@flumens/models 0.6.0 → 0.7.0

package/dist/Indicia/Sample.js

@@ -1,687 +1 @@
-'use strict';
-
-Object.defineProperty(exports, '__esModule', { value: true });
-
-var tslib = require('tslib');
-var mobx = require('mobx');
-var axios = require('axios');
-var lodash = require('lodash');
-var utils = require('@flumens/utils');
-var Model = require('../Model.js');
-var Media = require('./Media.js');
-var Occurrence = require('./Occurrence.js');
-var helpers = require('./helpers.js');
-
-function _interopDefaultLegacy (e) { return e && typeof e === 'object' && 'default' in e ? e : { 'default': e }; }
-
-var axios__default = /*#__PURE__*/_interopDefaultLegacy(axios);
-
-function setNewRemoteID(model, responseData) {
-    var _a, _b, _c, _d;
-    if (!(responseData === null || responseData === void 0 ? void 0 : responseData.values)) {
-        if (((_a = process === null || process === void 0 ? void 0 : process.env) === null || _a === void 0 ? void 0 : _a.NODE_ENV) === 'test')
-            return;
-        console.warn("Model didn't receive an id from the server");
-        return;
-    }
-    // eslint-disable-next-line no-param-reassign
-    model.id = responseData.values.id;
-    // do that for all submodels
-    if (model.samples && responseData.samples) {
-        (_b = model.samples) === null || _b === void 0 ? void 0 : _b.forEach(function (subModel, index) {
-            return setNewRemoteID(subModel, responseData.samples[index]);
-        });
-    }
-    if (model.occurrences && responseData.occurrences) {
-        (_c = model.occurrences) === null || _c === void 0 ? void 0 : _c.forEach(function (subModel, index) {
-            return setNewRemoteID(subModel, responseData.occurrences[index]);
-        });
-    }
-    if (model.media && responseData.media) {
-        (_d = model.media) === null || _d === void 0 ? void 0 : _d.forEach(function (subModel, index) {
-            return setNewRemoteID(subModel, responseData.media[index]);
-        });
-    }
-}
-var getMediaFormData = function (model) { return tslib.__awaiter(void 0, void 0, void 0, function () {
-    var formDataArgs, getFormData, formData, formData, formData;
-    return tslib.__generator(this, function (_a) {
-        switch (_a.label) {
-            case 0:
-                formDataArgs = [];
-                if (!model.media) return [3 /*break*/, 2];
-                getFormData = function (m) { return tslib.__awaiter(void 0, void 0, void 0, function () {
-                    var formData;
-                    return tslib.__generator(this, function (_a) {
-                        switch (_a.label) {
-                            case 0: return [4 /*yield*/, m.getFormData()];
-                            case 1:
-                                formData = _a.sent();
-                                return [2 /*return*/, [m, formData]];
-                        }
-                    });
-                }); };
-                return [4 /*yield*/, Promise.all(model.media.map(getFormData))];
-            case 1:
-                formData = _a.sent();
-                formDataArgs.push.apply(formDataArgs, formData);
-                _a.label = 2;
-            case 2:
-                if (!model.occurrences) return [3 /*break*/, 4];
-                return [4 /*yield*/, Promise.all(model.occurrences.map(getMediaFormData))];
-            case 3:
-                formData = _a.sent();
-                formDataArgs.push.apply(formDataArgs, formData.flat());
-                _a.label = 4;
-            case 4:
-                if (!model.samples) return [3 /*break*/, 6];
-                return [4 /*yield*/, Promise.all(model.samples.map(getMediaFormData))];
-            case 5:
-                formData = _a.sent();
-                formDataArgs.push.apply(formDataArgs, formData.flat());
-                _a.label = 6;
-            case 6: return [2 /*return*/, formDataArgs];
-        }
-    });
-}); };
-function handleDuplicates(model, existingId) {
-    var fullResponse = {
-        values: {
-            id: existingId || -1,
-        },
-    };
-    if (model.occurrences) {
-        fullResponse.occurrences = model.occurrences.map(function (m) {
-            return handleDuplicates(m);
-        });
-    }
-    if (model.samples) {
-        fullResponse.samples = model.samples.map(function (m) {
-            return handleDuplicates(m);
-        });
-    }
-    if (model.media) {
-        fullResponse.media = model.media.map(function (m) {
-            return handleDuplicates(m);
-        });
-    }
-    return fullResponse;
-}
-function logTruncatedJSON(payload) {
-    try {
-        var MAX_PAYLOAD = 200000; // kb. https://develop.sentry.dev/sdk/event-payloads/
-        console.warn(JSON.stringify(payload).substring(0, MAX_PAYLOAD / 2));
-    }
-    catch (e) {
-        // do nothing
-    }
-}
-var Sample = /** @class */ (function (_super) {
-    tslib.__extends(Sample, _super);
-    function Sample(_a) {
-        if (_a === void 0) { _a = {}; }
-        var _this = this;
-        var _b = _a.metadata, metadata = _b === void 0 ? {} : _b, _c = _a.samples, samples = _c === void 0 ? [] : _c, _d = _a.occurrences, occurrences = _d === void 0 ? [] : _d, _e = _a.media, media = _e === void 0 ? [] : _e, _f = _a.attrs, attrs = _f === void 0 ? {} : _f, options = tslib.__rest(_a, ["metadata", "samples", "occurrences", "media", "attrs"]);
-        _this = _super.call(this, tslib.__assign(tslib.__assign({}, options), { attrs: tslib.__assign({}, attrs) })) || this;
-        _this.remote = mobx.observable({
-            synchronising: false,
-            url: null, // must be set up for remote sync
-            headers: {}, // auth and other headers
-            timeout: 120000, // 120s
-        });
-        _this.validateRemote = helpers.validateRemoteModel;
-        _this.error = mobx.observable({ message: '' });
-        _this.debouncedValue = 300;
-        _this.keys = function () {
-            var getRemoteProps = function (attrs) {
-                var extractRemoteIfExists = function (agg, key) {
-                    var _a;
-                    return (tslib.__assign(tslib.__assign({}, agg), (_a = {}, _a[key] = attrs[key].remote || attrs[key], _a)));
