@elyracode/coding-agent 0.9.26 → 0.9.28

package/CHANGELOG.md

@@ -1,5 +1,13 @@
 # Changelog
 
+## [0.9.28] - 2026-08-12
+
+## [0.9.27] - 2026-08-08
+
+### Added
+- `/ext` can now mark installed extensions for removal: space toggles `[x]` (install) on packages you don't have and `[-]` (remove) on ones you do, and enter applies both sets in one pass with per-package progress
+- `elyra doctor resources`: lists running Elyra instances with uptime, accumulated CPU time, and memory (including child language servers and headless browsers), and flags instances that look forgotten (high memory + running for over a day) with a ready-to-paste kill hint. Built in response to battery/memory reports — idle Elyra uses no CPU, but forgotten instances hold their memory
+
 ## [0.9.26] - 2026-08-07
 
 ### Added

package/dist/cli/args.d.ts.map

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package/dist/cli/args.js

@@ -200,6 +200,7 @@ ${chalk.bold("Commands:")}
   ${APP_NAME} doctor preflight          Validate configured defaults against the registry (offline) + freshness
   ${APP_NAME} doctor models             Live-verify configured providers against the model registry
   ${APP_NAME} doctor routing            Show local per-model outcome measurements (routing ledger)
+  ${APP_NAME} doctor resources          List running Elyra instances (age, CPU, memory) and flag forgotten ones
   ${APP_NAME} <command> --help          Show help for install/remove/uninstall/update/list
 
