@fnndsc/brasa 0.1.0

package/dist/builtins/sys/physicalmode.js

@@ -0,0 +1,34 @@
+/**
+ * @file Builtin physicalmode command.
+ * Toggles physical filesystem mode, reported as a command envelope.
+ */
+import chalk from 'chalk';
+import { envelope_ok, envelope_error } from '@fnndsc/cumin';
+import { session } from '../../session/index.js';
+/**
+ * Toggles or displays physical filesystem mode.
+ *
+ * @param args - Command line arguments: 'on', 'off', or empty to display status.
+ * @returns An envelope describing the (possibly updated) physical mode state.
+ */
+export async function builtin_physicalmode(args) {
+    const subcommand = args[0];
+    if (!subcommand) {
+        const enabled = session.physicalMode_get();
+        const status = enabled ? 'enabled' : 'disabled';
+        const detail = enabled
+            ? chalk.gray('  Paths are used directly without logical-to-physical mapping.')
+            : chalk.gray('  Paths are resolved through logical-to-physical mapping.');
+        return envelope_ok(`Physical filesystem mode: ${chalk.yellow(status)}\n${detail}\n${chalk.gray('\nUsage: physicalmode [on|off]')}\n`, { kind: 'sys.physicalMode', data: { enabled } });
+    }
+    if (subcommand === 'on') {
+        session.physicalMode_set(true);
+        return envelope_ok(`${chalk.yellow('[!] Physical filesystem mode enabled')}\n${chalk.gray('    Paths will be used directly without logical-to-physical mapping.')}\n`, { kind: 'sys.physicalMode', data: { enabled: true } });
+    }
+    if (subcommand === 'off') {
+        session.physicalMode_set(false);
+        return envelope_ok(`${chalk.green('[+] Physical filesystem mode disabled')}\n${chalk.gray('    Paths will be resolved through logical-to-physical mapping.')}\n`, { kind: 'sys.physicalMode', data: { enabled: false } });
+    }
+    return envelope_error(`${chalk.red(`Unknown argument: ${subcommand}`)}\n${chalk.gray('Usage: physicalmode [on|off]')}\n`);
+}
+//# sourceMappingURL=physicalmode.js.map

package/dist/builtins/sys/physicalmode.js.map

@@ -0,0 +1 @@
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package/dist/builtins/sys/timing.d.ts

@@ -0,0 +1,8 @@
+import { CommandEnvelope } from '@fnndsc/cumin';
+/**
+ * Toggles or displays command timing mode.
+ *
+ * @param args - Command line arguments: 'on', 'off', or empty to display status.
+ * @returns An envelope describing the (possibly updated) timing state.
+ */
+export declare function builtin_timing(args: string[]): Promise<CommandEnvelope>;

package/dist/builtins/sys/timing.js

@@ -0,0 +1,34 @@
+/**
+ * @file Builtin timing command.
+ * Toggles execution timing, reported as a command envelope.
+ */
+import chalk from 'chalk';
+import { envelope_ok, envelope_error } from '@fnndsc/cumin';
+import { session } from '../../session/index.js';
+/**
+ * Toggles or displays command timing mode.
+ *
+ * @param args - Command line arguments: 'on', 'off', or empty to display status.
+ * @returns An envelope describing the (possibly updated) timing state.
+ */
+export async function builtin_timing(args) {
+    const subcommand = args[0];
+    if (!subcommand) {
+        const enabled = session.timingEnabled_get();
+        const status = enabled ? 'enabled' : 'disabled';
+        const detail = enabled
+            ? chalk.gray('  Execution times will be displayed after each command.')
+            : chalk.gray('  Execution times are hidden.');
+        return envelope_ok(`Command timing: ${chalk.yellow(status)}\n${detail}\n${chalk.gray('\nUsage: timing [on|off]')}\n`, { kind: 'sys.timing', data: { enabled } });
+    }
+    if (subcommand === 'on') {
+        session.timingEnabled_set(true);
+        return envelope_ok(`${chalk.green('[+] Command timing enabled')}\n${chalk.gray('    Execution times will be displayed after each command.')}\n`, { kind: 'sys.timing', data: { enabled: true } });
+    }
+    if (subcommand === 'off') {
+        session.timingEnabled_set(false);
+        return envelope_ok(`${chalk.gray('[-] Command timing disabled')}\n${chalk.gray('    Execution times will no longer be displayed.')}\n`, { kind: 'sys.timing', data: { enabled: false } });
+    }
+    return envelope_error(`${chalk.red(`Unknown argument: ${subcommand}`)}\n${chalk.gray('Usage: timing [on|off]')}\n`);
+}
+//# sourceMappingURL=timing.js.map