-                };
-                return Object.keys(attrs).reduce(extractRemoteIfExists, {});
-            };
-            return tslib.__assign(tslib.__assign({}, Sample.keys), getRemoteProps(_this.getSurvey().attrs || {}));
-        };
-        _this.requiresRemoteSync = function () { return !_this.syncedAt || _this.updatedAt > _this.syncedAt; };
-        _this.metadata = mobx.observable(metadata);
-        _this.samples = mobx.observable(samples);
-        _this.occurrences = mobx.observable(occurrences);
-        _this.media = mobx.observable(media);
-        // eslint-disable-next-line no-param-reassign, no-return-assign
-        var attachParent = function (model) { return (model.parent = _this); };
-        _this.samples.forEach(attachParent);
-        _this.occurrences.forEach(attachParent);
-        _this.media.forEach(attachParent);
-        var onAddedSetParentAndUpdateTime = function (change) {
-            var _a;
-            if ((_a = change.added) === null || _a === void 0 ? void 0 : _a.length) {
-                change.added.forEach(attachParent);
-                _this.setupdatedAtTimestamp(Date.now());
-            }
-            else if (change.removedCount) {
-                _this.setupdatedAtTimestamp(Date.now());
-            }
-            return change;
-        };
-        mobx.intercept(_this.samples, onAddedSetParentAndUpdateTime);
-        mobx.intercept(_this.occurrences, onAddedSetParentAndUpdateTime);
-        mobx.intercept(_this.media, onAddedSetParentAndUpdateTime);
-        return _this;
-    }
-    Sample.fromJSON = function (jsonProp, OccurrenceClass, Sample, // eslint-disable-line
-    MediaClass) {
-        var _a, _b, _c, _d, _e, _f, _g;
-        if (OccurrenceClass === void 0) { OccurrenceClass = Occurrence["default"]; }
-        if (Sample === void 0) { Sample = this; }
-        if (MediaClass === void 0) { MediaClass = Media["default"]; }
-        var json = ((_a = jsonProp === null || jsonProp === void 0 ? void 0 : jsonProp.attrs) === null || _a === void 0 ? void 0 : _a.attrs) ? jsonProp === null || jsonProp === void 0 ? void 0 : jsonProp.attrs : jsonProp;
-        var sample = new this(tslib.__assign(tslib.__assign({}, jsonProp), { attrs: json.attrs, metadata: json.metadata, createdAt: jsonProp.createdAt || ((_b = jsonProp.metadata) === null || _b === void 0 ? void 0 : _b.createdOn), updatedAt: jsonProp.updatedAt || ((_c = jsonProp.metadata) === null || _c === void 0 ? void 0 : _c.updatedOn), syncedAt: jsonProp.syncedAt || ((_d = jsonProp.metadata) === null || _d === void 0 ? void 0 : _d.syncedOn), samples: (_e = json.samples) === null || _e === void 0 ? void 0 : _e.map(function (mJson) {
-                return Sample.fromJSON(mJson, OccurrenceClass, Sample, MediaClass);
-            }), occurrences: (_f = json.occurrences) === null || _f === void 0 ? void 0 : _f.map(function (mJson) {
-                return OccurrenceClass.fromJSON(mJson, MediaClass);
-            }), media: (_g = json.media) === null || _g === void 0 ? void 0 : _g.map(function (mJson) { return MediaClass.fromJSON(mJson); }) }));
-        return sample;
-    };
-    Sample.prototype.setupdatedAtTimestamp = function (newUpdatedAt) {
-        var _a;
-        _super.prototype.setUpdatedAtTimestamp.call(this, newUpdatedAt);
-        (_a = this.parent) === null || _a === void 0 ? void 0 : _a.setupdatedAtTimestamp(newUpdatedAt);
-    };
-    /**
-     * Returns a clean (no observables) JSON representation of the model.
-     */
-    Sample.prototype.toJSON = function () {
-        var _a, _b, _c, _d;
-        var json = _super.prototype.toJSON.call(this);
-        if (!this.parent) {
-            return JSON.parse(JSON.stringify(tslib.__assign(tslib.__assign({}, json), { attrs: {
-                    attrs: json.attrs,
-                    metadata: mobx.toJS(this.metadata) || {},
-                    occurrences: this.occurrences.map(function (model) { return model.toJSON(); }) || [],
-                    samples: ((_a = this.samples) === null || _a === void 0 ? void 0 : _a.map(function (model) { return model.toJSON(); })) || [],
-                    media: ((_b = this.media) === null || _b === void 0 ? void 0 : _b.map(function (model) { return model.toJSON(); })) || [],
-                } })));
-        }
-        return JSON.parse(JSON.stringify(tslib.__assign(tslib.__assign({}, json), { metadata: mobx.toJS(this.metadata) || {}, occurrences: this.occurrences.map(function (model) { return model.toJSON(); }) || [], samples: ((_c = this.samples) === null || _c === void 0 ? void 0 : _c.map(function (model) { return model.toJSON(); })) || [], media: ((_d = this.media) === null || _d === void 0 ? void 0 : _d.map(function (model) { return model.toJSON(); })) || [] })));
-    };
-    Sample.prototype.getSurvey = function () {
-        if (!this.survey)
-            return {};
-        if (this.parent)
-            return this.parent.getSurvey().smp || {};
-        return this.survey;
-    };
-    /**
-     * Save the model to the offline store.
-     */
-    Sample.prototype.save = function () {
-        return tslib.__awaiter(this, void 0, void 0, function () {
-            var json;
-            return tslib.__generator(this, function (_a) {
-                switch (_a.label) {
-                    case 0:
-                        if (this.attrs.deleted)
-                            return [2 /*return*/]; // we don't want to store deleted samples yet
-                        if (this.parent) {
-                            this.parent.save();
-                            return [2 /*return*/];
-                        }
-                        if (!this.store) {
-                            throw new Error('Trying to sync locally without a store');
-                        }
-                        json = this.toJSON();
-                        return [4 /*yield*/, this.store.save(tslib.__assign(tslib.__assign({}, json), { data: json.attrs }))];
-                    case 1:
-                        _a.sent();
-                        return [2 /*return*/];
-                }
-            });
-        });
-    };
-    /**
-     * Destroy the model and remove from the offline store.
