@elnora-ai/mcp-server 0.2.0 → 0.4.0

package/dist/tools/protocols.js

@@ -1,41 +1,26 @@
 import { z } from "zod";
 import { handleApiError } from "../services/error-handler.js";
 import { withGuard } from "./with-guard.js";
+import { LONG_REQUEST_TIMEOUT_MS } from "../constants.js";
 export function registerProtocolTools(server, getClient, getContext) {
     server.registerTool("elnora_generate_protocol", {
         title: "Generate Protocol",
-        description: `Generate a bioprotocol using Elnora's AI agents. This is a convenience tool that creates a task, sends the description as a message, and returns the generated protocol content. This is the primary tool for hackathon partners. The operation typically takes 30-120 seconds.
-
-Examples:
-  - "Generate a HEK 293 cell maintenance protocol"
-  - "Create a CRISPR guide RNA design protocol for BRCA1"
-  - "Write a western blot protocol for detecting p53 in HeLa cells"`,
+        description: "Generate a bioprotocol using Elnora AI. Creates a task, sends the description, and returns the result. Takes 30-120s.",
         inputSchema: {
             description: z.string().min(10).max(5000).describe("Protocol description"),
-            title: z.string().max(200).optional().describe("Task title (defaults to description preview)"),
-        },
-        annotations: {
-            readOnlyHint: false,
-            destructiveHint: false,
-            idempotentHint: false,
-            openWorldHint: true,
+            title: z.string().max(200).optional().describe("Task title"),
         },
+        annotations: { readOnlyHint: false, destructiveHint: false, idempotentHint: false, openWorldHint: true },
     }, withGuard("elnora_generate_protocol", getContext, async ({ description, title }) => {
         try {
             const client = getClient();
-            // 1. Create a task
-            const taskTitle = title || description.slice(0, 100);
-            const task = await client.createTask(taskTitle);
-            // 2. Send the description as a message
+            const task = await client.post("/tasks", { title: title || description.slice(0, 100) }, { timeout: LONG_REQUEST_TIMEOUT_MS });
             const response = await client.sendMessage(task.id, description);
-            // 3. Return the result
-            const result = {
-                task_id: task.id,
-                protocol_content: response.content,
-                message_id: response.id,
-            };
             return {
-                content: [{ type: "text", text: JSON.stringify(result, null, 2) }],
+                content: [{ type: "text", text: JSON.stringify({
+                            task_id: task.id,
+                            response,
+                        }) }],
             };
         }
         catch (error) {

package/dist/tools/protocols.js.map

@@ -1 +1 @@
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package/dist/tools/scope-guard.d.ts

@@ -1,14 +1,6 @@
 /**
  * Per-tool scope enforcement.
  * CoSAI MCP-T2: Least privilege — each tool declares required scopes.
- *
- * Scope mapping:
- * - elnora_list_tasks, elnora_get_task_messages → tasks:read
- * - elnora_create_task → tasks:write
- * - elnora_send_message → messages:write
- * - elnora_list_files, elnora_get_file_content → files:read
- * - elnora_upload_file → files:write
- * - elnora_generate_protocol → tasks:write, messages:write
  */
 export declare const TOOL_SCOPES: Record<string, string[]>;
 /**

package/dist/tools/scope-guard.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"scope-guard.d.ts","sourceRoot":"","sources":["../../src/tools/scope-guard.ts"],"names":[],"mappings":"AAAA;;;GAGG;AACH,eAAO,MAAM,WAAW,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,EAAE,CAsGhD,CAAC;AAEF;;;GAGG;AACH,wBAAgB,eAAe,CAAC,QAAQ,EAAE,MAAM,EAAE,aAAa,EAAE,MAAM,EAAE,GAAG,MAAM,EAAE,CAQnF"}