 ${chalk.bold("Options:")}

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* CLI argument parsing and help display\n */\n\nimport type { ThinkingLevel } from \"@elyracode/agent-core\";\nimport chalk from \"chalk\";\nimport { APP_NAME, CONFIG_DIR_NAME, ENV_AGENT_DIR, ENV_SESSION_DIR } from \"../config.js\";\nimport type { ExtensionFlag } from \"../core/extensions/types.js\";\n\nexport type Mode = \"text\" | \"json\" | \"rpc\";\n\nexport interface Args {\n\tprovider?: string;\n\tmodel?: string;\n\tapiKey?: string;\n\tsystemPrompt?: string;\n\tappendSystemPrompt?: string[];\n\tthinking?: ThinkingLevel;\n\tcontinue?: boolean;\n\tresume?: boolean;\n\thelp?: boolean;\n\tversion?: boolean;\n\tmode?: Mode;\n\tnoSession?: boolean;\n\tsession?: string;\n\tfork?: string;\n\tsessionDir?: string;\n\tmodels?: string[];\n\ttools?: string[];\n\tnoTools?: boolean;\n\tnoBuiltinTools?: boolean;\n\textensions?: string[];\n\tnoExtensions?: boolean;\n\tprint?: boolean;\n\texport?: string;\n\tnoSkills?: boolean;\n\tskills?: string[];\n\tpromptTemplates?: string[];\n\tnoPromptTemplates?: boolean;\n\tthemes?: string[];\n\tnoThemes?: boolean;\n\tnoContextFiles?: boolean;\n\tlistModels?: string | true;\n\toffline?: boolean;\n\tverbose?: boolean;\n\tmessages: string[];\n\tfileArgs: string[];\n\t/** Unknown flags (potentially extension flags) - map of flag name to value */\n\tunknownFlags: Map<string, boolean | string>;\n\tdiagnostics: Array<{ type: \"warning\" | \"error\"; message: string }>;\n}\n\nconst VALID_THINKING_LEVELS = [\"off\", \"minimal\", \"low\", \"medium\", \"high\", \"xhigh\"] as const;\n\nexport function isValidThinkingLevel(level: string): level is ThinkingLevel {\n\treturn VALID_THINKING_LEVELS.includes(level as ThinkingLevel);\n}\n\nexport function parseArgs(args: string[]): Args {\n\tconst result: Args = {\n\t\tmessages: [],\n\t\tfileArgs: [],\n\t\tunknownFlags: new Map(),\n\t\tdiagnostics: [],\n\t};\n\n\tfor (let i = 0; i < args.length; i++) {\n\t\tconst arg = args[i];\n\n\t\tif (arg === \"--help\" || arg === \"-h\") 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{\n\t\t\tresult.appendSystemPrompt = result.appendSystemPrompt ?? [];\n\t\t\tresult.appendSystemPrompt.push(args[++i]);\n\t\t} else if (arg === \"--no-session\") {\n\t\t\tresult.noSession = true;\n\t\t} else if (arg === \"--session\" && i + 1 < args.length) {\n\t\t\tresult.session = args[++i];\n\t\t} else if (arg === \"--fork\" && i + 1 < args.length) {\n\t\t\tresult.fork = args[++i];\n\t\t} else if (arg === \"--session-dir\" && i + 1 < args.length) {\n\t\t\tresult.sessionDir = args[++i];\n\t\t} else if (arg === \"--models\" && i + 1 < args.length) {\n\t\t\tresult.models = args[++i].split(\",\").map((s) => s.trim());\n\t\t} else if (arg === \"--no-tools\" || arg === \"-nt\") {\n\t\t\tresult.noTools = true;\n\t\t} else if (arg === \"--no-builtin-tools\" || arg === \"-nbt\") {\n\t\t\tresult.noBuiltinTools = true;\n\t\t} else if ((arg === \"--tools\" || arg === \"-t\") && i + 1 < args.length) {\n\t\t\tresult.tools = args[++i]\n\t\t\t\t.split(\",\")\n\t\t\t\t.map((s) => s.trim())\n\t\t\t\t.filter((name) => name.length > 0);\n\t\t} else if (arg === \"--thinking\" && i + 1 < args.length) {\n\t\t\tconst level = args[++i];\n\t\t\tif (isValidThinkingLevel(level)) {\n\t\t\t\tresult.thinking = level;\n\t\t\t} else {\n\t\t\t\tresult.diagnostics.push({\n\t\t\t\t\ttype: \"warning\",\n\t\t\t\t\tmessage: `Invalid thinking level \"${level}\". Valid values: ${VALID_THINKING_LEVELS.join(\", \")}`,\n\t\t\t\t});\n\t\t\t}\n\t\t} else if (arg === \"--print\" || arg === \"-p\") {\n\t\t\tresult.print = true;\n\t\t\tconst next = args[i + 1];\n\t\t\tif (next !== undefined && !next.startsWith(\"@\") && (!next.startsWith(\"-\") || next.startsWith(\"---\"))) {\n\t\t\t\tresult.messages.push(next);\n\t\t\t\ti++;\n\t\t\t}\n\t\t} else if (arg === \"--export\" && i + 1 < args.length) {\n\t\t\tresult.export = args[++i];\n\t\t} else if ((arg === \"--extension\" || arg === \"-e\") && i + 1 < args.length) {\n\t\t\tresult.extensions = result.extensions ?? [];\n\t\t\tresult.extensions.push(args[++i]);\n\t\t} else if (arg === \"--no-extensions\" || arg === \"-ne\") {\n\t\t\tresult.noExtensions = true;\n\t\t} else if (arg === \"--skill\" && i + 1 < args.length) {\n\t\t\tresult.skills = result.skills ?? [];\n\t\t\tresult.skills.push(args[++i]);\n\t\t} else if (arg === \"--prompt-template\" && i + 1 < args.length) {\n\t\t\tresult.promptTemplates = result.promptTemplates ?? [];\n\t\t\tresult.promptTemplates.push(args[++i]);\n\t\t} else if (arg === \"--theme\" && i + 1 < args.length) {\n\t\t\tresult.themes = result.themes ?? [];\n\t\t\tresult.themes.push(args[++i]);\n\t\t} else if (arg === \"--no-skills\" || arg === \"-ns\") {\n\t\t\tresult.noSkills = true;\n\t\t} else if (arg === \"--no-prompt-templates\" || arg === \"-np\") {\n\t\t\tresult.noPromptTemplates = true;\n\t\t} else if (arg === \"--no-themes\") {\n\t\t\tresult.noThemes = true;\n\t\t} else if (arg === \"--no-context-files\" || arg === \"-nc\") {\n\t\t\tresult.noContextFiles = true;\n\t\t} else if (arg === \"--list-models\") {\n\t\t\t// Check if next arg is a search pattern (not a flag or file arg)\n\t\t\tif (i + 1 < args.length && !args[i + 1].startsWith(\"-\") && !args[i + 1].startsWith(\"@\")) {\n\t\t\t\tresult.listModels = args[++i];\n\t\t\t} else {\n\t\t\t\tresult.listModels = true;\n\t\t\t}\n\t\t} else if (arg === \"--verbose\") {\n\t\t\tresult.verbose = true;\n\t\t} else if (arg === \"--offline\") {\n\t\t\tresult.offline = true;\n\t\t} else if (arg.startsWith(\"@\")) {\n\t\t\tresult.fileArgs.push(arg.slice(1)); // Remove @ prefix\n\t\t} else if (arg.startsWith(\"--\")) {\n\t\t\tconst eqIndex = arg.indexOf(\"=\");\n\t\t\tif (eqIndex !== -1) {\n\t\t\t\tresult.unknownFlags.set(arg.slice(2, eqIndex), arg.slice(eqIndex + 1));\n\t\t\t} else {\n\t\t\t\tconst flagName = arg.slice(2);\n\t\t\t\tconst next = args[i + 1];\n\t\t\t\tif (next !== undefined && !next.startsWith(\"-\") && !next.startsWith(\"@\")) {\n\t\t\t\t\tresult.unknownFlags.set(flagName, next);\n\t\t\t\t\ti++;\n\t\t\t\t} else {\n\t\t\t\t\tresult.unknownFlags.set(flagName, true);\n\t\t\t\t}\n\t\t\t}\n\t\t} else if (arg.startsWith(\"-\") && !arg.startsWith(\"--\")) {\n\t\t\tresult.diagnostics.push({ type: \"error\", message: `Unknown option: ${arg}` });\n\t\t} else if (!arg.startsWith(\"-\")) {\n\t\t\tresult.messages.push(arg);\n\t\t}\n\t}\n\n\treturn result;\n}\n\nexport function printHelp(extensionFlags?: ExtensionFlag[]): void {\n\tconst extensionFlagsText =\n\t\textensionFlags && extensionFlags.length > 0\n\t\t\t? `\\n${chalk.bold(\"Extension CLI Flags:\")}\\n${extensionFlags\n\t\t\t\t\t.map((flag) => {\n\t\t\t\t\t\tconst value = flag.type === \"string\" ? \" <value>\" : \"\";\n\t\t\t\t\t\tconst description = flag.description ?? `Registered by ${flag.extensionPath}`;\n\t\t\t\t\t\treturn `  --${flag.name}${value}`.padEnd(30) + description;\n\t\t\t\t\t})\n\t\t\t\t\t.join(\"\\n\")}\\n`\n\t\t\t: \"\";\n\tconsole.log(`${chalk.bold(APP_NAME)} - AI coding assistant with read, bash, edit, write tools\n\n${chalk.bold(\"Usage:\")}\n  ${APP_NAME} [options] [@files...] [messages...]\n\n${chalk.bold(\"Commands:\")}\n  ${APP_NAME} install <source> [-l]     Install extension source and add to settings\n  ${APP_NAME} remove <source> [-l]      Remove extension source from settings\n  ${APP_NAME} uninstall <source> [-l]   Alias for remove\n  ${APP_NAME} update [source|self|elyra]   Update elyra and installed extensions\n  ${APP_NAME} list                      List installed extensions from settings\n  ${APP_NAME} config                    Open TUI to enable/disable package resources\n  ${APP_NAME} doctor preflight          Validate configured defaults against the registry (offline) + freshness\n  ${APP_NAME} doctor models             Live-verify configured providers against the model registry\n  ${APP_NAME} doctor routing            Show local per-model outcome measurements (routing ledger)\n  ${APP_NAME} <command> --help          Show help for install/remove/uninstall/update/list\n\n${chalk.bold(\"Options:\")}\n  --provider <name>              Provider name (default: google)\n  --model <pattern>              Model pattern or ID (supports \"provider/id\" and optional \":<thinking>\")\n  --api-key <key>                API key (defaults to env vars)\n  --system-prompt <text>         System prompt (default: coding assistant prompt)\n  --append-system-prompt <text>  Append text or file contents to the system prompt (can be used multiple times)\n  --mode <mode>                  Output mode: text (default), json, or rpc\n  --print, -p                    Non-interactive mode: process prompt and exit\n  --continue, -c                 Continue previous session\n  --resume, -r                   Select a session to resume\n  --session <path|id>            Use specific session file or partial UUID\n  --fork <path|id>               Fork specific session file or partial UUID into a new session\n  --session-dir <dir>            Directory for session storage and lookup\n  --no-session                   Don't save session (ephemeral)\n  --models <patterns>            Comma-separated model patterns for Ctrl+P cycling\n                                 Supports globs (anthropic/*, *sonnet*) and fuzzy matching\n  --no-tools, -nt                Disable all tools by default (built-in and extension)\n  --no-builtin-tools, -nbt       Disable built-in tools by default but keep extension/custom tools enabled\n  --tools, -t <tools>            Comma-separated allowlist of tool names to enable\n                                 Applies to built-in, extension, and custom tools\n  --thinking <level>             Set thinking level: off, minimal, low, medium, high, xhigh\n  --extension, -e <path>         Load an extension file (can be used multiple times)\n  --no-extensions, -ne           Disable extension discovery (explicit -e paths still work)\n  --skill <path>                 Load a skill file or directory (can be used multiple times)\n  --no-skills, -ns               Disable skills discovery and loading\n  --prompt-template <path>       Load a prompt template file or directory (can be used multiple times)\n  --no-prompt-templates, -np     Disable prompt template discovery and loading\n  --theme <path>                 Load a theme file or directory (can be used multiple times)\n  --no-themes                    Disable theme discovery and loading\n  --no-context-files, -nc        Disable AGENTS.md and CLAUDE.md discovery and loading\n  --export <file>                Export session file to HTML and exit\n  --list-models [search]         List available models (with optional fuzzy search)\n  --verbose                      Force verbose startup (overrides quietStartup setting)\n  --offline                      Disable startup network operations (same as ELYRA_OFFLINE=1)\n  --help, -h                     Show this help\n  --version, -v                  Show version number\n\nExtensions can register additional flags (e.g., --plan from plan-mode extension).