-     */
-    Sample.prototype.destroy = function (silent) {
-        return tslib.__awaiter(this, void 0, void 0, function () {
-            var destroySubModels;
-            var _this = this;
-            var _a;
-            return tslib.__generator(this, function (_b) {
-                switch (_b.label) {
-                    case 0:
-                        destroySubModels = function () {
-                            return Promise.all([
-                                Promise.all(_this.media.map(function (media) { return media.destroy(true); })),
-                                Promise.all(_this.occurrences.map(function (occ) { return occ.destroy(true); })),
-                            ]);
-                        };
-                        if (!this.parent) return [3 /*break*/, 2];
-                        this.parent.samples.remove(this);
-                        return [4 /*yield*/, destroySubModels()];
-                    case 1:
-                        _b.sent();
-                        if (silent)
-                            return [2 /*return*/];
-                        this.parent.save();
-                        return [2 /*return*/];
-                    case 2:
-                        if (!this.store) {
-                            throw new Error('Trying to sync locally without a store');
-                        }
-                        return [4 /*yield*/, this.store.delete(this.cid)];
-                    case 3:
-                        _b.sent();
-                        (_a = this.collection) === null || _a === void 0 ? void 0 : _a.remove(this);
-                        return [4 /*yield*/, destroySubModels()];
-                    case 4:
-                        _b.sent();
-                        this.attrs.deleted = true;
-                        return [2 /*return*/];
-                }
-            });
-        });
-    };
-    Sample.prototype.sync = function () {
-        return tslib.__awaiter(this, void 0, void 0, function () {
-            return tslib.__generator(this, function (_a) {
-                return [2 /*return*/, this.parent ? this.parent.sync() : _super.prototype.sync.call(this)];
-            });
-        });
-    };
-    Sample.prototype.saveRemote = function () {
-        return tslib.__awaiter(this, void 0, void 0, function () {
-            var warehouseMediaNames, submission, remoteResponse, timeNow, e_1;
-            return tslib.__generator(this, function (_a) {
-                switch (_a.label) {
-                    case 0:
-                        if (!this.remote.url) {
-                            throw new Error('A "remote" property is not configured.');
-                        }
-                        _a.label = 1;
-                    case 1:
-                        _a.trys.push([1, 4, , 5]);
-                        this.remote.synchronising = true;
-                        return [4 /*yield*/, this.uploadMedia()];
-                    case 2:
-                        warehouseMediaNames = _a.sent();
-                        submission = this.getSubmission(warehouseMediaNames);
-                        return [4 /*yield*/, this.postRemote(submission)];
-                    case 3:
-                        remoteResponse = _a.sent();
-                        this.remote.synchronising = false;
-                        // update the model and occurrences with new remote IDs
-                        setNewRemoteID(this, remoteResponse);
-                        timeNow = new Date().getTime();
-                        // TODO: use server times
-                        this.updatedAt = timeNow;
-                        this.syncedAt = timeNow;
-                        this.save();
-                        return [3 /*break*/, 5];
-                    case 4:
-                        e_1 = _a.sent();
-                        this.remote.synchronising = false;
-                        throw e_1;
-                    case 5: return [2 /*return*/];
-                }
-            });
-        });
-    };
-    Sample.prototype.postRemote = function (data) {
-        return tslib.__awaiter(this, void 0, void 0, function () {
-            var url, headers, _a, res, _1, e;
-            var _b, _c, _d;
-            return tslib.__generator(this, function (_e) {
-                switch (_e.label) {
-                    case 0:
-                        url = this.remote.url;
-                        if (!(typeof this.remote.headers === 'function')) return [3 /*break*/, 2];
-                        return [4 /*yield*/, this.remote.headers()];
-                    case 1:
-                        _a = _e.sent();
-                        return [3 /*break*/, 3];
-                    case 2:
-                        _a = this.remote.headers;
-                        _e.label = 3;
-                    case 3:
-                        headers = _a;
-                        _e.label = 4;
-                    case 4:
-                        _e.trys.push([4, 6, , 7]);
-                        return [4 /*yield*/, axios__default["default"].post("".concat(url, "/samples"), data, {
-                                headers: headers,
-                                timeout: 120000,
-                            })];
-                    case 5:
-                        res = _e.sent();
-                        return [2 /*return*/, res.data];
-                    case 6:
-                        _1 = _e.sent();
-                        e = _1;
-                        if (e.status === 409 && ((_b = e.response) === null || _b === void 0 ? void 0 : _b.data.duplicate_of)) {
-                            // TODO: we're doing updates so must handle sub-model IDs too
-                            return [2 /*return*/, handleDuplicates(this, e.response.data.duplicate_of.id)];
-                        }
-                        if (utils.isAxiosNetworkError(e)) {
-                            throw new utils.HandledError('Request aborted because of a network issue (timeout or similar).');
-                        }
-                        if (e.status === 400) {
-                            logTruncatedJSON(data);
