@fideus-labs/ngff-zarr 0.7.5 → 0.9.0

package/esm/browser-mod.d.ts

@@ -12,8 +12,8 @@ export * from "./schemas/multiscales.js";
 export { isValidDimension, isValidUnit, validateMetadata, } from "./utils/validation.js";
 export { createAxis, createDataset, createMetadata, createMultiscales, createNgffImage, } from "./utils/factory.js";
 export { getMethodMetadata } from "./utils/method_metadata.js";
-export { computeOmeroFromMultiscales, computeOmeroFromNgffImage, getDefaultColors, GLASBEY_COLORS, isUsingWorker, terminateOmeroWorker, } from "./utils/compute_omero-browser.js";
-export type { ComputeOmeroFromMultiscalesOptions, ComputeOmeroOptions, } from "./utils/compute_omero-browser.js";
+export { computeOmeroFromMultiscales, computeOmeroFromNgffImage, getDefaultColors, GLASBEY_COLORS, terminateOmeroWorkerPool, } from "./utils/compute_omero.js";
+export type { ComputeOmeroFromMultiscalesOptions, ComputeOmeroOptions, } from "./utils/compute_omero.js";
 export { buildOmeroFromAccumulators, computeChannelStatistics, createAccumulator, extractChannel, finalizeStatistics, QUANTILE_SAMPLE_SIZE, updateAccumulator, validateQuantiles, } from "./utils/compute_omero-shared.js";
 export type { ChannelStatisticsAccumulator } from "./utils/compute_omero-shared.js";
 export { terminateWorkerPool, zarrGet, zarrSet } from "./utils/worker_pool.js";

package/esm/browser-mod.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"browser-mod.d.ts","sourceRoot":"","sources":["../src/browser-mod.ts"],"names":[],"mappings":"AAOA,cAAc,kBAAkB,CAAC;AACjC,cAAc,oBAAoB,CAAC;AACnC,cAAc,4BAA4B,CAAC;AAC3C,cAAc,0BAA0B,CAAC;AACzC,cAAc,uBAAuB,CAAC;AACtC,cAAc,wBAAwB,CAAC;AAEvC,cAAc,oBAAoB,CAAC;AACnC,cAAc,sBAAsB,CAAC;AACrC,cAAc,4BAA4B,CAAC;AAC3C,cAAc,yBAAyB,CAAC;AACxC,cAAc,0BAA0B,CAAC;AAEzC,OAAO,EACL,gBAAgB,EAChB,WAAW,EACX,gBAAgB,GACjB,MAAM,uBAAuB,CAAC;AAC/B,OAAO,EACL,UAAU,EACV,aAAa,EACb,cAAc,EACd,iBAAiB,EACjB,eAAe,GAChB,MAAM,oBAAoB,CAAC;AAC5B,OAAO,EAAE,iBAAiB,EAAE,MAAM,4BAA4B,CAAC;AAE/D,OAAO,EACL,2BAA2B,EAC3B,yBAAyB,EACzB,gBAAgB,EAChB,cAAc,EACd,wBAAwB,GACzB,MAAM,0BAA0B,CAAC;AAClC,YAAY,EACV,kCAAkC,EAClC,mBAAmB,GACpB,MAAM,0BAA0B,CAAC;AAGlC,OAAO,EACL,0BAA0B,EAC1B,wBAAwB,EACxB,iBAAiB,EACjB,cAAc,EACd,kBAAkB,EAClB,oBAAoB,EACpB,iBAAiB,EACjB,iBAAiB,GAClB,MAAM,iCAAiC,CAAC;AACzC,YAAY,EAAE,4BAA4B,EAAE,MAAM,iCAAiC,CAAC;AACpF,OAAO,EAAE,mBAAmB,EAAE,OAAO,EAAE,OAAO,EAAE,MAAM,wBAAwB,CAAC;AAK/E,OAAO,EACL,KAAK,UAAU,EACf,YAAY,EACZ,KAAK,mBAAmB,EACxB,KAAK,WAAW,GACjB,MAAM,gCAAgC,CAAC;AACxC,OAAO,EACL,SAAS,EACT,UAAU,EACV,KAAK,iBAAiB,EACtB,aAAa,EACb,KAAK,oBAAoB,GAC1B,MAAM,8BAA8B,CAAC;AAGtC,OAAO,EACL,2BAA2B,EAC3B,cAAc,EACd,gBAAgB,EAChB,iBAAiB,EACjB,cAAc,GACf,MAAM,kBAAkB,CAAC;AAC1B,YAAY,EAAE,uBAAuB,EAAE,MAAM,kBAAkB,CAAC;AAGhE,cAAc,qCAAqC,CAAC;AAGpD,OAAO,EACL,mBAAmB,EACnB,KAAK,0BAA0B,GAChC,MAAM,iCAAiC,CAAC"}

