@fnndsc/cumin 3.11.0 → 3.12.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/chrisapi/contract.d.ts +50 -0
- package/dist/chrisapi/contract.js +42 -0
- package/dist/chrisapi/contract.js.map +1 -1
- package/dist/index.d.ts +3 -2
- package/dist/index.js +3 -1
- package/dist/index.js.map +1 -1
- package/dist/pacs/chrisPACS.js +8 -23
- package/dist/pacs/chrisPACS.js.map +1 -1
- package/dist/pacs/dicomPayload.d.ts +75 -0
- package/dist/pacs/dicomPayload.js +130 -0
- package/dist/pacs/dicomPayload.js.map +1 -0
- package/package.json +6 -1
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@@ -36,6 +36,56 @@ export interface ListPage<T> {
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data: T[];
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totalCount: number | null;
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}
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/**
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* Options controlling one paginated walk over a CUBE list.
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*
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* @property pageSize - Rows requested per page. Defaults to 100.
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* @property startOffset - Offset at which the walk begins. Defaults to 0; a
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* resumed walk passes the offset its previous attempt had reached.
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* @property startTotal - Server total already latched by a previous attempt,
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* or null when unknown. Defaults to null.
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*/
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export interface PageWalkOptions {
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pageSize?: number;
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startOffset?: number;
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startTotal?: number | null;
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}
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/**
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* One yielded step of a paginated walk.
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*
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* @property items - The rows of this page, in server order. May be empty on
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* the final step.
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* @property offset - Offset at which this page was fetched.
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* @property total - The latched server total, or null while the server has
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* not reported one. A null total means "unknown", not zero.
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*/
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export interface PageWalkStep<T> {
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items: T[];
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offset: number;
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total: number | null;
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}
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/**
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* Walks every page of a paginated CUBE list, yielding one step per page.
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*
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* This is the one pagination loop: it owns offset advancement, total
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* latching, and termination, so callers only consume rows. The walk ends
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* when a page comes back empty, when the latched total has been reached, or
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* when a short page arrives while the total is still unknown. Fetch errors
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* propagate to the caller; a resumed walk continues from `startOffset`.
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*
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* @param page_fetch - Fetches one page at the given offset and limit.
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* @param options - Page size and resume position. See PageWalkOptions.
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* @returns Async generator yielding a PageWalkStep per fetched page.
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*
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* @example
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* ```
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* for await (const step of listPages_walk((offset, limit) =>
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* feedsPage_get(client, { limit, offset }))) {
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* for (const feed of step.items) index.set(feed.id, feed);
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* }
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* ```
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*/
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export declare function listPages_walk<T>(page_fetch: (offset: number, limit: number) => Promise<ListPage<T>>, options?: PageWalkOptions): AsyncGenerator<PageWalkStep<T>, void, void>;
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/**
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* Wire shape of one CUBE feed row, as served by the feeds list endpoints.
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*
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@@ -25,6 +25,7 @@
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* @module
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*/
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.listPages_walk = listPages_walk;
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exports.feedsPage_get = feedsPage_get;
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exports.publicFeedsPage_get = publicFeedsPage_get;
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exports.pluginInstancesPage_get = pluginInstancesPage_get;
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@@ -33,6 +34,47 @@ exports.pipeline_get = pipeline_get;
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exports.pipelineSourceFilesPage_get = pipelineSourceFilesPage_get;
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exports.downloadToken_create = downloadToken_create;
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const adapter_1 = require("./adapter");
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/**
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* Walks every page of a paginated CUBE list, yielding one step per page.
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*
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* This is the one pagination loop: it owns offset advancement, total
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* latching, and termination, so callers only consume rows. The walk ends
