@el-j/magic-agent-helix 4.0.0-beta.7 → 4.0.0-beta.8

package/dist/cli.mjs

@@ -1,12 +1,12 @@
 #!/usr/bin/env node
 import * as p from "node:fs";
 import { realpathSync as te, readFileSync as oe } from "node:fs";
-import * as d from "node:path";
+import * as f from "node:path";
 import { resolve as ne, dirname as se, join as ie } from "node:path";
 import { fileURLToPath as U } from "node:url";
 import { Command as re } from "commander";
 import t from "picocolors";
-import { loadUserConfig as O, mergeConfigs as L, PluginRegistry as C, getFormatter as Y, validateInstructions as ae } from "@el-j/magic-helix-core";
+import { loadUserConfig as O, mergeConfigs as M, PluginRegistry as C, getFormatter as K, validateInstructions as ae } from "@el-j/magic-helix-core";
 import W from "inquirer";
 import j from "ora";
 import q from "gradient-string";
@@ -14,13 +14,13 @@ import { glob as ce } from "glob";
 async function le() {
   console.log(t.cyan(`🧹 Cleaning generated instruction files...
 `));
-  const e = j("Loading configuration...").start(), n = O(), s = L(n);
+  const e = j("Loading configuration...").start(), n = O(), s = M(n);
   e.succeed("Configuration loaded.");
-  const r = d.resolve(
+  const a = f.resolve(
     process.cwd(),
     s.outputDirectory
   );
-  if (!p.existsSync(r)) {
+  if (!p.existsSync(a)) {
     console.log(
       t.yellow(
         `⚠️  Output directory ${s.outputDirectory} does not exist. Nothing to clean.`
@@ -28,16 +28,16 @@ async function le() {
     );
     return;
   }
-  const a = p.readdirSync(r).filter((g) => g.endsWith(".md"));
-  if (a.length === 0) {
+  const i = p.readdirSync(a).filter((g) => g.endsWith(".md"));
+  if (i.length === 0) {
     console.log(t.gray("No instruction files found. Nothing to clean."));
     return;
   }
   console.log(
-    t.yellow(`Found ${a.length} instruction file(s) to delete:
+    t.yellow(`Found ${i.length} instruction file(s) to delete:
 `)
   );
-  for (const g of a)
+  for (const g of i)
     console.log(t.gray(`  - ${g}`));
   console.log();
   const { confirm: o } = await W.prompt([
@@ -45,7 +45,7 @@ async function le() {
       type: "confirm",
       name: "confirm",
       message: t.red(
-        `Are you sure you want to delete all ${a.length} file(s)?`
+        `Are you sure you want to delete all ${i.length} file(s)?`
       ),
       default: !1
     }
@@ -54,21 +54,21 @@ async function le() {
     console.log(t.yellow("Clean cancelled."));
     return;
   }
-  const c = j("Deleting files...").start();
-  let i = 0, l = 0;
-  for (const g of a)
+  const r = j("Deleting files...").start();
+  let c = 0, l = 0;
+  for (const g of i)
     try {
-      p.unlinkSync(d.join(r, g)), i++;
+      p.unlinkSync(f.join(a, g)), c++;
     } catch (u) {
       console.error(
         t.red(`  ❌ Error deleting ${g}: ${u.message}`)
       ), l++;
     }
-  l === 0 ? c.succeed(
-    t.green(`✅ Successfully deleted ${i} file(s).`)
-  ) : c.warn(
+  l === 0 ? r.succeed(
+    t.green(`✅ Successfully deleted ${c} file(s).`)
+  ) : r.warn(
     t.yellow(
-      `⚠️  Deleted ${i} file(s), ${l} error(s) occurred.`
+      `⚠️  Deleted ${c} file(s), ${l} error(s) occurred.`
     )
   );
 }
@@ -94,10 +94,10 @@ const _ = "magic-helix.config.json", I = "ai_templates", ge = {
 async function ue() {
   const e = j(
     t.bold("Initializing Magic Helix for custom rules...")
-  ).start(), n = d.resolve(process.cwd(), _), s = d.resolve(process.cwd(), I);
+  ).start(), n = f.resolve(process.cwd(), _), s = f.resolve(process.cwd(), I);
   if (p.existsSync(n)) {
     e.stop();
-    const { overwrite: a } = await W.prompt([
+    const { overwrite: i } = await W.prompt([
       {
         type: "confirm",
         name: "overwrite",
@@ -105,7 +105,7 @@ async function ue() {
         default: !1
       }
     ]);
-    if (!a) {
+    if (!i) {
       e.warn(t.yellow("Operation cancelled."));
       return;
     }
@@ -119,18 +119,18 @@ async function ue() {
     ), e.succeed(
       t.green(`Created minimal config file: ${t.bold(_)}`)
     );
-  } catch (a) {
-    e.fail(t.red(`Error writing config file: ${a.message}`));
+  } catch (i) {
+    e.fail(t.red(`Error writing config file: ${i.message}`));
     return;
   }
   e.start("Creating templates directory..."), p.existsSync(s) || p.mkdirSync(s, { recursive: !0 });
-  const r = d.resolve(s, "my-custom-rule.md");
-  p.existsSync(r) ? e.succeed(
+  const a = f.resolve(s, "my-custom-rule.md");
+  p.existsSync(a) ? e.succeed(
     t.green(
       `Templates directory ${t.bold(I)} already exists.`
     )
   ) : (p.writeFileSync(
-    r,
+    a,
     `# My Team's Custom Rule
 - This rule is specific to our "domain-my-rules" tag.