package/dist/tools/scope-guard.js

@@ -1,24 +1,96 @@
 /**
  * Per-tool scope enforcement.
  * CoSAI MCP-T2: Least privilege — each tool declares required scopes.
- *
- * Scope mapping:
- * - elnora_list_tasks, elnora_get_task_messages → tasks:read
- * - elnora_create_task → tasks:write
- * - elnora_send_message → messages:write
- * - elnora_list_files, elnora_get_file_content → files:read
- * - elnora_upload_file → files:write
- * - elnora_generate_protocol → tasks:write, messages:write
  */
 export const TOOL_SCOPES = {
+    // Tasks
     elnora_list_tasks: ["tasks:read"],
+    elnora_get_task: ["tasks:read"],
     elnora_get_task_messages: ["tasks:read"],
     elnora_create_task: ["tasks:write"],
+    elnora_update_task: ["tasks:write"],
+    elnora_archive_task: ["tasks:write"],
+    // Messages
     elnora_send_message: ["messages:write"],
+    // Files
     elnora_list_files: ["files:read"],
+    elnora_get_file: ["files:read"],
     elnora_get_file_content: ["files:read"],
+    elnora_get_file_versions: ["files:read"],
+    elnora_get_version_content: ["files:read"],
     elnora_upload_file: ["files:write"],
+    elnora_create_file: ["files:write"],
+    elnora_update_file: ["files:write"],
+    elnora_archive_file: ["files:write"],
+    elnora_download_file: ["files:read"],
+    elnora_create_version: ["files:write"],
+    elnora_restore_version: ["files:write"],
+    elnora_promote_file: ["files:write"],
+    elnora_fork_file: ["files:write"],
+    elnora_create_working_copy: ["files:write"],
+    elnora_commit_working_copy: ["files:write"],
+    elnora_initiate_upload: ["files:write"],
+    elnora_confirm_upload: ["files:write"],
+    // Projects
+    elnora_list_projects: ["projects:read"],
+    elnora_get_project: ["projects:read"],
+    elnora_create_project: ["projects:write"],
+    elnora_update_project: ["projects:write"],
+    elnora_archive_project: ["projects:write"],
+    elnora_list_project_members: ["projects:read"],
+    elnora_add_project_member: ["projects:write"],
+    elnora_update_project_member_role: ["projects:write"],
+    elnora_remove_project_member: ["projects:write"],
+    elnora_leave_project: ["projects:write"],
+    // Search
+    elnora_search_tasks: ["search:read"],
+    elnora_search_files: ["search:read"],
+    elnora_search_all: ["search:read"],
+    // Organizations
+    elnora_list_orgs: ["orgs:read"],
+    elnora_get_org: ["orgs:read"],
+    elnora_create_org: ["orgs:write"],
+    elnora_update_org: ["orgs:write"],
+    elnora_list_org_members: ["orgs:read"],
+    elnora_update_org_member_role: ["orgs:write"],
+    elnora_remove_org_member: ["orgs:write"],
+    elnora_get_org_billing: ["orgs:read"],
+    elnora_invite_org_member: ["orgs:write"],
+    elnora_list_org_invitations: ["orgs:read"],
+    elnora_cancel_org_invitation: ["orgs:write"],
+    elnora_get_invitation_info: ["orgs:read"],
+    elnora_accept_invitation: ["orgs:write"],
+    // Folders
+    elnora_list_folders: ["folders:read"],
+    elnora_create_folder: ["folders:write"],
+    elnora_rename_folder: ["folders:write"],
+    elnora_move_folder: ["folders:write"],
+    elnora_delete_folder: ["folders:write"],
+    // Library
+    elnora_list_library_files: ["library:read"],
+    elnora_list_library_folders: ["library:read"],
+    elnora_create_library_folder: ["library:write"],
+    elnora_rename_library_folder: ["library:write"],
+    elnora_delete_library_folder: ["library:write"],
+    // API Keys
+    elnora_list_api_keys: ["api-keys:read"],
+    elnora_create_api_key: ["api-keys:write"],
+    elnora_revoke_api_key: ["api-keys:write"],
+    // Audit
+    elnora_list_audit_log: ["audit:read"],
+    // Account
+    elnora_get_account: ["account:read"],
+    elnora_update_account: ["account:write"],
+    elnora_list_agreements: ["account:read"],
+    elnora_accept_terms: ["account:write"],
+    // Feedback
+    elnora_submit_feedback: ["feedback:write"],
+    // Protocol (convenience)
     elnora_generate_protocol: ["tasks:write", "messages:write"],
+    // Flags & Health — no scopes required (public endpoints)
+    elnora_list_flags: [],
+    elnora_get_flag: [],
+    elnora_health_check: [],
 };
 /**
  * Check if the given scopes satisfy the required scopes for a tool.
@@ -26,8 +98,11 @@ export const TOOL_SCOPES = {
  */
 export function checkToolScopes(toolName, grantedScopes) {
     const required = TOOL_SCOPES[toolName];
-    if (!required)
-        return []; // Unknown tool — no scope check
+    if (!required) {
+        // Deny-by-default: unknown tools must not bypass scope checks (CoSAI MCP-T2)
+        return ["unknown_tool"];
+    }
+    // Empty array means no scopes required (e.g. health check) — always allowed
     return required.filter((s) => !grantedScopes.includes(s));
 }
 //# sourceMappingURL=scope-guard.js.map