${extensionFlagsText}\n\n${chalk.bold(\"Examples:\")}\n  # Interactive mode\n  ${APP_NAME}\n\n  # Interactive mode with initial prompt\n  ${APP_NAME} \"List all .ts files in src/\"\n\n  # Include files in initial message\n  ${APP_NAME} @prompt.md @image.png \"What color is the sky?\"\n\n  # Non-interactive mode (process and exit)\n  ${APP_NAME} -p \"List all .ts files in src/\"\n\n  # Multiple messages (interactive)\n  ${APP_NAME} \"Read package.json\" \"What dependencies do we have?\"\n\n  # Continue previous session\n  ${APP_NAME} --continue \"What did we discuss?\"\n\n  # Use different model\n  ${APP_NAME} --provider openai --model gpt-4o-mini \"Help me refactor this code\"\n\n  # Use model with provider prefix (no --provider needed)\n  ${APP_NAME} --model openai/gpt-4o \"Help me refactor this code\"\n\n  # Use model with thinking level shorthand\n  ${APP_NAME} --model sonnet:high \"Solve this complex problem\"\n\n  # Limit model cycling to specific models\n  ${APP_NAME} --models claude-sonnet,claude-haiku,gpt-4o\n\n  # Limit to a specific provider with glob pattern\n  ${APP_NAME} --models \"github-copilot/*\"\n\n  # Cycle models with fixed thinking levels\n  ${APP_NAME} --models sonnet:high,haiku:low\n\n  # Start with a specific thinking level\n  ${APP_NAME} --thinking high \"Solve this complex problem\"\n\n  # Read-only mode (no file modifications possible)\n  ${APP_NAME} --tools read,grep,find,ls -p \"Review the code in src/\"\n\n  # Export a session file to HTML\n  ${APP_NAME} --export ~/${CONFIG_DIR_NAME}/agent/sessions/--path--/session.jsonl\n  ${APP_NAME} --export session.jsonl output.html\n\n${chalk.bold(\"Environment Variables:\")}\n  ANTHROPIC_API_KEY                - Anthropic Claude API key\n  ANTHROPIC_OAUTH_TOKEN            - Anthropic OAuth token (alternative to API key)\n  OPENAI_API_KEY                   - OpenAI GPT API key\n  AZURE_OPENAI_API_KEY             - Azure OpenAI API key\n  AZURE_OPENAI_BASE_URL            - Azure OpenAI/Cognitive Services base URL (e.g. https://{resource}.openai.azure.com)\n  AZURE_OPENAI_RESOURCE_NAME       - Azure OpenAI resource name (alternative to base URL)\n  AZURE_OPENAI_API_VERSION         - Azure OpenAI API version (default: v1)\n  AZURE_OPENAI_DEPLOYMENT_NAME_MAP - Azure OpenAI model=deployment map (comma-separated)\n  DEEPSEEK_API_KEY                 - DeepSeek API key\n  GEMINI_API_KEY                   - Google Gemini API key\n  GROQ_API_KEY                     - Groq API key\n  CEREBRAS_API_KEY                 - Cerebras API key\n  XAI_API_KEY                      - xAI Grok API key\n  FIREWORKS_API_KEY                - Fireworks API key\n  TOGETHER_API_KEY                 - Together AI API key\n  OPENROUTER_API_KEY               - OpenRouter API key\n  AI_GATEWAY_API_KEY               - Vercel AI Gateway API key\n  ZAI_API_KEY                      - ZAI API key\n  MISTRAL_API_KEY                  - Mistral API key\n  MINIMAX_API_KEY                  - MiniMax API key\n  MOONSHOT_API_KEY                 - Moonshot AI API key\n  OPENCODE_API_KEY                 - OpenCode Zen/OpenCode Go API key\n  KIMI_API_KEY                     - Kimi For Coding API key\n  CLOUDFLARE_API_KEY               - Cloudflare API token (Workers AI and AI Gateway)\n  CLOUDFLARE_ACCOUNT_ID            - Cloudflare account id (required for both)\n  CLOUDFLARE_GATEWAY_ID            - Cloudflare AI Gateway slug (required for AI Gateway)\n  XIAOMI_API_KEY                   - Xiaomi MiMo API key (api.xiaomimimo.com billing)\n  XIAOMI_TOKEN_PLAN_CN_API_KEY     - Xiaomi MiMo Token Plan API key (China region)\n  XIAOMI_TOKEN_PLAN_AMS_API_KEY    - Xiaomi MiMo Token Plan API key (Amsterdam region)\n  XIAOMI_TOKEN_PLAN_SGP_API_KEY    - Xiaomi MiMo Token Plan API key (Singapore region)\n  AWS_PROFILE                      - AWS profile for Amazon Bedrock\n  AWS_ACCESS_KEY_ID                - AWS access key for Amazon Bedrock\n  AWS_SECRET_ACCESS_KEY            - AWS secret key for Amazon Bedrock\n  AWS_BEARER_TOKEN_BEDROCK         - Bedrock API key (bearer token)\n  AWS_REGION                       - AWS region for Amazon Bedrock (e.g., us-east-1)\n  ${ENV_AGENT_DIR.padEnd(32)} - Config directory (default: ~/${CONFIG_DIR_NAME}/agent)\n  ${ENV_SESSION_DIR.padEnd(32)} - Session storage directory (overridden by --session-dir)\n  ELYRA_PACKAGE_DIR                - Override package directory (for Nix/Guix store paths)\n  ELYRA_OFFLINE                    - Disable startup network operations when set to 1/true/yes\n\n  ELYRA_SHARE_VIEWER_URL           - Base URL for /share command (default: https://elyracode.app/session/)\n\n${chalk.bold(\"Built-in Tool Names:\")}\n  read   - Read file contents\n  bash   - Execute bash commands\n  edit   - Edit files with find/replace\n  write  - Write files (creates/overwrites)\n  grep   - Search file contents (read-only, off by default)\n  find   - Find files by glob pattern (read-only, off by default)\n  ls     - List directory contents (read-only, off by default)\n`);\n}\n"]}
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{\n\t\t\tresult.help = true;\n\t\t} else if (arg === \"--version\" || arg === \"-v\") {\n\t\t\tresult.version = true;\n\t\t} else if (arg === \"--mode\" && i + 1 < args.length) {\n\t\t\tconst mode = args[++i];\n\t\t\tif (mode === \"text\" || mode === \"json\" || mode === \"rpc\") {\n\t\t\t\tresult.mode = mode;\n\t\t\t}\n\t\t} else if (arg === \"--continue\" || arg === \"-c\") {\n\t\t\tresult.continue = true;\n\t\t} else if (arg === \"--resume\" || arg === \"-r\") {\n\t\t\tresult.resume = true;\n\t\t} else if (arg === \"--provider\" && i + 1 < args.length) {\n\t\t\tresult.provider = args[++i];\n\t\t} else if (arg === \"--model\" && i + 1 < args.length) {\n\t\t\tresult.model = args[++i];\n\t\t} else if (arg === \"--api-key\" && i + 1 < args.length) {\n\t\t\tresult.apiKey = args[++i];\n\t\t} else if (arg === \"--system-prompt\" && i + 1 < args.length) {\n\t\t\tresult.systemPrompt = args[++i];\n\t\t} else if (arg === \"--append-system-prompt\" && i + 1 < args.length) {\n\t\t\tresult.appendSystemPrompt = result.appendSystemPrompt ?? [];\n\t\t\tresult.appendSystemPrompt.push(args[++i]);\n\t\t} else if (arg === \"--no-session\") {\n\t\t\tresult.noSession = true;\n\t\t} else if (arg === \"--session\" && i + 1 < args.length) {\n\t\t\tresult.session = args[++i];\n\t\t} else if (arg === \"--fork\" && i + 1 < args.length) {\n\t\t\tresult.fork = args[++i];\n\t\t} else if (arg === \"--session-dir\" && i + 1 < args.length) {\n\t\t\tresult.sessionDir = args[++i];\n\t\t} else if (arg === \"--models\" && i + 1 < args.length) {\n\t\t\tresult.models = args[++i].split(\",\").map((s) => s.trim());\n\t\t} else if (arg === \"--no-tools\" || arg === \"-nt\") {\n\t\t\tresult.noTools = true;\n\t\t} else if (arg === \"--no-builtin-tools\" || arg === \"-nbt\") {\n\t\t\tresult.noBuiltinTools = true;\n\t\t} else if ((arg === \"--tools\" || arg === \"-t\") && i + 1 < args.length) {\n\t\t\tresult.tools = args[++i]\n\t\t\t\t.split(\",\")\n\t\t\t\t.map((s) => s.trim())\n\t\t\t\t.filter((name) => name.length > 0);\n\t\t} else if (arg === \"--thinking\" && i + 1 < args.length) {\n\t\t\tconst level = args[++i];\n\t\t\tif (isValidThinkingLevel(level)) {\n\t\t\t\tresult.thinking = level;\n\t\t\t} else {\n\t\t\t\tresult.diagnostics.push({\n\t\t\t\t\ttype: \"warning\",\n\t\t\t\t\tmessage: `Invalid thinking level \"${level}\". Valid values: ${VALID_THINKING_LEVELS.join(\", \")}`,\n\t\t\t\t});\n\t\t\t}\n\t\t} else if (arg === \"--print\" || arg === \"-p\") {\n\t\t\tresult.print = true;\n\t\t\tconst next = args[i + 1];\n\t\t\tif (next !== undefined && !next.startsWith(\"@\") && (!next.startsWith(\"-\") || next.startsWith(\"---\"))) {\n\t\t\t\tresult.messages.push(next);\n\t\t\t\ti++;\n\t\t\t}\n\t\t} else if (arg === \"--export\" && i + 1 < args.length) {\n\t\t\tresult.export = args[++i];\n\t\t} else if ((arg === \"--extension\" || arg === \"-e\") && i + 1 < args.length) {\n\t\t\tresult.extensions = result.extensions ?? [];\n\t\t\tresult.extensions.push(args[++i]);\n\t\t} else if (arg === \"--no-extensions\" || arg === \"-ne\") {\n\t\t\tresult.noExtensions = true;\n\t\t} else if (arg === \"--skill\" && i + 1 < args.length) {\n\t\t\tresult.skills = result.skills ?? [];\n\t\t\tresult.skills.push(args[++i]);\n\t\t} else if (arg === \"--prompt-template\" && i + 1 < args.length) {\n\t\t\tresult.promptTemplates = result.promptTemplates ?? [];\n\t\t\tresult.promptTemplates.push(args[++i]);\n\t\t} else if (arg === \"--theme\" && i + 1 < args.length) {\n\t\t\tresult.themes = result.themes ?? [];\n\t\t\tresult.themes.push(args[++i]);\n\t\t} else if (arg === \"--no-skills\" || arg === \"-ns\") {\n\t\t\tresult.noSkills = true;\n\t\t} else if (arg === \"--no-prompt-templates\" || arg === \"-np\") {\n\t\t\tresult.noPromptTemplates = true;\n\t\t} else if (arg === \"--no-themes\") {\n\t\t\tresult.noThemes = true;\n\t\t} else if (arg === \"--no-context-files\" || arg === \"-nc\") {\n\t\t\tresult.noContextFiles = true;\n\t\t} else if (arg === \"--list-models\") {\n\t\t\t// Check if next arg is a search pattern (not a flag or file arg)\n\t\t\tif (i + 1 < args.length && !args[i + 1].startsWith(\"-\") && !args[i + 1].startsWith(\"@\")) {\n\t\t\t\tresult.listModels = args[++i];\n\t\t\t} else {\n\t\t\t\tresult.listModels = true;\n\t\t\t}\n\t\t} else if (arg === \"--verbose\") {\n\t\t\tresult.verbose = true;\n\t\t} else if (arg === \"--offline\") {\n\t\t\tresult.offline = true;\n\t\t} else if (arg.startsWith(\"@\")) {\n\t\t\tresult.fileArgs.push(arg.slice(1)); // Remove @ prefix\n\t\t} else if (arg.startsWith(\"--\")) {\n\t\t\tconst eqIndex = arg.indexOf(\"=\");\n\t\t\tif (eqIndex !