@equationalapplications/core-llm-wiki 7.11.0 → 7.11.2

package/dist/index.d.mts

@@ -1,5 +1,5 @@
-import { M as MemoryBundle, F as FormatContextOptions, G as GraphNeighborhood, a as MemoryDump, b as FormattedMemoryDump, R as ReadOptions, S as SQLiteAdapter, W as WikiOptions, c as WikiMemory } from './testing-C-WsBxLh.mjs';
-export { C as ChunkFailure, d as ClassifierAnswer, e as ClassifierQuestion, f as ClassifyRequest, g as ClassifyResponse, D as DegradedRecord, h as DraftPage, E as EmbedFactResult, i as EmbedFailureKind, j as EmbeddingMarkerKind, k as EntityMaintenanceReport, l as EntityStatus, m as ExtractedFact, n as ExtractedFactEdge, o as ExtractedFactWithOntology, p as ExtractedTask, q as GraphTraversalOptions, r as GroundingConfig, H as HEAL_BATCH_SIZE, s as HEAL_RECHECK_MS, t as HOOK_TIMEOUT_MARKER, u as HealResult, I as IngestDocumentResult, L as LLMProvider, v as LibrarianConfig, w as LibrarianGateConfig, x as MaintenanceJob, y as MaintenanceStopReason, O as ONTOLOGY_BACKFILL_BATCH_SIZE, z as ONTOLOGY_BACKFILL_MAX_PROMPT_CHARS, A as ONTOLOGY_BACKFILL_RECHECK_MS, B as OntologyBackfillResult, J as OntologyConfig, K as OntologyEdgeType, N as OntologyManifest, P as OntologyMode, Q as OntologyNodeType, T as OntologyPromptContext, U as OntologyUpdates, V as PendingMaintenance, X as PendingSourceStatus, Y as PromptOverrides, Z as PromptService, _ as PrunePartialFailureError, $ as ReembedResult, a0 as RunPendingMaintenanceOptions, a1 as RunPendingMaintenanceResult, a2 as SupersedeReplacement, a3 as VectorRanker, a4 as VectorRankerFallback, a5 as VectorRankerRankArgs, a6 as VectorRankerSemanticResult, a7 as WikiBusyError, a8 as WikiBusyOperation, a9 as WikiCheckpoint, aa as WikiConfig, ab as WikiDiagnostic, ac as WikiDiagnosticCode, ad as WikiDiagnosticDetail, ae as WikiDiagnosticOperation, af as WikiDiagnosticSeverity, ag as WikiDiagnosticTrigger, ah as WikiDraftNotFound, ai as WikiDuplicateHashError, aj as WikiEdge, ak as WikiEvent, al as WikiFact, am as WikiGraphNodeOwnershipConflict, an as WikiIngestEmptyError, ao as WikiInstructions, ap as WikiInvalidReadOptions, aq as WikiLintReport, ar as WikiMemoryTestAccess, as as WikiOutboxEvent, at as WikiParseError, au as WikiSourceRefHashCollision, av as WikiStrictOntologyViolation, aw as WikiSupersedeError, ax as WikiSupersedeReason, ay as WikiTask, az as WikiTransactionError, aA as validateManifest } from './testing-C-WsBxLh.mjs';