package/dist/tools/scope-guard.js.map

@@ -1 +1 @@
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package/dist/tools/search.d.ts

@@ -0,0 +1,5 @@
+import { McpServer } from "@modelcontextprotocol/sdk/server/mcp.js";
+import { ElnoraApiClient } from "../services/elnora-api-client.js";
+import { RequestContext } from "../server.js";
+export declare function registerSearchTools(server: McpServer, getClient: () => ElnoraApiClient, getContext: () => RequestContext): void;
+//# sourceMappingURL=search.d.ts.map

package/dist/tools/search.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"search.d.ts","sourceRoot":"","sources":["../../src/tools/search.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAEpE,OAAO,EAAE,eAAe,EAAE,MAAM,kCAAkC,CAAC;AACnE,OAAO,EAAE,cAAc,EAAE,MAAM,cAAc,CAAC;AAI9C,wBAAgB,mBAAmB,CACjC,MAAM,EAAE,SAAS,EACjB,SAAS,EAAE,MAAM,eAAe,EAChC,UAAU,EAAE,MAAM,cAAc,GAC/B,IAAI,CAkEN"}

package/dist/tools/search.js

@@ -0,0 +1,60 @@
+import { z } from "zod";
+import { handleApiError } from "../services/error-handler.js";
+import { withGuard } from "./with-guard.js";
+export function registerSearchTools(server, getClient, getContext) {
+    server.registerTool("elnora_search_tasks", {
+        title: "Search Tasks",
+        description: "Full-text search across tasks.",
+        inputSchema: {
+            query: z.string().min(1).max(1000).describe("Search query"),
+            page: z.number().int().min(1).default(1).describe("Page number"),
+            page_size: z.number().int().min(1).max(100).default(25).describe("Results per page"),
+        },
+        annotations: { readOnlyHint: true, destructiveHint: false, idempotentHint: true, openWorldHint: true },
+    }, withGuard("elnora_search_tasks", getContext, async ({ query, page, page_size }) => {
+        try {
+            const result = await getClient().get("/search/tasks", { q: query, page, pageSize: page_size });
+            return { content: [{ type: "text", text: JSON.stringify(result) }] };
+        }
+        catch (error) {
+            return { content: [{ type: "text", text: handleApiError(error) }], isError: true };
+        }
+    }));
+    server.registerTool("elnora_search_files", {
+        title: "Search Files",
+        description: "Full-text search across files.",
+        inputSchema: {
+            query: z.string().min(1).max(1000).describe("Search query"),
+            page: z.number().int().min(1).default(1).describe("Page number"),
+            page_size: z.number().int().min(1).max(100).default(25).describe("Results per page"),
+        },
+        annotations: { readOnlyHint: true, destructiveHint: false, idempotentHint: true, openWorldHint: true },
+    }, withGuard("elnora_search_files", getContext, async ({ query, page, page_size }) => {
+        try {
+            const result = await getClient().get("/search/files", { q: query, page, pageSize: page_size });
+            return { content: [{ type: "text", text: JSON.stringify(result) }] };
+        }
+        catch (error) {
+            return { content: [{ type: "text", text: handleApiError(error) }], isError: true };
+        }
+    }));
+    server.registerTool("elnora_search_all", {
+        title: "Search All",
+        description: "Full-text search across all resources (tasks, files, etc.).",
+        inputSchema: {
+            query: z.string().min(1).max(1000).describe("Search query"),
+            page: z.number().int().min(1).default(1).describe("Page number"),
+            page_size: z.number().int().min(1).max(100).default(25).describe("Results per page"),
+        },
+        annotations: { readOnlyHint: true, destructiveHint: false, idempotentHint: true, openWorldHint: true },
+    }, withGuard("elnora_search_all", getContext, async ({ query, page, page_size }) => {
+        try {
+            const result = await getClient().get("/search", { q: query, page, pageSize: page_size });
+            return { content: [{ type: "text", text: JSON.stringify(result) }] };
+        }
+        catch (error) {
+            return { content: [{ type: "text", text: handleApiError(error) }], isError: true };
+        }
+    }));
+}
+//# sourceMappingURL=search.js.map