== -1) {\n\t\t\t\tresult.unknownFlags.set(arg.slice(2, eqIndex), arg.slice(eqIndex + 1));\n\t\t\t} else {\n\t\t\t\tconst flagName = arg.slice(2);\n\t\t\t\tconst next = args[i + 1];\n\t\t\t\tif (next !== undefined && !next.startsWith(\"-\") && !next.startsWith(\"@\")) {\n\t\t\t\t\tresult.unknownFlags.set(flagName, next);\n\t\t\t\t\ti++;\n\t\t\t\t} else {\n\t\t\t\t\tresult.unknownFlags.set(flagName, true);\n\t\t\t\t}\n\t\t\t}\n\t\t} else if (arg.startsWith(\"-\") && !arg.startsWith(\"--\")) {\n\t\t\tresult.diagnostics.push({ type: \"error\", message: `Unknown option: ${arg}` });\n\t\t} else if (!arg.startsWith(\"-\")) {\n\t\t\tresult.messages.push(arg);\n\t\t}\n\t}\n\n\treturn result;\n}\n\nexport function printHelp(extensionFlags?: ExtensionFlag[]): void {\n\tconst extensionFlagsText =\n\t\textensionFlags && extensionFlags.length > 0\n\t\t\t? `\\n${chalk.bold(\"Extension CLI Flags:\")}\\n${extensionFlags\n\t\t\t\t\t.map((flag) => {\n\t\t\t\t\t\tconst value = flag.type === \"string\" ? \" <value>\" : \"\";\n\t\t\t\t\t\tconst description = flag.description ?? `Registered by ${flag.extensionPath}`;\n\t\t\t\t\t\treturn `  --${flag.name}${value}`.padEnd(30) + description;\n\t\t\t\t\t})\n\t\t\t\t\t.join(\"\\n\")}\\n`\n\t\t\t: \"\";\n\tconsole.log(`${chalk.bold(APP_NAME)} - AI coding assistant with read, bash, edit, write tools\n\n${chalk.bold(\"Usage:\")}\n  ${APP_NAME} [options] [@files...] [messages...]\n\n${chalk.bold(\"Commands:\")}\n  ${APP_NAME} install <source> [-l]     Install extension source and add to settings\n  ${APP_NAME} remove <source> [-l]      Remove extension source from settings\n  ${APP_NAME} uninstall <source> [-l]   Alias for remove\n  ${APP_NAME} update [source|self|elyra]   Update elyra and installed extensions\n  ${APP_NAME} list                      List installed extensions from settings\n  ${APP_NAME} config                    Open TUI to enable/disable package resources\n  ${APP_NAME} doctor preflight          Validate configured defaults against the registry (offline) + freshness\n  ${APP_NAME} doctor models             Live-verify configured providers against the model registry\n  ${APP_NAME} doctor routing            Show local per-model outcome measurements (routing ledger)\n  ${APP_NAME} doctor resources          List running Elyra instances (age, CPU, memory) and flag forgotten ones\n  ${APP_NAME} <command> --help          Show help for install/remove/uninstall/update/list\n\n${chalk.bold(\"Options:\")}\n  --provider <name>              Provider name (default: google)\n  --model <pattern>              Model pattern or ID (supports \"provider/id\" and optional \":<thinking>\")\n  --api-key <key>                API key (defaults to env vars)\n  --system-prompt <text>         System prompt (default: coding assistant prompt)\n  --append-system-prompt <text>  Append text or file contents to the system prompt (can be used multiple times)\n  --mode <mode>                  Output mode: text (default), json, or rpc\n  --print, -p                    Non-interactive mode: process prompt and exit\n  --continue, -c                 Continue previous session\n  --resume, -r                   Select a session to resume\n  --session <path|id>            Use specific session file or partial UUID\n  --fork <path|id>               Fork specific session file or partial UUID into a new session\n  --session-dir <dir>            Directory for session storage and lookup\n  --no-session                   Don't save session (ephemeral)\n  --models <patterns>            Comma-separated model patterns for Ctrl+P cycling\n                                 Supports globs (anthropic/*, *sonnet*) and fuzzy matching\n  --no-tools, -nt                Disable all tools by default (built-in and extension)\n  --no-builtin-tools, -nbt       Disable built-in tools by default but keep extension/custom tools enabled\n  --tools, -t <tools>            Comma-separated allowlist of tool names to enable\n                                 Applies to built-in, extension, and custom tools\n  --thinking <level>             Set thinking level: off, minimal, low, medium, high, xhigh\n  --extension, -e <path>         Load an extension file (can be used multiple times)\n  --no-extensions, -ne           Disable extension discovery (explicit -e paths still work)\n  --skill <path>                 Load a skill file or directory (can be used multiple times)\n  --no-skills, -ns               Disable skills discovery and loading\n  --prompt-template <path>       Load a prompt template file or directory (can be used multiple times)\n  --no-prompt-templates, -np     Disable prompt template discovery and loading\n  --theme <path>                 Load a theme file or directory (can be used multiple times)\n  --no-themes                    Disable theme discovery and loading\n  --no-context-files, -nc        Disable AGENTS.md and CLAUDE.md discovery and loading\n  --export <file>                Export session file to HTML and exit\n  --list-models [search]         List available models (with optional fuzzy search)\n  --verbose                      Force verbose startup (overrides quietStartup setting)\n  --offline                      Disable startup network operations (same as ELYRA_OFFLINE=1)\n  --help, -h                     Show this help\n  --version, -v                  Show version number\n\nExtensions can register additional flags (e.g., --plan from plan-mode extension).${extensionFlagsText}\n\n${chalk.bold(\"Examples:\")}\n  # Interactive mode\n  ${APP_NAME}\n\n  # Interactive mode with initial prompt\n  ${APP_NAME} \"List all .ts files in src/\"\n\n  # Include files in initial message\n  ${APP_NAME} @prompt.md @image.png \"What color is the sky?\"\n\n  # Non-interactive mode (process and exit)\n  ${APP_NAME} -p \"List all .ts files in src/\"\n\n  # Multiple messages (interactive)\n  ${APP_NAME} \"Read package.json\" \"What dependencies do we have?\"\n\n  # Continue previous session\n  ${APP_NAME} --continue \"What did we discuss?\"\n\n  # Use different model\n  ${APP_NAME} --provider openai --model gpt-4o-mini \"Help me refactor this code\"\n\n  # Use model with provider prefix (no --provider needed)\n  ${APP_NAME} --model openai/gpt-4o \"Help me refactor this code\"\n\n  # Use model with thinking level shorthand\n  ${APP_NAME} --model sonnet:high \"Solve this complex problem\"\n\n  # Limit model cycling to specific models\n  ${APP_NAME} --models claude-sonnet,claude-haiku,gpt-4o\n\n  # Limit to a specific provider with glob pattern\n  ${APP_NAME} --models \"github-copilot/*\"\n\n  # Cycle models with fixed thinking levels\n  ${APP_NAME} --models sonnet:high,haiku:low\n\n  # Start with a specific thinking level\n  ${APP_NAME} --thinking high \"Solve this complex problem\"\n\n  # Read-only mode (no file modifications possible)\n  ${APP_NAME} --tools read,grep,find,ls -p \"Review the code in src/\"\n\n  # Export a session file to HTML\n  ${APP_NAME} --export ~/${CONFIG_DIR_NAME}/agent/sessions/--path--/session.jsonl\n  ${APP_NAME} --export session.jsonl output.html\n\n${chalk.bold(\"Environment Variables:\")}\n  ANTHROPIC_API_KEY                - Anthropic Claude API key\n  ANTHROPIC_OAUTH_TOKEN            - Anthropic OAuth token (alternative to API key)\n  OPENAI_API_KEY                   - OpenAI GPT API key\n  AZURE_OPENAI_API_KEY             - Azure OpenAI API key\n  AZURE_OPENAI_BASE_URL            - Azure OpenAI/Cognitive Services base URL (e.g. https://{resource}.openai.azure.com)\n  AZURE_OPENAI_RESOURCE_NAME       - Azure OpenAI resource name (alternative to base URL)\n  AZURE_OPENAI_API_VERSION         - Azure OpenAI API version (default: v1)\n  AZURE_OPENAI_DEPLOYMENT_NAME_MAP - Azure OpenAI model=deployment map (comma-separated)\n  DEEPSEEK_API_KEY                 - DeepSeek API key\n  GEMINI_API_KEY                   - Google Gemini API key\n  GROQ_API_KEY                     - Groq API key\n  CEREBRAS_API_KEY                 - Cerebras API key\n  XAI_API_KEY                      - xAI Grok API key\n  FIREWORKS_API_KEY                - Fireworks API key\n  TOGETHER_API_KEY                 - Together AI API key\n  OPENROUTER_API_KEY               - OpenRouter API key\n  AI_GATEWAY_API_KEY               - Vercel AI Gateway API key\n  ZAI_API_KEY                      - ZAI API key\n  MISTRAL_API_KEY                  - Mistral API key\n  MINIMAX_API_KEY                  - MiniMax API key\n  MOONSHOT_API_KEY                 - Moonshot AI API key\n  OPENCODE_API_KEY                 - OpenCode Zen/OpenCode Go API key\n  KIMI_API_KEY                     - Kimi For Coding API key\n  CLOUDFLARE_API_KEY               - Cloudflare API token (Workers AI and AI Gateway)\n  CLOUDFLARE_ACCOUNT_ID            - Cloudflare account id (required for both)\n  CLOUDFLARE_GATEWAY_ID            - Cloudflare AI Gateway slug (required for AI Gateway)\n  XIAOMI_API_KEY                   - Xiaomi MiMo API key (api.xiaomimimo.com billing)\n  XIAOMI_TOKEN_PLAN_CN_API_KEY     - Xiaomi MiMo Token Plan API key (China region)\n  XIAOMI_TOKEN_PLAN_AMS_API_KEY    - Xiaomi MiMo Token Plan API key (Amsterdam region)\n  XIAOMI_TOKEN_PLAN_SGP_API_KEY    - Xiaomi MiMo Token Plan API key (Singapore region)\n  AWS_PROFILE                      - AWS profile for Amazon Bedrock\n  AWS_ACCESS_KEY_ID                - AWS access key for Amazon Bedrock\n  AWS_SECRET_ACCESS_KEY            - AWS secret key for Amazon Bedrock\n  AWS_BEARER_TOKEN_BEDROCK         - Bedrock API key (bearer token)\n  AWS_REGION                       - AWS region for Amazon Bedrock (e.g., us-east-1)\n  ${ENV_AGENT_DIR.padEnd(32)} - Config directory (default: ~/${CONFIG_DIR_NAME}/agent)\n  ${ENV_SESSION_DIR.padEnd(32)} - Session storage directory (overridden by --session-dir)\n  ELYRA_PACKAGE_DIR                - Override package directory (for Nix/Guix store paths)\n  ELYRA_OFFLINE                    - Disable startup network operations when set to 1/true/yes\n\n  ELYRA_SHARE_VIEWER_URL           - Base URL for /share command (default: https://elyracode.app/session/)\n\n${chalk.bold(\"Built-in Tool Names:\")}\n  read   - Read file contents\n  bash   - Execute bash commands\n  edit   - Edit files with find/replace\n  write  - Write files (creates/overwrites)\n  grep   - Search file contents (read-only, off by default)\n  find   - Find files by glob pattern (read-only, off by default)\n  ls     - List directory contents (read-only, off by default)\n`);\n}\n"]}