-                            throw new Error(helpers.getErrorMessageFromObject((_d = (_c = e.response) === null || _c === void 0 ? void 0 : _c.data) === null || _d === void 0 ? void 0 : _d.message));
-                        }
-                        throw new Error(e.message);
-                    case 7: return [2 /*return*/];
-                }
-            });
-        });
-    };
-    Sample.prototype.fetchRemote = function () {
-        return tslib.__awaiter(this, void 0, void 0, function () {
-            return tslib.__generator(this, function (_a) {
-                throw new Error('Not implemented.');
-            });
-        });
-    };
-    Sample.prototype.updateRemote = function () {
-        return tslib.__awaiter(this, void 0, void 0, function () {
-            var warehouseMediaNames, submission, remoteResponse, timeNow, e_2;
-            return tslib.__generator(this, function (_a) {
-                switch (_a.label) {
-                    case 0:
-                        if (!this.remote.url) {
-                            throw new Error('A "remote" property is not configured.');
-                        }
-                        _a.label = 1;
-                    case 1:
-                        _a.trys.push([1, 3, , 4]);
-                        this.remote.synchronising = true;
-                        warehouseMediaNames = {};
-                        submission = this.getSubmission(warehouseMediaNames);
-                        return [4 /*yield*/, this.putRemote(this.id, submission)];
-                    case 2:
-                        remoteResponse = _a.sent();
-                        // update the model and occurrences with new remote IDs
-                        setNewRemoteID(this, remoteResponse);
-                        timeNow = new Date().getTime();
-                        // TODO: use server times
-                        this.updatedAt = timeNow;
-                        this.syncedAt = timeNow;
-                        this.save();
-                        this.remote.synchronising = false;
-                        return [3 /*break*/, 4];
-                    case 3:
-                        e_2 = _a.sent();
-                        this.remote.synchronising = false;
-                        throw e_2;
-                    case 4: return [2 /*return*/];
-                }
-            });
-        });
-    };
-    Sample.prototype.putRemote = function (sampleId, data) {
-        return tslib.__awaiter(this, void 0, void 0, function () {
-            var url, headers, _a, res, _2, e;
-            var _b, _c;
-            return tslib.__generator(this, function (_d) {
-                switch (_d.label) {
-                    case 0:
-                        url = this.remote.url;
-                        if (!(typeof this.remote.headers === 'function')) return [3 /*break*/, 2];
-                        return [4 /*yield*/, this.remote.headers()];
-                    case 1:
-                        _a = _d.sent();
-                        return [3 /*break*/, 3];
-                    case 2:
-                        _a = this.remote.headers;
-                        _d.label = 3;
-                    case 3:
-                        headers = _a;
-                        _d.label = 4;
-                    case 4:
-                        _d.trys.push([4, 6, , 7]);
-                        return [4 /*yield*/, axios__default["default"].put("".concat(url, "/samples/").concat(sampleId), data, {
-                                headers: headers,
-                                timeout: 120000,
-                            })];
-                    case 5:
-                        res = _d.sent();
-                        return [2 /*return*/, res.data];
-                    case 6:
-                        _2 = _d.sent();
-                        e = _2;
-                        if (utils.isAxiosNetworkError(e)) {
-                            throw new utils.HandledError('Request aborted because of a network issue (timeout or similar).');
-                        }
-                        if (e.status === 400) {
-                            logTruncatedJSON(data);
-                            throw new Error(helpers.getErrorMessageFromObject((_c = (_b = e.response) === null || _b === void 0 ? void 0 : _b.data) === null || _c === void 0 ? void 0 : _c.message));
-                        }
-                        throw new Error(e.message);
-                    case 7: return [2 /*return*/];
-                }
-            });
-        });
-    };
-    Sample.prototype.uploadMedia = function () {
-        return tslib.__awaiter(this, void 0, void 0, function () {
-            var warehouseMediaNames, media, hasPhotos, upload, mediaNotInRemote, twelveHrsAgo, chunk, _loop_1, index;
-            var _this = this;
-            return tslib.__generator(this, function (_a) {
-                switch (_a.label) {
-                    case 0:
-                        warehouseMediaNames = {};
-                        return [4 /*yield*/, getMediaFormData(this)];
-                    case 1:
-                        media = _a.sent();
-                        hasPhotos = media.length;
-                        if (!hasPhotos)
-                            return [2 /*return*/, warehouseMediaNames];
-                        upload = function (data) { return tslib.__awaiter(_this, void 0, void 0, function () {
-                            var url, headers, _a, res, e_3;
-                            return tslib.__generator(this, function (_b) {
-                                switch (_b.label) {
-                                    case 0:
-                                        url = this.remote.url;
-                                        if (!(typeof this.remote.headers === 'function')) return [3 /*break*/, 2];
-                                        return [4 /*yield*/, this.remote.headers()];
-                                    case 1:
-                                        _a = _b.sent();
-                                        return [3 /*break*/, 3];
-                                    case 2:
-                                        _a = this.remote.headers;