package/dist/builtins/sys/timing.js.map

@@ -0,0 +1 @@
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package/dist/builtins/sys/version.d.ts

@@ -0,0 +1,15 @@
+/**
+ * @file Builtin version.
+ * Reports the chell stack versions (chell plus the chili/salsa/cumin layers) as
+ * a command envelope — the in-shell counterpart of `chell --version`.
+ */
+import { CommandEnvelope } from '@fnndsc/cumin';
+/**
+ * Reports the version of chell and the sandwich layers it runs with — the same
+ * report as `chell --version`, available from inside the shell.
+ *
+ * @param _args - Unused.
+ * @returns An envelope carrying the multi-line version report and a typed model
+ *   of each layer's version.
+ */
+export declare function builtin_version(_args: string[]): Promise<CommandEnvelope>;

package/dist/builtins/sys/version.js

@@ -0,0 +1,23 @@
+/**
+ * @file Builtin version.
+ * Reports the chell stack versions (chell plus the chili/salsa/cumin layers) as
+ * a command envelope — the in-shell counterpart of `chell --version`.
+ */
+import { envelope_ok } from '@fnndsc/cumin';
+import { versionReport_build, versions_get } from '../../core/version.js';
+/**
+ * Reports the version of chell and the sandwich layers it runs with — the same
+ * report as `chell --version`, available from inside the shell.
+ *
+ * @param _args - Unused.
+ * @returns An envelope carrying the multi-line version report and a typed model
+ *   of each layer's version.
+ */
+export async function builtin_version(_args) {
+    const versions = versions_get();
+    return envelope_ok(`${versionReport_build()}\n`, {
+        kind: 'sys.version',
+        data: versions,
+    });
+}
+//# sourceMappingURL=version.js.map

package/dist/builtins/sys/version.js.map

@@ -0,0 +1 @@
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package/dist/builtins/sys/whoami.d.ts

@@ -0,0 +1,17 @@
+import { CommandEnvelope } from '@fnndsc/cumin';
+/**
+ * Reports the current authenticated ChRIS username.
+ *
+ * @param _args - Unused.
+ * @returns An envelope carrying the username, or an error envelope with a
+ *   not-connected notice when no user is authenticated.
+ */
+export declare function builtin_whoami(_args: string[]): Promise<CommandEnvelope>;
+/**
+ * Reports the current CUBE URI.
+ *
+ * @param _args - Unused.
+ * @returns An envelope carrying the CUBE URL, or an error envelope with a
+ *   not-connected notice when no connection exists.
+ */
+export declare function builtin_whereami(_args: string[]): Promise<CommandEnvelope>;