package/dist/cli/doctor-cli.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"doctor-cli.d.ts","sourceRoot":"","sources":["../../src/cli/doctor-cli.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AA2EH,wBAAsB,mBAAmB,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,OAAO,CAAC,CAqE1E"}
+{"version":3,"file":"doctor-cli.d.ts","sourceRoot":"","sources":["../../src/cli/doctor-cli.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAgFH,wBAAsB,mBAAmB,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,OAAO,CAAC,CAuF1E"}

package/dist/cli/doctor-cli.js

@@ -8,8 +8,10 @@ import { formatProbeReport, getEnvApiKey, getModels, getProviders, runModelProbe
 import chalk from "chalk";
 import { APP_NAME, getRoutingLedgerPath } from "../config.js";
 import { AuthStorage } from "../core/auth-storage.js";
+import { execCommand } from "../core/exec.js";
 import { checkDefaults } from "../core/model-freshness.js";
 import { defaultModelPerProvider } from "../core/model-resolver.js";
+import { findElyraInstances, formatResourceReport, parsePsOutput } from "../core/resource-inspector.js";
 import { formatStatsReport, loadStats } from "../core/routing-ledger.js";
 function printDoctorHelp() {
     console.log(`Usage: ${APP_NAME} doctor <command> [options]
@@ -21,6 +23,9 @@ Commands:
                       registry claims. Makes minimal real API calls.
   routing             Show local per-model outcome measurements (turn success,
                       edit failures, retries, failovers) from the routing ledger.
+  resources           List running Elyra instances with age, CPU time, and
+                      memory, including language servers and headless browsers,
+                      and flag forgotten instances.
 
 models options:
   --provider <name>   Only probe this provider
@@ -80,6 +85,23 @@ export async function handleDoctorCommand(args) {
         console.log(formatStatsReport(loadStats(getRoutingLedgerPath(), "main")));
         return true;
     }
+    if (sub === "resources") {
+        if (process.platform === "win32") {
+            console.log("doctor resources is not supported on Windows yet.");
+            return true;
+        }
+        const result = await execCommand("ps", ["axo", "pid=,ppid=,etime=,time=,rss=,command="], process.cwd(), {
+            timeout: 10_000,
+        });
+        if (result.code !== 0) {
+            console.error(chalk.red(`Could not inspect processes: ps exited with ${result.code}`));
+            process.exitCode = 1;
+            return true;
+        }
+        const instances = findElyraInstances(parsePsOutput(result.stdout), process.pid);
+        console.log(formatResourceReport(instances));
+        return true;
+    }
     if (sub !== "models") {
         console.error(chalk.red(`Unknown doctor command: ${sub}`));
         printDoctorHelp();

