@fnndsc/cumin 3.9.0 → 3.11.0

package/dist/chrisapi/adapter.d.ts

@@ -141,6 +141,17 @@ export declare function collectionItems_get<T>(resource: {
  * @throws {Error} When the named method does not exist on the object.
  */
 export declare function resource_call<T>(obj: object, methodName: string, ...args: unknown[]): Promise<T>;
+/**
+ * Tests whether a chrisapi object exposes a named runtime method.
+ *
+ * Companion to `resource_call` for methods that are legitimately optional
+ * across CUBE/chrisapi versions (e.g. `getPublicFeeds`, `getLogs`).
+ *
+ * @param obj - The chrisapi object to probe.
+ * @param methodName - Name of the method to look for.
+ * @returns True when the object has a callable property of that name.
+ */
+export declare function method_exists(obj: object, methodName: string): boolean;
 /**
  * Deletes a PACS retrieve resource addressed by URL.
  *

package/dist/chrisapi/adapter.js

@@ -63,6 +63,7 @@ exports.itemData_get = itemData_get;
 exports.items_get = items_get;
 exports.collectionItems_get = collectionItems_get;
 exports.resource_call = resource_call;
+exports.method_exists = method_exists;
 exports.pacsRetrieve_deleteByUrl = pacsRetrieve_deleteByUrl;
 const chrisapi_1 = __importStar(require("@fnndsc/chrisapi"));
 exports.Client = chrisapi_1.default;
@@ -205,6 +206,19 @@ async function resource_call(obj, methodName, ...args) {
     }
     return method.apply(obj, args);
 }
+/**
+ * Tests whether a chrisapi object exposes a named runtime method.
+ *
+ * Companion to `resource_call` for methods that are legitimately optional
+ * across CUBE/chrisapi versions (e.g. `getPublicFeeds`, `getLogs`).
+ *
+ * @param obj - The chrisapi object to probe.
+ * @param methodName - Name of the method to look for.
+ * @returns True when the object has a callable property of that name.
+ */
+function method_exists(obj, methodName) {
+    return typeof obj[methodName] === 'function';
+}
 /**
  * Deletes a PACS retrieve resource addressed by URL.
  *

package/dist/chrisapi/adapter.js.map

@@ -1 +1 @@
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package/dist/chrisapi/contract.d.ts