-                                        _b.label = 3;
-                                    case 3:
-                                        headers = _a;
-                                        _b.label = 4;
-                                    case 4:
-                                        _b.trys.push([4, 6, , 7]);
-                                        return [4 /*yield*/, axios__default["default"].post("".concat(url, "/media-queue"), data, {
-                                                headers: headers,
-                                                timeout: 120000,
-                                            })];
-                                    case 5:
-                                        res = _b.sent();
-                                        return [2 /*return*/, res.data];
-                                    case 6:
-                                        e_3 = _b.sent();
-                                        if (e_3.message === 'timeout') {
-                                            throw new utils.HandledError('Request aborted because of a network issue (timeout or similar).');
-                                        }
-                                        throw e_3;
-                                    case 7: return [2 /*return*/];
-                                }
-                            });
-                        }); };
-                        mediaNotInRemote = [];
-                        twelveHrsAgo = Date.now() - 1000 * 60 * 60 * 12;
-                        media.forEach(function (m) {
-                            var model = m[0];
-                            if (model.syncedAt > twelveHrsAgo && model.attrs.queued) {
-                                warehouseMediaNames[model.cid] = { name: model.attrs.queued };
-                                return;
-                            }
-                            mediaNotInRemote.push(m);
-                        });
-                        chunk = 5;
-                        _loop_1 = function (index) {
-                            var mediaChunkToUpload, data, ids, now;
-                            return tslib.__generator(this, function (_b) {
-                                switch (_b.label) {
-                                    case 0:
-                                        mediaChunkToUpload = mediaNotInRemote.slice(index, index + chunk);
-                                        data = new FormData();
-                                        mediaChunkToUpload.forEach(function (_a) {
-                                            var formData = _a[1];
-                                            return data.append.apply(data, formData);
-                                        });
-                                        return [4 /*yield*/, upload(data)];
-                                    case 1:
-                                        ids = _b.sent();
-                                        now = new Date().getTime();
-                                        mediaChunkToUpload.forEach(function (_a) {
-                                            var m = _a[0];
-                                            m.syncedAt = now;
-                                            m.attrs.queued = ids[m.cid].name;
-                                        });
-                                        warehouseMediaNames = tslib.__assign(tslib.__assign({}, warehouseMediaNames), ids);
-                                        return [2 /*return*/];
-                                }
-                            });
-                        };
-                        index = 0;
-                        _a.label = 2;
-                    case 2:
-                        if (!(index < mediaNotInRemote.length)) return [3 /*break*/, 5];
-                        return [5 /*yield**/, _loop_1(index)];
-                    case 3:
-                        _a.sent();
-                        _a.label = 4;
-                    case 4:
-                        index += chunk;
-                        return [3 /*break*/, 2];
-                    case 5: return [2 /*return*/, warehouseMediaNames];
-                }
-            });
-        });
-    };
-    Sample.prototype.getSubmission = function (warehouseMediaNames) {
-        var _this = this;
-        if (warehouseMediaNames === void 0) { warehouseMediaNames = {}; }
-        var sampleKeys = typeof this.keys === 'function' ? this.keys() : this.keys;
-        var keys = tslib.__assign(tslib.__assign({}, Sample.keys), sampleKeys); // warehouse keys/values to transform
-        var submission = {
-            values: {
-                external_key: this.cid,
-            },
-            media: [],
-            samples: [],
-            occurrences: [],
-        };
-        if (this.id) {
-            submission.values.id = this.id;
-        }
-        var mapValue = function (attr, value) {
-            var valuesMapping = keys[attr].values;
-            if (!valuesMapping) {
-                return value;
-            }
-            if (typeof valuesMapping === 'function') {
-                return valuesMapping(value, submission, _this);
-            }
-            if (value instanceof Array) {
-                return value.map(function (v) { return mapValue(attr, v); });
-            }
-            if (valuesMapping instanceof Array) {
-                var mapping = valuesMapping.find(function (_a) {
-                    var val = _a.value;
-                    return val === value;
-                });
-                if (!mapping || !mapping.id) {
-                    throw new Error("A \"".concat(attr, "\" attribute \"").concat(value, "\" value could not be mapped to a remote database field."));
-                }
-                return mapping.id;
-            }
-            return valuesMapping[value];
-        };
-        var getValue = function (attr) {
-            var value = _this.attrs[attr];
-            var isEmpty = function (val) { return val === null || val === undefined; };
-            if (isEmpty(value)) {
-                return;
-            }
-            if (!keys[attr]) {