package/esm/browser-mod.js

@@ -19,8 +19,8 @@ export * from "./schemas/multiscales.js";
 export { isValidDimension, isValidUnit, validateMetadata, } from "./utils/validation.js";
 export { createAxis, createDataset, createMetadata, createMultiscales, createNgffImage, } from "./utils/factory.js";
 export { getMethodMetadata } from "./utils/method_metadata.js";
-// Browser-specific OMERO computation with WebWorker support
-export { computeOmeroFromMultiscales, computeOmeroFromNgffImage, getDefaultColors, GLASBEY_COLORS, isUsingWorker, terminateOmeroWorker, } from "./utils/compute_omero-browser.js";
+// OMERO computation with WorkerPool
+export { computeOmeroFromMultiscales, computeOmeroFromNgffImage, getDefaultColors, GLASBEY_COLORS, terminateOmeroWorkerPool, } from "./utils/compute_omero.js";
 // Shared OMERO computation functions for benchmarking and direct use
 export { buildOmeroFromAccumulators, computeChannelStatistics, createAccumulator, extractChannel, finalizeStatistics, QUANTILE_SAMPLE_SIZE, updateAccumulator, validateQuantiles, } from "./utils/compute_omero-shared.js";
 export { terminateWorkerPool, zarrGet, zarrSet } from "./utils/worker_pool.js";

package/esm/browser-mod.js.map

@@ -1 +1 @@
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+{"version":3,"file":"browser-mod.js","sourceRoot":"","sources":["../src/browser-mod.ts"],"names":[],"mappings":"AAAA,wDAAwD;AACxD,+BAA+B;AAC/B,oCAAoC;AACpC,wEAAwE;AACxE,EAAE;AACF,kFAAkF;AAClF,yEAAyE;AACzE,cAAc,kBAAkB,CAAC;AACjC,cAAc,oBAAoB,CAAC;AACnC,cAAc,4BAA4B,CAAC;AAC3C,cAAc,0BAA0B,CAAC;AACzC,cAAc,uBAAuB,CAAC;AACtC,cAAc,wBAAwB,CAAC;AAEvC,cAAc,oBAAoB,CAAC;AACnC,cAAc,sBAAsB,CAAC;AACrC,cAAc,4BAA4B,CAAC;AAC3C,cAAc,yBAAyB,CAAC;AACxC,cAAc,0BAA0B,CAAC;AAEzC,OAAO,EACL,gBAAgB,EAChB,WAAW,EACX,gBAAgB,GACjB,MAAM,uBAAuB,CAAC;AAC/B,OAAO,EACL,UAAU,EACV,aAAa,EACb,cAAc,EACd,iBAAiB,EACjB,eAAe,GAChB,MAAM,oBAAoB,CAAC;AAC5B,OAAO,EAAE,iBAAiB,EAAE,MAAM,4BAA4B,CAAC;AAC/D,oCAAoC;AACpC,OAAO,EACL,2BAA2B,EAC3B,yBAAyB,EACzB,gBAAgB,EAChB,cAAc,EACd,wBAAwB,GACzB,MAAM,0BAA0B,CAAC;AAMlC,qEAAqE;AACrE,OAAO,EACL,0BAA0B,EAC1B,wBAAwB,EACxB,iBAAiB,EACjB,cAAc,EACd,kBAAkB,EAClB,oBAAoB,EACpB,iBAAiB,EACjB,iBAAiB,GAClB,MAAM,iCAAiC,CAAC;AAEzC,OAAO,EAAE,mBAAmB,EAAE,OAAO,EAAE,OAAO,EAAE,MAAM,wBAAwB,CAAC;AAE/E,iCAAiC;AACjC,0EAA0E;AAC1E,iFAAiF;AACjF,OAAO,EAEL,YAAY,GAGb,MAAM,gCAAgC,CAAC;AACxC,OAAO,EACL,SAAS,EACT,UAAU,EAEV,aAAa,GAEd,MAAM,8BAA8B,CAAC;AAEtC,gBAAgB;AAChB,OAAO,EACL,2BAA2B,EAC3B,cAAc,EACd,gBAAgB,EAChB,iBAAiB,EACjB,cAAc,GACf,MAAM,kBAAkB,CAAC;AAG1B,wCAAwC;AACxC,cAAc,qCAAqC,CAAC;AAEpD,gCAAgC;AAChC,OAAO,EACL,mBAAmB,GAEpB,MAAM,iCAAiC,CAAC"}