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* when a page comes back empty, when the latched total has been reached, or
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* when a short page arrives while the total is still unknown. Fetch errors
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* propagate to the caller; a resumed walk continues from `startOffset`.
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*
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* @param page_fetch - Fetches one page at the given offset and limit.
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* @param options - Page size and resume position. See PageWalkOptions.
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* @returns Async generator yielding a PageWalkStep per fetched page.
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*
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* @example
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* ```
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* for await (const step of listPages_walk((offset, limit) =>
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* feedsPage_get(client, { limit, offset }))) {
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* for (const feed of step.items) index.set(feed.id, feed);
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* }
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* ```
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*/
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async function* listPages_walk(page_fetch, options = {}) {
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const pageSize = options.pageSize ?? 100;
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let offset = options.startOffset ?? 0;
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let total = options.startTotal ?? null;
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while (true) {
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const page = await page_fetch(offset, pageSize);
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const items = page.data;
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if (total === null && page.totalCount !== null) {
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total = page.totalCount;
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}
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yield { items, offset, total };
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if (items.length === 0)
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return;
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if (total !== null && offset + items.length >= total)
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return;
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if (total === null && items.length < pageSize)
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return;
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offset += items.length;
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}
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}
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/**
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* Normalizes a raw chrisapi list response into a typed ListPage.
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*
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"contract.js","sourceRoot":"","sources":["../../src/chrisapi/contract.ts"],"names":[],"mappings":";AAAA;;;;;;;;;;;;;;;;;;;;;;;;GAwBG;;
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{"version":3,"file":"contract.js","sourceRoot":"","sources":["../../src/chrisapi/contract.ts"],"names":[],"mappings":";AAAA;;;;;;;;;;;;;;;;;;;;;;;;GAwBG;;AA2EH,wCAoBC;AAgJD,sCAKC;AAWD,kDAMC;AAUD,0DAOC;AAUD,gDAuCC;AAqLD,oCA4CC;AAUD,kEAOC;AASD,oDAQC;AAxkBD,uCAOmB;AA6CnB;;;;;;;;;;;;;;;;;;;;GAoBG;AACI,KAAK,SAAS,CAAC,CAAC,cAAc,CACnC,UAAmE,EACnE,UAA2B,EAAE;IAE7B,MAAM,QAAQ,GAAW,OAAO,CAAC,QAAQ,IAAI,GAAG,CAAC;IACjD,IAAI,MAAM,GAAW,OAAO,CAAC,WAAW,IAAI,CAAC,CAAC;IAC9C,IAAI,KAAK,GAAkB,OAAO,CAAC,UAAU,IAAI,IAAI,CAAC;IAEtD,OAAO,IAAI,EAAE,CAAC;QACZ,MAAM,IAAI,GAAgB,MAAM,UAAU,CAAC,MAAM,EAAE,QAAQ,CAAC,CAAC;QAC7D,MAAM,KAAK,GAAQ,IAAI,CAAC,IAAI,CAAC;QAC7B,IAAI,KAAK,KAAK,IAAI,IAAI,IAAI,CAAC,UAAU,KAAK,IAAI,EAAE,CAAC;YAC/C,KAAK,GAAG,IAAI,CAAC,UAAU,CAAC;QAC1B,CAAC;QACD,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,CAAC;QAC/B,IAAI,KAAK,CAAC,MAAM,KAAK,CAAC;YAAE,OAAO;QAC/B,IAAI,KAAK,KAAK,IAAI,IAAI,MAAM,GAAG,KAAK,CAAC,MAAM,IAAI,KAAK;YAAE,OAAO;QAC7D,IAAI,KAAK,KAAK,IAAI,IAAI,KAAK,CAAC,MAAM,GAAG,QAAQ;YAAE,OAAO;QACtD,MAAM,IAAI,KAAK,CAAC,MAAM,CAAC;IACzB,CAAC;AACH,CAAC;AA0HD;;;;;GAKG;AACH,SAAS,aAAa,CAAI,IAAiC;IACzD,MAAM,KAAK,GAAY,IAAI,EAAE,UAAU,CAAC;IACxC,OAAO;QACL,IAAI,EAAE,IAAA,sBAAY,EAAI,IAAI,IAAI,SAAS,CAAC;QACxC,UAAU,EAAE,OAAO,KAAK,KAAK,QAAQ,IAAI,KAAK,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI;KACnE,CAAC;AACJ,CAAC;AAED;;;;;;;GAOG;AACI,KAAK,UAAU,aAAa,CACjC,MAAc,EACd,MAA+B;IAE/B,OAAO,aAAa,CAAW,MAAM,IAAA,uBAAa,EAAW,MAAM,EAAE,UAAU,EAAE,MAAM,CAAC,CAAC,CAAC;AAC5F,CAAC;AAED;;;;;;;;GAQG;AACI,KAAK,UAAU,mBAAmB,CACvC,MAAc,EACd,MAA+B;IAE/B,IAAI,CAAC,IAAA,uBAAa,EAAC,MAAM,EAAE,gBAAgB,CAAC;QAAE,OAAO,IAAI,CAAC;IAC1D,OAAO,aAAa,CAAW,MAAM,IAAA,uBAAa,EAAW,MAAM,EAAE,gBAAgB,EAAE,MAAM,CAAC,CAAC,CAAC;AAClG,CAAC;AAED;;;;;;;GAOG;AACI,KAAK,UAAU,uBAAuB,CAC3C,MAAc,EACd,MAA+B;IAE/B,OAAO,aAAa,CAClB,MAAM,IAAA,uBAAa,EAAW,MAAM,EAAE,oBAAoB,EAAE,MAAM,CAAC,CACpE,CAAC;AACJ,CAAC;AAED;;;;;;;GAOG;AACI,KAAK,UAAU,kBAAkB,CACtC,MAAc,EACd,UAAkB;IAElB,MAAM,QAAQ,GAA8B,MAAM,IAAA,uBAAa,EAC7D,MAAM,EACN,mBAAmB,EACnB,UAAU,CACX,CAAC;IACF,IAAI,CAAC,QAAQ;QAAE,OAAO,IAAI,CAAC;IAC3B,MAAM,IAAI,GAA8B,IAAA,sBAAY,EAAqB,QAAQ,CAAC,CAAC;IAEnF,OAAO;QACL,IAAI;QAEJ,KAAK,CAAC,kBAAkB,CACtB,MAAyC;YAEzC,2EAA2E;YAC3E,OAAO,qBAAqB,CAC1B,MAAM,IAAA,uBAAa,EAAW,QAAQ,EAAE,eAAe,EAAE,MAAM,CAAC,CACjE,CAAC;QACJ,CAAC;QAED,KAAK,CAAC,UAAU,CAAC,MAAc;YAC7B,MAAM,IAAA,uBAAa,EAAU,QAAQ,EAAE,KAAK,EAAE,EAAE,MAAM,EAAE,CAAC,CAAC;QAC5D,CAAC;QAED,KAAK,CAAC,MAAM;YACV,MAAM,IAAA,uBAAa,EAAU,QAAQ,EAAE,QAAQ,CAAC,CAAC;QACnD,CAAC;QAED,KAAK,CAAC,QAAQ;YACZ,IAAI,CAAC,IAAA,uBAAa,EAAC,QAAQ,EAAE,SAAS,CAAC;gBAAE,OAAO,IAAI,CAAC;YACrD,MAAM,IAAI,GAAuB,MAAM,IAAA,uBAAa,EAAqB,QAAQ,EAAE,SAAS,CAAC,CAAC;YAC9F,MAAM,IAAI,GAA6B,IAAA,sBAAY,EAAoB,IAAI,CAAC,CAAC;YAC7E,OAAO,IAAI,CAAC,GAAG,CAAC,CAAC,GAAsB,EAAU,EAAE,CAAC,CAAC,OAAO,GAAG,CAAC,GAAG,KAAK,QAAQ,CAAC,CAAC,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;QAC/G,CAAC;KACF,CAAC;AACJ,CAAC;AAsID;;;;;;GAMG;AACH,SAAS,qBAAqB,CAAI,IAAiC;IACjE,IAAI,KAAK,CAAC,OAAO,CAAC,IAAI,EAAE,IAAI,CAAC,IAAI,OAAO,IAAI,EAAE,QAAQ,KAAK,UAAU,EAAE,CAAC;QACtE,OAAO,aAAa,CAAI,IAAI,CAAC,CAAC;IAChC,CAAC;IACD,MAAM,IAAI,GAAQ,IAAA,mBAAS,EAAqB,IAA+B,CAAC;SAC7E,GAAG,CAAC,CAAC,IAAwB,EAAY,EAAE,CAAC,IAAA,sBAAY,EAAI,IAAI,CAAC,CAAC;SAClE,MAAM,CAAC,CAAC,GAAa,EAAY,EAAE,CAAC,GAAG,KAAK,IAAI,CAAC,CAAC;IACrD,MAAM,KAAK,GAAY,IAAI,EAAE,UAAU,CAAC;IACxC,OAAO,EAAE,IAAI,EAAE,IAAI,EAAE,UAAU,EAAE,OAAO,KAAK,KAAK,QAAQ,IAAI,KAAK,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI,EAAE,CAAC;AAC5F,CAAC;AAED;;;;;GAKG;AACH,SAAS,iBAAiB,CAAC,QAAgB;IACzC,OAAO;QACL,KAAK,CAAC,kBAAkB,CAAC,MAA+B;YACtD,OAAO,qBAAqB,CAC1B,MAAM,IAAA,uBAAa,EAAW,QAAQ,EAAE,qBAAqB,EAAE,MAAM,CAAC,CACvE,CAAC;QACJ,CAAC;QACD,KAAK,CAAC,wBAAwB,CAAC,MAA+B;YAC5D,OAAO,qBAAqB,CAC1B,MAAM,IAAA,uBAAa,EAAW,QAAQ,EAAE,2BAA2B,EAAE,MAAM,CAAC,CAC7E,CAAC;QACJ,CAAC;KACF,CAAC;AACJ,CAAC;AAED;;;;;;;GAOG;AACI,KAAK,UAAU,YAAY,CAChC,MAAc,EACd,UAAkB;IAElB,MAAM,QAAQ,GAA8B,MAAM,IAAA,uBAAa,EAC7D,MAAM,EACN,aAAa,EACb,UAAU,CACX,CAAC;IACF,IAAI,CAAC,QAAQ;QAAE,OAAO,IAAI,CAAC;IAE3B,OAAO;QACL,IAAI,EAAE,IAAA,sBAAY,EAAiB,QAAQ,CAAC;QAE5C,KAAK,CAAC,iBAAiB,CAAC,MAA+B;YACrD,MAAM,IAAI,GAAa,MAAM,IAAA,uBAAa,EAAW,QAAQ,EAAE,kBAAkB,EAAE,MAAM,CAAC,CAAC;YAC3F,MAAM,QAAQ,GACZ,OAAO,IAAI,EAAE,QAAQ,KAAK,UAAU;gBAClC,CAAC,CAAC,IAAA,mBAAS,EAAqB,IAA+B,CAAC;gBAChE,CAAC,CAAC,IAAA,sBAAY,EAAmB,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC,GAAqB,EAAsB,EAAE,CAAC,CAAC,EAAE,IAAI,EAAE,GAAG,EAAE,CAAC,CAAC,CAAC;YAC/G,OAAO,QAAQ;iBACZ,GAAG,CAAC,CAAC,IAAwB,EAA2B,EAAE;gBACzD,MAAM,IAAI,GAA4B,IAAA,sBAAY,EAAmB,IAAI,CAAC,CAAC;gBAC3E,IAAI,CAAC,IAAI;oBAAE,OAAO,IAAI,CAAC;gBACvB,OAAO;oBACL,IAAI;oBACJ,KAAK,CAAC,UAAU;wBACd,IAAI,CAAC,IAAA,uBAAa,EAAC,IAAI,EAAE,WAAW,CAAC;4BAAE,OAAO,IAAI,CAAC;wBACnD,MAAM,MAAM,GAAkB,MAAM,IAAA,uBAAa,EAAgB,IAAI,EAAE,WAAW,CAAC,CAAC;wBACpF,OAAO,MAAM,CAAC,CAAC,CAAC,iBAAiB,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;oBACnD,CAAC;iBACF,CAAC;YACJ,CAAC,CAAC;iBACD,MAAM,CAAC,CAAC,IAA6B,EAA4B,EAAE,CAAC,IAAI,KAAK,IAAI,CAAC,CAAC;QACxF,CAAC;QAED,KAAK,CAAC,yBAAyB,CAC7B,MAA+B;YAE/B,OAAO,qBAAqB,CAC1B,MAAM,IAAA,uBAAa,EAAW,QAAQ,EAAE,sBAAsB,EAAE,MAAM,CAAC,CACxE,CAAC;QACJ,CAAC;KACF,CAAC;AACJ,CAAC;AAED;;;;;;;GAOG;AACI,KAAK,UAAU,2BAA2B,CAC/C,MAAc,EACd,MAA+B;IAE/B,OAAO,qBAAqB,CAC1B,MAAM,IAAA,uBAAa,EAAW,MAAM,EAAE,wBAAwB,EAAE,MAAM,CAAC,CACxE,CAAC;AACJ,CAAC;AAED;;;;;;GAMG;AACI,KAAK,UAAU,oBAAoB,CAAC,MAAc;IACvD,MAAM,QAAQ,GACZ,MAAM,IAAA,uBAAa,EAAoC,MAAM,EAAE,qBAAqB,CAAC,CAAC;IACxF,MAAM,IAAI,GAA+B,IAAA,sBAAY,EAAsB,QAAQ,CAAC,CAAC;IACrF,OAAO;QACL,KAAK,EAAE,MAAM,CAAC,IAAI,EAAE,KAAK,IAAI,EAAE,CAAC;QAChC,GAAG,EAAE,MAAM,CAAC,QAAQ,EAAE,GAAG,IAAI,EAAE,CAAC;KACjC,CAAC;AACJ,CAAC"}
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package/dist/index.d.ts
CHANGED
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export * from "./plugins/chrisPluginMetaPlugins";
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export * from "./compute/computeResources";
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export * from "./pacs/chrisPACS";
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export * from "./pacs/dicomPayload";
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export * from "./resources/chrisResources";
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export * from "./resources/chrisResourceGroup";
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export * from "./resources/chrisObjContext";
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export * from "./workflows/chrisWorkflows";
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export * from "./output/runtimeOutput";
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export { listData_get, itemData_get, items_get } from "./chrisapi/adapter";
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export { feedsPage_get, publicFeedsPage_get, pluginInstancesPage_get, pluginInstance_get, pipeline_get, pipelineSourceFilesPage_get, downloadToken_create, } from "./chrisapi/contract";
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export type { ListPage, FeedData, PluginInstanceData, InstanceParameterData, DownloadToken, PluginInstanceHandle, PipelineHandle, PluginPipingItem, PluginPipingData, PipingDefaultParameterData, PipelineSourceFileData, PluginParameterData, ComputeResourceData, PluginHandle, } from "./chrisapi/contract";
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export { feedsPage_get, publicFeedsPage_get, pluginInstancesPage_get, pluginInstance_get, pipeline_get, pipelineSourceFilesPage_get, downloadToken_create, listPages_walk, } from "./chrisapi/contract";
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export type { ListPage, PageWalkOptions, PageWalkStep, FeedData, PluginInstanceData, InstanceParameterData, DownloadToken, PluginInstanceHandle, PipelineHandle, PluginPipingItem, PluginPipingData, PipingDefaultParameterData, PipelineSourceFileData, PluginParameterData, ComputeResourceData, PluginHandle, } from "./chrisapi/contract";
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export type { ListResource, Resource, ItemResource, PluginInstance, Feed, FileBrowserFolder, UserFile, PACSFile, } from "./chrisapi/adapter";
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/**
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* Shape of a single node (file, directory, or link) in a ChRIS path listing.
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package/dist/index.js
CHANGED
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for (var p in m) if (p !== "default" && !Object.prototype.hasOwnProperty.call(exports, p)) __createBinding(exports, m, p);
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};
|
|
26
26
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
27
|
-
exports.downloadToken_create = exports.pipelineSourceFilesPage_get = exports.pipeline_get = exports.pluginInstance_get = exports.pluginInstancesPage_get = exports.publicFeedsPage_get = exports.feedsPage_get = exports.items_get = exports.itemData_get = exports.listData_get = void 0;
|
|
27
|
+
exports.listPages_walk = exports.downloadToken_create = exports.pipelineSourceFilesPage_get = exports.pipeline_get = exports.pluginInstance_get = exports.pluginInstancesPage_get = exports.publicFeedsPage_get = exports.feedsPage_get = exports.items_get = exports.itemData_get = exports.listData_get = void 0;
|
|
28
28
|
exports.chrisVersion_get = chrisVersion_get;
|
|
29
29
|
__exportStar(require("./"), exports);
|
|
30
30
|
__exportStar(require("./error/errorStack"), exports);
|
|
@@ -36,6 +36,7 @@ __exportStar(require("./plugins/chrisPlugins"), exports);
|
|
|
36
36
|
__exportStar(require("./plugins/chrisPluginMetaPlugins"), exports);
|
|
37
37
|
__exportStar(require("./compute/computeResources"), exports);
|
|
38
38
|
__exportStar(require("./pacs/chrisPACS"), exports);
|
|
39
|
+
__exportStar(require("./pacs/dicomPayload"), exports);
|
|
39
40
|
__exportStar(require("./resources/chrisResources"), exports);
|
|
40
41
|
__exportStar(require("./resources/chrisResourceGroup"), exports);
|
|
41
42
|
__exportStar(require("./resources/chrisObjContext"), exports);
|
|
@@ -76,6 +77,7 @@ Object.defineProperty(exports, "pluginInstance_get", { enumerable: true, get: fu
|
|
|
76
77
|
Object.defineProperty(exports, "pipeline_get", { enumerable: true, get: function () { return contract_1.pipeline_get; } });
|
|
77
78
|
Object.defineProperty(exports, "pipelineSourceFilesPage_get", { enumerable: true, get: function () { return contract_1.pipelineSourceFilesPage_get; } });
|
|
78
79
|
Object.defineProperty(exports, "downloadToken_create", { enumerable: true, get: function () { return contract_1.downloadToken_create; } });
|
|
80
|
+
Object.defineProperty(exports, "listPages_walk", { enumerable: true, get: function () { return contract_1.listPages_walk; } });
|
|
79
81
|
/**
|
|
80
82
|
* Gets the ChRIS version from the given URL.