-                attr = attr.includes('smpAttr:') ? attr : lodash.snakeCase(attr);
-                submission.values[attr] = value;
-                return;
-            }
-            value = mapValue(attr, value);
-            if (isEmpty(value)) {
-                return;
-            }
-            var warehouseAttr = keys[attr].id || attr;
-            var attrKey = !Number.isNaN(Number(warehouseAttr))
-                ? "smpAttr:".concat(warehouseAttr)
-                : warehouseAttr;
-            attrKey = attrKey.includes('smpAttr:') ? attrKey : lodash.snakeCase(attrKey);
-            submission.values[attrKey] = value;
-        };
-        Object.keys(this.attrs).forEach(getValue);
-        this.samples.forEach(function (model) {
-            if (_this.attrs.training)
-                model.attrs.training = _this.attrs.training; // eslint-disable-line no-param-reassign
-            var modelSubmission = model.getSubmission(warehouseMediaNames);
-            if (!modelSubmission)
-                return;
-            submission.samples.push(modelSubmission);
-        });
-        this.occurrences.forEach(function (model) {
-            if (_this.attrs.training)
-                model.attrs.training = _this.attrs.training; // eslint-disable-line no-param-reassign
-            var modelSubmission = model.getSubmission(warehouseMediaNames);
-            if (!modelSubmission)
-                return;
-            submission.occurrences.push(modelSubmission);
-        });
-        this.media.forEach(function (model) {
-            var modelSubmission = model.getSubmission(warehouseMediaNames);
-            if (!modelSubmission)
-                return;
-            submission.media.push(modelSubmission);
-        });
-        var survey = this.getSurvey();
-        if (survey.modifySubmission) {
-            return survey.modifySubmission(submission, this);
-        }
-        return submission;
-    };
-    Sample.prototype.isUploaded = function () {
-        if (this.parent) {
-            return this.parent.isUploaded();
-        }
-        return !!this.syncedAt;
-    };
-    Sample.prototype.isDisabled = function () {
-        return this.isUploaded();
-    };
-    /**
-     * Warehouse attributes and their values.
-     */
-    Sample.keys = {
-        location: { id: 'entered_sref' },
-        location_type: {
-            id: 'entered_sref_system',
-            values: {
-                british: 'OSGB', // for British National Grid
-                irish: 'OSIE', // for Irish Grid
-                channel: 'utm30ed50', // for Channel Islands Grid
-                latlon: 4326, // for Latitude and Longitude in decimal form (WGS84 datum)
-            },
-        },
-        group: { id: 'group_id' },
-        training: { id: 'training', values: helpers.boolToWarehouseValue },
-        deleted: { id: 'deleted', values: helpers.boolToWarehouseValue },
-    };
-    return Sample;
-}(Model["default"]));
-
-exports["default"] = Sample;
-exports.getMediaFormData = getMediaFormData;
+"use strict";Object.defineProperty(exports,"__esModule",{value:!0});var e=require("tslib"),t=require("mobx"),r=require("axios"),s=require("lodash"),a=require("wellknown"),n=require("@flumens/utils"),i=require("../Model.js"),o=require("./ElasticOccurrence.js"),u=require("./ElasticSample.js"),c=require("./Media.js"),d=require("./Occurrence.js"),l=require("./helpers.js");function p(e){return e&&"object"==typeof e&&"default"in e?e:{default:e}}var m=p(r),h=p(a),f=function(t,r){return void 0===r&&(r={}),function(s){return s instanceof t?s:new t(e.__assign(e.__assign({},s),r))}};function v(e,t){var r,s,a,n;if(null==t?void 0:t.values)e.id=t.values.id,e.samples&&t.samples&&(null===(s=e.samples)||void 0===s||s.forEach((function(e,r){return v(e,t.samples[r])}))),e.occurrences&&t.occurrences&&(null===(a=e.occurrences)||void 0===a||a.forEach((function(e,r){return v(e,t.occurrences[r])}))),e.media&&t.media&&(null===(n=e.media)||void 0===n||n.forEach((function(e,r){return v(e,t.media[r])})));else{if("test"===(null===(r=null===process||void 0===process?void 0:process.env)||void 0===r?void 0:r.NODE_ENV))return;console.warn("Model didn't receive an id from the server")}}var _=function(t){return e.__awaiter(void 0,void 0,void 0,(function(){var r,s,a;return e.__generator(this,(function(n){switch(n.label){case 0:return r=[],t.media?(s=function(t){return e.__awaiter(void 0,void 0,void 0,(function(){var r;return e.__generator(this,(function(e){switch(e.label){case 0:return[4,t.getFormData()];case 1:return r=e.sent(),[2,[t,r]]}}))}))},[4,Promise.all(t.media.map(s))]):[3,2];case 1:a=n.sent(),r.push.apply(r,a),n.label=2;case 2:return t.occurrences?[4,Promise.all(t.occurrences.map(_))]:[3,4];case 3:a=n.sent(),r.push.apply(r,a.flat()),n.label=4;case 4:return t.samples?[4,Promise.all(t.samples.map(_))]:[3,6];case 5:a=n.sent(),r.push.apply(r,a.flat()),n.label=6;case 6:return[2,r]}}))}))};function g(e,t){var r={values:{id:t||-1}};return e.occurrences&&(r.occurrences=e.occurrences.map((function(e){return g(e)}))),e.samples&&(r.samples=e.samples.map((function(e){return g(e)}))),e.media&&(r.media=e.media.map((function(e){return g(e)}))),r}function y(e){try{console.warn(JSON.stringify(e).substring(0,1e5))}catch(e){}}var b=function(r){function a(s){void 0===s&&(s={});var n=this,i=s.metadata,o=void 0===i?{}:i,u=s.samples,p=void 0===u?[]:u,m=s.occurrences,h=void 0===m?[]:m,v=s.media,_=void 0===v?[]:v,g=s.Sample,y=void 0===g?a:g,b=s.Occurrence,w=void 0===b?d.default:b,S=s.Media,A=void 0===S?c.default:S,O=s.skipStore,E=e.__rest(s,["metadata","samples","occurrences","media","Sample","Occurrence","Media","skipStore"]);E.createdAt=E.createdAt||(null==o?void 0:o.createdOn),E.updatedAt=E.updatedAt||(null==o?void 0:o.updatedOn),E.syncedAt=E.syncedAt||(null==o?void 0:o.syncedOn);var k=O?void 0:E.store;(n=r.call(this,e.__assign(e.__assign({},E),{store:k}))||this).remote=t.observable({synchronising:!1,url:null,getAccessToken:function(){return Promise.resolve("auth token is missing")},timeout:12e4}),n.validateRemote=l.validateRemoteModel,n.error=t.observable({message:""}),n.debouncedValue=300,n.keys=function(){var t;return e.__assign(e.