@@ -0,0 +1,336 @@
+/**
+ * @file Typed ChRIS API contract — domain-typed access to the hot wire surfaces.
+ *
+ * The adapter (`adapter.ts`) is the unsafe seam: the only module that imports
+ * `@fnndsc/chrisapi` and the only one allowed to cast against it. This module
+ * is the typed floor above that seam. It declares the wire shapes for the two
+ * surfaces that have produced live defects (the jobs surface: plugin
+ * instances, feeds; the PACS surface: download tokens, PACS files) and exposes
+ * domain-typed accessors built purely on the adapter's generics. Downstream
+ * packages call these instead of casting the opaque client per call site,
+ * which is what this module exists to end.
+ *
+ * Key components:
+ *   - ListPage<T>: normalized page shape (data + totalCount) for CUBE lists
+ *   - FeedData / PluginInstanceData / InstanceParameterData: wire row shapes
+ *   - feedsPage_get / publicFeedsPage_get / pluginInstancesPage_get: paged reads
+ *   - pluginInstance_get: detail handle (data, parameters, status, logs, delete)
+ *   - downloadToken_create: PACS/LONK download token
+ *
+ * Dependencies: only `adapter.ts`. This file must contain no unchecked double
+ * casts and no `@fnndsc/chrisapi` import; the cast ratchet and the seam lint
+ * enforce that shape.
+ *
+ * @module
+ */
+import { Client } from './adapter';
+import type { PipelineRecord } from '../pipelines/chrisPipeline';
+/**
+ * One normalized page of a paginated CUBE list.
+ *
+ * @property data - The rows of this page, in server order.
+ * @property totalCount - The collection's total row count when the server
+ *   reported one, otherwise null. A null total means "unknown", not zero.
+ */
+export interface ListPage<T> {
+    data: T[];
+    totalCount: number | null;
+}
+/**
+ * Wire shape of one CUBE feed row, as served by the feeds list endpoints.
+ *
+ * @property id - Feed id.
+ * @property name - Feed title.
+ * @property owner_username - Owning user, when serialized.
+ * @property public - Public visibility flag.
+ * @property creation_date - ISO creation timestamp.
+ * @property finished_jobs - Count of jobs finished successfully.
+ * @property errored_jobs - Count of jobs finished with error.
+ * @property started_jobs - Count of running jobs.
+ * @property scheduled_jobs - Count of scheduled jobs.
+ * @property cancelled_jobs - Count of cancelled jobs.
+ * @property created_jobs - Count of created (not yet scheduled) jobs.
+ */
+export interface FeedData {
+    id: number;
+    name: string;
+    owner_username?: string;
+    public?: boolean;
+    creation_date?: string;
+    finished_jobs?: number;
+    errored_jobs?: number;
+    started_jobs?: number;
+    scheduled_jobs?: number;
+    cancelled_jobs?: number;
+    created_jobs?: number;
+    [key: string]: unknown;
+}
+/**
+ * Wire shape of one CUBE plugin-instance row.
+ *
+ * @property id - Instance id.
+ * @property feed_id - Owning feed id.
+ * @property previous_id - Parent instance id, or null for a feed root.
+ * @property plugin_name - Name of the plugin this instance runs.
+ * @property plugin_type - Plugin type (`fs`, `ds`, `ts`), when serialized.
+ * @property status - Current job status string.
+ * @property output_path - CFS output directory, once CUBE records one.
+ * @property raw - Base64 zlib-compressed pfcon response, when present.
+ */
+export interface PluginInstanceData {
+    id: number;
+    feed_id: number;
+    previous_id?: number | null;
+    plugin_name: string;
+    plugin_type?: string;
+    status?: string;
+    output_path?: string;
+    raw?: string;
+    [key: string]: unknown;
+}
+/**
+ * One resolved parameter value recorded on a plugin instance.
+ *
+ * @property param_name - The parameter's flag name.
+ * @property value - The recorded invocation value.
+ */
+export interface InstanceParameterData {
+    param_name?: string;
+    value?: unknown;
+}
+/**
+ * A CUBE file-download token, used for authenticated downloads and the LONK
+ * WebSocket.
+ *
+ * @property token - The token string.
+ * @property url - REST URL of the token resource (its origin hosts the LONK
+ *   WebSocket endpoint).
+ */
+export interface DownloadToken {
+    token: string;
+    url: string;
+}
+/**
+ * Typed handle over one plugin-instance detail resource.
+ *
+ * Wraps the live chrisapi resource so callers can read its payload and drive
+ * its lifecycle without touching the unsafe object.
+ *
+ * @property data - The instance's wire payload, or null when the resource
+ *   carries none (the sub-resources and lifecycle methods still work).
+ */
+export interface PluginInstanceHandle {
+    data: PluginInstanceData | null;
+    /**
+     * Reads one page of the instance's effective parameter values.
+     *
+     * @param params - Page window (limit, offset).
+     * @returns The page of recorded parameter values.
+     */
+    parametersPage_get(params: {
+        limit: number;
+        offset: number;
+    }): Promise<ListPage<InstanceParameterData>>;
+    /**
+     * Writes a new status to the instance (e.g. `cancelled`).
+     *
+     * @param status - The status string to PUT.
+     */
+    status_set(status: string): Promise<void>;
+    /** Deletes the instance record from CUBE. */
+    delete(): Promise<void>;
+    /**
+     * Fetches the instance's log text via its logs sub-resource.
+     *
+     * @returns The joined log text, or null when this instance's resource does
+     *   not expose logs.
+     */
+    logs_get(): Promise<string | null>;
+}
+/**
+ * Reads one page of the session user's feeds (owned and shared).
+ *
+ * @param client - Connected chrisapi client.
+ * @param params - CUBE search/pagination params (limit, offset, id, ...).
+ * @returns The typed feed page.
+ * @throws {Error} Propagates chrisapi/network errors.
+ */
+export declare function feedsPage_get(client: Client, params: Record<string, unknown>): Promise<ListPage<FeedData>>;
+/**
+ * Reads one page of public feeds, when the connected CUBE offers them.
+ *
+ * @param client - Connected chrisapi client.
+ * @param params - CUBE search/pagination params.
+ * @returns The typed feed page, or null when the client has no public-feeds
+ *   endpoint (older CUBE versions).
+ * @throws {Error} Propagates chrisapi/network errors.
