@equationalapplications/core-llm-wiki 4.21.0 → 4.23.0

package/dist/index.mjs

@@ -1,5 +1,5 @@
-import { __privateAdd, MetadataRepository, EmbeddingService, SearchService, JobManager, PromptService, IngestionService, MaintenanceService, ImportExportService, RetrievalService, WriteService, __privateGet, __privateSet, normalizeSourceRef, normalizeSourceHash, entitySummaryMetaKey, generateId, BaseRepository, emptyManifest, resolveNodeType, validateInlineEdges, resolveEdgeDefinition, normalizeTitleKey, WikiTransactionError, extractSqliteCode } from './chunk-UYLYN5N4.mjs';
-export { HOOK_TIMEOUT_MARKER, ONTOLOGY_BACKFILL_BATCH_SIZE, ONTOLOGY_BACKFILL_MAX_PROMPT_CHARS, ONTOLOGY_BACKFILL_RECHECK_MS, ONTOLOGY_BACKFILL_SYSTEM_PROMPT, PromptService, PrunePartialFailureError, WikiBusyError, WikiTransactionError, configureRandomSource, parseEmbedding } from './chunk-UYLYN5N4.mjs';
+import { __privateAdd, MetadataRepository, EmbeddingService, SearchService, JobManager, PromptService, IngestionService, MaintenanceService, ImportExportService, RetrievalService, WriteService, __privateGet, __privateSet, normalizeSourceRef, normalizeSourceHash, entitySummaryMetaKey, generateId, BaseRepository, emptyManifest, resolveNodeType, validateInlineEdges, resolveEdgeDefinitions, normalizeTitleKey, WikiTransactionError, extractSqliteCode } from './chunk-MYZJLVX4.mjs';
+export { HOOK_TIMEOUT_MARKER, ONTOLOGY_BACKFILL_BATCH_SIZE, ONTOLOGY_BACKFILL_MAX_PROMPT_CHARS, ONTOLOGY_BACKFILL_RECHECK_MS, ONTOLOGY_BACKFILL_SYSTEM_PROMPT, PromptService, PrunePartialFailureError, WikiBusyError, WikiTransactionError, configureRandomSource, parseEmbedding, validateManifest } from './chunk-MYZJLVX4.mjs';
 import { appendRelatedSection, buildConceptDocument, buildLogMd, buildEntityIndexMd, buildRootIndexMd, isAllowedOkfPath, parseRootIndexMd, parseEntityIndexMd, parseConcept, splitRelatedSection, extractMarkdownLinks, parseLogMd, parseEventIdComment, appendEventIdComment } from '@equationalapplications/core-okf';
 
 // src/db/schema.ts
@@ -602,6 +602,45 @@ var EntryRepository = class extends BaseRepository {
     );
     return rows.map(mapRowToFact);
   }
+  /**
+   * Fetch live, mutable entries for an entity — everything heal is allowed to
+   * downgrade or delete. Heal previously loaded every row via
+   * findAllByEntityId and filtered in JS, which on a document-heavy corpus
+   * meant loading 2560 rows to keep 31.
+   */
+  async findHealCandidatesByEntityId(entityId, tx) {
+    const executor = this.getExecutor(tx);
+    const rows = await executor.getAllAsync(
+      `SELECT * FROM ${this.prefix}entries
+       WHERE entity_id = ? AND deleted_at IS NULL AND source_type != 'immutable_document'
+       ORDER BY updated_at DESC`,
+      [entityId]
+    );
+    return rows.map(mapRowToFact);
+  }
+  /**
+   * Resolve search hits to document anchors. The MiniSearch index holds every
+   * fact, not only immutable_document rows, so the source-type restriction has
+   * to be applied here, after retrieval.
+   */
+  async findAnchorRowsByIds(entityId, ids, tx) {
+    if (ids.length === 0) return [];
+    const executor = this.getExecutor(tx);
+    const rows = [];
+    for (let i = 0; i < ids.length; i += this.chunkSize) {
+      const chunk = ids.slice(i, i + this.chunkSize);
+      const placeholders = chunk.map(() => "?").join(", ");
+      const chunkRows = await executor.getAllAsync(
+        `SELECT id, title, source_ref FROM ${this.prefix}entries
+         WHERE entity_id = ? AND deleted_at IS NULL
+           AND source_type = 'immutable_document'
+           AND id IN (${placeholders})`,
+        [entityId, ...chunk]
+      );
+      rows.push(...chunkRows);
+    }
+    return rows;
+  }
   /**
    * Fetch recent non-deleted entries for an entity (limited), ordered by updated_at DESC.
    * Used by MaintenanceService.doRunLibrarian().
@@ -1643,7 +1682,8 @@ function mapRowToEdge(row) {
 var FACT_ONTOLOGY_FIELDS = `
 Each fact may optionally include:
 - "okf_type": string \u2014 must be one of the node_types in the manifest
-- "edges": [{ "edge_type": string, "target_title": string }] \u2014 target_title must match another fact's title in this response or existing memory`;
+- "edges": [{ "edge_type": string, "target_title": string }] \u2014 target_title must match another fact's title in this response or existing memory
+- An edge_type may appear in the manifest multiple times with different source_type/target_type; use the row whose types match your fact and target.`;
 var EMERGENT_EXTRA = `
 You may also return "ontology_updates" to propose new types:
 "ontology_updates": {
@@ -1728,12 +1768,15 @@ var OntologyService = class {
     if (!sourceType || edges.length === 0) return 0;
     let persisted = 0;
     for (const edge of edges) {
-      const def = resolveEdgeDefinition(edge.edge_type, manifest);
-      if (!def || def.source_type.toLowerCase() !== sourceType.toLowerCase()) continue;
+      const candidates = resolveEdgeDefinitions(edge.edge_type, manifest).filter((d) => d.source_type.toLowerCase() === sourceType.toLowerCase());
+      if (candidates.length === 0) continue;
       const targetKey = normalizeTitleKey(edge.target_title);
       const target = titleIndex.get(targetKey);
       if (!target) continue;
-      if (def.target_type.toLowerCase() !== (target.okf_type ?? "").toLowerCase()) continue;
+      const def = candidates.find(
+        (d) => d.target_type.toLowerCase() === (target.okf_type ?? "").toLowerCase()
+      );
+      if (!def) continue;
       const wikiEdge = {
         id: generateId(),
         entity_id: entityId,