package/esm/io/itk_image_to_ngff_image.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"itk_image_to_ngff_image.d.ts","sourceRoot":"","sources":["../../src/io/itk_image_to_ngff_image.ts"],"names":[],"mappings":"AAEA;;GAEG;AAEH,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,UAAU,CAAC;AAGtC,OAAO,EAAE,SAAS,EAAE,MAAM,wBAAwB,CAAC;AAQnD,MAAM,WAAW,0BAA0B;IACzC;;;OAGG;IACH,wBAAwB,CAAC,EAAE,OAAO,CAAC;IAEnC;;;OAGG;IACH,IAAI,CAAC,EAAE,MAAM,CAAC;IAEd;;;;;OAKG;IACH,MAAM,CAAC,EAAE,MAAM,GAAG,MAAM,EAAE,CAAC;CAC5B;AAED;;;;;;;;;;GAUG;AACH,wBAAsB,mBAAmB,CACvC,QAAQ,EAAE,KAAK,EACf,OAAO,GAAE,0BAA+B,GACvC,OAAO,CAAC,SAAS,CAAC,CAuHpB"}
+{"version":3,"file":"itk_image_to_ngff_image.d.ts","sourceRoot":"","sources":["../../src/io/itk_image_to_ngff_image.ts"],"names":[],"mappings":"AAEA;;GAEG;AAEH,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,UAAU,CAAC;AAKtC,OAAO,EAAE,SAAS,EAAE,MAAM,wBAAwB,CAAC;AAMnD,MAAM,WAAW,0BAA0B;IACzC;;;OAGG;IACH,wBAAwB,CAAC,EAAE,OAAO,CAAC;IAEnC;;;OAGG;IACH,IAAI,CAAC,EAAE,MAAM,CAAC;IAEd;;;;;OAKG;IACH,MAAM,CAAC,EAAE,MAAM,GAAG,MAAM,EAAE,CAAC;CAC5B;AAED;;;;;;;;;;GAUG;AACH,wBAAsB,mBAAmB,CACvC,QAAQ,EAAE,KAAK,EACf,OAAO,GAAE,0BAA+B,GACvC,OAAO,CAAC,SAAS,CAAC,CAoIpB"}