+ */
+export declare function publicFeedsPage_get(client: Client, params: Record<string, unknown>): Promise<ListPage<FeedData> | null>;
+/**
+ * Reads one page of plugin instances, optionally filtered.
+ *
+ * @param client - Connected chrisapi client.
+ * @param params - CUBE search/pagination params (feed_id, id, plugin_name, ...).
+ * @returns The typed instance page.
+ * @throws {Error} Propagates chrisapi/network errors.
+ */
+export declare function pluginInstancesPage_get(client: Client, params: Record<string, unknown>): Promise<ListPage<PluginInstanceData>>;
+/**
+ * Fetches one plugin instance's detail resource as a typed handle.
+ *
+ * @param client - Connected chrisapi client.
+ * @param instanceID - The plugin instance id.
+ * @returns The typed handle, or null when CUBE returns no such instance.
+ * @throws {Error} Propagates chrisapi/network errors.
+ */
+export declare function pluginInstance_get(client: Client, instanceID: number): Promise<PluginInstanceHandle | null>;
+/**
+ * Wire shape of one registered pipeline source file row.
+ *
+ * @property fname - CFS path of the uploaded pipeline source.
+ * @property pipeline_name - Name of the pipeline it registered.
+ * @property pipeline_id - Id of the pipeline it registered.
+ */
+export interface PipelineSourceFileData {
+    fname: string;
+    pipeline_name?: string;
+    pipeline_id?: number;
+    [key: string]: unknown;
+}
+/**
+ * Wire shape of one plugin piping row in a registered pipeline.
+ *
+ * @property id - Piping id.
+ * @property title - Piping title, when authored.
+ * @property plugin_name - Name of the plugin this piping runs.
+ * @property plugin_version - Version of that plugin.
+ * @property previous_id - Parent piping id, or null for the root.
+ */
+export interface PluginPipingData {
+    id: number;
+    title?: string;
+    plugin_name?: string;
+    plugin_version?: string;
+    previous_id?: number | null;
+    [key: string]: unknown;
+}
+/**
+ * Wire shape of one stored piping default-parameter row.
+ *
+ * @property plugin_piping_id - Piping the default belongs to.
+ * @property param_name - The parameter's flag name.
+ * @property value - The stored default value.
+ */
+export interface PipingDefaultParameterData {
+    plugin_piping_id?: number;
+    param_name?: string;
+    value?: unknown;
+    [key: string]: unknown;
+}
+/**
+ * Wire shape of one plugin parameter definition row.
+ *
+ * @property name - The parameter's flag name.
+ * @property type - Declared value type (e.g. "string").
+ * @property optional - Whether the parameter may be omitted.
+ * @property default - Declared default value.
+ * @property help - Author-provided help text.
+ */
+export interface PluginParameterData {
+    name: string;
+    type?: string;
+    optional?: boolean;
+    default?: unknown;
+    help?: string;
+    [key: string]: unknown;
+}
+/**
+ * Wire shape of one compute-resource row attached to a plugin.
+ *
+ * @property name - The compute environment's name.
+ */
+export interface ComputeResourceData {
+    name?: string;
+    [key: string]: unknown;
+}
+/**
+ * Typed handle over one plugin detail resource (metadata surfaces only).
+ */
+export interface PluginHandle {
+    /**
+     * Reads one page of the plugin's declared parameters.
+     *
+     * @param params - Page window (limit, offset).
+     * @returns The page of parameter definitions.
+     */
+    parametersPage_get(params: Record<string, unknown>): Promise<ListPage<PluginParameterData>>;
+    /**
+     * Reads one page of the plugin's registered compute resources.
+     *
+     * @param params - Page window (limit, offset).
+     * @returns The page of compute-resource rows.
+     */
+    computeResourcesPage_get(params: Record<string, unknown>): Promise<ListPage<ComputeResourceData>>;
+}
+/**
+ * One plugin piping of a registered pipeline, with its plugin reachable.
+ *
+ * @property data - The piping's wire payload.
+ */
+export interface PluginPipingItem {
+    data: PluginPipingData;
+    /**
+     * Fetches the plugin this piping runs, when the item links one.
+     *
+     * @returns The plugin handle, or null when the item exposes no plugin link.
+     */
+    plugin_get(): Promise<PluginHandle | null>;
+}
+/**
+ * Typed handle over one registered pipeline resource.
+ *
+ * @property data - The pipeline's wire payload, or null when absent.
+ */
+export interface PipelineHandle {
+    data: PipelineRecord | null;
+    /**
+     * Reads the pipeline's plugin pipings as items (plugin link preserved).
+     *
+     * @param params - Page window (limit, offset).
+     * @returns The piping items of that page.
+     */
+    pluginPipings_get(params: Record<string, unknown>): Promise<PluginPipingItem[]>;
+    /**
+     * Reads one page of the stored piping default parameters.
+     *
+     * @param params - Page window (limit, offset).
+     * @returns The page of stored defaults.
+     */
+    defaultParametersPage_get(params: Record<string, unknown>): Promise<ListPage<PipingDefaultParameterData>>;
+}
+/**
+ * Fetches one registered pipeline's detail resource as a typed handle.
+ *
+ * @param client - Connected chrisapi client.
+ * @param pipelineID - The pipeline id.
+ * @returns The typed handle, or null when CUBE returns no such pipeline.
+ * @throws {Error} Propagates chrisapi/network errors.
+ */
+export declare function pipeline_get(client: Client, pipelineID: number): Promise<PipelineHandle | null>;
+/**
+ * Reads one page of registered pipeline source files.
+ *
+ * @param client - Connected chrisapi client.
+ * @param params - CUBE search/pagination params (pipeline_id, limit, ...).
+ * @returns The typed source-file page.
+ * @throws {Error} Propagates chrisapi/network errors.
+ */
+export declare function pipelineSourceFilesPage_get(client: Client, params: Record<string, unknown>): Promise<ListPage<PipelineSourceFileData>>;
+/**
+ * Creates a CUBE download token for authenticated file access and LONK.
+ *
+ * @param client - Connected chrisapi client.
+ * @returns The token string and the token resource's REST URL.
+ * @throws {Error} Propagates chrisapi/network errors.
+ */
+export declare function downloadToken_create(client: Client): Promise<DownloadToken>;