package/dist/cli/doctor-cli.js.map

@@ -1 +1 @@
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Uses the same probe\n * engine as the doctor extension's probe_models tool, with credentials\n * resolved from auth.json and environment variables.\n */\n\nimport {\n\tformatProbeReport,\n\tgetEnvApiKey,\n\tgetModels,\n\tgetProviders,\n\ttype KnownProvider,\n\trunModelProbes,\n} from \"@elyracode/ai\";\nimport chalk from \"chalk\";\nimport { APP_NAME, getRoutingLedgerPath } from \"../config.js\";\nimport { AuthStorage } from \"../core/auth-storage.js\";\nimport { checkDefaults } from \"../core/model-freshness.js\";\nimport { defaultModelPerProvider } from \"../core/model-resolver.js\";\nimport { formatStatsReport, loadStats } from \"../core/routing-ledger.js\";\n\nfunction printDoctorHelp(): void {\n\tconsole.log(`Usage: ${APP_NAME} doctor <command> [options]\n\nCommands:\n  preflight           Validate configured defaults against the model registry\n                      (offline) and report newer models where available.\n  models              Live-verify configured providers behave the way the\n                      registry claims. Makes minimal real API calls.\n  routing             Show local per-model outcome measurements (turn success,\n                      edit failures, retries, failovers) from the routing ledger.\n\nmodels options:\n  --provider <name>   Only probe this provider\n  --model <pattern>   Only probe models whose id contains this substring\n  --max <n>           Maximum total models to probe (default: 10)\n  --help, -h          Show this help`);\n}\n\n/** Build a provider -> registry model ids map from the model registry. */\nfunction buildProviderModelIds(): Record<string, string[]> {\n\tconst map: Record<string, string[]> = {};\n\tfor (const provider of getProviders()) {\n\t\tmap[provider] = getModels(provider as KnownProvider).map((m) => m.id);\n\t}\n\treturn map;\n}\n\n/**\n * `doctor preflight` — offline check that every default model still resolves\n * against the registry (catches defaults pointing at removed model ids before\n * they fail at runtime), plus freshness nudges for defaults with newer siblings.\n */\nfunction handlePreflight(): boolean {\n\tconst { problems, freshness } = checkDefaults(defaultModelPerProvider, buildProviderModelIds());\n\n\tif (problems.length === 0) {\n\t\tconsole.log(chalk.green(\"✓ All default models resolve against the registry.\"));\n\t} else {\n\t\tconsole.log(chalk.red(`✗ ${problems.length} default model reference(s) do not resolve:`));\n\t\tfor (const p of problems) {\n\t\t\tconsole.log(chalk.red(`  - ${p.message}`));\n\t\t}\n\t}\n\n\tif (freshness.length > 0) {\n\t\tconsole.log();\n\t\tconsole.log(chalk.yellow(\"Newer models available for configured defaults:\"));\n\t\tfor (const f of freshness) {\n\t\t\tconsole.log(chalk.yellow(`  - ${f.provider}: ${f.currentId} → ${f.newer.join(\", \")}`));\n\t\t}\n\t}\n\n\tif (problems.length > 0) {\n\t\tprocess.exitCode = 1;\n\t}\n\treturn true;\n}\n\nexport async function handleDoctorCommand(args: string[]): Promise<boolean> {\n\tif (args[0] !== \"doctor\") {\n\t\treturn false;\n\t}\n\n\tconst sub = args[1];\n\tif (sub === \"--help\" || sub === \"-h\" || sub === undefined) {\n\t\tprintDoctorHelp();\n\t\treturn true;\n\t}\n\n\tif (sub === \"preflight\") {\n\t\treturn handlePreflight();\n\t}\n\n\tif (sub === \"routing\") {\n\t\tconsole.log(formatStatsReport(loadStats(getRoutingLedgerPath(), \"main\")));\n\t\treturn true;\n\t}\n\n\tif (sub !== \"models\") {\n\t\tconsole.error(chalk.red(`Unknown doctor command: ${sub}`));\n\t\tprintDoctorHelp();\n\t\tprocess.exitCode = 1;\n\t\treturn true;\n\t}\n\n\tlet provider: string | undefined;\n\tlet modelPattern: string | undefined;\n\tlet maxModels: number | undefined;\n\n\tfor (let i = 2; i < args.length; i++) {\n\t\tconst arg = args[i];\n\t\tif (arg === \"--provider\" && i + 1 < args.length) {\n\t\t\tprovider = args[++i];\n\t\t} else if (arg === \"--model\" && i + 1 < args.length) {\n\t\t\tmodelPattern = args[++i];\n\t\t} else if (arg === \"--max\" && i + 1 < args.length) {\n\t\t\tmaxModels = Number.parseInt(args[++i], 10);\n\t\t} else if (arg === \"--help\" || arg === \"-h\") {\n\t\t\tprintDoctorHelp();\n\t\t\treturn true;\n\t\t} else {\n\t\t\tconsole.error(chalk.red(`Unknown option: ${arg}`));\n\t\t\tprocess.exitCode = 1;\n\t\t\treturn true;\n\t\t}\n\t}\n\n\tconst auth = AuthStorage.create();\n\tconsole.log(chalk.dim(\"Probing configured providers (minimal real API calls)...\"));\n\n\tconst report = await runModelProbes({\n\t\tprovider,\n\t\tmodelPattern,\n\t\tmaxModels,\n\t\t// Prefer stored credentials (auth.json), fall back to env vars.\n\t\tresolveApiKey: async (p) => (await auth.getApiKey(p)) ?? getEnvApiKey(p),\n\t});\n\n\tconsole.log();\n\tconsole.log(formatProbeReport(report));\n\n\tconst failed = report.probed.filter((r) => !r.ok).length;\n\tconst mismatches = report.probed.reduce((sum, r) => sum + r.mismatches.length, 0);\n\tif (failed > 0 || mismatches > 0) {\n\t\tprocess.exitCode = 1;\n\t}\n\treturn true;\n}\n"]}
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* `elyra doctor models` — live-verify configured providers against the\n * model registry without starting an agent session. Uses the same probe\n * engine as the doctor extension's probe_models tool, with credentials\n * resolved from auth.json and environment variables.\n */\n\nimport {\n\tformatProbeReport,\n\tgetEnvApiKey,\n\tgetModels,\n\tgetProviders,\n\ttype KnownProvider,\n\trunModelProbes,\n} from \"@elyracode/ai\";\nimport chalk from \"chalk\";\nimport { APP_NAME, getRoutingLedgerPath } from \"../config.js\";\nimport { AuthStorage } from \"../core/auth-storage.js\";\nimport { execCommand } from \"../core/exec.js\";\nimport { checkDefaults } from \"../core/model-freshness.js\";\nimport { defaultModelPerProvider } from \"../core/model-resolver.js\";\nimport { findElyraInstances, formatResourceReport, parsePsOutput } from \"../core/resource-inspector.js\";\nimport { formatStatsReport, loadStats } from \"../core/routing-ledger.js\";\n\nfunction printDoctorHelp(): void {\n\tconsole.log(`Usage: ${APP_NAME} doctor <command> [options]\n\nCommands:\n  preflight           Validate configured defaults against the model registry\n                      (offline) and report newer models where available.\n  models              Live-verify configured providers behave the way the\n                      registry claims. Makes minimal real API calls.\n  routing             Show local per-model outcome measurements (turn success,\n                      edit failures, retries, failovers) from the routing ledger.\n  resources           List running Elyra instances with age, CPU time, and\n                      memory, including language servers and headless browsers,\n                      and flag forgotten instances.\n\nmodels options:\n  --provider <name>   Only probe this provider\n  --model <pattern>   Only probe models whose id contains this substring\n  --max <n>           Maximum total models to probe (default: 10)\n  --help, -h          Show this help`);\n}\n\n/** Build a provider -> registry model ids map from the model registry. */\nfunction buildProviderModelIds(): Record<string, string[]> {\n\tconst map: Record<string, string[]> = {};\n\tfor (const provider of getProviders()) {\n\t\tmap[provider] = getModels(provider as KnownProvider).map((m) => m.id);\n\t}\n\treturn map;\n}\n\n/**\n * `doctor preflight` — offline check that every default model still resolves\n * against the registry (catches defaults pointing at removed model ids before\n * they fail at runtime), plus freshness nudges for defaults with newer siblings.\n */\nfunction handlePreflight(): boolean {\n\tconst { problems, freshness } = checkDefaults(defaultModelPerProvider, buildProviderModelIds());\n\n\tif (problems.length === 0) {\n\t\tconsole.log(chalk.green(\"✓ All default models resolve against the registry.\"));\n\t} else {\n\t\tconsole.log(chalk.red(`✗ ${problems.length} default model reference(s) do not resolve:`));\n\t\tfor (const p of problems) {\n\t\t\tconsole.log(chalk.red(`  - ${p.message}`));\n\t\t}\n\t}\n\n\tif (freshness.length > 0) {\n\t\tconsole.log();\n\t\tconsole.log(chalk.yellow(\"Newer models available for configured defaults:\"));\n\t\tfor (const f of freshness) {\n\t\t\tconsole.log(chalk.yellow(`  - ${f.provider}: ${f.currentId} → ${f.newer.join(\", \")}`));\n\t\t}\n\t}\n\n\tif (problems.length > 0) {\n\t\tprocess.exitCode = 1;\n\t}\n\treturn true;\n}\n\nexport async function handleDoctorCommand(args: string[]): Promise<boolean> {\n\tif (args[0] !== \"doctor\") {\n\t\treturn false;\n\t}\n\n\tconst sub = args[1];\n\tif (sub === \"--help\" || sub === \"-h\" || sub === undefined) {\n\t\tprintDoctorHelp();\n\t\treturn true;\n\t}\n\n\tif (sub === \"preflight\") {\n\t\treturn handlePreflight();\n\t}\n\n\tif (sub === \"routing\") {\n\t\tconsole.log(formatStatsReport(loadStats(getRoutingLedgerPath(), \"main\")));\n\t\treturn true;\n\t}\n\n\tif (sub === \"resources\") {\n\t\tif (process.platform === \"win32\") {\n\t\t\tconsole.log(\"doctor resources is not supported on Windows yet.\");\n\t\t\treturn true;\n\t\t}\n\t\tconst result = await execCommand(\"ps\", [\"axo\", \"pid=,ppid=,etime=,time=,rss=,command=\"], process.cwd(), {\n\t\t\ttimeout: 10_000,\n\t\t});\n\t\tif (result.code !== 0) {\n\t\t\tconsole.error(chalk.red(`Could not inspect processes: ps exited with ${result.code}`));\n\t\t\tprocess.exitCode = 1;\n\t\t\treturn true;\n\t\t}\n\t\tconst instances = findElyraInstances(parsePsOutput(result.stdout), process.pid);\n\t\tconsole.log(formatResourceReport(instances));\n\t\treturn true;\n\t}\n\n\tif (sub !== \"models\") {\n\t\tconsole.error(chalk.red(`Unknown doctor command: ${sub}`));\n\t\tprintDoctorHelp();\n\t\tprocess.exitCode = 1;\n\t\treturn true;\n\t}\n\n\tlet provider: string | undefined;\n\tlet modelPattern: string | undefined;\n\tlet maxModels: number | undefined;\n\n\tfor (let i = 2; i < args.length; i++) {\n\t\tconst arg = args[i];\n\t\tif (arg === \"--provider\" && i + 1 < args.length) {\n\t\t\tprovider = args[++i];\n\t\t} else if (arg === \"--model\" && i + 1 < args.length) {\n\t\t\tmodelPattern = args[++i];\n\t\t} else if (arg === \"--max\" && i + 1 < args.length) {\n\t\t\tmaxModels = Number.parseInt(args[++i], 10);\n\t\t} else if (arg === \"--help\" || arg === \"-h\") {\n\t\t\tprintDoctorHelp();\n\t\t\treturn true;\n\t\t} else {\n\t\t\tconsole.error(chalk.red(`Unknown option: ${arg}`));\n\t\t\tprocess.exitCode = 1;\n\t\t\treturn true;\n\t\t}\n\t}\n\n\tconst auth = AuthStorage.create();\n\tconsole.log(chalk.dim(\"Probing configured providers (minimal real API calls)...\"));\n\n\tconst report = await runModelProbes({\n\t\tprovider,\n\t\tmodelPattern,\n\t\tmaxModels,\n\t\t// Prefer stored credentials (auth.json), fall back to env vars.\n\t\tresolveApiKey: async (p) => (await auth.getApiKey(p)) ?? getEnvApiKey(p),\n\t});\n\n\tconsole.log();\n\tconsole.log(formatProbeReport(report));\n\n\tconst failed = report.probed.filter((r) => !r.ok).length;\n\tconst mismatches = report.probed.reduce((sum, r) => sum + r.mismatches.length, 0);\n\tif (failed > 0 || mismatches > 0) {\n\t\tprocess.exitCode = 1;\n\t}\n\treturn true;\n}\n"]}

package/dist/core/resource-inspector.d.ts

@@ -0,0 +1,49 @@
+/**
+ * Resource inspector: find running Elyra instances and their child
+ * processes (language servers, headless browsers), with age, CPU time,
+ * and memory - so "Elyra uses a lot of memory" reports turn into data.
+ *
+ * All parsing is pure and unit-tested; the only side effect (running `ps`)
+ * lives in the CLI layer.
+ */
+export interface ProcessRecord {
+    pid: number;
+    ppid: number;
+    /** Elapsed wall-clock seconds since the process started. */
+    elapsedSeconds: number;
+    /** Accumulated CPU seconds. */
+    cpuSeconds: number;
+    /** Resident set size in KB. */
+    rssKb: number;
+    command: string;
+}
+export interface ElyraInstance {
+    process: ProcessRecord;
+    children: ProcessRecord[];
+    /** RSS of the instance plus all children, in KB. */
+    totalRssKb: number;
+    warnings: string[];
+}
+/** Parse `ps` etime format: [[dd-]hh:]mm:ss */
+export declare function parseElapsed(value: string): number;
+/** Parse `ps` cputime format: [[dd-]hh:]mm:ss(.fraction) */
+export declare function parseCpuTime(value: string): number;
+/**
+ * Parse `ps axo pid=,ppid=,etime=,time=,rss=,command=` output.
+ * The first five fields are fixed-position tokens; the rest is the command.
+ */
+export declare function parsePsOutput(output: string): ProcessRecord[];
+/**
+ * Does this command line look like a running Elyra agent?
+ * Matches the global bin (`elyra`), dist (`@elyracode/coding-agent/dist/cli.js`),
+ * and from-source (`coding-agent/src/cli.ts`) forms, while excluding other
+ * Elyra-branded apps (elyra-conductor, Elyra.app) and this very inspector.
+ */
+export declare function isElyraCommand(command: string): boolean;
+/** Human label for a known child process, or undefined for uninteresting ones. */
+export declare function classifyChild(command: string): string | undefined;
+export declare function findElyraInstances(records: ProcessRecord[], selfPid: number): ElyraInstance[];
+export declare function formatMb(kb: number): string;
+export declare function formatDuration(seconds: number): string;
+export declare function formatResourceReport(instances: ElyraInstance[]): string;
+//# sourceMappingURL=resource-inspector.d.ts.map

package/dist/core/resource-inspector.d.ts.map

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package/dist/core/resource-inspector.js