package/esm/io/itk_image_to_ngff_image.js

@@ -4,12 +4,12 @@
  * Convert ITK-Wasm Image to NgffImage
  */
 import * as zarr from "zarrita";
-import { defaultCodecs } from "../utils/codecs.js";
+// Import the get_strides function from zarrita utilities
+import { _zarrita_internal_get_strides as getStrides } from "zarrita";
 import { NgffImage } from "../types/ngff_image.js";
 import { itkLpsToAnatomicalOrientation } from "../types/rfc4.js";
+import { defaultCodecs } from "../utils/codecs.js";
 import { zarrSet } from "../utils/worker_pool.js";
-// Import the get_strides function from zarrita utilities
-import { _zarrita_internal_get_strides as getStrides } from "zarrita";
 /**
  * Convert an ITK-Wasm Image to an NgffImage, preserving spatial metadata.
  *
@@ -22,7 +22,7 @@ import { _zarrita_internal_get_strides as getStrides } from "zarrita";
  * @returns Promise resolving to NgffImage
  */
 export async function itkImageToNgffImage(itkImage, options = {}) {
-    const { addAnatomicalOrientation = true, path = "image", chunks = 256 } = options;
+    const { addAnatomicalOrientation = true, path = "image", chunks = 256, } = options;
     // Extract image properties from ITK-Wasm Image
     const _data = itkImage.data;
     // ITK stores size in physical space order [x, y, z], but the data buffer is in
@@ -30,13 +30,21 @@ export async function itkImageToNgffImage(itkImage, options = {}) {
     const shape = [...itkImage.size].reverse();
     const spacing = itkImage.spacing;
     const origin = itkImage.origin;
+    // Check if this is a vector image (multi-component)
+    const imageType = itkImage.imageType;
+    const isVector = imageType.components > 1;
+    // ITK-Wasm stores components separately from size (size is spatial-only).
+    // For vector images, append the component count to shape so that ndim and
+    // dims correctly include the "c" dimension — matching the Python
+    // implementation where image_dict["data"] already includes the component
+    // axis in its shape.
+    if (isVector) {
+        shape.push(imageType.components);
+    }
     const ndim = shape.length;
     // Determine dimension names based on shape and image type
     // This logic matches the Python implementation
     let dims;
-    // Check if this is a vector image (multi-component)
-    const imageType = itkImage.imageType;
-    const isVector = imageType.components > 1;
     if (ndim === 3 && isVector) {
         // 2D RGB/vector image: 2D spatial + components
         dims = ["y", "x", "c"];

package/esm/io/itk_image_to_ngff_image.js.map

@@ -1 +1 @@
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package/esm/mod.d.ts

@@ -16,7 +16,7 @@ export { isValidDimension, isValidUnit, validateMetadata, } from "./utils/valida
 export { createAxis, createDataset, createMetadata, createMultiscales, createNgffImage, } from "./utils/factory.js";
 export { getMethodMetadata } from "./utils/method_metadata.js";
 export { detectVersion, extractMethodMetadata, parseOmero, } from "./utils/parse_metadata.js";
-export { computeOmeroFromMultiscales, computeOmeroFromNgffImage, getDefaultColors, GLASBEY_COLORS, } from "./utils/compute_omero.js";
+export { computeOmeroFromMultiscales, computeOmeroFromNgffImage, getDefaultColors, GLASBEY_COLORS, terminateOmeroWorkerPool, } from "./utils/compute_omero.js";
 export type { ComputeOmeroFromMultiscalesOptions, ComputeOmeroOptions, } from "./utils/compute_omero.js";
 export { fromZarrAttrsV04, fromZarrAttrsV05 } from "./utils/from_zarr_attrs.js";
 export { terminateWorkerPool, zarrGet, zarrSet } from "./utils/worker_pool.js";