package/dist/tools/search.js.map

@@ -0,0 +1 @@
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package/dist/tools/tasks.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"tasks.d.ts","sourceRoot":"","sources":["../../src/tools/tasks.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAEpE,OAAO,EAAE,eAAe,EAAE,MAAM,kCAAkC,CAAC;AACnE,OAAO,EAAE,cAAc,EAAE,MAAM,cAAc,CAAC;AAI9C,wBAAgB,iBAAiB,CAC/B,MAAM,EAAE,SAAS,EACjB,SAAS,EAAE,MAAM,eAAe,EAChC,UAAU,EAAE,MAAM,cAAc,GAC/B,IAAI,CA8EN"}
+{"version":3,"file":"tasks.d.ts","sourceRoot":"","sources":["../../src/tools/tasks.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAEpE,OAAO,EAAE,eAAe,EAAE,MAAM,kCAAkC,CAAC;AACnE,OAAO,EAAE,cAAc,EAAE,MAAM,cAAc,CAAC;AAI9C,wBAAgB,iBAAiB,CAC/B,MAAM,EAAE,SAAS,EACjB,SAAS,EAAE,MAAM,eAAe,EAChC,UAAU,EAAE,MAAM,cAAc,GAC/B,IAAI,CAyIN"}

package/dist/tools/tasks.js

@@ -4,22 +4,25 @@ import { withGuard } from "./with-guard.js";
 export function registerTaskTools(server, getClient, getContext) {
     server.registerTool("elnora_create_task", {
         title: "Create Task",
-        description: "Create a new task (conversation) in Elnora. Tasks are the primary unit of interaction — each task is a chat thread where you can send messages and receive AI agent responses.",
+        description: "Create a new task (conversation thread). Each task is a chat where you send messages and receive AI responses.",
         inputSchema: {
-            title: z.string().max(200).optional().describe("Task title (e.g., 'HEK 293 protocol generation')"),
+            project_id: z.string().uuid().optional().describe("Project UUID (optional)"),
+            title: z.string().max(200).optional().describe("Task title"),
+            initial_message: z.string().max(50_000).optional().describe("Initial message to send"),
+            context_file_ids: z.array(z.string().uuid()).optional().describe("File IDs for context"),
         },
-        annotations: {
-            readOnlyHint: false,
-            destructiveHint: false,
-            idempotentHint: false,
-            openWorldHint: true,
-        },
-    }, withGuard("elnora_create_task", getContext, async ({ title }) => {
+        annotations: { readOnlyHint: false, destructiveHint: false, idempotentHint: false, openWorldHint: true },
+    }, withGuard("elnora_create_task", getContext, async ({ project_id, title, initial_message, context_file_ids }) => {
         try {
-            const task = await getClient().createTask(title);
-            return {
-                content: [{ type: "text", text: JSON.stringify(task, null, 2) }],
-            };
+            const body = { title: title || "New Task" };
+            if (project_id)
+                body.projectId = project_id;
+            if (initial_message)
+                body.initialMessage = initial_message;
+            if (context_file_ids)
+                body.contextFileIds = context_file_ids;
+            const result = await getClient().post("/tasks", body);
+            return { content: [{ type: "text", text: JSON.stringify(result) }] };
         }
         catch (error) {
             return { content: [{ type: "text", text: handleApiError(error) }], isError: true };
@@ -27,19 +30,35 @@ export function registerTaskTools(server, getClient, getContext) {
     }));
     server.registerTool("elnora_list_tasks", {
         title: "List Tasks",
-        description: "List tasks in your Elnora workspace. Returns task summaries with status and timestamps.",
+        description: "List tasks. Optionally filter by project or status.",
         inputSchema: {
-            status: z.string().optional().describe("Filter by task status"),
-            limit: z.number().int().min(1).max(100).default(20).describe("Max results"),
-            offset: z.number().int().min(0).default(0).describe("Pagination offset"),
+            project_id: z.string().uuid().optional().describe("Filter by project UUID"),
+            status: z.string().optional().describe("Filter by status"),
+            page: z.number().int().min(1).default(1).describe("Page number"),
+            page_size: z.number().int().min(1).max(100).default(25).describe("Results per page"),
         },
         annotations: { readOnlyHint: true, destructiveHint: false, idempotentHint: true, openWorldHint: true },
-    }, withGuard("elnora_list_tasks", getContext, async ({ status, limit, offset }) => {
+    }, withGuard("elnora_list_tasks", getContext, async ({ project_id, status, page, page_size }) => {
         try {
-            const result = await getClient().listTasks(status, limit, offset);