@@ -0,0 +1,175 @@
+/**
+ * Resource inspector: find running Elyra instances and their child
+ * processes (language servers, headless browsers), with age, CPU time,
+ * and memory - so "Elyra uses a lot of memory" reports turn into data.
+ *
+ * All parsing is pure and unit-tested; the only side effect (running `ps`)
+ * lives in the CLI layer.
+ */
+// ── Thresholds ──────────────────────────────────────────────────────────────
+const HIGH_MEMORY_KB = 500 * 1024;
+const LONG_RUNNING_SECONDS = 24 * 60 * 60;
+// ── Parsing ─────────────────────────────────────────────────────────────────
+/** Parse `ps` etime format: [[dd-]hh:]mm:ss */
+export function parseElapsed(value) {
+    const match = /^(?:(\d+)-)?(?:(\d+):)?(\d+):(\d+)$/.exec(value.trim());
+    if (!match)
+        return 0;
+    const [, days, hours, minutes, seconds] = match;
+    return Number(days ?? 0) * 86_400 + Number(hours ?? 0) * 3_600 + Number(minutes ?? 0) * 60 + Number(seconds ?? 0);
+}
+/** Parse `ps` cputime format: [[dd-]hh:]mm:ss(.fraction) */
+export function parseCpuTime(value) {
+    const match = /^(?:(\d+)-)?(?:(\d+):)?(\d+):(\d+(?:\.\d+)?)$/.exec(value.trim());
+    if (!match)
+        return 0;
+    const [, days, hours, minutes, seconds] = match;
+    return Number(days ?? 0) * 86_400 + Number(hours ?? 0) * 3_600 + Number(minutes ?? 0) * 60 + Number(seconds ?? 0);
+}
+/**
+ * Parse `ps axo pid=,ppid=,etime=,time=,rss=,command=` output.
+ * The first five fields are fixed-position tokens; the rest is the command.
+ */
+export function parsePsOutput(output) {
+    const records = [];
+    for (const line of output.split("\n")) {
+        const trimmed = line.trim();
+        if (!trimmed)
+            continue;
+        const match = /^(\d+)\s+(\d+)\s+(\S+)\s+(\S+)\s+(\d+)\s+(.*)$/.exec(trimmed);
+        if (!match)
+            continue;
+        records.push({
+            pid: Number(match[1]),
+            ppid: Number(match[2]),
+            elapsedSeconds: parseElapsed(match[3]),
+            cpuSeconds: parseCpuTime(match[4]),
+            rssKb: Number(match[5]),
+            command: match[6],
+        });
+    }
+    return records;
+}
+// ── Matching ────────────────────────────────────────────────────────────────
+/**
+ * Does this command line look like a running Elyra agent?
+ * Matches the global bin (`elyra`), dist (`@elyracode/coding-agent/dist/cli.js`),
+ * and from-source (`coding-agent/src/cli.ts`) forms, while excluding other
+ * Elyra-branded apps (elyra-conductor, Elyra.app) and this very inspector.
+ */
+export function isElyraCommand(command) {
+    if (/@elyracode\/coding-agent\/dist\/cli\.js/.test(command))
+        return true;
+    if (/coding-agent\/src\/cli\.ts/.test(command))
+        return true;
+    // Bare bin invocation: "elyra", "elyra --continue", ".../bin/elyra ..."
+    if (/(^|\/)elyra(\s|$)/.test(command))
+        return true;
+    return false;
+}
+/** Human label for a known child process, or undefined for uninteresting ones. */
+export function classifyChild(command) {
+    if (/typescript-language-server|tsserver/.test(command))
+        return "TypeScript language server";
+    if (/intelephense/.test(command))
+        return "PHP language server (Intelephense)";
+    if (/phpactor/.test(command))
+        return "PHP language server (phpactor)";
+    if (/rust-analyzer/.test(command))
+        return "Rust language server (rust-analyzer)";
+    if (/headless_shell|chromium|chrome/i.test(command))
+        return "Headless browser";
+    if (/\belyra\b.*install/.test(command))
+        return "Package install";
+    return undefined;
+}
+// ── Analysis ────────────────────────────────────────────────────────────────
+export function findElyraInstances(records, selfPid) {
+    const byPid = new Map(records.map((r) => [r.pid, r]));
+    // Exclude the inspector's own instance subtree: walk self's ancestors and
+    // find the topmost elyra-matching one (the bin wrapper, or the hosting
+    // session when run via the bash tool inside Elyra), then drop that whole
+    // subtree. The report deliberately shows *other* instances only.
+    let excludedRoot;
+    const seen = new Set();
+    let cursor = byPid.get(selfPid);
+    while (cursor && !seen.has(cursor.pid)) {
+        seen.add(cursor.pid);
+        if (isElyraCommand(cursor.command))
+            excludedRoot = cursor.pid;
+        cursor = byPid.get(cursor.ppid);
+    }
+    const excluded = new Set([selfPid]);
+    if (excludedRoot !== undefined) {
+        excluded.add(excludedRoot);
+        for (const descendant of collectDescendants(records, excludedRoot))
+            excluded.add(descendant.pid);
+    }
+    const matching = records.filter((r) => isElyraCommand(r.command));
+    const matchingPids = new Set(matching.map((r) => r.pid));
+    // Collapse parent/child pairs where both match (bin wrapper -> node):
+    // keep the topmost of each matching chain.
+    const roots = matching.filter((r) => !matchingPids.has(r.ppid) && !excluded.has(r.pid));
+    return roots.map((root) => {
+        const children = collectDescendants(records, root.pid);
+        const totalRssKb = root.rssKb + children.reduce((sum, c) => sum + c.rssKb, 0);
+        const warnings = [];
+        if (totalRssKb > HIGH_MEMORY_KB)
+            warnings.push("high memory");
+        if (root.elapsedSeconds > LONG_RUNNING_SECONDS)
+            warnings.push("running for more than a day");
+        if (warnings.length === 2)
+            warnings.push("likely forgotten - consider closing it");
+        return { process: root, children, totalRssKb, warnings };
+    });
+}
+function collectDescendants(records, pid) {
+    const direct = records.filter((r) => r.ppid === pid);
+    return [...direct, ...direct.flatMap((child) => collectDescendants(records, child.pid))];
+}
+// ── Formatting ──────────────────────────────────────────────────────────────
+export function formatMb(kb) {
+    return `${Math.round(kb / 1024)} MB`;
+}
+export function formatDuration(seconds) {
+    if (seconds >= 86_400)
+        return `${Math.floor(seconds / 86_400)}d ${Math.floor((seconds % 86_400) / 3_600)}h`;
+    if (seconds >= 3_600)
+        return `${Math.floor(seconds / 3_600)}h ${Math.floor((seconds % 3_600) / 60)}m`;
+    if (seconds >= 60)
+        return `${Math.floor(seconds / 60)}m ${Math.floor(seconds % 60)}s`;
+    return `${Math.floor(seconds)}s`;
+}
+export function formatResourceReport(instances) {
+    if (instances.length === 0) {
+        return "No other Elyra instances are running.";
+    }
+    const lines = [];
+    const totalKb = instances.reduce((sum, i) => sum + i.totalRssKb, 0);
+    lines.push(`${instances.length} Elyra instance${instances.length === 1 ? "" : "s"} running, ${formatMb(totalKb)} total memory:`);
+    lines.push("");
+    const sorted = [...instances].sort((a, b) => b.totalRssKb - a.totalRssKb);
+    for (const instance of sorted) {
+        const p = instance.process;
+        const flags = instance.warnings.length > 0 ? `  [${instance.warnings.join(", ")}]` : "";
+        lines.push(`- PID ${p.pid}: up ${formatDuration(p.elapsedSeconds)}, ` +
+            `${formatDuration(p.cpuSeconds)} CPU time, ${formatMb(instance.totalRssKb)}${flags}`);
+        for (const child of instance.children) {
+            const label = classifyChild(child.command);
+            if (!label)
+                continue;
+            lines.push(`    child: ${label} (PID ${child.pid}, ${formatMb(child.rssKb)})`);
+        }
+    }
+    const forgotten = sorted.filter((i) => i.warnings.length >= 2);
+    if (forgotten.length > 0) {
+        lines.push("");
+        lines.push(`${forgotten.length} instance${forgotten.length === 1 ? " looks" : "s look"} forgotten. ` +
+            `Close the terminal running ${forgotten.length === 1 ? "it" : "them"}, or: kill ${forgotten.map((i) => i.process.pid).join(" ")}`);
+    }
+    lines.push("");
+    lines.push("Idle Elyra uses no CPU; memory is held until an instance exits. Language servers");
+    lines.push("and headless browsers listed above belong to their instance and exit with it.");
+    return lines.join("\n");
+}
+//# sourceMappingURL=resource-inspector.js.map

