@elaraai/e3-core 1.0.5 → 1.0.7

package/dist/src/execution/runDetached.d.ts

@@ -0,0 +1,83 @@
+/**
+ * Copyright (c) 2025 Elara AI Pty Ltd
+ * Licensed under BSL 1.1. See LICENSE for details.
+ */
+import type { RunnerValue } from '@elaraai/e3-types';
+/**
+ * Specification of a detached run.
+ */
+export interface DetachedSpec {
+    /** function: from FunctionObject; one-shot: from request */
+    bodyIr: Uint8Array;
+    /** positional arg values (beast2), already validated for arity */
+    args: Uint8Array[];
+    /** wire runner variant — resolved to argv via buildRunnerArgv */
+    runner: RunnerValue;
+    /** execution limits (all required — the caller applies defaults/clamps) */
+    limits: {
+        timeoutMs: number;
+        maxResultBytes: number;
+        maxLogBytes: number;
+    };
+}
+/**
+ * Result of a detached run.
+ *
+ * - `success`: the runner's output file bytes (beast2), under the size cap
+ * - `failed`: the process exited non-zero (or failed to spawn)
+ * - `too_large`: output over `maxResultBytes` — the bytes are never loaded
+ * - `timed_out`: the process group was killed at `timeoutMs`
+ */
+export type DetachedResult = {
+    kind: 'success';
+    value: Uint8Array;
+    stdout: string;
+    stderr: string;
+    stdoutTruncated: boolean;
+    stderrTruncated: boolean;
+} | {
+    kind: 'failed';
+    exitCode: number;
+    stdout: string;
+    stderr: string;
+    stdoutTruncated: boolean;
+    stderrTruncated: boolean;
+} | {
+    kind: 'too_large';
+    bytes: number;
+    limit: number;
+    stdout: string;
+    stderr: string;
+    stdoutTruncated: boolean;
+    stderrTruncated: boolean;
+} | {
+    kind: 'timed_out';
+    ms: number;
+    stdout: string;
+    stderr: string;
+    stdoutTruncated: boolean;
+    stderrTruncated: boolean;
+};
+/**
+ * Options for {@link runDetached}.
+ */
+export interface DetachedRunOptions {
+    /** AbortSignal for cancellation (kills the process group). */
+    signal?: AbortSignal;
+    /** Anchor directory for the runner-binary PATH walk (replaces the task
+     *  path's "walk up from repo dir" — one-shot has no repo path). The
+     *  process cwd is always searched as well. */
+    runnerSearchDir?: string;
+}
+/**
+ * Run a body IR on a runner, returning the result inline.
+ *
+ * mkScratch → write bodyIr → marshal args → build argv → spawnAndCapture
+ * (bounded-tail stdout/stderr) → on exit 0: fs.stat the output BEFORE
+ * reading; size > maxResultBytes ⇒ too_large (bytes never loaded); else
+ * success(readOutputFile) → finally rm scratch.
+ *
+ * NEVER writes to the object store, execution records, or logs.
+ */
+export declare function runDetached(spec: DetachedSpec, options?: DetachedRunOptions): Promise<DetachedResult>;
+//# sourceMappingURL=runDetached.d.ts.map

package/dist/src/execution/runDetached.d.ts.map

@@ -0,0 +1 @@
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package/dist/src/execution/runDetached.js