__assign({},a.keys),(t=n.getSurvey().attrs||{},Object.keys(t).reduce((function(r,s){var a;return e.__assign(e.__assign({},r),((a={})[s]=t[s].remote||t[s],a))}),{})))},n.requiresRemoteSync=function(){return!n.syncedAt||n.updatedAt>n.syncedAt},n.Sample=y,n.Occurrence=w,n.Media=A,n.metadata=t.observable(o);var T=p.map(f(n.Sample));n.samples=t.observable(T);var N=h.map(f(n.Occurrence,{Media:n.Media}));n.occurrences=t.observable(N);var q=_.map(f(n.Media));n.media=t.observable(q);var R=function(e){return e.parent=n};n.samples.forEach(R),n.occurrences.forEach(R),n.media.forEach(R);var j=function(e){var t;return(null===(t=e.added)||void 0===t?void 0:t.length)?(e.added.forEach(R),n.setUpdatedAtTimestamp(Date.now())):e.removedCount&&n.setUpdatedAtTimestamp(Date.now()),e};return t.intercept(n.samples,j),t.intercept(n.occurrences,j),t.intercept(n.media,j),n}return e.__extends(a,r),a.parseRemoteJSON=function(t,r,s){var a,n=t.id,i=t.event,o=t.location,u=t.metadata,c=new Date(i.date_start),d=new Date(u.updated_on).getTime(),p=Date.now(),m=o.point.split(",").map(parseFloat),f=m[0],v=m[1],_="OSGB"===o.output_sref_system?o.output_sref:"",g=o.geom?h.default.parse(o.geom):null,y=i.parent_event_id,b=l.parseRemoteAttrs(y?null==s?void 0:s.smp.attrs:null==s?void 0:s.attrs,i.attributes||[]),w=null===(a=i.media)||void 0===a?void 0:a.map((function(e){var t=e.path;return{id:t,metadata:{updatedOn:c,createdOn:c,syncedOn:c},data:{data:"".concat(r,"/upload/").concat(t)}}}));return{id:n,cid:i.source_system_key||n,createdAt:c.getTime(),updatedAt:d,syncedAt:p,metadata:{saved:!0},data:e.__assign(e.__assign({},b),{surveyId:u.survey.id,date:c.toISOString(),location:{code:o.code,name:o.name||o.verbatim_locality,latitude:f,longitude:v,shape:g,gridref:_},enteredSrefSystem:4326,group:u.group,comment:i.event_remarks,training:"true"===u.trial}),media:w}},Object.defineProperty(a.prototype,"isStored",{get:function(){return this.store},enumerable:!1,configurable:!0}),a.prototype.setUpdatedAtTimestamp=function(e){var t;r.prototype.setUpdatedAtTimestamp.call(this,e),null===(t=this.parent)||void 0===t||t.setUpdatedAtTimestamp(e)},a.prototype.toJSON=function(){var s,a,n,i=r.prototype.toJSON.call(this);return n=e.__assign(e.__assign({},i),{metadata:t.toJS(this.metadata)||{},occurrences:this.occurrences.map((function(e){return e.toJSON()}))||[],samples:(null===(s=this.samples)||void 0===s?void 0:s.map((function(e){return e.toJSON()})))||[],media:(null===(a=this.media)||void 0===a?void 0:a.map((function(e){return e.toJSON()})))||[]}),JSON.parse(JSON.stringify(n))},a.prototype.getSurvey=function(){return this.survey?this.parent?this.parent.getSurvey().smp||{}:this.survey:{}},a.prototype.save=function(){return e.__awaiter(this,void 0,void 0,(function(){var t,r,s,a,n,i,o,u;return e.__generator(this,(function(c){switch(c.label){case 0:if(this.data.deleted)return[2];if(this.parent)return this.parent.save(),[2];if(!this.store)throw new Error("Trying to sync locally without a store");return t=this.toJSON(),r=t.data,s=t.metadata,a=t.occurrences,n=t.samples,i=t.media,o=e.__rest(t,["data","metadata","occurrences","samples","media"]),u=e.__assign(e.__assign({},o),{data:{data:r,metadata:s,occurrences:a,samples:n,media:i}}),[4,this.store.save(u)];case 1:return c.sent(),[2]}}))}))},a.prototype.destroy=function(t){return e.__awaiter(this,void 0,void 0,(function(){var r,s,a=this;return e.__generator(this,(function(e){switch(e.label){case 0:return r=function(){return Promise.all([Promise.all(a.media.map((function(e){return e.destroy(!0)}))),Promise.all(a.occurrences.map((function(e){return e.destroy(!0)})))])},this.parent?(this.parent.samples.remove(this),[4,r()]):[3,2];case 1:return e.sent(),t?[2]:(this.parent.save(),[2]);case 2:if(!this.store)throw new Error("Trying to sync locally without a store");return[4,this.store.delete(this.cid)];case 3:return e.sent(),null===(s=this.collection)||void 0===s||s.remove(this),[4,r()];case 4:return e.sent(),this.data.deleted=!0,[2]}}))}))},a.prototype.sync=function(){return e.__awaiter(this,void 0,void 0,(function(){return e.__generator(this,(function(e){return[2,this.parent?this.parent.sync():r.prototype.sync.call(this)]}))}))},a.prototype.saveRemote=function(){return e.__awaiter(this,void 0,void 0,(function(){var t,r,s,a,n;return e.__generator(this,(function(e){switch(e.label){case 0:if(!this.remote.url||this.remote.url.includes("index.php"))throw new Error('A "remote" property is not configured.');e.label=1;case 1:return e.trys.push([1,4,,5]),this.remote.synchronising=!0,[4,this.uploadMedia()];case 2:return t=e.sent(),r=this.getSubmission(t),[4,this.postRemote(r)];case 3:return s=e.sent(),this.remote.synchronising=!1,v(this,s),a=(new Date).getTime(),this.updatedAt=a,this.syncedAt=a,this.save(),[3,5];case 4:throw n=e.sent(),this.remote.synchronising=!1,n;case 5:return[2]}}))}))},a.prototype.postRemote=function(t){return e.__awaiter(this,void 0,void 0,(function(){var r,s,a,i,o,u,c,d;return e.__generator(this,(function(e){switch(e.label){case 0:return e.trys.push([0,3,,4]),o={},s="Bearer ".concat,[4,this.remote.getAccessToken()];case 1:return o.Authorization=s.apply("Bearer ",[e.sent()]),r=o,[4,m.default.post("".concat(this.remote.url,"/index.php/services/rest/samples"),t,{headers:r,timeout:12e4})];case 2:return[2,e.sent().data];case 3:if(a=e.sent(),409===(i=a).status&&(null===(u=i.response)||void 0===u?void 0:u.data.duplicate_of))return[2,g(this,i.response.data.duplicate_of.id)];if(n.isAxiosNetworkError(i))throw new n.HandledError("Request aborted because of a network issue (timeout or similar).");if(400===i.status)throw y(t),new Error(l.getErrorMessageFromObject(null===(d=null===(c=i.response)||void 0===c?void 0:c.data)||void 0===d?void 0:d.message));throw new Error(i.message);case 4:return[2]}}))}))},a.prototype.fetchRemote=function(){return e.__awaiter(this,void 0,void 0,(function(){var t,r,s,a,n,i,c,d,l,p,m,h,f,v,_,g,y,b,w,S,A=this;return e.