package/dist/core/resource-inspector.js.map

@@ -0,0 +1 @@
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* Resource inspector: find running Elyra instances and their child\n * processes (language servers, headless browsers), with age, CPU time,\n * and memory - so \"Elyra uses a lot of memory\" reports turn into data.\n *\n * All parsing is pure and unit-tested; the only side effect (running `ps`)\n * lives in the CLI layer.\n */\n\n// ── Types ───────────────────────────────────────────────────────────────────\n\nexport interface ProcessRecord {\n\tpid: number;\n\tppid: number;\n\t/** Elapsed wall-clock seconds since the process started. */\n\telapsedSeconds: number;\n\t/** Accumulated CPU seconds. */\n\tcpuSeconds: number;\n\t/** Resident set size in KB. */\n\trssKb: number;\n\tcommand: string;\n}\n\nexport interface ElyraInstance {\n\tprocess: ProcessRecord;\n\tchildren: ProcessRecord[];\n\t/** RSS of the instance plus all children, in KB. */\n\ttotalRssKb: number;\n\twarnings: string[];\n}\n\n// ── Thresholds ──────────────────────────────────────────────────────────────\n\nconst HIGH_MEMORY_KB = 500 * 1024;\nconst LONG_RUNNING_SECONDS = 24 * 60 * 60;\n\n// ── Parsing ─────────────────────────────────────────────────────────────────\n\n/** Parse `ps` etime format: [[dd-]hh:]mm:ss */\nexport function parseElapsed(value: string): number {\n\tconst match = /^(?:(\\d+)-)?(?:(\\d+):)?(\\d+):(\\d+)$/.exec(value.trim());\n\tif (!match) return 0;\n\tconst [, days, hours, minutes, seconds] = match;\n\treturn Number(days ?? 0) * 86_400 + Number(hours ?? 0) * 3_600 + Number(minutes ?? 0) * 60 + Number(seconds ?? 0);\n}\n\n/** Parse `ps` cputime format: [[dd-]hh:]mm:ss(.fraction) */\nexport function parseCpuTime(value: string): number {\n\tconst match = /^(?:(\\d+)-)?(?:(\\d+):)?(\\d+):(\\d+(?:\\.\\d+)?)$/.exec(value.trim());\n\tif (!match) return 0;\n\tconst [, days, hours, minutes, seconds] = match;\n\treturn Number(days ?? 0) * 86_400 + Number(hours ?? 0) * 3_600 + Number(minutes ?? 0) * 60 + Number(seconds ?? 0);\n}\n\n/**\n * Parse `ps axo 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(`coding-agent/src/cli.ts`) forms, while excluding other\n * Elyra-branded apps (elyra-conductor, Elyra.app) and this very inspector.\n */\nexport function isElyraCommand(command: string): boolean {\n\tif (/@elyracode\\/coding-agent\\/dist\\/cli\\.js/.test(command)) return true;\n\tif (/coding-agent\\/src\\/cli\\.ts/.test(command)) return true;\n\t// Bare bin invocation: \"elyra\", \"elyra --continue\", \".../bin/elyra ...\"\n\tif (/(^|\\/)elyra(\\s|$)/.test(command)) return true;\n\treturn false;\n}\n\n/** Human label for a known child process, or undefined for uninteresting ones. */\nexport function classifyChild(command: string): string | undefined {\n\tif (/typescript-language-server|tsserver/.test(command)) return \"TypeScript language server\";\n\tif (/intelephense/.test(command)) return \"PHP language server (Intelephense)\";\n\tif (/phpactor/.test(command)) return \"PHP language server (phpactor)\";\n\tif (/rust-analyzer/.test(command)) return \"Rust language server (rust-analyzer)\";\n\tif (/headless_shell|chromium|chrome/i.test(command)) return \"Headless browser\";\n\tif (/\\belyra\\b.*install/.test(command)) return \"Package install\";\n\treturn undefined;\n}\n\n// ── Analysis ────────────────────────────────────────────────────────────────\n\nexport function findElyraInstances(records: ProcessRecord[], selfPid: number): ElyraInstance[] {\n\tconst byPid = new Map(records.map((r) => [r.pid, r]));\n\n\t// Exclude the inspector's own instance subtree: walk self's ancestors and\n\t// find the topmost elyra-matching one (the bin wrapper, or the hosting\n\t// session when run via the bash tool inside Elyra), then drop that whole\n\t// subtree. The report deliberately shows *other* instances only.\n\tlet excludedRoot: number | undefined;\n\tconst seen = new Set<number>();\n\tlet cursor = byPid.get(selfPid);\n\twhile (cursor && !seen.has(cursor.pid)) {\n\t\tseen.add(cursor.pid);\n\t\tif (isElyraCommand(cursor.command)) excludedRoot = cursor.pid;\n\t\tcursor = byPid.get(cursor.ppid);\n\t}\n\tconst excluded = new Set<number>([selfPid]);\n\tif (excludedRoot !== undefined) {\n\t\texcluded.add(excludedRoot);\n\t\tfor (const descendant of collectDescendants(records, excludedRoot)) excluded.add(descendant.pid);\n\t}\n\n\tconst matching = records.filter((r) => isElyraCommand(r.command));\n\tconst matchingPids = new Set(matching.map((r) => r.pid));\n\n\t// Collapse parent/child pairs where both match (bin wrapper -> node):\n\t// keep the topmost of each matching chain.\n\tconst roots = matching.filter((r) => !matchingPids.has(r.ppid) && !excluded.has(r.pid));\n\n\treturn roots.map((root) => {\n\t\tconst children = collectDescendants(records, root.pid);\n\t\tconst totalRssKb = root.rssKb + children.reduce((sum, c) => sum + c.rssKb, 0);\n\t\tconst warnings: string[] = [];\n\t\tif (totalRssKb > HIGH_MEMORY_KB) warnings.push(\"high memory\");\n\t\tif (root.elapsedSeconds > LONG_RUNNING_SECONDS) warnings.push(\"running for more than a day\");\n\t\tif (warnings.length === 2) warnings.push(\"likely forgotten - consider closing it\");\n\t\treturn { process: root, children, totalRssKb, warnings };\n\t});\n}\n\nfunction collectDescendants(records: ProcessRecord[], pid: number): ProcessRecord[] {\n\tconst direct = records.filter((r) => r.ppid === pid);\n\treturn [...direct, ...direct.flatMap((child) => collectDescendants(records, child.pid))];\n}\n\n// ── Formatting ──────────────────────────────────────────────────────────────\n\nexport function formatMb(kb: number): string {\n\treturn `${Math.round(kb / 1024)} MB`;\n}\n\nexport function formatDuration(seconds: number): string {\n\tif (seconds >= 86_400) return `${Math.floor(seconds / 86_400)}d ${Math.floor((seconds % 86_400) / 3_600)}h`;\n\tif (seconds >= 3_600) return `${Math.floor(seconds / 3_600)}h ${Math.floor((seconds % 3_600) / 60)}m`;\n\tif (seconds >= 60) return `${Math.floor(seconds / 60)}m ${Math.floor(seconds % 60)}s`;\n\treturn `${Math.floor(seconds)}s`;\n}\n\nexport function formatResourceReport(instances: ElyraInstance[]): string {\n\tif (instances.length === 0) {\n\t\treturn \"No other Elyra instances are running.\";\n\t}\n\n\tconst lines: string[] = [];\n\tconst totalKb = instances.reduce((sum, i) => sum + i.totalRssKb, 0);\n\tlines.push(\n\t\t`${instances.length} Elyra instance${instances.length === 1 ? \"\" : \"s\"} running, ${formatMb(totalKb)} total memory:`,\n\t);\n\tlines.push(\"\");\n\n\tconst sorted = [...instances].sort((a, b) => b.totalRssKb - a.totalRssKb);\n\tfor (const instance of sorted) {\n\t\tconst p = instance.process;\n\t\tconst flags = instance.warnings.length > 0 ? `  [${instance.warnings.join(\", \")}]` : \"\";\n\t\tlines.push(\n\t\t\t`- PID ${p.pid}: up ${formatDuration(p.elapsedSeconds)}, ` +\n\t\t\t\t`${formatDuration(p.cpuSeconds)} CPU time, ${formatMb(instance.totalRssKb)}${flags}`,\n\t\t);\n\t\tfor (const child of instance.children) {\n\t\t\tconst label = classifyChild(child.command);\n\t\t\tif (!label) continue;\n\t\t\tlines.push(`    child: ${label} (PID ${child.pid}, ${formatMb(child.rssKb)})`);\n\t\t}\n\t}\n\n\tconst forgotten = sorted.filter((i) => i.warnings.length >= 2);\n\tif (forgotten.length > 0) {\n\t\tlines.push(\"\");\n\t\tlines.push(\n\t\t\t`${forgotten.length} instance${forgotten.length === 1 ? \" looks\" : \"s look\"} forgotten. ` +\n\t\t\t\t`Close the terminal running ${forgotten.length === 1 ? \"it\" : \"them\"}, or: kill ${forgotten.map((i) => i.process.pid).join(\" \")}`,\n\t\t);\n\t}\n\n\tlines.push(\"\");\n\tlines.push(\"Idle Elyra uses no CPU; memory is held until an instance exits. Language servers\");\n\tlines.push(\"and headless browsers listed above belong to their instance and exit with it.\");\n\n\treturn lines.join(\"\\n\");\n}\n"]}

package/dist/modes/interactive/components/index.d.ts

@@ -17,7 +17,7 @@ export { keyHint, keyText, rawKeyHint } from "./keybinding-hints.js";
 export { LoginDialogComponent } from "./login-dialog.js";
 export { ModelSelectorComponent } from "./model-selector.js";
 export { OAuthSelectorComponent } from "./oauth-selector.js";
-export { PackageBrowserComponent, type PackageBrowserItem } from "./package-browser.js";
+export { type PackageBrowserActions, PackageBrowserComponent, type PackageBrowserItem } from "./package-browser.js";
 export { type RewindPoint, RewindSelectorComponent } from "./rewind-selector.js";
 export { type ModelsCallbacks, type ModelsConfig, ScopedModelsSelectorComponent } from "./scoped-models-selector.js";
 export { SessionSelectorComponent } from "./session-selector.js";

package/dist/modes/interactive/components/index.d.ts.map

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package/dist/modes/interactive/components/index.js.map

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