+import { M as MemoryBundle, F as FormatContextOptions, G as GraphNeighborhood, a as MemoryDump, b as FormattedMemoryDump, R as ReadOptions, S as SQLiteAdapter, W as WikiOptions, c as WikiMemory } from './testing-B0UtFCq1.mjs';
+export { C as ChunkFailure, d as ClassifierAnswer, e as ClassifierQuestion, f as ClassifyRequest, g as ClassifyResponse, D as DegradedRecord, h as DraftPage, E as EmbedFactResult, i as EmbedFailureKind, j as EmbeddingMarkerKind, k as EntityMaintenanceReport, l as EntityStatus, m as ExtractedFact, n as ExtractedFactEdge, o as ExtractedFactWithOntology, p as ExtractedTask, q as GraphTraversalOptions, r as GroundingConfig, H as HEAL_BATCH_SIZE, s as HEAL_RECHECK_MS, t as HOOK_TIMEOUT_MARKER, u as HealResult, I as IngestDocumentResult, L as LLMProvider, v as LibrarianConfig, w as LibrarianGateConfig, x as MaintenanceJob, y as MaintenanceStopReason, O as ONTOLOGY_BACKFILL_BATCH_SIZE, z as ONTOLOGY_BACKFILL_MAX_PROMPT_CHARS, A as ONTOLOGY_BACKFILL_RECHECK_MS, B as OntologyBackfillResult, J as OntologyConfig, K as OntologyEdgeType, N as OntologyManifest, P as OntologyMode, Q as OntologyNodeType, T as OntologyPromptContext, U as OntologyUpdates, V as PendingMaintenance, X as PendingSourceStatus, Y as PromptOverrides, Z as PromptService, _ as PrunePartialFailureError, $ as ReembedResult, a0 as RunPendingMaintenanceOptions, a1 as RunPendingMaintenanceResult, a2 as SupersedeReplacement, a3 as VectorRanker, a4 as VectorRankerFallback, a5 as VectorRankerRankArgs, a6 as VectorRankerSemanticResult, a7 as WikiBusyError, a8 as WikiBusyOperation, a9 as WikiCheckpoint, aa as WikiConfig, ab as WikiDiagnostic, ac as WikiDiagnosticCode, ad as WikiDiagnosticDetail, ae as WikiDiagnosticOperation, af as WikiDiagnosticSeverity, ag as WikiDiagnosticTrigger, ah as WikiDraftNotFound, ai as WikiDuplicateHashError, aj as WikiEdge, ak as WikiEvent, al as WikiFact, am as WikiGraphNodeOwnershipConflict, an as WikiIngestEmptyError, ao as WikiInstructions, ap as WikiInvalidReadOptions, aq as WikiLintReport, ar as WikiMemoryTestAccess, as as WikiOutboxEvent, at as WikiParseError, au as WikiSourceRefHashCollision, av as WikiStrictOntologyViolation, aw as WikiSupersedeError, ax as WikiSupersedeReason, ay as WikiTask, az as WikiTransactionError, aA as validateManifest } from './testing-B0UtFCq1.mjs';
 import { OkfFile } from '@equationalapplications/core-okf';
 