@@ -0,0 +1,90 @@
+/**
+ * Copyright (c) 2025 Elara AI Pty Ltd
+ * Licensed under BSL 1.1. See LICENSE for details.
+ */
+/**
+ * Graph-free, persistence-free execution — the shared primitive behind
+ * `e3.function` calls and one-shot execution.
+ *
+ * runDetached: marshal inputs → run a body IR on a chosen runner → return
+ * the result value inline; write nothing durable. No task object, no output
+ * object, no execution record, no logs, no dataset ref. The only disk write
+ * is the transient scratch directory, removed on completion.
+ */
+import * as fs from 'fs/promises';
+import * as path from 'path';
+import { tmpdir } from 'os';
+import { randomBytes } from 'crypto';
+import { marshalBytesToDir, buildRunnerArgv, spawnAndCapture, readOutputFile, } from './processExec.js';
+/**
+ * Run a body IR on a runner, returning the result inline.
+ *
+ * mkScratch → write bodyIr → marshal args → build argv → spawnAndCapture
+ * (bounded-tail stdout/stderr) → on exit 0: fs.stat the output BEFORE
+ * reading; size > maxResultBytes ⇒ too_large (bytes never loaded); else
+ * success(readOutputFile) → finally rm scratch.
+ *
+ * NEVER writes to the object store, execution records, or logs.
+ */
+export async function runDetached(spec, options = {}) {
+    const scratchDir = path.join(tmpdir(), `e3-call-${process.pid}-${Date.now()}-${randomBytes(4).toString('hex')}`);
+    await fs.mkdir(scratchDir, { recursive: true });
+    try {
+        const bodyIrPath = path.join(scratchDir, 'fn.beast2');
+        await fs.writeFile(bodyIrPath, spec.bodyIr);
+        const argPaths = await marshalBytesToDir(scratchDir, spec.args);
+        const outputPath = path.join(scratchDir, 'output.beast2');
+        const args = buildRunnerArgv(spec.runner, argPaths, outputPath, bodyIrPath);
+        const searchDirs = options.runnerSearchDir
+            ? [options.runnerSearchDir, process.cwd()]
+            : [process.cwd()];
+        const result = await spawnAndCapture(args, scratchDir, {
+            timeoutMs: spec.limits.timeoutMs,
+            signal: options.signal,
+            maxLogBytes: spec.limits.maxLogBytes,
+            searchDirs,
+        });
+        const streams = {
+            stdout: result.stdoutTail,
+            stderr: result.stderrTail,
+            stdoutTruncated: result.stdoutTruncated,
+            stderrTruncated: result.stderrTruncated,
+        };
+        if (result.timedOut) {
+            return { kind: 'timed_out', ms: spec.limits.timeoutMs, ...streams };
+        }
+        if (result.exitCode !== 0) {
+            // Spawn failures (exitCode null) also land here; surface the error
+            // text on stderr so the caller sees why nothing ran.
+            if (result.exitCode === null && result.error) {
+                streams.stderr = streams.stderr ? `${streams.stderr}\n${result.error}` : result.error;
+            }
+            return { kind: 'failed', exitCode: result.exitCode ?? -1, ...streams };
+        }
+        // stat BEFORE read — an over-cap result is never loaded into memory.
+        let size;
+        try {
+            size = (await fs.stat(outputPath)).size;
+        }
+        catch {
+            streams.stderr = streams.stderr
+                ? `${streams.stderr}\nRunner exited 0 but wrote no output file`
+                : 'Runner exited 0 but wrote no output file';
+            return { kind: 'failed', exitCode: 0, ...streams };
+        }
+        if (size > spec.limits.maxResultBytes) {
+            return { kind: 'too_large', bytes: size, limit: spec.limits.maxResultBytes, ...streams };
+        }
+        const value = await readOutputFile(outputPath);
+        return { kind: 'success', value, ...streams };
+    }
+    finally {
+        try {
+            await fs.rm(scratchDir, { recursive: true, force: true });
+        }
+        catch {
+            // Ignore cleanup errors
+        }
+    }
+}
+//# sourceMappingURL=runDetached.js.map

package/dist/src/execution/runDetached.js.map

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package/dist/src/execution/runDetached.spec.d.ts

@@ -0,0 +1,6 @@
+/**
+ * Copyright (c) 2025 Elara AI Pty Ltd
+ * Licensed under BSL 1.1. See LICENSE for details.
+ */
+export {};
+//# sourceMappingURL=runDetached.spec.d.ts.map

package/dist/src/execution/runDetached.spec.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"runDetached.spec.d.ts","sourceRoot":"","sources":["../../../src/execution/runDetached.spec.ts"],"names":[],"mappings":"AAAA;;;GAGG"}