package/esm/mod.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"mod.d.ts","sourceRoot":"","sources":["../src/mod.ts"],"names":[],"mappings":"AAEA,cAAc,kBAAkB,CAAC;AACjC,cAAc,oBAAoB,CAAC;AACnC,cAAc,4BAA4B,CAAC;AAC3C,cAAc,0BAA0B,CAAC;AACzC,cAAc,uBAAuB,CAAC;AACtC,cAAc,wBAAwB,CAAC;AACvC,cAAc,iBAAiB,CAAC;AAChC,cAAc,gBAAgB,CAAC;AAC/B,cAAc,+BAA+B,CAAC;AAE9C,cAAc,oBAAoB,CAAC;AACnC,cAAc,sBAAsB,CAAC;AACrC,cAAc,4BAA4B,CAAC;AAC3C,cAAc,yBAAyB,CAAC;AACxC,cAAc,0BAA0B,CAAC;AAEzC,OAAO,EACL,gBAAgB,EAChB,WAAW,EACX,gBAAgB,GACjB,MAAM,uBAAuB,CAAC;AAC/B,OAAO,EACL,UAAU,EACV,aAAa,EACb,cAAc,EACd,iBAAiB,EACjB,eAAe,GAChB,MAAM,oBAAoB,CAAC;AAC5B,OAAO,EAAE,iBAAiB,EAAE,MAAM,4BAA4B,CAAC;AAC/D,OAAO,EACL,aAAa,EACb,qBAAqB,EACrB,UAAU,GACX,MAAM,2BAA2B,CAAC;AACnC,OAAO,EACL,2BAA2B,EAC3B,yBAAyB,EACzB,gBAAgB,EAChB,cAAc,EACd,wBAAwB,GACzB,MAAM,0BAA0B,CAAC;AAClC,YAAY,EACV,kCAAkC,EAClC,mBAAmB,GACpB,MAAM,0BAA0B,CAAC;AAClC,OAAO,EAAE,gBAAgB,EAAE,gBAAgB,EAAE,MAAM,4BAA4B,CAAC;AAChF,OAAO,EAAE,mBAAmB,EAAE,OAAO,EAAE,OAAO,EAAE,MAAM,wBAAwB,CAAC;AAE/E,cAAc,wBAAwB,CAAC;AACvC,cAAc,sBAAsB,CAAC;AACrC,cAAc,kCAAkC,CAAC;AACjD,YAAY,EAAE,WAAW,EAAE,MAAM,wBAAwB,CAAC;AAC1D,cAAc,iCAAiC,CAAC;AAChD,cAAc,iCAAiC,CAAC;AAChD,cAAc,aAAa,CAAC;AAG5B,OAAO,EACL,2BAA2B,EAC3B,cAAc,EACd,SAAS,EACT,gBAAgB,EAChB,iBAAiB,EACjB,gBAAgB,EAChB,cAAc,GACf,MAAM,kBAAkB,CAAC;AAC1B,YAAY,EAAE,uBAAuB,EAAE,MAAM,kBAAkB,CAAC"}

package/esm/mod.js

@@ -18,7 +18,7 @@ export { isValidDimension, isValidUnit, validateMetadata, } from "./utils/valida
 export { createAxis, createDataset, createMetadata, createMultiscales, createNgffImage, } from "./utils/factory.js";
 export { getMethodMetadata } from "./utils/method_metadata.js";
 export { detectVersion, extractMethodMetadata, parseOmero, } from "./utils/parse_metadata.js";
-export { computeOmeroFromMultiscales, computeOmeroFromNgffImage, getDefaultColors, GLASBEY_COLORS, } from "./utils/compute_omero.js";
+export { computeOmeroFromMultiscales, computeOmeroFromNgffImage, getDefaultColors, GLASBEY_COLORS, terminateOmeroWorkerPool, } from "./utils/compute_omero.js";
 export { fromZarrAttrsV04, fromZarrAttrsV05 } from "./utils/from_zarr_attrs.js";
 export { terminateWorkerPool, zarrGet, zarrSet } from "./utils/worker_pool.js";
 export * from "./io/from_ngff_zarr.js";

package/esm/mod.js.map

@@ -1 +1 @@
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package/esm/utils/compute_omero-shared.d.ts