package/dist/builtins/sys/whoami.js

@@ -0,0 +1,44 @@
+/**
+ * @file Builtins whoami and whereami.
+ * Quick single-line identity queries, reported as command envelopes.
+ */
+import chalk from 'chalk';
+import { context_getSingle } from '@fnndsc/salsa';
+import { envelope_ok, envelope_error } from '@fnndsc/cumin';
+/**
+ * Reports the current authenticated ChRIS username.
+ *
+ * @param _args - Unused.
+ * @returns An envelope carrying the username, or an error envelope with a
+ *   not-connected notice when no user is authenticated.
+ */
+export async function builtin_whoami(_args) {
+    const context = await context_getSingle();
+    if (context.user) {
+        return envelope_ok(`${chalk.cyan(context.user)}\n`, {
+            kind: 'session.identity',
+            data: { user: context.user },
+        });
+    }
+    process.exitCode = 1;
+    return envelope_error(`${chalk.gray('(not connected)')}\n`);
+}
+/**
+ * Reports the current CUBE URI.
+ *
+ * @param _args - Unused.
+ * @returns An envelope carrying the CUBE URL, or an error envelope with a
+ *   not-connected notice when no connection exists.
+ */
+export async function builtin_whereami(_args) {
+    const context = await context_getSingle();
+    if (context.URL) {
+        return envelope_ok(`${chalk.blue(context.URL)}\n`, {
+            kind: 'session.cube',
+            data: { url: context.URL },
+        });
+    }
+    process.exitCode = 1;
+    return envelope_error(`${chalk.gray('(not connected)')}\n`);
+}
+//# sourceMappingURL=whoami.js.map

package/dist/builtins/sys/whoami.js.map

@@ -0,0 +1 @@
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package/dist/builtins/utils.d.ts

@@ -0,0 +1,55 @@
+/**
+ * Structure for parsed command line arguments.
+ */
+export interface ParsedArgs {
+    _: string[];
+    [key: string]: string | boolean | string[];
+}
+/**
+ * Parses raw argument strings into a structured object.
+ * Supports `--` as an end-of-options marker (everything after is treated as positional args).
+ */
+export declare function commandArgs_process(args: string[]): ParsedArgs;
+/**
+ * Context required for path resolution.
+ */
+export interface PathContext {
+    user: string | null;
+    cwd: string;
+}
+/**
+ * Resolves a path argument, handling `~` expansion and relative paths.
+ * Pure function version that takes context as argument.
+ *
+ * @param inputPath - The path to resolve.
+ * @param context - User and CWD context.
+ * @returns The absolute path.
+ */
+export declare function path_resolvePure(inputPath: string, context: PathContext): string;
+/**
+ * Resolves a path argument, handling `~` expansion and relative paths.
+ * @param inputPath - The path to resolve.
+ * @returns The absolute path.
+ */
+export declare function path_resolve(inputPath: string): Promise<string>;
+/**
+ * Resolves links in a path without using PathMapper (for physical mode).
+ * Checks each component to see if it's a link and follows it.
+ *
+ * @param targetPath - The path to resolve.
+ * @returns The resolved path with links followed.
+ */
+export declare function path_resolveLinks(targetPath: string): Promise<string>;
+/**
+ * Strips the function name padding prefix from an error message if debug mode is disabled.
+ *
+ * @param message - The raw/enhanced error message from the ErrorStack.
+ * @returns The cleaned or original error message based on the debug configuration.
+ *
+ * @example
+ * ```
+ * const cleaned = error_stripDebugPrefix("[PacsVfsProvider.list                    ] | ls: error");
+ * // cleaned will be "ls: error" if debug mode is disabled
+ * ```
+ */
+export declare function error_stripDebugPrefix(message: string): string;