package/dist/src/execution/runDetached.spec.js

@@ -0,0 +1,193 @@
+/**
+ * Copyright (c) 2025 Elara AI Pty Ltd
+ * Licensed under BSL 1.1. See LICENSE for details.
+ */
+/**
+ * Tests for the graph-free execution primitive (runDetached) and the
+ * persistence-free process helpers it composes.
+ *
+ * A fake `east-node` runner script (planted in a temp node_modules/.bin and
+ * reached via runnerSearchDir) drives the runner-facing behaviour
+ * deterministically: echo, oversized output, non-zero exit, slow runs.
+ * End-to-end runs against the real east-node runner live in e3-api-tests.
+ */
+import { describe, it, before, after } from 'node:test';
+import assert from 'node:assert/strict';
+import { mkdtempSync, mkdirSync, writeFileSync, rmSync, readdirSync } from 'node:fs';
+import { tmpdir } from 'node:os';
+import * as path from 'node:path';
+import { variant } from '@elaraai/east';
+import { buildRunnerArgv, marshalBytesToDir, spawnAndCapture } from './processExec.js';
+import { runDetached } from './runDetached.js';
+const isWindows = process.platform === 'win32';
+describe('buildRunnerArgv', () => {
+    it('builds the runner argv from the wire variant', () => {
+        const argv = buildRunnerArgv(variant('east_node', { platforms: ['@elaraai/east-node-std'] }), ['/tmp/a.beast2', '/tmp/b.beast2'], '/tmp/out.beast2', '/tmp/fn.beast2');
+        assert.deepEqual(argv, [
+            'east-node', 'run', '-p', '@elaraai/east-node-std',
+            '-i', '/tmp/a.beast2', '-i', '/tmp/b.beast2',
+            '-o', '/tmp/out.beast2',
+            '/tmp/fn.beast2',
+        ]);
+    });
+    it('maps each runtime tag to its binary name', () => {
+        assert.equal(buildRunnerArgv(variant('east_py', { platforms: [] }), [], 'o', 'f')[0], 'east-py');
+        assert.equal(buildRunnerArgv(variant('east_c', { platforms: [] }), [], 'o', 'f')[0], 'east-c');
+    });
+});
+describe('marshalBytesToDir', () => {
+    it('stages each blob as input-<i>.beast2 in order', async () => {
+        const dir = mkdtempSync(path.join(tmpdir(), 'e3-marshal-'));
+        try {
+            const paths = await marshalBytesToDir(dir, [new Uint8Array([1]), new Uint8Array([2, 3])]);
+            assert.deepEqual(paths.map((p) => path.basename(p)), ['input-0.beast2', 'input-1.beast2']);
+        }
+        finally {
+            rmSync(dir, { recursive: true, force: true });
+        }
+    });
+});
+describe('spawnAndCapture', { skip: isWindows }, () => {
+    let scratch;
+    before(() => {
+        scratch = mkdtempSync(path.join(tmpdir(), 'e3-spawn-'));
+    });
+    after(() => {
+        rmSync(scratch, { recursive: true, force: true });
+    });
+    it('captures exit code 0 and stdout', async () => {
+        const result = await spawnAndCapture(['node', '-e', 'console.log("hello out"); console.error("hello err");'], scratch);
+        assert.equal(result.exitCode, 0);
+        assert.equal(result.error, null);
+        assert.equal(result.timedOut, false);
+        assert.match(result.stdoutTail, /hello out/);
+        assert.match(result.stderrTail, /hello err/);
+        assert.equal(result.stdoutTruncated, false);
+    });
+    it('reports a non-zero exit with the stderr tail in the error', async () => {
+        const result = await spawnAndCapture(['node', '-e', 'console.error("boom"); process.exit(3);'], scratch);
+        assert.equal(result.exitCode, 3);
+        assert.match(result.error ?? '', /Exit code: 3/);
+        assert.match(result.error ?? '', /boom/);
+    });
+    it('bounds stream tails and sets truncated flags', async () => {
+        const result = await spawnAndCapture(['node', '-e', 'process.stdout.write("x".repeat(5000));'], scratch, { maxLogBytes: 100 });
+        assert.equal(result.exitCode, 0);
+        assert.equal(result.stdoutTail.length, 100);
+        assert.equal(result.stdoutTruncated, true);
+    });
+    it('kills the process group on timeout', async () => {
+        const start = Date.now();
+        const result = await spawnAndCapture(['node', '-e', 'setTimeout(() => {}, 30000);'], scratch, { timeoutMs: 300 });
+        assert.equal(result.timedOut, true);
+        assert.notEqual(result.exitCode, 0);
+        assert.ok(Date.now() - start < 10_000, 'timeout did not kill the process promptly');
+    });
+    it('reports spawn failures as an error with null exit code', async () => {
+        const result = await spawnAndCapture(['definitely-not-a-real-binary-xyz', 'run'], scratch);
+        assert.equal(result.exitCode, null);
+        assert.match(result.error ?? '', /Failed to spawn/);
+    });
+});
+describe('runDetached', { skip: isWindows }, () => {
+    let searchDir;
+    // A fake `east-node` runner with the real CLI contract:
+    //   east-node run [-p name]... [-i input]... -o output <bodyIr>
+    // Behaviour is selected by FAKE_RUNNER_MODE (inherited env):
+    //   echo (default) - copy input-0 (or the bodyIr) to the output
+    //   big            - write 4 KiB to the output