|
|
81
83
|
*
|
package/dist/index.js.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";;AAEA;;;;;;;;GAQG;;;;;;;;;;;;;;;;;
|
|
1
|
+
{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";;AAEA;;;;;;;;GAQG;;;;;;;;;;;;;;;;;AA8GH,4CAKC;AAjHD,qCAAmB;AACnB,qDAAmC;AACnC,kDAAgC;AAChC,oDAAkC;AAClC,4DAA0C;AAC1C,yDAAuC;AACvC,yDAAuC;AACvC,mEAAiD;AACjD,6DAA2C;AAC3C,mDAAiC;AACjC,sDAAoC;AACpC,6DAA2C;AAC3C,iEAA+C;AAC/C,8DAA4C;AAC5C,yEAAuD;AACvD,iEAA+C;AAC/C,2DAAyC;AACzC,0DAAwC;AACxC,8DAA4C;AAC5C,+CAA6B;AAC7B,0CAAwB;AACxB,+CAA6B;AAC7B,kDAAgC;AAChC,qDAAmC;AACnC,iDAA+B;AAC/B,gDAA8B;AAC9B,mDAAiC;AACjC,0CAAwB;AACxB,mDAAiC;AACjC,4DAA0C;AAC1C,qDAAmC;AACnC,mDAAiC;AACjC,uDAAqC;AACrC,iEAA+C;AAC/C,6DAA2C;AAC3C,yDAAuC;AAEvC,iFAAiF;AACjF,8CAA2E;AAAlE,uGAAA,YAAY,OAAA;AAAE,uGAAA,YAAY,OAAA;AAAE,oGAAA,SAAS,OAAA;AAE9C,yEAAyE;AACzE,0EAA0E;AAC1E,gDAS6B;AAR3B,yGAAA,aAAa,OAAA;AACb,+GAAA,mBAAmB,OAAA;AACnB,mHAAA,uBAAuB,OAAA;AACvB,8GAAA,kBAAkB,OAAA;AAClB,wGAAA,YAAY,OAAA;AACZ,uHAAA,2BAA2B,OAAA;AAC3B,gHAAA,oBAAoB,OAAA;AACpB,0GAAA,cAAc,OAAA;AAoDhB;;;;;GAKG;AACI,KAAK,UAAU,gBAAgB,CAAC,GAAW;IAChD,MAAM,OAAO,GAAW,OAAO,CAAC;IAChC,wCAAwC;IACxC,6CAA6C;IAC7C,OAAO,OAAO,CAAC;AACjB,CAAC;AAED;;GAEG;AACH,KAAK,UAAU,IAAI;IACjB,OAAO,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC;AAC5B,CAAC;AAED,gEAAgE;AAChE,qCAAqC;AACrC,IAAI,OAAO,CAAC,IAAI,KAAK,MAAM,EAAE,CAAC;IAC5B,IAAI,EAAE,CAAC,KAAK,CAAC,CAAC,KAAK,EAAE,EAAE;QACrB,OAAO,CAAC,KAAK,CAAC,oBAAoB,EAAE,KAAK,CAAC,CAAC;QAC3C,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC,CAAC,CAAC;AACL,CAAC"}
|
package/dist/pacs/chrisPACS.js
CHANGED
|
@@ -28,6 +28,7 @@ const retry_js_1 = require("../utils/retry.js");
|
|
|
28
28
|
const chrisResourceGroup_js_1 = require("../resources/chrisResourceGroup.js");
|
|
29
29
|
const adapter_js_1 = require("../chrisapi/adapter.js");
|
|
30
30
|
const chrisConnection_js_1 = require("../connect/chrisConnection.js");
|
|
31
|
+
const dicomPayload_js_1 = require("./dicomPayload.js");
|
|
31
32
|
const zlib_1 = __importDefault(require("zlib"));
|
|
32
33
|
/**
|
|
33
34
|
* Group handler for PACS servers.
|
|
@@ -436,19 +437,6 @@ async function seriesStorage_resolve(seriesInstanceUID, retry) {
|
|
|
436
437
|
return (0, result_js_1.Ok)(empty); // Return the empty state rather than failing the whole operation
|
|
437
438
|
}
|
|
438
439
|
}
|
|
439
|
-
/**
|
|
440
|
-
* Extract value from a DICOM tag object or return as-is.
|
|
441
|
-
*
|
|
442
|
-
* @param val - Potentially a tag object with {label, value} or a primitive.
|
|
443
|
-
* @returns The extracted value.
|
|
444
|
-
*/
|
|
445
|
-
function tag_extractValue(val) {
|
|
446
|
-
if (val && typeof val === "object" && "value" in val) {
|
|
447
|
-
const tagObj = val;
|
|
448
|
-
return tagObj.value;
|
|
449
|
-
}
|
|
450
|
-
return val;
|
|
451
|
-
}
|
|
452
440
|
/**
|
|
453
441
|
* Determine series status based on file counts.