package/dist/chrisapi/contract.js

@@ -0,0 +1,219 @@
+"use strict";
+/**
+ * @file Typed ChRIS API contract — domain-typed access to the hot wire surfaces.
+ *
+ * The adapter (`adapter.ts`) is the unsafe seam: the only module that imports
+ * `@fnndsc/chrisapi` and the only one allowed to cast against it. This module
+ * is the typed floor above that seam. It declares the wire shapes for the two
+ * surfaces that have produced live defects (the jobs surface: plugin
+ * instances, feeds; the PACS surface: download tokens, PACS files) and exposes
+ * domain-typed accessors built purely on the adapter's generics. Downstream
+ * packages call these instead of casting the opaque client per call site,
+ * which is what this module exists to end.
+ *
+ * Key components:
+ *   - ListPage<T>: normalized page shape (data + totalCount) for CUBE lists
+ *   - FeedData / PluginInstanceData / InstanceParameterData: wire row shapes
+ *   - feedsPage_get / publicFeedsPage_get / pluginInstancesPage_get: paged reads
+ *   - pluginInstance_get: detail handle (data, parameters, status, logs, delete)
+ *   - downloadToken_create: PACS/LONK download token
+ *
+ * Dependencies: only `adapter.ts`. This file must contain no unchecked double
+ * casts and no `@fnndsc/chrisapi` import; the cast ratchet and the seam lint
+ * enforce that shape.
+ *
+ * @module
+ */
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.feedsPage_get = feedsPage_get;
+exports.publicFeedsPage_get = publicFeedsPage_get;
+exports.pluginInstancesPage_get = pluginInstancesPage_get;
+exports.pluginInstance_get = pluginInstance_get;
+exports.pipeline_get = pipeline_get;
+exports.pipelineSourceFilesPage_get = pipelineSourceFilesPage_get;
+exports.downloadToken_create = downloadToken_create;
+const adapter_1 = require("./adapter");
+/**
+ * Normalizes a raw chrisapi list response into a typed ListPage.
+ *
+ * @param page - The raw list resource (or null/undefined).
+ * @returns The typed page; totalCount is null when the server sent none.
+ */
+function listPage_wrap(page) {
+    const total = page?.totalCount;
+    return {
+        data: (0, adapter_1.listData_get)(page ?? undefined),
+        totalCount: typeof total === 'number' && total >= 0 ? total : null,
+    };
+}
+/**
+ * Reads one page of the session user's feeds (owned and shared).
+ *
+ * @param client - Connected chrisapi client.
+ * @param params - CUBE search/pagination params (limit, offset, id, ...).
+ * @returns The typed feed page.
+ * @throws {Error} Propagates chrisapi/network errors.
+ */
+async function feedsPage_get(client, params) {
+    return listPage_wrap(await (0, adapter_1.resource_call)(client, 'getFeeds', params));
+}
+/**
+ * Reads one page of public feeds, when the connected CUBE offers them.
+ *
+ * @param client - Connected chrisapi client.
+ * @param params - CUBE search/pagination params.
+ * @returns The typed feed page, or null when the client has no public-feeds
+ *   endpoint (older CUBE versions).
+ * @throws {Error} Propagates chrisapi/network errors.
+ */
+async function publicFeedsPage_get(client, params) {
+    if (!(0, adapter_1.method_exists)(client, 'getPublicFeeds'))
+        return null;
+    return listPage_wrap(await (0, adapter_1.resource_call)(client, 'getPublicFeeds', params));
+}
+/**
+ * Reads one page of plugin instances, optionally filtered.
+ *
+ * @param client - Connected chrisapi client.
+ * @param params - CUBE search/pagination params (feed_id, id, plugin_name, ...).
+ * @returns The typed instance page.
+ * @throws {Error} Propagates chrisapi/network errors.
+ */
+async function pluginInstancesPage_get(client, params) {
+    return listPage_wrap(await (0, adapter_1.resource_call)(client, 'getPluginInstances', params));
+}
+/**
+ * Fetches one plugin instance's detail resource as a typed handle.
+ *
+ * @param client - Connected chrisapi client.
+ * @param instanceID - The plugin instance id.
+ * @returns The typed handle, or null when CUBE returns no such instance.
+ * @throws {Error} Propagates chrisapi/network errors.
+ */
+async function pluginInstance_get(client, instanceID) {
+    const resource = await (0, adapter_1.resource_call)(client, 'getPluginInstance', instanceID);
+    if (!resource)
+        return null;
+    const data = (0, adapter_1.itemData_get)(resource);
+    return {
+        data,
+        async parametersPage_get(params) {
+            // Some chrisapi versions serve rows in `data`, others only via getItems().
+            return listPageFlexible_wrap(await (0, adapter_1.resource_call)(resource, 'getParameters', params));
+        },
+        async status_set(status) {
+            await (0, adapter_1.resource_call)(resource, 'put', { status });
+        },
+        async delete() {