package/dist/builtins/utils.js

@@ -0,0 +1,145 @@
+/**
+ * @file Builtin Utilities
+ * Pure functions for argument parsing and path resolution logic.
+ */
+import * as path from 'path';
+import { context_getSingle } from '@fnndsc/salsa';
+import { session } from '../session/index.js';
+/**
+ * Parses raw argument strings into a structured object.
+ * Supports `--` as an end-of-options marker (everything after is treated as positional args).
+ */
+export function commandArgs_process(args) {
+    const result = { _: [] };
+    let endOfOptions = false;
+    for (let i = 0; i < args.length; i++) {
+        const arg = args[i];
+        // Check for -- (end of options marker)
+        if (arg === '--') {
+            endOfOptions = true;
+            continue; // Skip the -- itself
+        }
+        // After --, everything is a positional argument
+        if (endOfOptions) {
+            result._.push(arg);
+            continue;
+        }
+        if (arg.startsWith('--')) {
+            const key = arg.substring(2);
+            if (args[i + 1] && !args[i + 1].startsWith('-')) {
+                result[key] = args[i + 1];
+                i++;
+            }
+            else {
+                result[key] = true;
+            }
+        }
+        else if (arg.startsWith('-') && arg.length > 1) {
+            const flags = arg.substring(1).split('');
+            flags.forEach(flag => result[flag] = true);
+        }
+        else {
+            result._.push(arg);
+        }
+    }
+    return result;
+}
+/**
+ * Resolves a path argument, handling `~` expansion and relative paths.
+ * Pure function version that takes context as argument.
+ *
+ * @param inputPath - The path to resolve.
+ * @param context - User and CWD context.
+ * @returns The absolute path.
+ */
+export function path_resolvePure(inputPath, context) {
+    let resolved = inputPath;
+    const { user, cwd } = context;
+    if (inputPath.startsWith('~')) {
+        const home = user ? `/home/${user}` : '/';
+        if (inputPath === '~' || inputPath === '~/') {
+            resolved = home;
+        }
+        else if (inputPath.startsWith('~/')) {
+            resolved = path.posix.join(home, inputPath.substring(2));
+        }
+    }
+    if (!resolved.startsWith('/')) {
+        resolved = path.posix.resolve(cwd, resolved);
+    }
+    // Normalize
+    if (resolved.length > 1 && resolved.endsWith('/')) {
+        resolved = resolved.slice(0, -1);
+    }
+    return resolved;
+}
+/**
+ * Resolves a path argument, handling `~` expansion and relative paths.
+ * @param inputPath - The path to resolve.
+ * @returns The absolute path.
+ */
+export async function path_resolve(inputPath) {
+    const context = await context_getSingle();
+    const user = context.user;
+    const cwd = await session.getCWD();
+    return path_resolvePure(inputPath, { user, cwd });
+}
+/**
+ * Resolves links in a path without using PathMapper (for physical mode).
+ * Checks each component to see if it's a link and follows it.
+ *
+ * @param targetPath - The path to resolve.
+ * @returns The resolved path with links followed.
+ */
+export async function path_resolveLinks(targetPath) {
+    // We need to dynamically import files_list to avoid circular dependency
+    // because builtins/fs/ls.ts imports path_resolve from here
+    const { files_list } = await import('@fnndsc/chili/commands/fs/ls.js');
+    const components = targetPath.split('/').filter(c => c);
+    let currentPath = '';
+    for (const component of components) {
+        const parentPath = currentPath || '/';
+        currentPath = `${currentPath}/${component}`;
+        try {
+            // List parent directory to check if component is a link
+            const items = await files_list({ path: parentPath }, parentPath);
+            // Find the component in the listing
+            const item = items.find((i) => i.name === component);
+            if (item && item.type === 'link' && item.target) {
+                // Component is a link - resolve it
+                if (item.target.startsWith('/')) {
+                    // Absolute link target
+                    currentPath = item.target;
+                }
+                else {
+                    // Relative link target
+                    currentPath = `${parentPath}/${item.target}`.replace('//', '/');
+                }
+            }
+        }
+        catch (_error) {
+            // If we can't list the directory, continue with the current path
+            continue;
+        }
+    }
+    return currentPath || '/';
+}
+/**
+ * Strips the function name padding prefix from an error message if debug mode is disabled.
+ *
+ * @param message - The raw/enhanced error message from the ErrorStack.
+ * @returns The cleaned or original error message based on the debug configuration.
+ *
+ * @example
+ * ```
+ * const cleaned = error_stripDebugPrefix("[PacsVfsProvider.list                    ] | ls: error");
+ * // cleaned will be "ls: error" if debug mode is disabled
+ * ```
+ */
+export function error_stripDebugPrefix(message) {
+    if (session.connection?.config?.debug) {
+        return message;
+    }
+    return message.replace(/^\[[^\]]+\]\s*\|\s*/, '');
+}
+//# sourceMappingURL=utils.js.map

package/dist/builtins/utils.js.map

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package/dist/builtins/wildcard.d.ts