|
|
454
442
|
*
|
|
@@ -478,29 +466,26 @@ async function retrieve_latestFromQuery(queryId) {
|
|
|
478
466
|
async function studySeries_buildStatus(study) {
|
|
479
467
|
const studyStatus = {
|
|
480
468
|
studyInfo: study,
|
|
481
|
-
studyInstanceUID:
|
|
482
|
-
studyDescription:
|
|
469
|
+
studyInstanceUID: (0, dicomPayload_js_1.tag_extractRaw)(study.StudyInstanceUID),
|
|
470
|
+
studyDescription: (0, dicomPayload_js_1.tag_extractRaw)(study.StudyDescription),
|
|
483
471
|
series: [],
|
|
484
472
|
};
|
|
485
|
-
const seriesArray =
|
|
486
|
-
Array.isArray(study.Series) ? study.Series :
|
|
487
|
-
Array.isArray(study.results) ? study.results :
|
|
488
|
-
[];
|
|
473
|
+
const seriesArray = (0, dicomPayload_js_1.series_extractFromStudy)(study);
|
|
489
474
|
for (const seriesObj of seriesArray) {
|
|
490
475
|
if (!seriesObj || typeof seriesObj !== "object")
|
|
491
476
|
continue;
|
|
492
477
|
const series = seriesObj;
|
|
493
|
-
const seriesUID =
|
|
478
|
+
const seriesUID = (0, dicomPayload_js_1.tag_extractRaw)(series.SeriesInstanceUID);
|
|
494
479
|
if (!seriesUID)
|
|
495
480
|
continue;
|
|
496
|
-
const expectedFiles = Number(
|
|
481
|
+
const expectedFiles = Number((0, dicomPayload_js_1.tag_extractRaw)(series.NumberOfSeriesRelatedInstances)) || 0;
|
|
497
482
|
const storageResult = await seriesStorage_resolve(seriesUID);
|
|
498
483
|
const storage = storageResult.ok ? storageResult.value : { fileCount: 0, folderPath: null };
|
|
499
484
|
const status = series_determineStatus(expectedFiles, storage.fileCount);
|
|
500
485
|
studyStatus.series.push({
|
|
501
486
|
seriesInfo: series,
|
|
502
487
|
seriesInstanceUID: seriesUID,
|
|
503
|
-
seriesDescription:
|
|
488
|
+
seriesDescription: (0, dicomPayload_js_1.tag_extractRaw)(series.SeriesDescription),
|
|
504
489
|
expectedFiles,
|
|
505
490
|
actualFiles: storage.fileCount,
|
|
506
491
|
status,
|
|
@@ -526,7 +511,7 @@ async function pacsRetrieve_statusForQuery(queryId) {
|
|
|
526
511
|
return (0, result_js_1.Err)();
|
|
527
512
|
}
|
|
528
513
|
const { retrieveStatus, retrieveId } = await retrieve_latestFromQuery(queryId);
|
|
529
|
-
const payloadArray =
|
|
514
|
+
const payloadArray = (0, dicomPayload_js_1.studies_extractFromDecoded)(decoded.json);
|
|
530
515
|
const studies = [];
|
|
531
516
|
for (const obj of payloadArray) {
|
|
532
517
|
if (!obj || typeof obj !== "object")
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"chrisPACS.js","sourceRoot":"","sources":["../../src/pacs/chrisPACS.ts"],"names":[],"mappings":";AAAA;;;;;;GAMG;;;;;;AA2HH,gDA0CC;AAQD,4CAkCC;AAQD,4CAaC;AAmBD,gDA+BC;AAoBD,wDAkEC;AAQD,sCAyBC;AA6BD,kDAwBC;AASD,gDAiCC;AAQD,kDA8BC;AA2DD,sDAsDC;AAgGD,kEA4BC;AA7vBD,0DAAoD;AACpD,kDAAqD;AACrD,gDAAqD;AACrD,8EAAwE;AAExE,uDAOgC;AAChC,sEAAgE;AAChE,gDAAwB;AA6BxB;;GAEG;AACH,MAAa,cAAe,SAAQ,0CAAkB;IACpD;QACE,KAAK,CAAC,MAAM,EAAE,aAAa,CAAC,CAAC;IAC/B,CAAC;CACF;AAJD,wCAIC;AAwDD;;GAEG;AACH,MAAa,mBAAoB,SAAQ,0CAAkB;IACzD;QACE,KAAK,CAAC,aAAa,EAAE,gBAAgB,CAAC,CAAC;IACzC,CAAC;CACF;AAJD,kDAIC;AAED;;;;;GAKG;AACI,KAAK,UAAU,kBAAkB,CACtC,UAAkB;IAElB,MAAM,MAAM,GAAkB,MAAM,oCAAe,CAAC,UAAU,EAAE,CAAC;IACjE,IAAI,CAAC,MAAM,EAAE,CAAC;QACZ,0BAAU,CAAC,UAAU,CAAC,OAAO,EAAE,wCAAwC,CAAC,CAAC;QACzE,OAAO,IAAA,eAAG,GAAE,CAAC;IACf,CAAC;IAED,IAAI,OAAO,CAAC,IAAI,CAAC,UAAU,CAAC,EAAE,CAAC;QAC7B,MAAM,EAAE,GAAW,MAAM,CAAC,UAAU,CAAC,CAAC;QACtC,OAAO,IAAA,cAAE,EAAC,EAAE,EAAE,EAAE,UAAU,EAAE,SAAS,EAAE,CAAC,CAAC;IAC3C,CAAC;IAED,IAAI,CAAC;QACH,MAAM,IAAI,GAAmD,MAAM,MAAM,CAAC,WAAW,CAAC;YACpF,UAAU,EAAE,UAAU;YACtB,KAAK,EAAE,CAAC;SACT,CAAC,CAAC;QACH,MAAM,OAAO,GAAiB,IAAA,yBAAY,EAAa,IAAI,CAAC,CAAC;QAC7D,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YACzB,MAAM,KAAK,GAAe,OAAO,CAAC,CAAC,CAAC,CAAC;YACrC,OAAO,IAAA,cAAE,EAAC,EAAE,EAAE,EAAE,KAAK,CAAC,EAAE,EAAE,UAAU,EAAE,KAAK,CAAC,UAAU,EAAE,CAAC,CAAC;QAC5D,CAAC;QACD,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YACzB,0BAAU,CAAC,UAAU,CAAC,OAAO,EAAE,6BAA6B,UAAU,IAAI,CAAC,CAAC;YAC5E,OAAO,IAAA,eAAG,GAAE,CAAC;QACf,CAAC;QACD,0BAAU,CAAC,UAAU,CACnB,OAAO,EACP,kCAAkC,UAAU,+CAA+C,CAC5F,CAAC;QACF,OAAO,IAAA,eAAG,GAAE,CAAC;IACf,CAAC;IAAC,OAAO,KAAc,EAAE,CAAC;QACxB,MAAM,YAAY,GAChB,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;QACzD,0BAAU,CAAC,UAAU,CACnB,OAAO,EACP,kCAAkC,UAAU,MAAM,YAAY,EAAE,CACjE,CAAC;QACF,OAAO,IAAA,eAAG,GAAE,CAAC;IACf,CAAC;AACH,CAAC;AAED;;;;;GAKG;AACI,KAAK,UAAU,gBAAgB,CACpC,UAAiC,EAAE;IAEnC,IAAI,CAAC;QACH,MAAM,KAAK,GAAmB,IAAI,cAAc,EAAE,CAAC;QACnD,MAAM,eAAe,GAAY,MAAM,KAAK,CAAC,UAAU,EAAE,CAAC;QAC1D,IAAI,CAAC,eAAe,EAAE,CAAC;YACrB,0BAAU,CAAC,UAAU,CAAC,OAAO,EAAE,wCAAwC,CAAC,CAAC;YACzE,OAAO,IAAA,eAAG,GAAE,CAAC;QACf,CAAC;QAED,MAAM,WAAW,GAAgB,OAAsB,CAAC;QACxD,MAAM,QAAQ,GAAgC,MAAM,KAAK,CAAC,KAAK,CAAC,gBAAgB,CAC9E,WAAW,CACZ,CAAC;QAEF,IAAI,CAAC,QAAQ,IAAI,CAAC,QAAQ,CAAC,SAAS,EAAE,CAAC;YACrC,OAAO,IAAA,cAAE,EAAC,EAAE,CAAC,CAAC;QAChB,CAAC;QAED,MAAM,OAAO,GAAiB,QAAQ,CAAC,SAAS,CAAC,GAAG,CAClD,CAAC,GAA4B,EAAc,EAAE,CAAC,CAAC;YAC7C,EAAE,EAAE,OAAO,GAAG,CAAC,EAAE,KAAK,QAAQ,CAAC,CAAC,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC,CAAC,MAAM,CAAC,GAAG,CAAC,EAAE,CAAC;YACxD,UAAU,EAAG,GAAG,CAAC,UAAqB,IAAK,GAAG,CAAC,IAAe,IAAI,SAAS;YAC3E,IAAI,EAAG,GAAG,CAAC,IAAe,IAAI,SAAS;YACvC,WAAW,EAAG,GAAG,CAAC,WAAsB,IAAI,SAAS;SACtD,CAAC,CACH,CAAC;QACF,OAAO,IAAA,cAAE,EAAC,OAAO,CAAC,CAAC;IACrB,CAAC;IAAC,OAAO,KAAc,EAAE,CAAC;QACxB,MAAM,YAAY,GAAW,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;QACpF,0BAAU,CAAC,UAAU,CAAC,OAAO,EAAE,gCAAgC,YAAY,EAAE,CAAC,CAAC;QAC/E,OAAO,IAAA,eAAG,GAAE,CAAC;IACf,CAAC;AACH,CAAC;AAED;;;;;GAKG;AACI,KAAK,UAAU,gBAAgB,CACpC,UAAgC,EAAE;IAElC,IAAI,CAAC;QACH,MAAM,KAAK,GAAwB,IAAI,mBAAmB,EAAE,CAAC;QAC7D,MAAM,QAAQ,GACZ,MAAM,KAAK,CAAC,KAAK,CAAC,gCAAgC,CAAC,OAAO,CAAC,CAAC;QAC9D,OAAO,IAAA,cAAE,EAAC,QAAQ,CAAC,CAAC;IACtB,CAAC;IAAC,OAAO,KAAc,EAAE,CAAC;QACxB,MAAM,YAAY,GAAW,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;QACpF,0BAAU,CAAC,UAAU,CAAC,OAAO,EAAE,gCAAgC,YAAY,EAAE,CAAC,CAAC;QAC/E,OAAO,IAAA,eAAG,GAAE,CAAC;IACf,CAAC;AACH,CAAC;AAYD;;;;;;GAMG;AACI,KAAK,UAAU,kBAAkB,CACtC,UAAkB,EAClB,IAAyB;IAEzB,MAAM,QAAQ,GAAgD,MAAM,kBAAkB,CAAC,UAAU,CAAC,CAAC;IACnG,IAAI,CAAC,QAAQ,CAAC,EAAE,EAAE,CAAC;QACjB,OAAO,IAAA,eAAG,GAAE,CAAC;IACf,CAAC;IACD,MAAM,EAAE,EAAE,EAAE,GAAG,QAAQ,CAAC,KAAK,CAAC;IAE9B,IAAI,CAAC;QACH,MAAM,MAAM,GAAkB,MAAM,oCAAe,CAAC,UAAU,EAAE,CAAC;QACjE,IAAI,CAAC,MAAM,EAAE,CAAC;YACZ,0BAAU,CAAC,UAAU,CAAC,OAAO,EAAE,wCAAwC,CAAC,CAAC;YACzE,OAAO,IAAA,eAAG,GAAE,CAAC;QACf,CAAC;QACD,MAAM,KAAK,GAAuD,MAAM,MAAM,CAAC,eAAe,CAAC,EAAE,EAAE,IAAI,CAAC,CAAC;QACzG,MAAM,SAAS,GAA2B,IAAA,yBAAY,EAAkB,KAAK,CAAC,CAAC;QAC/E,MAAM,MAAM,GAAoB;YAC9B,EAAE,EAAE,SAAS,EAAE,EAAY;YAC3B,KAAK,EAAE,SAAS,EAAE,KAAe;YACjC,MAAM,EAAE,SAAS,EAAE,MAAgB;YACnC,OAAO,EAAE,SAAS,EAAE,OAAiB;YACrC,MAAM,EAAE,SAAS,EAAE,MAAM;SAC1B,CAAC;QACF,OAAO,IAAA,cAAE,EAAC,MAAM,CAAC,CAAC;IACpB,CAAC;IAAC,OAAO,KAAc,EAAE,CAAC;QACxB,MAAM,YAAY,GAAW,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;QACpF,0BAAU,CAAC,UAAU,CAAC,OAAO,EAAE,gCAAgC,YAAY,EAAE,CAAC,CAAC;QAC/E,OAAO,IAAA,eAAG,GAAE,CAAC;IACf,CAAC;AACH,CAAC;AAcD;;;;;GAKG;AACI,KAAK,UAAU,sBAAsB,CAC1C,OAAe;IAEf,IAAI,CAAC;QACH,MAAM,MAAM,GAAkB,MAAM,oCAAe,CAAC,UAAU,EAAE,CAAC;QACjE,IAAI,CAAC,MAAM,EAAE,CAAC;YACZ,0BAAU,CAAC,UAAU,CAAC,OAAO,EAAE,wCAAwC,CAAC,CAAC;YACzE,OAAO,IAAA,eAAG,GAAE,CAAC;QACf,CAAC;QAED,MAAM,KAAK,GAAoD,MAAM,MAAM,CAAC,YAAY,CAAC,OAAO,CAAC,CAAC;QAClG,IAAI,CAAC,KAAK,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC;YAC1B,0BAAU,CAAC,UAAU,CAAC,OAAO,EAAE,cAAc,OAAO,aAAa,C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1
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+
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@@ -0,0 +1,75 @@
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1
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/**
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2
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* @file DICOM query-payload interpretation helpers.
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3
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*
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4
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* A decoded PACS query result arrives as loosely shaped JSON: studies under
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5
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* one of several container keys, series likewise, and individual tag values
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6
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* either bare or wrapped (`{value: ...}` from CUBE's decoder, `{Value: [...]}`
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7
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* from DICOM-JSON). Four packages grew private copies of this interpretation,
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8
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* each accepting a different subset of the shapes. This module is the one
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9
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* home: every helper accepts the union of the shapes the copies handled.
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*
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11
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* Key components:
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* - tag_extractRaw / tag_extractValue: unwrap one tag value
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13
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* - studies_extractFromDecoded: locate the study array in a decoded payload
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14
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* - series_extractFromStudy: locate the series array in a study object
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15
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* - study_findByUID / series_findByUID: UID lookups over those arrays
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*
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17
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* Dependencies: none — pure functions over unknown-shaped JSON.
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*
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* @module
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*/
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/**
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22
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* Unwraps a potentially wrapped DICOM tag value, preserving its raw type.
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23
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*
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24
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* Accepts CUBE's `{value: ...}` decoder wrapper, the DICOM-JSON
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25
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* `{Value: [...]}` wrapper (first element wins), or a bare value.
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*
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27
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* @param val - Potentially wrapped tag value.
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* @returns The unwrapped value; undefined and null pass through unchanged.
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*/
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30
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+
export declare function tag_extractRaw(val: unknown): unknown;
|
|
31
|
+
/**
|
|
32
|
+
* Extracts a DICOM tag value as a string.
|
|
33
|
+
*
|
|
34
|
+
* @param val - Potentially wrapped tag value.
|
|
35
|
+
* @returns The unwrapped value as a string; empty string for null/undefined.
|
|
36
|
+
*/
|
|
37
|
+
export declare function tag_extractValue(val: unknown): string;
|
|
38
|
+
/**
|
|
39
|
+
* Locates the study array inside a decoded PACS query payload.
|
|
40
|
+
*
|
|
41
|
+
* Probes the container keys the wire has been seen to use (`studies`,
|
|
42
|
+
* `Studies`, `results`), falling back to treating the payload itself as the
|
|
43
|
+
* study collection. A non-array collection is wrapped as a single study.
|
|
44
|
+
*
|
|
45
|
+
* @param decodedJson - The decoded query result payload.
|
|
46
|
+
* @returns The study objects, in payload order. Never null; a payload with
|
|
47
|
+
* no recognizable studies yields a single-element wrap of the payload.
|
|
48
|
+
*/
|
|
49
|
+
export declare function studies_extractFromDecoded(decodedJson: unknown): Record<string, unknown>[];
|
|
50
|
+
/**
|
|
51
|
+
* Locates the series array inside one study object.