+            await (0, adapter_1.resource_call)(resource, 'delete');
+        },
+        async logs_get() {
+            if (!(0, adapter_1.method_exists)(resource, 'getLogs'))
+                return null;
+            const logs = await (0, adapter_1.resource_call)(resource, 'getLogs');
+            const rows = (0, adapter_1.listData_get)(logs);
+            return rows.map((row) => (typeof row.log === 'string' ? row.log : '')).join('\n');
+        },
+    };
+}
+/**
+ * Normalizes a chrisapi list response that may serve rows in `data` or only
+ * via `getItems()` into a typed ListPage.
+ *
+ * @param page - The raw list resource.
+ * @returns The typed page; totalCount is null when the server sent none.
+ */
+function listPageFlexible_wrap(page) {
+    if (Array.isArray(page?.data) || typeof page?.getItems !== 'function') {
+        return listPage_wrap(page);
+    }
+    const rows = (0, adapter_1.items_get)(page)
+        .map((item) => (0, adapter_1.itemData_get)(item))
+        .filter((row) => row !== null);
+    const total = page?.totalCount;
+    return { data: rows, totalCount: typeof total === 'number' && total >= 0 ? total : null };
+}
+/**
+ * Wraps a plugin detail resource as a typed metadata handle.
+ *
+ * @param resource - The chrisapi plugin resource.
+ * @returns The typed handle.
+ */
+function pluginHandle_wrap(resource) {
+    return {
+        async parametersPage_get(params) {
+            return listPageFlexible_wrap(await (0, adapter_1.resource_call)(resource, 'getPluginParameters', params));
+        },
+        async computeResourcesPage_get(params) {
+            return listPageFlexible_wrap(await (0, adapter_1.resource_call)(resource, 'getPluginComputeResources', params));
+        },
+    };
+}
+/**
+ * Fetches one registered pipeline's detail resource as a typed handle.
+ *
+ * @param client - Connected chrisapi client.
+ * @param pipelineID - The pipeline id.
+ * @returns The typed handle, or null when CUBE returns no such pipeline.
+ * @throws {Error} Propagates chrisapi/network errors.
+ */
+async function pipeline_get(client, pipelineID) {
+    const resource = await (0, adapter_1.resource_call)(client, 'getPipeline', pipelineID);
+    if (!resource)
+        return null;
+    return {
+        data: (0, adapter_1.itemData_get)(resource),
+        async pluginPipings_get(params) {
+            const page = await (0, adapter_1.resource_call)(resource, 'getPluginPipings', params);
+            const rawItems = typeof page?.getItems === 'function'
+                ? (0, adapter_1.items_get)(page)
+                : (0, adapter_1.listData_get)(page).map((row) => ({ data: row }));
+            return rawItems
+                .map((item) => {
+                const data = (0, adapter_1.itemData_get)(item);
+                if (!data)
+                    return null;
+                return {
+                    data,
+                    async plugin_get() {
+                        if (!(0, adapter_1.method_exists)(item, 'getPlugin'))
+                            return null;
+                        const plugin = await (0, adapter_1.resource_call)(item, 'getPlugin');
+                        return plugin ? pluginHandle_wrap(plugin) : null;
+                    },
+                };
+            })
+                .filter((item) => item !== null);
+        },
+        async defaultParametersPage_get(params) {
+            return listPageFlexible_wrap(await (0, adapter_1.resource_call)(resource, 'getDefaultParameters', params));
+        },
+    };
+}
+/**
+ * Reads one page of registered pipeline source files.
+ *
+ * @param client - Connected chrisapi client.
+ * @param params - CUBE search/pagination params (pipeline_id, limit, ...).
+ * @returns The typed source-file page.
+ * @throws {Error} Propagates chrisapi/network errors.
+ */
+async function pipelineSourceFilesPage_get(client, params) {
+    return listPageFlexible_wrap(await (0, adapter_1.resource_call)(client, 'getPipelineSourceFiles', params));
+}
+/**
+ * Creates a CUBE download token for authenticated file access and LONK.
+ *
+ * @param client - Connected chrisapi client.
+ * @returns The token string and the token resource's REST URL.
+ * @throws {Error} Propagates chrisapi/network errors.
+ */
+async function downloadToken_create(client) {
+    const resource = await (0, adapter_1.resource_call)(client, 'createDownloadToken');
+    const data = (0, adapter_1.itemData_get)(resource);
+    return {
+        token: String(data?.token ?? ''),
+        url: String(resource?.url ?? ''),
+    };
+}
+//# sourceMappingURL=contract.js.map

package/dist/chrisapi/contract.js.map

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package/dist/context/chrisContext.js