+    //   fail           - print to stderr, exit 3, no output
+    //   sleep          - sleep 30 s
+    //   silent-ok      - exit 0 WITHOUT writing the output file
+    const FAKE_RUNNER = `#!/usr/bin/env node
+const fs = require('fs');
+const args = process.argv.slice(2);
+const inputs = [];
+let output = null;
+let bodyIr = null;
+for (let i = 0; i < args.length; i++) {
+  if (args[i] === 'run') continue;
+  else if (args[i] === '-p') i++;
+  else if (args[i] === '-i') inputs.push(args[++i]);
+  else if (args[i] === '-o') output = args[++i];
+  else bodyIr = args[i];
+}
+const mode = process.env.FAKE_RUNNER_MODE || 'echo';
+if (mode === 'fail') { console.error('fake runner failure'); process.exit(3); }
+if (mode === 'sleep') { setTimeout(() => {}, 30000); }
+else if (mode === 'big') { fs.writeFileSync(output, Buffer.alloc(4096, 7)); }
+else if (mode === 'silent-ok') { /* exit 0, no output */ }
+else { fs.copyFileSync(inputs[0] ?? bodyIr, output); }
+`;
+    const limits = { timeoutMs: 60_000, maxResultBytes: 1024, maxLogBytes: 64 * 1024 };
+    const runner = variant('east_node', { platforms: [] });
+    const withMode = async (mode, fn) => {
+        const prev = process.env.FAKE_RUNNER_MODE;
+        if (mode === undefined)
+            delete process.env.FAKE_RUNNER_MODE;
+        else
+            process.env.FAKE_RUNNER_MODE = mode;
+        try {
+            return await fn();
+        }
+        finally {
+            if (prev === undefined)
+                delete process.env.FAKE_RUNNER_MODE;
+            else
+                process.env.FAKE_RUNNER_MODE = prev;
+        }
+    };
+    before(() => {
+        searchDir = mkdtempSync(path.join(tmpdir(), 'e3-fake-runner-'));
+        const binDir = path.join(searchDir, 'node_modules', '.bin');
+        mkdirSync(binDir, { recursive: true });
+        writeFileSync(path.join(binDir, 'east-node'), FAKE_RUNNER, { mode: 0o755 });
+    });
+    after(() => {
+        rmSync(searchDir, { recursive: true, force: true });
+    });
+    it('returns the output bytes inline on success', async () => {
+        const payload = new Uint8Array([10, 20, 30]);
+        const result = await withMode(undefined, () => runDetached({ bodyIr: new Uint8Array([0]), args: [payload], runner, limits }, { runnerSearchDir: searchDir }));
+        assert.equal(result.kind, 'success');
+        assert.deepEqual(new Uint8Array(result.value), payload);
+    });
+    it('cleans up its scratch directory', async () => {
+        const before = readdirSync(tmpdir()).filter((d) => d.startsWith('e3-call-')).length;
+        await withMode(undefined, () => runDetached({ bodyIr: new Uint8Array([0]), args: [new Uint8Array([1])], runner, limits }, { runnerSearchDir: searchDir }));
+        const after = readdirSync(tmpdir()).filter((d) => d.startsWith('e3-call-')).length;
+        assert.ok(after <= before, 'scratch directory leaked');
+    });
+    it('fails closed with too_large when the output exceeds maxResultBytes', async () => {
+        const result = await withMode('big', () => runDetached({ bodyIr: new Uint8Array([0]), args: [], runner, limits: { ...limits, maxResultBytes: 100 } }, { runnerSearchDir: searchDir }));
+        assert.equal(result.kind, 'too_large');
+        const tooLarge = result;
+        assert.equal(tooLarge.bytes, 4096);
+        assert.equal(tooLarge.limit, 100);
+    });
+    it('reports non-zero exits as failed with the stderr tail', async () => {
+        const result = await withMode('fail', () => runDetached({ bodyIr: new Uint8Array([0]), args: [], runner, limits }, { runnerSearchDir: searchDir }));
+        assert.equal(result.kind, 'failed');
+        assert.equal(result.exitCode, 3);
+        assert.match(result.stderr, /fake runner failure/);
+    });
+    it('reports exit-0-without-output as failed', async () => {
+        const result = await withMode('silent-ok', () => runDetached({ bodyIr: new Uint8Array([0]), args: [], runner, limits }, { runnerSearchDir: searchDir }));
+        assert.equal(result.kind, 'failed');
+        assert.match(result.stderr, /no output file/);
+    });
+    it('times out long runs via process-group kill', async () => {
+        const result = await withMode('sleep', () => runDetached({ bodyIr: new Uint8Array([0]), args: [], runner, limits: { ...limits, timeoutMs: 300 } }, { runnerSearchDir: searchDir }));
+        assert.equal(result.kind, 'timed_out');
+        assert.equal(result.ms, 300);
+    });
+    it('is cancellable via AbortSignal', async () => {
+        const abort = new AbortController();
+        const promise = withMode('sleep', () => runDetached({ bodyIr: new Uint8Array([0]), args: [], runner, limits }, { runnerSearchDir: searchDir, signal: abort.signal }));
+        setTimeout(() => abort.abort(), 200);
+        const result = await promise;
+        // Killed by signal → non-success; exact kind is failed (exit by signal)
+        assert.notEqual(result.kind, 'success');
+    });
+});
+//# sourceMappingURL=runDetached.spec.js.map