@@ -0,0 +1,26 @@
+import { Result } from '@fnndsc/cumin';
+/**
+ * Checks if a string contains wildcard characters.
+ *
+ * @param arg - The argument to check.
+ * @returns True if the argument contains wildcards.
+ */
+export declare function string_checkHasWildcard(arg: string): boolean;
+/**
+ * Expands a wildcard pattern against the current directory.
+ *
+ * @param pattern - The glob pattern (e.g., "*.ts", "test*.json").
+ * @returns A Promise resolving to Result<string[]>.
+ *          Ok([]) = no matches (not an error).
+ *          Err(...) = couldn't expand (API failure, permission denied, etc.).
+ */
+export declare function wildcard_expand(pattern: string): Promise<Result<string[]>>;
+/**
+ * Expands all wildcards in an argument list.
+ *
+ * @param args - The argument list potentially containing wildcards.
+ * @returns A Promise resolving to Result<string[]>.
+ *          On error expanding any pattern, returns the error.
+ *          Empty matches return the original pattern.
+ */
+export declare function wildcards_expandAll(args: string[]): Promise<Result<string[]>>;

package/dist/builtins/wildcard.js

@@ -0,0 +1,120 @@
+/**
+ * @file Wildcard expansion for shell commands.
+ *
+ * Provides glob pattern matching against the ChRIS filesystem.
+ *
+ * @module
+ */
+import { minimatch } from 'minimatch';
+import { session } from '../session/index.js';
+import { vfsDispatcher } from '@fnndsc/salsa';
+import { listCache_get, Ok, Err, errorStack } from '@fnndsc/cumin';
+/**
+ * Checks if a string contains wildcard characters.
+ *
+ * @param arg - The argument to check.
+ * @returns True if the argument contains wildcards.
+ */
+export function string_checkHasWildcard(arg) {
+    return /[*?[\]]/.test(arg);
+}
+/**
+ * Expands a wildcard pattern against the current directory.
+ *
+ * @param pattern - The glob pattern (e.g., "*.ts", "test*.json").
+ * @returns A Promise resolving to Result<string[]>.
+ *          Ok([]) = no matches (not an error).
+ *          Err(...) = couldn't expand (API failure, permission denied, etc.).
+ */
+export async function wildcard_expand(pattern) {
+    // If no wildcard, return as-is
+    if (!string_checkHasWildcard(pattern)) {
+        return Ok([pattern]);
+    }
+    try {
+        // Get current directory
+        const cwd = await session.getCWD();
+        // Handle patterns with directory components (e.g., "data/*.txt")
+        let searchDir = cwd;
+        let matchPattern = pattern;
+        // Check if pattern has directory separator
+        if (pattern.includes('/')) {
+            const parts = pattern.split('/');
+            const lastPart = parts.pop() || '*';
+            const dirPart = parts.join('/');
+            // Resolve directory part (could be relative)
+            if (dirPart.startsWith('/')) {
+                searchDir = dirPart;
+            }
+            else if (dirPart === '.') {
+                searchDir = cwd;
+            }
+            else {
+                // Relative path - append to cwd
+                searchDir = `${cwd}/${dirPart}`.replace(/\/+/g, '/');
+            }
+            matchPattern = lastPart;
+        }
+        // List files in the directory (check cache first)
+        let items = [];
+        const listCache = listCache_get();
+        const cached = listCache.cache_get(searchDir);
+        if (cached) {
+            items = cached.data;
+        }
+        else {
+            const vfsResult = await vfsDispatcher.list(searchDir);
+            if (vfsResult.ok) {
+                items = vfsResult.value;
+                listCache.cache_set(searchDir, items);
+            }
+            else {
+                return Err();
+            }
+        }
+        // Filter items by pattern
+        const matches = items
+            .filter((item) => minimatch(item.name, matchPattern))
+            .map((item) => {
+            // Return full path if we searched a different directory
+            if (searchDir !== cwd) {
+                return `${searchDir}/${item.name}`.replace(/\/+/g, '/');
+            }
+            return item.name;
+        });
+        // Ok([]) for no matches (not an error)
+        return Ok(matches);
+    }
+    catch (error) {
+        const errorMsg = error instanceof Error ? error.message : String(error);
+        errorStack.stack_push("error", `Failed to expand wildcard '${pattern}': ${errorMsg}`);
+        return Err();
+    }
+}
+/**
+ * Expands all wildcards in an argument list.
+ *
+ * @param args - The argument list potentially containing wildcards.
+ * @returns A Promise resolving to Result<string[]>.
+ *          On error expanding any pattern, returns the error.
+ *          Empty matches return the original pattern.
+ */
+export async function wildcards_expandAll(args) {
+    const expanded = [];
+    for (const arg of args) {
+        const result = await wildcard_expand(arg);
+        if (!result.ok) {
+            // Propagate error up
+            return result;
+        }
+        // If no matches, use original pattern (let command handle "not found")
+        if (result.value.length === 0) {
+            expanded.push(arg);
+        }
+        else {
+            expanded.push(...result.value);
+        }
+    }
+    return Ok(expanded);
+}
+//# sourceMappingURL=wildcard.js.map