 /**

package/dist/index.d.ts

@@ -1,5 +1,5 @@
-import { M as MemoryBundle, F as FormatContextOptions, G as GraphNeighborhood, a as MemoryDump, b as FormattedMemoryDump, R as ReadOptions, S as SQLiteAdapter, W as WikiOptions, c as WikiMemory } from './testing-C-WsBxLh.js';
-export { C as ChunkFailure, d as ClassifierAnswer, e as ClassifierQuestion, f as ClassifyRequest, g as ClassifyResponse, D as DegradedRecord, h as DraftPage, E as EmbedFactResult, i as EmbedFailureKind, j as EmbeddingMarkerKind, k as EntityMaintenanceReport, l as EntityStatus, m as ExtractedFact, n as ExtractedFactEdge, o as ExtractedFactWithOntology, p as ExtractedTask, q as GraphTraversalOptions, r as GroundingConfig, H as HEAL_BATCH_SIZE, s as HEAL_RECHECK_MS, t as HOOK_TIMEOUT_MARKER, u as HealResult, I as IngestDocumentResult, L as LLMProvider, v as LibrarianConfig, w as LibrarianGateConfig, x as MaintenanceJob, y as MaintenanceStopReason, O as ONTOLOGY_BACKFILL_BATCH_SIZE, z as ONTOLOGY_BACKFILL_MAX_PROMPT_CHARS, A as ONTOLOGY_BACKFILL_RECHECK_MS, B as OntologyBackfillResult, J as OntologyConfig, K as OntologyEdgeType, N as OntologyManifest, P as OntologyMode, Q as OntologyNodeType, T as OntologyPromptContext, U as OntologyUpdates, V as PendingMaintenance, X as PendingSourceStatus, Y as PromptOverrides, Z as PromptService, _ as PrunePartialFailureError, $ as ReembedResult, a0 as RunPendingMaintenanceOptions, a1 as RunPendingMaintenanceResult, a2 as SupersedeReplacement, a3 as VectorRanker, a4 as VectorRankerFallback, a5 as VectorRankerRankArgs, a6 as VectorRankerSemanticResult, a7 as WikiBusyError, a8 as WikiBusyOperation, a9 as WikiCheckpoint, aa as WikiConfig, ab as WikiDiagnostic, ac as WikiDiagnosticCode, ad as WikiDiagnosticDetail, ae as WikiDiagnosticOperation, af as WikiDiagnosticSeverity, ag as WikiDiagnosticTrigger, ah as WikiDraftNotFound, ai as WikiDuplicateHashError, aj as WikiEdge, ak as WikiEvent, al as WikiFact, am as WikiGraphNodeOwnershipConflict, an as WikiIngestEmptyError, ao as WikiInstructions, ap as WikiInvalidReadOptions, aq as WikiLintReport, ar as WikiMemoryTestAccess, as as WikiOutboxEvent, at as WikiParseError, au as WikiSourceRefHashCollision, av as WikiStrictOntologyViolation, aw as WikiSupersedeError, ax as WikiSupersedeReason, ay as WikiTask, az as WikiTransactionError, aA as validateManifest } from './testing-C-WsBxLh.js';
+import { M as MemoryBundle, F as FormatContextOptions, G as GraphNeighborhood, a as MemoryDump, b as FormattedMemoryDump, R as ReadOptions, S as SQLiteAdapter, W as WikiOptions, c as WikiMemory } from './testing-B0UtFCq1.js';
+export { C as ChunkFailure, d as ClassifierAnswer, e as ClassifierQuestion, f as ClassifyRequest, g as ClassifyResponse, D as DegradedRecord, h as DraftPage, E as EmbedFactResult, i as EmbedFailureKind, j as EmbeddingMarkerKind, k as EntityMaintenanceReport, l as EntityStatus, m as ExtractedFact, n as ExtractedFactEdge, o as ExtractedFactWithOntology, p as ExtractedTask, q as GraphTraversalOptions, r as GroundingConfig, H as HEAL_BATCH_SIZE, s as HEAL_RECHECK_MS, t as HOOK_TIMEOUT_MARKER, u as HealResult, I as IngestDocumentResult, L as LLMProvider, v as LibrarianConfig, w as LibrarianGateConfig, x as MaintenanceJob, y as MaintenanceStopReason, O as ONTOLOGY_BACKFILL_BATCH_SIZE, z as ONTOLOGY_BACKFILL_MAX_PROMPT_CHARS, A as ONTOLOGY_BACKFILL_RECHECK_MS, B as OntologyBackfillResult, J as OntologyConfig, K as OntologyEdgeType, N as OntologyManifest, P as OntologyMode, Q as OntologyNodeType, T as OntologyPromptContext, U as OntologyUpdates, V as PendingMaintenance, X as PendingSourceStatus, Y as PromptOverrides, Z as PromptService, _ as PrunePartialFailureError, $ as ReembedResult, a0 as RunPendingMaintenanceOptions, a1 as RunPendingMaintenanceResult, a2 as SupersedeReplacement, a3 as VectorRanker, a4 as VectorRankerFallback, a5 as VectorRankerRankArgs, a6 as VectorRankerSemanticResult, a7 as WikiBusyError, a8 as WikiBusyOperation, a9 as WikiCheckpoint, aa as WikiConfig, ab as WikiDiagnostic, ac as WikiDiagnosticCode, ad as WikiDiagnosticDetail, ae as WikiDiagnosticOperation, af as WikiDiagnosticSeverity, ag as WikiDiagnosticTrigger, ah as WikiDraftNotFound, ai as WikiDuplicateHashError, aj as WikiEdge, ak as WikiEvent, al as WikiFact, am as WikiGraphNodeOwnershipConflict, an as WikiIngestEmptyError, ao as WikiInstructions, ap as WikiInvalidReadOptions, aq as WikiLintReport, ar as WikiMemoryTestAccess, as as WikiOutboxEvent, at as WikiParseError, au as WikiSourceRefHashCollision, av as WikiStrictOntologyViolation, aw as WikiSupersedeError, ax as WikiSupersedeReason, ay as WikiTask, az as WikiTransactionError, aA as validateManifest } from './testing-B0UtFCq1.js';
 import { OkfFile } from '@equationalapplications/core-okf';
 