@@ -281,6 +281,13 @@ class ChrisContext {
      * @returns True on success, false on failure.
      */
     async current_set(context, value) {
+        // Resolve the session-scoped filenames BEFORE writing: a fresh process's
+        // first context write otherwise lands at the unresolved location while
+        // every later read uses the resolved one (first-command `cd` lost its
+        // value this way). The same init runs again after the write because
+        // saving the user or URL changes which directory the filenames live in.
+        await config_js_1.sessionConfig.connection.init();
+        await config_js_1.sessionConfig.init();
         let status = false;
         switch (context) {
             case Context.ChRISuser:

package/dist/context/chrisContext.js.map

@@ -1 +1 @@
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package/dist/index.d.ts

@@ -44,6 +44,8 @@ export * from "./pluginmetas/chrisPluginMetas";
 export * from "./workflows/chrisWorkflows";
 export * from "./output/runtimeOutput";
 export { listData_get, itemData_get, items_get } from "./chrisapi/adapter";
+export { feedsPage_get, publicFeedsPage_get, pluginInstancesPage_get, pluginInstance_get, pipeline_get, pipelineSourceFilesPage_get, downloadToken_create, } from "./chrisapi/contract";
+export type { ListPage, FeedData, PluginInstanceData, InstanceParameterData, DownloadToken, PluginInstanceHandle, PipelineHandle, PluginPipingItem, PluginPipingData, PipingDefaultParameterData, PipelineSourceFileData, PluginParameterData, ComputeResourceData, PluginHandle, } from "./chrisapi/contract";
 export type { ListResource, Resource, ItemResource, PluginInstance, Feed, FileBrowserFolder, UserFile, PACSFile, } from "./chrisapi/adapter";
 /**
  * Shape of a single node (file, directory, or link) in a ChRIS path listing.

package/dist/index.js

@@ -24,7 +24,7 @@ var __exportStar = (this && this.__exportStar) || function(m, exports) {
     for (var p in m) if (p !== "default" && !Object.prototype.hasOwnProperty.call(exports, p)) __createBinding(exports, m, p);
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.items_get = exports.itemData_get = exports.listData_get = void 0;
+exports.downloadToken_create = exports.pipelineSourceFilesPage_get = exports.pipeline_get = exports.pluginInstance_get = exports.pluginInstancesPage_get = exports.publicFeedsPage_get = exports.feedsPage_get = exports.items_get = exports.itemData_get = exports.listData_get = void 0;
 exports.chrisVersion_get = chrisVersion_get;
 __exportStar(require("./"), exports);
 __exportStar(require("./error/errorStack"), exports);
@@ -66,6 +66,16 @@ var adapter_1 = require("./chrisapi/adapter");
 Object.defineProperty(exports, "listData_get", { enumerable: true, get: function () { return adapter_1.listData_get; } });
 Object.defineProperty(exports, "itemData_get", { enumerable: true, get: function () { return adapter_1.itemData_get; } });
 Object.defineProperty(exports, "items_get", { enumerable: true, get: function () { return adapter_1.items_get; } });
+// Typed wire contract over the hot API surfaces (jobs, PACS): downstream
+// packages call these instead of casting the opaque client per call site.
+var contract_1 = require("./chrisapi/contract");
+Object.defineProperty(exports, "feedsPage_get", { enumerable: true, get: function () { return contract_1.feedsPage_get; } });
+Object.defineProperty(exports, "publicFeedsPage_get", { enumerable: true, get: function () { return contract_1.publicFeedsPage_get; } });
+Object.defineProperty(exports, "pluginInstancesPage_get", { enumerable: true, get: function () { return contract_1.pluginInstancesPage_get; } });
+Object.defineProperty(exports, "pluginInstance_get", { enumerable: true, get: function () { return contract_1.pluginInstance_get; } });
+Object.defineProperty(exports, "pipeline_get", { enumerable: true, get: function () { return contract_1.pipeline_get; } });
+Object.defineProperty(exports, "pipelineSourceFilesPage_get", { enumerable: true, get: function () { return contract_1.pipelineSourceFilesPage_get; } });
+Object.defineProperty(exports, "downloadToken_create", { enumerable: true, get: function () { return contract_1.downloadToken_create; } });
 /**
  * Gets the ChRIS version from the given URL.
  *