package/dist/builtins/wildcard.js.map

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package/dist/command-keys.d.ts

@@ -0,0 +1,8 @@
+/**
+ * @file Canonical list of all registered command keys in COMMAND_HANDLERS.
+ *
+ * Kept separate from chell.ts so tests can verify wiring without importing
+ * the full application entry point and all its transitive dependencies.
+ * Must stay in sync with COMMAND_HANDLERS in chell.ts.
+ */
+export declare const COMMAND_HANDLERS_KEYS: string[];

package/dist/command-keys.js

@@ -0,0 +1,32 @@
+/**
+ * @file Canonical list of all registered command keys in COMMAND_HANDLERS.
+ *
+ * Kept separate from chell.ts so tests can verify wiring without importing
+ * the full application entry point and all its transitive dependencies.
+ * Must stay in sync with COMMAND_HANDLERS in chell.ts.
+ */
+export const COMMAND_HANDLERS_KEYS = [
+    // filesystem
+    'cd', 'pwd', 'ls', 'cat', 'cp', 'mv', 'rm', 'touch', 'mkdir', 'tree', 'du',
+    'upload', 'download', 'pull',
+    // net
+    'connect', 'logout', 'pacs', 'query', 'cubepath',
+    // sys
+    'context', 'physicalmode', 'prompt', 'timing', 'whoami', 'whereami', 'debug', 'help', 'proc',
+    // resources — canonical + aliases
+    'plugin', 'plugins',
+    'feed', 'feeds',
+    'pipeline', 'pipelines',
+    'compute', 'computes',
+    'files', 'links', 'dirs',
+    'store',
+    'tag', 'tags',
+    'group', 'groups',
+    'pluginmeta', 'pluginmetas', 'meta', 'metas',
+    'plugininstance', 'plugininstances', 'instance', 'instances', 'job', 'jobs',
+    'workflow', 'workflows',
+    'parametersofplugin',
+    // pacs delegation
+    'pacsservers', 'pacsqueries', 'pacsretrieve',
+];
+//# sourceMappingURL=command-keys.js.map

package/dist/command-keys.js.map

@@ -0,0 +1 @@
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