@@ -63,6 +63,11 @@ export declare function finalizeStatistics(acc: ChannelStatisticsAccumulator, qu
     qLow: number;
     qHigh: number;
 };
+/**
+ * Merge two channel statistics accumulators.
+ * Used to combine partial results from parallel per-chunk workers.
+ */
+export declare function mergeAccumulators(a: ChannelStatisticsAccumulator, b: ChannelStatisticsAccumulator): ChannelStatisticsAccumulator;
 /**
  * Compute channel statistics from array data (non-streaming version).
  * For datasets larger than QUANTILE_SAMPLE_SIZE, uses reservoir sampling.
@@ -87,16 +92,18 @@ export interface ComputeOmeroOptions {
     colors?: string[] | undefined;
     /** Optional list of label strings for each channel. */
     labels?: string[] | undefined;
+    /**
+     * Optional decoded-chunk cache. When provided, decoded chunks are cached
+     * during omero computation so that subsequent zarrGet() calls with the
+     * same cache get cache hits (no re-decode). Any object with get(key)
+     * and set(key, value) works — a plain Map is the simplest option.
+     */
+    cache?: import("@fideus-labs/fizarrita").ChunkCache | undefined;
 }
 /**
  * Options for computing OMERO metadata from multiscales.
  */
 export interface ComputeOmeroFromMultiscalesOptions extends ComputeOmeroOptions {
-    /**
-     * If true (default), use the lowest resolution (smallest) image for faster computation.
-     * If false, use the highest resolution (largest) image for more accurate statistics.
-     */
-    useLowestResolution?: boolean;
 }
 /**
  * Build Omero metadata from channel accumulators.

package/esm/utils/compute_omero-shared.d.ts.map

@@ -1 +1 @@
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package/esm/utils/compute_omero-shared.js

@@ -378,6 +378,34 @@ export function finalizeStatistics(acc, quantiles) {
     const qHigh = computeQuantile(acc.sample, quantiles[1]);
     return { min: acc.min, max: acc.max, qLow, qHigh };
 }
+/**
+ * Merge two channel statistics accumulators.
+ * Used to combine partial results from parallel per-chunk workers.
+ */
+export function mergeAccumulators(a, b) {
+    const merged = {
+        min: Math.min(a.min, b.min),
+        max: Math.max(a.max, b.max),
+        count: a.count + b.count,
+        sample: [...a.sample, ...b.sample],
+    };
+    // Downsample if combined reservoir exceeds limit
+    if (merged.sample.length > QUANTILE_SAMPLE_SIZE) {
+        // Use reservoir sampling over the concatenated sample for unbiased downsampling
+        const k = QUANTILE_SAMPLE_SIZE;
+        const n = merged.sample.length;
+        // Treat the first k elements as the initial reservoir and
+        // stream the remaining elements, applying the reservoir update rule.
+        for (let i = k; i < n; i++) {
+            const j = Math.floor(Math.random() * (i + 1));
+            if (j < k) {
+                merged.sample[j] = merged.sample[i];
+            }
+        }
+        merged.sample.length = k;
+    }
+    return merged;
+}
 /**
  * Compute channel statistics from array data (non-streaming version).
  * For datasets larger than QUANTILE_SAMPLE_SIZE, uses reservoir sampling.

package/esm/utils/compute_omero-shared.js.map

@@ -1 +1 @@
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package/esm/utils/compute_omero.d.ts