package/dist/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";;AAEA;;;;;;;;GAQG;;;;;;;;;;;;;;;;;AA8EH,4CAKC;AAjFD,qCAAmB;AACnB,qDAAmC;AACnC,kDAAgC;AAChC,oDAAkC;AAClC,4DAA0C;AAC1C,yDAAuC;AACvC,yDAAuC;AACvC,mEAAiD;AACjD,6DAA2C;AAC3C,mDAAiC;AACjC,6DAA2C;AAC3C,iEAA+C;AAC/C,8DAA4C;AAC5C,yEAAuD;AACvD,iEAA+C;AAC/C,2DAAyC;AACzC,0DAAwC;AACxC,8DAA4C;AAC5C,+CAA6B;AAC7B,0CAAwB;AACxB,+CAA6B;AAC7B,kDAAgC;AAChC,qDAAmC;AACnC,iDAA+B;AAC/B,gDAA8B;AAC9B,mDAAiC;AACjC,0CAAwB;AACxB,mDAAiC;AACjC,4DAA0C;AAC1C,qDAAmC;AACnC,mDAAiC;AACjC,uDAAqC;AACrC,iEAA+C;AAC/C,6DAA2C;AAC3C,yDAAuC;AAEvC,iFAAiF;AACjF,8CAA2E;AAAlE,uGAAA,YAAY,OAAA;AAAE,uGAAA,YAAY,OAAA;AAAE,oGAAA,SAAS,OAAA;AAiC9C;;;;;GAKG;AACI,KAAK,UAAU,gBAAgB,CAAC,GAAW;IAChD,MAAM,OAAO,GAAW,OAAO,CAAC;IAChC,wCAAwC;IACxC,6CAA6C;IAC7C,OAAO,OAAO,CAAC;AACjB,CAAC;AAED;;GAEG;AACH,KAAK,UAAU,IAAI;IACjB,OAAO,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC;AAC5B,CAAC;AAED,gEAAgE;AAChE,qCAAqC;AACrC,IAAI,OAAO,CAAC,IAAI,KAAK,MAAM,EAAE,CAAC;IAC5B,IAAI,EAAE,CAAC,KAAK,CAAC,CAAC,KAAK,EAAE,EAAE;QACrB,OAAO,CAAC,KAAK,CAAC,oBAAoB,EAAE,KAAK,CAAC,CAAC;QAC3C,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC,CAAC,CAAC;AACL,CAAC"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";;AAEA;;;;;;;;GAQG;;;;;;;;;;;;;;;;;AA0GH,4CAKC;AA7GD,qCAAmB;AACnB,qDAAmC;AACnC,kDAAgC;AAChC,oDAAkC;AAClC,4DAA0C;AAC1C,yDAAuC;AACvC,yDAAuC;AACvC,mEAAiD;AACjD,6DAA2C;AAC3C,mDAAiC;AACjC,6DAA2C;AAC3C,iEAA+C;AAC/C,8DAA4C;AAC5C,yEAAuD;AACvD,iEAA+C;AAC/C,2DAAyC;AACzC,0DAAwC;AACxC,8DAA4C;AAC5C,+CAA6B;AAC7B,0CAAwB;AACxB,+CAA6B;AAC7B,kDAAgC;AAChC,qDAAmC;AACnC,iDAA+B;AAC/B,gDAA8B;AAC9B,mDAAiC;AACjC,0CAAwB;AACxB,mDAAiC;AACjC,4DAA0C;AAC1C,qDAAmC;AACnC,mDAAiC;AACjC,uDAAqC;AACrC,iEAA+C;AAC/C,6DAA2C;AAC3C,yDAAuC;AAEvC,iFAAiF;AACjF,8CAA2E;AAAlE,uGAAA,YAAY,OAAA;AAAE,uGAAA,YAAY,OAAA;AAAE,oGAAA,SAAS,OAAA;AAE9C,yEAAyE;AACzE,0EAA0E;AAC1E,gDAQ6B;AAP3B,yGAAA,aAAa,OAAA;AACb,+GAAA,mBAAmB,OAAA;AACnB,mHAAA,uBAAuB,OAAA;AACvB,8GAAA,kBAAkB,OAAA;AAClB,wGAAA,YAAY,OAAA;AACZ,uHAAA,2BAA2B,OAAA;AAC3B,gHAAA,oBAAoB,OAAA;AAkDtB;;;;;GAKG;AACI,KAAK,UAAU,gBAAgB,CAAC,GAAW;IAChD,MAAM,OAAO,GAAW,OAAO,CAAC;IAChC,wCAAwC;IACxC,6CAA6C;IAC7C,OAAO,OAAO,CAAC;AACjB,CAAC;AAED;;GAEG;AACH,KAAK,UAAU,IAAI;IACjB,OAAO,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC;AAC5B,CAAC;AAED,gEAAgE;AAChE,qCAAqC;AACrC,IAAI,OAAO,CAAC,IAAI,KAAK,MAAM,EAAE,CAAC;IAC5B,IAAI,EAAE,CAAC,KAAK,CAAC,CAAC,KAAK,EAAE,EAAE;QACrB,OAAO,CAAC,KAAK,CAAC,oBAAoB,EAAE,KAAK,CAAC,CAAC;QAC3C,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC,CAAC,CAAC;AACL,CAAC"}

package/dist/io/chrisIO.d.ts

@@ -97,6 +97,21 @@ export declare class ChrisIO {
      * @returns Promise resolving to true on success, false on failure.
      */
     folder_moveByPath(srcPath: string, destPath: string): Promise<Result<boolean>>;
+    /**
+     * Deletes a folder (and its contents) addressed by path, waiting until the
+     * CUBE confirms it is gone.
+     *
+     * Deletion is asynchronous server-side (the DELETE is only accepted), so
+     * success is defined as the path no longer resolving within the timeout.
+     *
+     * @param path - The folder's CUBE path (leading slash optional).
+     * @param options - `timeoutMs` bounds the disappearance poll (default 10s).
+     * @returns Ok(true) when the folder is verifiably gone (or never existed),
+     *   Err on failure or timeout.
+     */
+    folder_deleteByPath(path: string, options?: {
+        timeoutMs?: number;
+    }): Promise<Result<boolean>>;
     /**
      * Moves (renames) a file in ChRIS by updating its path.
      * @param fileId - The file ID.