-            return {
-                content: [{ type: "text", text: JSON.stringify(result, null, 2) }],
-            };
+            const path = project_id ? `/projects/${project_id}/tasks` : "/tasks";
+            const result = await getClient().get(path, { page, pageSize: page_size, status });
+            return { content: [{ type: "text", text: JSON.stringify(result) }] };
+        }
+        catch (error) {
+            return { content: [{ type: "text", text: handleApiError(error) }], isError: true };
+        }
+    }));
+    server.registerTool("elnora_get_task", {
+        title: "Get Task",
+        description: "Get a single task by UUID.",
+        inputSchema: {
+            task_id: z.string().uuid().describe("Task UUID"),
+        },
+        annotations: { readOnlyHint: true, destructiveHint: false, idempotentHint: true, openWorldHint: true },
+    }, withGuard("elnora_get_task", getContext, async ({ task_id }) => {
+        try {
+            const result = await getClient().get(`/tasks/${task_id}`);
+            return { content: [{ type: "text", text: JSON.stringify(result) }] };
         }
         catch (error) {
             return { content: [{ type: "text", text: handleApiError(error) }], isError: true };
@@ -47,19 +66,54 @@ export function registerTaskTools(server, getClient, getContext) {
     }));
     server.registerTool("elnora_get_task_messages", {
         title: "Get Task Messages",
-        description: "Get the message history for a specific task. Returns user and assistant messages in chronological order.",
+        description: "Get message history for a task.",
         inputSchema: {
             task_id: z.string().uuid().describe("Task UUID"),
             limit: z.number().int().min(1).max(100).default(50).describe("Max messages"),
-            offset: z.number().int().min(0).default(0).describe("Pagination offset"),
+            cursor: z.string().optional().describe("Cursor for pagination"),
         },
         annotations: { readOnlyHint: true, destructiveHint: false, idempotentHint: true, openWorldHint: true },
-    }, withGuard("elnora_get_task_messages", getContext, async ({ task_id, limit, offset }) => {
+    }, withGuard("elnora_get_task_messages", getContext, async ({ task_id, limit, cursor }) => {
+        try {
+            const params = { limit };
+            if (cursor)
+                params.cursor = cursor;
+            const result = await getClient().get(`/tasks/${task_id}/messages`, params);
+            return { content: [{ type: "text", text: JSON.stringify(result) }] };
+        }
+        catch (error) {
+            return { content: [{ type: "text", text: handleApiError(error) }], isError: true };
+        }
+    }));
+    server.registerTool("elnora_update_task", {
+        title: "Update Task",
+        description: "Update task title or status.",
+        inputSchema: {
+            task_id: z.string().uuid().describe("Task UUID"),
+            title: z.string().max(200).optional().describe("New title"),
+            status: z.string().optional().describe("New status"),
+        },
+        annotations: { readOnlyHint: false, destructiveHint: false, idempotentHint: true, openWorldHint: true },
+    }, withGuard("elnora_update_task", getContext, async ({ task_id, title, status }) => {
+        try {
+            const result = await getClient().put(`/tasks/${task_id}`, { title, status });
+            return { content: [{ type: "text", text: JSON.stringify(result) }] };
+        }
+        catch (error) {
+            return { content: [{ type: "text", text: handleApiError(error) }], isError: true };
+        }
+    }));
+    server.registerTool("elnora_archive_task", {
+        title: "Archive Task",
+        description: "Archive (delete) a task.",
+        inputSchema: {
+            task_id: z.string().uuid().describe("Task UUID"),
+        },
+        annotations: { readOnlyHint: false, destructiveHint: true, idempotentHint: true, openWorldHint: true },
+    }, withGuard("elnora_archive_task", getContext, async ({ task_id }) => {
         try {
-            const result = await getClient().getTaskMessages(task_id, limit, offset);
-            return {
-                content: [{ type: "text", text: JSON.stringify(result, null, 2) }],
-            };
+            await getClient().del(`/tasks/${task_id}`);
+            return { content: [{ type: "text", text: JSON.stringify({ archived: true, taskId: task_id }) }] };
         }
         catch (error) {
             return { content: [{ type: "text", text: handleApiError(error) }], isError: true };

