-        const queryId = String(row.id);
-        const title = typeof row.title === "string" ? row.title : "query";
-        const queryStr = typeof row.query === "string" ? row.query : "";
-        let queryObj = {};
-        try {
-            if (queryStr)
-                queryObj = JSON.parse(queryStr);
-        }
-        catch { /* ignore */ }
-        const hasResult = typeof row.result === "string" && row.result.trim().length > 0;
-        const ownerUsername = typeof row.owner_username === "string" ? row.owner_username : "";
-        const creationDate = typeof row.creation_date === "string" ? row.creation_date : new Date().toISOString();
-        return {
-            name: (0, pacsHelpers_js_1.queryFolderName_build)({
-                queryId, queryObj, title, username: ownerUsername || undefined, hasResult,
-            }),
-            type: "dir",
-            size: 0,
-            owner: ownerUsername || "system",
-            date: creationDate,
-        };
-    });
+    const index = (0, cumin_1.queryIndex_get)();
+    if (index.size_get() === 0) {
+        // Nothing held yet: fill it rather than show a page of the log and
+        // call it the log.
+        await (0, cumin_1.queryIndex_sweep)();
+    }
+    const items = index.entries_all().map((entry) => ({
+        name: (0, pacsHelpers_js_1.queryFolderName_build)({
+            queryId: String(entry.queryId),
+            queryObj: entry.criteria,
+            title: "query",
+            username: entry.owner || undefined,
+            hasResult: entry.hasResult,
+        }),
+        type: "dir",
+        size: 0,
+        owner: entry.owner || "system",
+        date: entry.answeredAt,
+    }));
     return (0, cumin_1.Ok)((0, sort_js_1.vfsItems_sort)(items, options?.sort, options?.reverse));
 }
 function studies_list(studies, options) {

package/dist/vfs/providers/pacs.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@fnndsc/salsa",
-  "version": "3.12.1",
+  "version": "3.13.0",
   "description": "Shared Application Logic and Service Assets for ChRIS",
   "repository": {
     "type": "git",
@@ -59,7 +59,7 @@
     "inflight": "npm:@aashutoshrathi/word-wrap@^1.2.6"
   },
   "dependencies": {
-    "@fnndsc/cumin": "^3.17.0",
+    "@fnndsc/cumin": "^3.18.0",
     "axios": "^1.6.8",
     "ws": "^8.21.0"
   }