package/dist/io/chrisIO.js

@@ -99,8 +99,7 @@ class ChrisIO {
             // Fall through to the PACS collection.
         }
         try {
-            const pacsClient = client;
-            return await pacsClient.getPACSFile(fileId);
+            return await (0, adapter_js_1.resource_call)(client, 'getPACSFile', fileId);
         }
         catch {
             return null;
@@ -325,6 +324,47 @@ class ChrisIO {
             return (0, result_js_1.Err)();
         }
     }
+    /**
+     * Deletes a folder (and its contents) addressed by path, waiting until the
+     * CUBE confirms it is gone.
+     *
+     * Deletion is asynchronous server-side (the DELETE is only accepted), so
+     * success is defined as the path no longer resolving within the timeout.
+     *
+     * @param path - The folder's CUBE path (leading slash optional).
+     * @param options - `timeoutMs` bounds the disappearance poll (default 10s).
+     * @returns Ok(true) when the folder is verifiably gone (or never existed),
+     *   Err on failure or timeout.
+     */
+    async folder_deleteByPath(path, options = {}) {
+        const client = await this.client_get();
+        if (!client) {
+            errorStack_js_1.errorStack.stack_push("error", "ChRIS client is not initialized");
+            return (0, result_js_1.Err)();
+        }
+        const cleanPath = path.startsWith('/') ? path.slice(1) : path;
+        try {
+            const folder = await client.getFileBrowserFolderByPath(cleanPath);
+            if (!folder) {
+                return (0, result_js_1.Ok)(true);
+            }
+            await (0, adapter_js_1.resource_call)(folder, 'delete');
+            const deadline = Date.now() + (options.timeoutMs ?? 10000);
+            while (Date.now() < deadline) {
+                if (!(await client.getFileBrowserFolderByPath(cleanPath))) {
+                    return (0, result_js_1.Ok)(true);
+                }
+                await new Promise((resolve) => setTimeout(resolve, 500));
+            }
+            errorStack_js_1.errorStack.stack_push("error", `Folder ${cleanPath} still resolves after queued deletion`);
+            return (0, result_js_1.Err)();
+        }
+        catch (error) {
+            const errorMsg = error instanceof Error ? error.message : String(error);
+            errorStack_js_1.errorStack.stack_push("error", `Failed to delete folder ${cleanPath}: ${errorMsg}`);
+            return (0, result_js_1.Err)();
+        }
+    }
     /**
      * Moves (renames) a file in ChRIS by updating its path.
      * @param fileId - The file ID.
@@ -343,8 +383,15 @@ class ChrisIO {
                 errorStack_js_1.errorStack.stack_push("error", `File not found with ID ${fileId}`);
                 return (0, result_js_1.Err)();
             }
-            // chrisapi typings omit the path field, but API supports it for renames
-            await (0, adapter_js_1.resource_call)(userFile, 'put', { path: destPath });
+            // The rename field drifted across CUBE versions: newer servers take
+            // `upload_path`, older ones `path` (chrisapi types neither). Try the
+            // current name first and fall back for older CUBEs.
+            try {
+                await (0, adapter_js_1.resource_call)(userFile, 'put', { upload_path: destPath });
+            }
+            catch {
+                await (0, adapter_js_1.resource_call)(userFile, 'put', { path: destPath });
+            }
             return (0, result_js_1.Ok)(true);
         }
         catch (error) {

package/dist/io/chrisIO.js.map

@@ -1 +1 @@
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package/dist/pipelines/chrisPipeline.js

@@ -43,7 +43,7 @@ async function pipelines_list(search) {
         const result = await group.asset.resources_getAll(params);
         if (!result || !result.tableData)
             return (0, result_js_1.Ok)([]);
-        return (0, result_js_1.Ok)(result.tableData);
+        return (0, result_js_1.Ok)((0, adapter_js_1.listData_get)({ data: result.tableData }));
     }
     catch (error) {
         const msg = error instanceof Error ? error.message : String(error);

package/dist/pipelines/chrisPipeline.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@fnndsc/cumin",
-  "version": "3.9.0",
+  "version": "3.11.0",
   "description": "Utility library for ChILI and other ChRIS-related JavaScript applications",
   "repository": {
     "type": "git",