package/dist/src/execution/runDetached.spec.js.map

@@ -0,0 +1 @@
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package/dist/src/executions.spec.js

@@ -223,7 +223,7 @@ describe('executions', () => {
                 commandIr: 'a'.repeat(64), // Non-existent hash
                 inputs: [],
                 output: [],
-                kind: variant('none', null), metadata: variant('none', null),
+                kind: variant('none', null), metadata: variant('none', null), runner: variant('custom', { command: [] }),
             };
             const encoder = encodeBeast2For(TaskObjectType);
             const taskHash = await objectWrite(testRepo, encoder(task));
@@ -243,7 +243,7 @@ describe('executions', () => {
                 commandIr: commandIrHash,
                 inputs: [[variant('field', 'test')]],
                 output: [variant('field', 'output')],
-                kind: variant('none', null), metadata: variant('none', null),
+                kind: variant('none', null), metadata: variant('none', null), runner: variant('custom', { command: [] }),
             };
             const encoder = encodeBeast2For(TaskObjectType);
             const taskHash = await objectWrite(testRepo, encoder(task));
@@ -271,7 +271,7 @@ describe('executions', () => {
                 commandIr: commandIrHash,
                 inputs: [[variant('field', 'test')]],
                 output: [variant('field', 'output')],
-                kind: variant('none', null), metadata: variant('none', null),
+                kind: variant('none', null), metadata: variant('none', null), runner: variant('custom', { command: [] }),
             };
             const encoder = encodeBeast2For(TaskObjectType);
             const taskHash = await objectWrite(testRepo, encoder(task));
@@ -301,7 +301,7 @@ describe('executions', () => {
                 commandIr: commandIrHash,
                 inputs: [[variant('field', 'test')]],
                 output: [variant('field', 'output')],
-                kind: variant('none', null), metadata: variant('none', null),
+                kind: variant('none', null), metadata: variant('none', null), runner: variant('custom', { command: [] }),
             };
             const encoder = encodeBeast2For(TaskObjectType);
             const taskHash = await objectWrite(testRepo, encoder(task));
@@ -331,7 +331,7 @@ describe('executions', () => {
                 commandIr: commandIrHash,
                 inputs: [[variant('field', 'test')]],
                 output: [variant('field', 'output')],
-                kind: variant('none', null), metadata: variant('none', null),
+                kind: variant('none', null), metadata: variant('none', null), runner: variant('custom', { command: [] }),
             };
             const encoder = encodeBeast2For(TaskObjectType);
             const taskHash = await objectWrite(testRepo, encoder(task));
@@ -369,7 +369,7 @@ describe('executions', () => {
                 commandIr: commandIrHash,
                 inputs: [],
                 output: [variant('field', 'output')],
-                kind: variant('none', null), metadata: variant('none', null),
+                kind: variant('none', null), metadata: variant('none', null), runner: variant('custom', { command: [] }),
             };
             const encoder = encodeBeast2For(TaskObjectType);
             const taskHash = await objectWrite(testRepo, encoder(task));

package/dist/src/executions.spec.js.map

@@ -1 +1 @@
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package/dist/src/gc.spec.js