|
|
52
|
+
*
|
|
53
|
+
* Probes `series`, `Series`, `results`, and `data`; a study carrying none of
|
|
54
|
+
* them has no series.
|
|
55
|
+
*
|
|
56
|
+
* @param studyObj - One study object from a decoded payload.
|
|
57
|
+
* @returns The series objects, or an empty array.
|
|
58
|
+
*/
|
|
59
|
+
export declare function series_extractFromStudy(studyObj: Record<string, unknown>): Record<string, unknown>[];
|
|
60
|
+
/**
|
|
61
|
+
* Finds a study by its StudyInstanceUID.
|
|
62
|
+
*
|
|
63
|
+
* @param studies - Study objects from studies_extractFromDecoded.
|
|
64
|
+
* @param uid - The StudyInstanceUID to match.
|
|
65
|
+
* @returns The matching study, or undefined.
|
|
66
|
+
*/
|
|
67
|
+
export declare function study_findByUID(studies: Record<string, unknown>[], uid: string): Record<string, unknown> | undefined;
|
|
68
|
+
/**
|
|
69
|
+
* Finds a series by its SeriesInstanceUID.
|
|
70
|
+
*
|
|
71
|
+
* @param seriesArr - Series objects from series_extractFromStudy.
|
|
72
|
+
* @param uid - The SeriesInstanceUID to match.
|
|
73
|
+
* @returns The matching series, or undefined.
|
|
74
|
+
*/
|
|
75
|
+
export declare function series_findByUID(seriesArr: Record<string, unknown>[], uid: string): Record<string, unknown> | undefined;
|
|
@@ -0,0 +1,130 @@
|
|
|
1
|
+
"use strict";
|
|
2
|
+
/**
|
|
3
|
+
* @file DICOM query-payload interpretation helpers.
|
|
4
|
+
*
|
|
5
|
+
* A decoded PACS query result arrives as loosely shaped JSON: studies under
|
|
6
|
+
* one of several container keys, series likewise, and individual tag values
|
|
7
|
+
* either bare or wrapped (`{value: ...}` from CUBE's decoder, `{Value: [...]}`
|
|
8
|
+
* from DICOM-JSON). Four packages grew private copies of this interpretation,
|
|
9
|
+
* each accepting a different subset of the shapes. This module is the one
|
|
10
|
+
* home: every helper accepts the union of the shapes the copies handled.
|
|
11
|
+
*
|
|
12
|
+
* Key components:
|
|
13
|
+
* - tag_extractRaw / tag_extractValue: unwrap one tag value
|
|
14
|
+
* - studies_extractFromDecoded: locate the study array in a decoded payload
|
|
15
|
+
* - series_extractFromStudy: locate the series array in a study object
|
|
16
|
+
* - study_findByUID / series_findByUID: UID lookups over those arrays
|
|
17
|
+
*
|
|
18
|
+
* Dependencies: none — pure functions over unknown-shaped JSON.
|
|
19
|
+
*
|
|
20
|
+
* @module
|
|
21
|
+
*/
|
|
22
|
+
Object.defineProperty(exports, "__esModule", { value: true });
|
|
23
|
+
exports.tag_extractRaw = tag_extractRaw;
|
|
24
|
+
exports.tag_extractValue = tag_extractValue;
|
|
25
|
+
exports.studies_extractFromDecoded = studies_extractFromDecoded;
|
|
26
|
+
exports.series_extractFromStudy = series_extractFromStudy;
|
|
27
|
+
exports.study_findByUID = study_findByUID;
|
|
28
|
+
exports.series_findByUID = series_findByUID;
|
|
29
|
+
/**
|
|
30
|
+
* Unwraps a potentially wrapped DICOM tag value, preserving its raw type.
|
|
31
|
+
*
|
|
32
|
+
* Accepts CUBE's `{value: ...}` decoder wrapper, the DICOM-JSON
|
|
33
|
+
* `{Value: [...]}` wrapper (first element wins), or a bare value.
|
|
34
|
+
*
|
|
35
|
+
* @param val - Potentially wrapped tag value.
|
|
36
|
+
* @returns The unwrapped value; undefined and null pass through unchanged.
|
|
37
|
+
*/
|
|
38
|
+
function tag_extractRaw(val) {
|
|
39
|
+
if (val && typeof val === "object") {
|
|
40
|
+
const record = val;
|
|
41
|
+
if ("value" in record)
|
|
42
|
+
return record.value;
|
|
43
|
+
if (Array.isArray(record.Value) && record.Value.length > 0)
|
|
44
|
+
return record.Value[0];
|
|
45
|
+
}
|
|
46
|
+
return val;
|
|
47
|
+
}
|
|
48
|
+
/**
|
|
49
|
+
* Extracts a DICOM tag value as a string.
|
|
50
|
+
*
|
|
51
|
+
* @param val - Potentially wrapped tag value.
|
|
52
|
+
* @returns The unwrapped value as a string; empty string for null/undefined.
|
|
53
|
+
*/
|
|
54
|
+
function tag_extractValue(val) {
|
|
55
|
+
return String(tag_extractRaw(val) ?? "");
|
|
56
|
+
}
|
|
57
|
+
/**
|
|
58
|
+
* Locates the study array inside a decoded PACS query payload.
|
|
59
|
+
*
|
|
60
|
+
* Probes the container keys the wire has been seen to use (`studies`,
|
|
61
|
+
* `Studies`, `results`), falling back to treating the payload itself as the
|
|
62
|
+
* study collection. A non-array collection is wrapped as a single study.
|
|
63
|
+
*
|
|
64
|
+
* @param decodedJson - The decoded query result payload.
|
|
65
|
+
* @returns The study objects, in payload order. Never null; a payload with
|
|
66
|
+
* no recognizable studies yields a single-element wrap of the payload.
|
|
67
|
+
*/
|
|
68
|
+
function studies_extractFromDecoded(decodedJson) {
|
|
69
|
+
let studiesObj;
|
|
70
|
+
if (decodedJson && typeof decodedJson === "object" && !Array.isArray(decodedJson)) {
|
|
71
|
+
const record = decodedJson;
|
|
72
|
+
if ("studies" in record)
|
|
73
|
+
studiesObj = record.studies;
|
|
74
|
+
else if ("Studies" in record)
|
|
75
|
+
studiesObj = record.Studies;
|
|
76
|
+
else if ("results" in record)
|
|
77
|
+
studiesObj = record.results;
|
|
78
|
+
else
|
|
79
|
+
studiesObj = decodedJson;
|
|
80
|
+
}
|
|
81
|
+
else {
|
|
82
|
+
studiesObj = decodedJson;
|
|
83
|
+
}
|
|
84
|
+
const arr = Array.isArray(studiesObj) ? studiesObj : [studiesObj];
|
|
85
|
+
return arr;
|
|
86
|
+
}
|
|
87
|
+
/**
|
|
88
|
+
* Locates the series array inside one study object.
|
|
89
|
+
*
|
|
90
|
+
* Probes `series`, `Series`, `results`, and `data`; a study carrying none of
|
|
91
|
+
* them has no series.
|
|
92
|
+
*
|
|
93
|
+
* @param studyObj - One study object from a decoded payload.
|
|
94
|
+
* @returns The series objects, or an empty array.