package/dist/tools/tasks.js.map

@@ -1 +1 @@
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package/dist/tools/with-guard.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"with-guard.d.ts","sourceRoot":"","sources":["../../src/tools/with-guard.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,cAAc,EAAE,MAAM,cAAc,CAAC;AAI9C;;;GAGG;AACH,wBAAgB,SAAS,CAAC,CAAC,SAAS,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EACzD,QAAQ,EAAE,MAAM,EAChB,UAAU,EAAE,MAAM,cAAc,EAChC,OAAO,EAAE,CAAC,MAAM,EAAE,CAAC,KAAK,OAAO,CAAC;IAAE,OAAO,EAAE;QAAE,IAAI,EAAE,MAAM,CAAC;QAAC,IAAI,EAAE,MAAM,CAAA;KAAE,EAAE,CAAC;IAAC,OAAO,CAAC,EAAE,OAAO,CAAA;CAAE,CAAC,GAChG,CAAC,MAAM,EAAE,CAAC,KAAK,OAAO,CAAC;IAAE,OAAO,EAAE;QAAE,IAAI,EAAE,MAAM,CAAC;QAAC,IAAI,EAAE,MAAM,CAAA;KAAE,EAAE,CAAC;IAAC,OAAO,CAAC,EAAE,OAAO,CAAA;CAAE,CAAC,CA0B1F"}
+{"version":3,"file":"with-guard.d.ts","sourceRoot":"","sources":["../../src/tools/with-guard.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,cAAc,EAAE,MAAM,cAAc,CAAC;AAI9C;;;GAGG;AACH,wBAAgB,SAAS,CAAC,CAAC,SAAS,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EACzD,QAAQ,EAAE,MAAM,EAChB,UAAU,EAAE,MAAM,cAAc,EAChC,OAAO,EAAE,CAAC,MAAM,EAAE,CAAC,KAAK,OAAO,CAAC;IAAE,OAAO,EAAE;QAAE,IAAI,EAAE,MAAM,CAAC;QAAC,IAAI,EAAE,MAAM,CAAA;KAAE,EAAE,CAAC;IAAC,OAAO,CAAC,EAAE,OAAO,CAAA;CAAE,CAAC,GAChG,CAAC,MAAM,EAAE,CAAC,KAAK,OAAO,CAAC;IAAE,OAAO,EAAE;QAAE,IAAI,EAAE,MAAM,CAAC;QAAC,IAAI,EAAE,MAAM,CAAA;KAAE,EAAE,CAAC;IAAC,OAAO,CAAC,EAAE,OAAO,CAAA;CAAE,CAAC,CAwC1F"}