@@ -1,61 +1,33 @@
-/**
- * Compute OMERO metadata from NgffImage data.
- *
- * This is the main-thread (Node.js/Deno) implementation.
- * For browser environments with WebWorker support, see compute_omero-browser.ts.
- */
 import type { NgffImage } from "../types/ngff_image.js";
 import type { Multiscales } from "../types/multiscales.js";
 import type { Omero } from "../types/zarr_metadata.js";
-export { computeChannelStatistics, type ComputeOmeroFromMultiscalesOptions, type ComputeOmeroOptions, extractChannel, getDefaultColors, GLASBEY_COLORS, QUANTILE_SAMPLE_SIZE, validateColor, validateQuantiles, } from "./compute_omero-shared.js";
 import { type ComputeOmeroFromMultiscalesOptions, type ComputeOmeroOptions } from "./compute_omero-shared.js";
+export { computeChannelStatistics, type ComputeOmeroFromMultiscalesOptions, type ComputeOmeroOptions, extractChannel, getDefaultColors, GLASBEY_COLORS, QUANTILE_SAMPLE_SIZE, validateColor, validateQuantiles, } from "./compute_omero-shared.js";
+/**
+ * Terminate the omero computation worker pool and release resources.
+ * Call this when you're done with OMERO computations to free memory.
+ */
+export declare function terminateOmeroWorkerPool(): void;
 /**
  * Compute OMERO metadata from an NgffImage.
  *
- * This function computes visualization parameters (OMERO metadata) from image data:
- * - min/max: The actual data range
- * - start/end: Display window based on quantiles (default 2% and 98%)
- *
- * For multi-channel images (with 'c' dimension), statistics are computed
- * separately for each channel, resulting in per-channel OMERO windows.
- *
- * Memory requirements: This function loads the entire image data into memory
- * for statistics computation. For large images, use the lowest resolution
- * image from a multiscales pyramid.
- *
- * Edge cases:
- * - If all values in a channel are NaN, the statistics will be NaN.
- * - If a channel has constant values, min/max/start/end will all be the same.
+ * Each zarr chunk is decoded and its per-channel statistics computed in
+ * parallel via a WorkerPool. Decoded chunks are optionally cached so that
+ * a subsequent zarrGet() with the same cache avoids redundant decompression.
  *
  * @param image - The NgffImage to compute metadata for
- * @param options - Optional configuration for quantiles, colors, and labels
- *   - quantiles: Tuple of (low, high) quantile values. Must be between 0 and 1,
- *                with low < high. Default is [0.02, 0.98] for 2% and 98% quantiles.
- *   - colors: List of hex color strings (without #) for each channel.
- *             Must be 6-digit hexadecimal strings (e.g., "FF0000" for red).
- *             If not provided, uses white for single channel or Glasbey
- *             progression for multi-channel.
- *   - labels: List of label strings for each channel.
- *             If not provided, uses empty strings.
+ * @param options - Optional configuration for quantiles, colors, labels, and cache
  * @returns Promise resolving to Omero metadata with computed window parameters
- * @throws {Error} If quantiles are invalid, colors are invalid format,
- *                 or not enough colors/labels provided.
- *
- * @example
- * ```ts
- * const omero = await computeOmeroFromNgffImage(image);
- * multiscales.metadata.omero = omero;
- * ```
  */
 export declare function computeOmeroFromNgffImage(image: NgffImage, options?: ComputeOmeroOptions): Promise<Omero>;
 /**
  * Compute OMERO metadata from a Multiscales object.
  *
  * This is a convenience function that computes OMERO metadata from the
- * highest or lowest resolution image in a multiscales pyramid.
+ * highest resolution image in a multiscales pyramid for accurate statistics.
  *
  * @param multiscales - The Multiscales object to compute metadata for
- * @param options - Optional configuration for quantiles, colors, labels, and resolution
+ * @param options - Optional configuration for quantiles, colors, and labels
  * @returns Promise resolving to Omero metadata with computed window parameters
  */
 export declare function computeOmeroFromMultiscales(multiscales: Multiscales, options?: ComputeOmeroFromMultiscalesOptions): Promise<Omero>;

package/esm/utils/compute_omero.d.ts.map

@@ -1 +1 @@
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