 /**

package/dist/index.js

@@ -5480,12 +5480,24 @@ ${groundingEvidenceBlock(writer, cfg)}` : systemPrompt;
   hasOntologyPlaceholders(template) {
     return /\{\{\s*ontology(?:Manifest|ModeInstructions)\s*\}\}/.test(template);
   }
+  /** Removes ontology placeholders until none remain, so a nested form cannot reassemble one (closes CodeQL #11). */
+  stripOntologyPlaceholders(template) {
+    let out = template;
+    let prev;
+    do {
+      prev = out;
+      out = out.replace(/\{\{\s*ontology(?:Manifest|ModeInstructions)\s*\}\}/g, "");
+    } while (out !== prev);
+    return out;
+  }
   buildSystemPrompt(template, variables, ontologyContext) {
+    const hasOntologyPlaceholders = this.hasOntologyPlaceholders(template);
+    const effective = hasOntologyPlaceholders && ontologyContext == null ? this.stripOntologyPlaceholders(template) : template;
     const shouldHydrate = Object.keys(variables).some(
-      (key) => new RegExp(`\\{\\{\\s*${key}\\s*\\}\\}`).test(template)
-    ) || ontologyContext != null && this.hasOntologyPlaceholders(template);
-    const hydrated = shouldHydrate ? this.hydrate(template, { ...variables, ...ontologyContext ?? {} }) : template;
-    return this.hasOntologyPlaceholders(template) ? ontologyContext != null ? hydrated : hydrated.replace(/\{\{\s*ontology(?:Manifest|ModeInstructions)\s*\}\}/g, "") : this.appendOntology(hydrated, ontologyContext);
+      (key) => new RegExp(`\\{\\{\\s*${key}\\s*\\}\\}`).test(effective)
+    ) || ontologyContext != null && hasOntologyPlaceholders;
+    const hydrated = shouldHydrate ? this.hydrate(effective, { ...variables, ...ontologyContext ?? {} }) : effective;
+    return hasOntologyPlaceholders ? hydrated : this.appendOntology(hydrated, ontologyContext);
   }
   appendOntology(systemPrompt, ctx) {
     if (!ctx) return systemPrompt;
@@ -12095,7 +12107,7 @@ function parseStaleAfterRaw(raw) {
 function unescapeLogSummary(summary) {
   return summary.replace(/\\\]/g, "]").replace(/\\\[/g, "[").replace(/\\\\/g, "\\");
 }
-var LOG_LINE_PATTERN = /^\(([^)]+)\)\s*(?:\[((?:\\.|[^\]])*)\]\(([^)]+)\)|(.+))$/;
+var LOG_LINE_PATTERN = /^\(([^)]+)\)\s*(?:\[((?:\\.|[^\[\]\\])*)\]\(([^)]+)\)|(\S.*))$/;
 function parseLogEntryText(text) {
   const match = LOG_LINE_PATTERN.exec(text.trim());
   if (!match) return null;