__generator(this,(function(O){switch(O.label){case 0:if(!this.remote.url||this.remote.url.includes("index.php"))throw new Error('A "remote" property is not configured.');if(!this.cid)throw new Error("Sample cid or id is missing for fetching remote model.");return t=this.remote.url,[4,this.remote.getAccessToken()];case 1:return r=O.sent(),[4,u.fetchElasticSample({id:this.id,cid:this.cid,url:t,accessToken:r})];case 2:return s=O.sent(),this.data.surveyId||(this.data.surveyId=s.metadata.survey.id),a=this.getSurvey(),n=this.Sample.parseRemoteJSON(s,this.remote.url,a),this.id=n.id,this.cid=n.cid||this.cid,Object.assign(this.data,n.data),Object.assign(this.metadata,n.metadata),i=u.fetchElasticSubSamples({parentId:this.id,url:t,accessToken:r}),c=o.fetchElasticOccurrences({parentId:this.id,url:t,accessToken:r}),[4,Promise.all([i,c])];case 3:return d=O.sent(),l=d[0],p=d[1],m=(new Date).getTime(),h=function(e){var t=A.Sample.parseRemoteJSON(e,A.remote.url,A.getSurvey()),r=new A.Sample(t);return r.syncedAt=m,r},f=l.map(h),v=function(t,r){var s;return e.__assign(e.__assign({},t),((s={})[r.id]=r,s))},_=f.reduce(v,((w={})[this.id]=this,w)),this.samples.clear(),(S=this.samples).push.apply(S,f),g=function(e){var t=A.Occurrence.parseRemoteJSON(e,A.remote.url,A.getSurvey()),r=new A.Occurrence(t);return r.syncedAt=m,[r,e.event.event_id]},y=p.map(g),b=function(e){var t=e[0],r=e[1];r!==parseInt(A.id,10)?_[r]?_[r].occurrences.push(t):console.error("Can't attach occ to missing ".concat(r," sample")):A.occurrences.push(t)},y.forEach(b),this.syncedAt=m,[2]}}))}))},a.prototype.updateRemote=function(){return e.__awaiter(this,void 0,void 0,(function(){var t,r,s,a;return e.__generator(this,(function(e){switch(e.label){case 0:if(!this.remote.url||this.remote.url.includes("index.php"))throw new Error('A "remote" property is not configured.');e.label=1;case 1:return e.trys.push([1,3,,4]),this.remote.synchronising=!0,t={},r=this.getSubmission(t),[4,this.putRemote(this.id,r)];case 2:return v(this,e.sent()),s=(new Date).getTime(),this.updatedAt=s,this.syncedAt=s,this.save(),this.remote.synchronising=!1,[3,4];case 3:throw a=e.sent(),this.remote.synchronising=!1,a;case 4:return[2]}}))}))},a.prototype.putRemote=function(t,r){return e.__awaiter(this,void 0,void 0,(function(){var s,a,i,o,u,c,d;return e.__generator(this,(function(e){switch(e.label){case 0:return u={},a="Bearer ".concat,[4,this.remote.getAccessToken()];case 1:u.Authorization=a.apply("Bearer ",[e.sent()]),s=u,e.label=2;case 2:return e.trys.push([2,4,,5]),[4,m.default.put("".concat(this.remote.url,"/samples/").concat(t),r,{headers:s,timeout:12e4})];case 3:return[2,e.sent().data];case 4:if(i=e.sent(),o=i,n.isAxiosNetworkError(o))throw new n.HandledError("Request aborted because of a network issue (timeout or similar).");if(400===o.status)throw y(r),new Error(l.getErrorMessageFromObject(null===(d=null===(c=o.response)||void 0===c?void 0:c.data)||void 0===d?void 0:d.message));throw new Error(o.message);case 5:return[2]}}))}))},a.prototype.uploadMedia=function(){return e.__awaiter(this,void 0,void 0,(function(){var t,r,s,a,i,o,u,c,d=this;return e.__generator(this,(function(l){switch(l.label){case 0:return t={},[4,_(this)];case 1:if(r=l.sent(),!r.length)return[2,t];s=function(t){return e.__awaiter(d,void 0,void 0,(function(){var r,s,a,i;return e.__generator(this,(function(e){switch(e.label){case 0:return i={},s="Bearer ".concat,[4,this.remote.getAccessToken()];case 1:i.Authorization=s.apply("Bearer ",[e.sent()]),r=i,e.label=2;case 2:return e.trys.push([2,4,,5]),[4,m.default.post("".concat(this.remote.url,"/media-queue"),t,{headers:r,timeout:12e4})];case 3:return[2,e.sent().data];case 4:if("timeout"===(a=e.sent()).message)throw new n.HandledError("Request aborted because of a network issue (timeout or similar).");throw a;case 5:return[2]}}))}))},a=[],i=Date.now()-432e5,r.forEach((function(e){var r=e[0];r.syncedAt>i&&r.data.queued?t[r.cid]={name:r.data.queued}:a.push(e)})),o=5,u=function(r){var n,i,u,c;return e.__generator(this,(function(d){switch(d.label){case 0:return n=a.slice(r,r+o),i=new FormData,n.forEach((function(e){var t=e[1];return i.append.apply(i,t)})),[4,s(i)];case 1:return u=d.sent(),c=(new Date).getTime(),n.forEach((function(e){var t=e[0];t.syncedAt=c,t.data.queued=u[t.cid].name})),t=e.__assign(e.__assign({},t),u),[2]}}))},c=0,l.label=2;case 2:return c<a.length?[5,u(c)]:[3,5];case 3:l.sent(),l.label=4;case 4:return c+=o,[3,2];case 5:return[2,t]}}))}))},a.prototype.getSubmission=function(t){var r=this;void 0===t&&(t={});var n="function"==typeof this.keys?this.keys():this.keys,i=e.__assign(e.__assign({},a.keys),n),o={values:{external_key:this.cid},media:[],samples:[],occurrences:[]};this.id&&(o.values.id=this.id);var u=function(e,t){var s=i[e].values;if(!s)return t;if("function"==typeof s)return s(t,o,r);if(t instanceof Array)return t.map((function(t){return u(e,t)}));if(s instanceof Array){var a=s.find((function(e){return e.value===t}));if(!a||!a.id)throw new Error('A "'.concat(e,'" attribute "').concat(t,'" value could not be mapped to a remote database field.'));return a.id}return s[t]};Object.keys(this.data).forEach((function(e){var t=r.data[e],a=function(e){return null==e};if(!a(t)){if(!i[e])return e=e.includes("smpAttr:")?e:s.snakeCase(e),void(o.values[e]=t);if(!a(t=u(e,t))){var n=i[e].id||e,c=Number.isNaN(Number(n))?n:"smpAttr:".concat(n);c=c.includes("smpAttr:")?c:s.snakeCase(c),o.values[c]=t}}})),this.samples.forEach((function(e){r.data.training&&(e.data.training=r.data.training);var s=e.getSubmission(t);s&&o.samples.push(s)})),this.occurrences.forEach((function(e){r.data.training&&(e.data.training=r.data.training);var s=e.getSubmission(t);s&&o.occurrences.push(s)})),this.media.forEach((function(e){var r=e.getSubmission(t);r&&o.media.push(r)}));var c=this.getSurvey();return c.modifySubmission?c.modifySubmission(o,this):o},Object.defineProperty(a.prototype,"isUploaded",{get:function(){return this.parent?this.parent.isUploaded:!!this.syncedAt},enumerable:!1,configurable:!0}),Object.defineProperty(a.prototype,"isDisabled",{get:function(){return this.isUploaded},enumerable:!1,configurable:!0}),a.keys={location:{id:"entered_sref"},location_type:{id:"entered_sref_system",values:{british:"OSGB",irish:"OSIE",channel:"utm30ed50",latlon:4326}},group:{id:"group_id"},training:{id:"training",values:l.boolToWarehouseValue},deleted:{id:"deleted",values:l.boolToWarehouseValue}},a}(i.default);exports.default=b,exports.getMediaFormData=_;