|
|
95
|
+
*/
|
|
96
|
+
function series_extractFromStudy(studyObj) {
|
|
97
|
+
const arr = Array.isArray(studyObj.series) ? studyObj.series :
|
|
98
|
+
Array.isArray(studyObj.Series) ? studyObj.Series :
|
|
99
|
+
Array.isArray(studyObj.results) ? studyObj.results :
|
|
100
|
+
Array.isArray(studyObj.data) ? studyObj.data :
|
|
101
|
+
[];
|
|
102
|
+
return arr;
|
|
103
|
+
}
|
|
104
|
+
/**
|
|
105
|
+
* Finds a study by its StudyInstanceUID.
|
|
106
|
+
*
|
|
107
|
+
* @param studies - Study objects from studies_extractFromDecoded.
|
|
108
|
+
* @param uid - The StudyInstanceUID to match.
|
|
109
|
+
* @returns The matching study, or undefined.
|
|
110
|
+
*/
|
|
111
|
+
function study_findByUID(studies, uid) {
|
|
112
|
+
return studies.find((s) => {
|
|
113
|
+
const sUID = tag_extractValue(s.StudyInstanceUID || s.uid);
|
|
114
|
+
return sUID === uid;
|
|
115
|
+
});
|
|
116
|
+
}
|
|
117
|
+
/**
|
|
118
|
+
* Finds a series by its SeriesInstanceUID.
|
|
119
|
+
*
|
|
120
|
+
* @param seriesArr - Series objects from series_extractFromStudy.
|
|
121
|
+
* @param uid - The SeriesInstanceUID to match.
|
|
122
|
+
* @returns The matching series, or undefined.
|
|
123
|
+
*/
|
|
124
|
+
function series_findByUID(seriesArr, uid) {
|
|
125
|
+
return seriesArr.find((s) => {
|
|
126
|
+
const sUID = tag_extractValue(s.SeriesInstanceUID || s.uid);
|
|
127
|
+
return sUID === uid;
|
|
128
|
+
});
|
|
129
|
+
}
|
|
130
|
+
//# sourceMappingURL=dicomPayload.js.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"dicomPayload.js","sourceRoot":"","sources":["../../src/pacs/dicomPayload.ts"],"names":[],"mappings":";AAAA;;;;;;;;;;;;;;;;;;;GAmBG;;AAWH,wCAOC;AAQD,4CAEC;AAaD,gEAaC;AAWD,0DAQC;AASD,0CAKC;AASD,4CAKC;AAnGD;;;;;;;;GAQG;AACH,SAAgB,cAAc,CAAC,GAAY;IACzC,IAAI,GAAG,IAAI,OAAO,GAAG,KAAK,QAAQ,EAAE,CAAC;QACnC,MAAM,MAAM,GAA4B,GAA8B,CAAC;QACvE,IAAI,OAAO,IAAI,MAAM;YAAE,OAAO,MAAM,CAAC,KAAK,CAAC;QAC3C,IAAI,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,IAAI,MAAM,CAAC,KAAK,CAAC,MAAM,GAAG,CAAC;YAAE,OAAO,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;IACrF,CAAC;IACD,OAAO,GAAG,CAAC;AACb,CAAC;AAED;;;;;GAKG;AACH,SAAgB,gBAAgB,CAAC,GAAY;IAC3C,OAAO,MAAM,CAAC,cAAc,CAAC,GAAG,CAAC,IAAI,EAAE,CAAC,CAAC;AAC3C,CAAC;AAED;;;;;;;;;;GAUG;AACH,SAAgB,0BAA0B,CAAC,WAAoB;IAC7D,IAAI,UAAmB,CAAC;IACxB,IAAI,WAAW,IAAI,OAAO,WAAW,KAAK,QAAQ,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,WAAW,CAAC,EAAE,CAAC;QAClF,MAAM,MAAM,GAA4B,WAAsC,CAAC;QAC/E,IAAI,SAAS,IAAI,MAAM;YAAE,UAAU,GAAG,MAAM,CAAC,OAAO,CAAC;aAChD,IAAI,SAAS,IAAI,MAAM;YAAE,UAAU,GAAG,MAAM,CAAC,OAAO,CAAC;aACrD,IAAI,SAAS,IAAI,MAAM;YAAE,UAAU,GAAG,MAAM,CAAC,OAAO,CAAC;;YACrD,UAAU,GAAG,WAAW,CAAC;IAChC,CAAC;SAAM,CAAC;QACN,UAAU,GAAG,WAAW,CAAC;IAC3B,CAAC;IACD,MAAM,GAAG,GAAc,KAAK,CAAC,OAAO,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC,UAAU,CAAC,CAAC;IAC7E,OAAO,GAAgC,CAAC;AAC1C,CAAC;AAED;;;;;;;;GAQG;AACH,SAAgB,uBAAuB,CAAC,QAAiC;IACvE,MAAM,GAAG,GACP,KAAK,CAAC,OAAO,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC;QAClD,KAAK,CAAC,OAAO,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC;YAClD,KAAK,CAAC,OAAO,CAAC,QAAQ,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,OAAO,CAAC,CAAC;gBACpD,KAAK,CAAC,OAAO,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC;oBAC9C,EAAE,CAAC;IACL,OAAO,GAAgC,CAAC;AAC1C,CAAC;AAED;;;;;;GAMG;AACH,SAAgB,eAAe,CAAC,OAAkC,EAAE,GAAW;IAC7E,OAAO,OAAO,CAAC,IAAI,CAAC,CAAC,CAA0B,EAAE,EAAE;QACjD,MAAM,IAAI,GAAW,gBAAgB,CAAC,CAAC,CAAC,gBAAgB,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC;QACnE,OAAO,IAAI,KAAK,GAAG,CAAC;IACtB,CAAC,CAAC,CAAC;AACL,CAAC;AAED;;;;;;GAMG;AACH,SAAgB,gBAAgB,CAAC,SAAoC,EAAE,GAAW;IAChF,OAAO,SAAS,CAAC,IAAI,CAAC,CAAC,CAA0B,EAAE,EAAE;QACnD,MAAM,IAAI,GAAW,gBAAgB,CAAC,CAAC,CAAC,iBAAiB,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC;QACpE,OAAO,IAAI,KAAK,GAAG,CAAC;IACtB,CAAC,CAAC,CAAC;AACL,CAAC"}
|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@fnndsc/cumin",
|
|
3
|
-
"version": "3.
|
|
3
|
+
"version": "3.12.0",
|
|
4
4
|
"description": "Utility library for ChILI and other ChRIS-related JavaScript applications",
|
|
5
5
|
"repository": {
|
|
6
6
|
"type": "git",
|
|
@@ -23,6 +23,11 @@
|
|
|
23
23
|
"types": "./dist/index.d.ts",
|
|
24
24
|
"require": "./dist/index.js"
|
|
25
25
|
},
|
|
26
|
+
"./dicom-payload": {
|
|
27
|
+
"import": "./dist/pacs/dicomPayload.js",
|
|
28
|
+
"types": "./dist/pacs/dicomPayload.d.ts",
|
|
29
|
+
"require": "./dist/pacs/dicomPayload.js"
|
|
30
|
+
},
|
|
26
31
|
"./proc-prompt": {
|
|
27
32
|
"import": "./dist/cache/procPrompt.js",
|
|
28
33
|
"types": "./dist/cache/procPrompt.d.ts",
|