@@ -9,12 +9,12 @@ import { describe, it, beforeEach, afterEach } from 'node:test';
 import assert from 'node:assert';
 import { existsSync, writeFileSync, mkdirSync } from 'node:fs';
 import { join, dirname } from 'node:path';
-import { StringType, StructType, encodeBeast2For, variant } from '@elaraai/east';
+import { East, IntegerType, StringType, StructType, decodeBeast2For, encodeBeast2For, variant } from '@elaraai/east';
 import e3 from '@elaraai/e3';
-import { WorkspaceStateType, PackageObjectType, TaskObjectType, DataRefType, DatasetRefType } from '@elaraai/e3-types';
+import { WorkspaceStateType, PackageObjectType, TaskObjectType, FunctionObjectType, DataRefType, DatasetRefType } from '@elaraai/e3-types';
 import { repoGc, collectAllRoots, markReachable, sweepBatch } from './storage/local/gc.js';
 import { objectWrite, objectRead } from './storage/local/LocalObjectStore.js';
-import { packageImport, packageRemove } from './packages.js';
+import { packageImport, packageRemove, packageRead } from './packages.js';
 import { ObjectNotFoundError } from './errors.js';
 import { createTestRepo, removeTestRepo, createTempDir, removeTempDir } from './test-helpers.js';
 import { LocalStorage } from './storage/local/index.js';
@@ -117,6 +117,36 @@ describe('gc', () => {
             assert.ok(result.retainedObjects >= 1);
         });
     });
+    describe('with function objects', () => {
+        it('function bodies survive gc (PackageObject -> FunctionObject -> bodyIr)', async () => {
+            // Deploy a package containing a function, gc, then verify the
+            // FunctionObject and its bodyIr object are retained and decodable.
+            const double = e3.function('double', East.function([IntegerType], IntegerType, ($, x) => x.multiply(2n)));
+            const pkg = e3.package('fn-gc', '1.0.0', double);
+            const zipPath = join(tempDir, 'fn-gc.zip');
+            await e3.export(pkg, zipPath);
+            await packageImport(storage, testRepoPath, zipPath);
+            const result = await repoGc(storage, testRepoPath, { minAge: 0 });
+            assert.strictEqual(result.deletedObjects, 0);
+            // The function body must still be readable after gc
+            const pkgObject = await packageRead(storage, testRepoPath, 'fn-gc', '1.0.0');
+            const fnHash = pkgObject.functions.get('double');
+            assert.ok(fnHash, 'functions map lost');
+            const fnObject = decodeBeast2For(FunctionObjectType)(Buffer.from(await objectRead(testRepoPath, fnHash)));
+            const bodyIr = await objectRead(testRepoPath, fnObject.bodyIr);
+            assert.ok(bodyIr.length > 0, 'bodyIr object lost');
+        });
+        it('function objects are deleted once the package is removed', async () => {
+            const double = e3.function('double', East.function([IntegerType], IntegerType, ($, x) => x.multiply(2n)));
+            const pkg = e3.package('fn-gc-rm', '1.0.0', double);
+            const zipPath = join(tempDir, 'fn-gc-rm.zip');
+            await e3.export(pkg, zipPath);
+            const importResult = await packageImport(storage, testRepoPath, zipPath);
+            await packageRemove(storage, testRepoPath, 'fn-gc-rm', '1.0.0');
+            const result = await repoGc(storage, testRepoPath, { minAge: 0 });
+            assert.strictEqual(result.deletedObjects, importResult.objectCount);
+        });
+    });
     describe('with staging files', () => {
         it('deletes orphaned .partial files', async () => {
             // Create a fake .partial staging file
@@ -203,6 +233,7 @@ describe('gc', () => {
                         ['data', variant('value', { hash: hashValue, versions: new Map() })],
                     ]),
                 },
+                functions: new Map(),
             }));
             // Create a package ref pointing to the package
             const refDir = join(testRepoPath, 'packages', 'transitive');
@@ -226,6 +257,7 @@ describe('gc', () => {
                     structure: variant('struct', new Map()),
                     refs: new Map(),
                 },
+                functions: new Map(),
             }));
             // Unreachable orphan object
             const orphanData = new Uint8Array([77, 88, 99]);
@@ -359,7 +391,7 @@ describe('gc', () => {
                 commandIr: irHash,
                 inputs: [[variant('field', 'x')]],
                 output: [variant('field', 'y')],
-                kind: variant('none', null), metadata: variant('none', null),
+                kind: variant('none', null), metadata: variant('none', null), runner: variant('custom', { command: [] }),
             });
             const taskHash = 'b'.repeat(64);
             // Encode a PackageObject referencing the task
@@ -370,6 +402,7 @@ describe('gc', () => {
                     structure: variant('struct', new Map()),
                     refs: new Map(),
                 },
+                functions: new Map(),
             });
             const pkgHash = 'a'.repeat(64);
             const objects = new Map();