package/dist/tools/with-guard.js

@@ -21,12 +21,27 @@ export function withGuard(toolName, getContext, handler) {
             };
         }
         // Execute handler
-        const result = await handler(params);
-        logToolInvocation(toolName, params, ctx.clientId, {
-            success: !result.isError,
-            durationMs: Date.now() - start,
-        });
-        return result;
+        try {
+            const result = await handler(params);
+            logToolInvocation(toolName, params, ctx.clientId, {
+                success: !result.isError,
+                durationMs: Date.now() - start,
+            });
+            return result;
+        }
+        catch (error) {
+            logToolInvocation(toolName, params, ctx.clientId, {
+                success: false,
+                durationMs: Date.now() - start,
+            });
+            return {
+                content: [{
+                        type: "text",
+                        text: `Error: Unexpected error in ${toolName}: ${error instanceof Error ? error.message : String(error)}`,
+                    }],
+                isError: true,
+            };
+        }
     };
 }
 //# sourceMappingURL=with-guard.js.map

package/dist/tools/with-guard.js.map

@@ -1 +1 @@
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package/dist/types.d.ts

@@ -1,6 +1,5 @@
 export interface ElnoraConfig {
     apiUrl: string;
-    authUrl: string;
     tokenValidationUrl: string;
     port: number;
     /** Public-facing base URL of the MCP server (e.g. https://mcp.elnora.ai) */
@@ -14,48 +13,6 @@ export interface ElnoraConfig {
     /** Client secret for the MCP server as an OAuth client of the Elnora platform */
     platformClientSecret: string;
 }
-export interface AuthContext {
-    userId: number;
-    organizationId: string;
-    scopes: string;
-    tokenType: string;
-}
-export interface ElnoraTask {
-    id: string;
-    title: string;
-    status: string;
-    createdAt: string;
-    updatedAt: string;
-}
-export interface ElnoraMessage {
-    id: string;
-    taskId: string;
-    role: "user" | "assistant";
-    content: string;
-    createdAt: string;
-    agentName?: string;
-}
-export interface ElnoraFile {
-    id: string;
-    name: string;
-    fileType: string;
-    visibility: string;
-    createdAt: string;
-    latestVersionId?: string;
-}
-export interface TokenValidationResult {
-    valid: boolean;
-    userId?: number;
-    organizationId?: string;
-    scopes?: string;
-    tokenType?: string;
-}
-export interface PaginatedResponse<T> {
-    items: T[];
-    totalCount: number;
-    hasMore: boolean;
-    nextOffset?: number;
-}
 /** Stored authorization session for PKCE flow */
 export interface AuthorizationSession {
     clientId: string;

package/dist/types.d.ts.map

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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@elnora-ai/mcp-server",
-  "version": "0.2.0",
+  "version": "0.4.0",
   "mcpName": "io.github.Elnora-AI/elnora-mcp-server",
   "description": "MCP server for Elnora Platform — AI-powered bioprotocol optimization",
   "type": "module",
@@ -43,6 +43,7 @@
     "@modelcontextprotocol/sdk": "^1.27.0",
     "axios": "^1.8.0",
     "express": "^5.1.0",
+    "express-rate-limit": "^8.3.0",
     "zod": "^3.24.0"
   },
   "devDependencies": {