 - ALWAYS follow this important pattern.
@@ -157,20 +157,20 @@ Next steps:`)), console.log(
 async function de() {
   console.log(t.cyan(`📋 Listing project information...
 `));
-  const e = j("Loading configuration...").start(), n = O(), s = L(n);
+  const e = j("Loading configuration...").start(), n = O(), s = M(n);
   e.succeed("Configuration loaded.");
-  const { dependencyTagMap: r, configFileTagMap: a, fileGlobTagMap: o, tagTemplateMap: c } = s, i = j("Scanning for projects...").start(), l = await fe();
+  const { dependencyTagMap: a, configFileTagMap: i, fileGlobTagMap: o, tagTemplateMap: r } = s, c = j("Scanning for projects...").start(), l = await fe();
   if (l.length === 0) {
-    i.warn(t.yellow("No projects found."));
+    c.warn(t.yellow("No projects found."));
     return;
   }
-  i.succeed(`Found ${l.length} projects.`);
+  c.succeed(`Found ${l.length} projects.`);
   const g = j("Analyzing projects...").start();
   for (const u of l)
     await pe(
       u,
-      r,
       a,
+      i,
       o
     );
   g.succeed(`Analysis complete.
@@ -183,7 +183,7 @@ async function de() {
       console.log(t.green(`   Tags: ${[...u.tags].join(", ")}`));
       const h = [];
       for (const w of u.tags) {
-        const m = c[w];
+        const m = r[w];
         if (m)
           for (const v of m)
             h.push(`${u.name}.${v.suffix}`);
@@ -198,25 +198,25 @@ async function de() {
 async function fe() {
   const e = [], n = process.cwd(), s = C.getInstance();
   await s.initialize();
-  const a = (await s.detectAllProjects(n)).map((o) => o.metadata);
-  if (a.length === 0)
+  const i = (await s.detectAllProjects(n)).map((o) => o.metadata);
+  if (i.length === 0)
     return [];
-  for (const o of a) {
-    const c = d.relative(n, o.projectPath);
+  for (const o of i) {
+    const r = f.relative(n, o.projectPath);
     e.push({
-      name: o.name || d.basename(o.projectPath),
-      path: c || ".",
+      name: o.name || f.basename(o.projectPath),
+      path: r || ".",
       tags: /* @__PURE__ */ new Set()
     });
   }
   return e;
 }
-async function pe(e, n, s, r) {
-  const a = d.resolve(process.cwd(), e.path);
+async function pe(e, n, s, a) {
+  const i = f.resolve(process.cwd(), e.path);
   try {
-    const i = (await C.getInstance().detectAllProjects(a)).map((l) => l.metadata);
-    if (i.length > 0) {
-      const l = i[0];
+    const c = (await C.getInstance().detectAllProjects(i)).map((l) => l.metadata);
+    if (c.length > 0) {
+      const l = c[0];
       if (l.tags?.length)
         for (const g of l.tags)
           e.tags.add(g);
@@ -230,20 +230,20 @@ async function pe(e, n, s, r) {
   }
   try {
     for (const o in s) {
-      const c = s[o], i = d.join(a, o);
-      p.existsSync(i) && e.tags.add(c);
+      const r = s[o], c = f.join(i, o);
+      p.existsSync(c) && e.tags.add(r);
     }
   } catch {
   }
   try {
     const { glob: o } = await import("glob");
-    for (const c in r) {
-      const i = r[c];
-      (await o(c, {
-        cwd: a,
+    for (const r in a) {
+      const c = a[r];
+      (await o(r, {
+        cwd: i,
         nodir: !0,
         dot: !0
-      })).length > 0 && e.tags.add(i);
+      })).length > 0 && e.tags.add(c);
     }
   } catch {
   }
@@ -253,22 +253,22 @@ async function me(e = {}) {
   try {
     const n = C.getInstance();
     await n.initialize({ verbose: e.verbose });
-    const s = await n.getAllPlugins(), r = n.getStatistics();
+    const s = await n.getAllPlugins(), a = n.getStatistics();
     if (s.length === 0) {
       console.log(t.yellow("⚠️  No plugins loaded"));
       return;
     }
     console.log(t.green(`✅ ${s.length} plugin(s) loaded successfully`)), console.log();
-    const a = s.sort((o, c) => c.priority - o.priority);
+    const i = s.sort((o, r) => r.priority - o.priority);
     console.log(t.bold("Available Language Plugins:")), console.log("──────────────────────────────");
-    for (const o of a) {
-      const c = o.priority >= 90 ? "green" : o.priority >= 70 ? "yellow" : "cyan";
+    for (const o of i) {
+      const r = o.priority >= 90 ? "green" : o.priority >= 70 ? "yellow" : "cyan";
       if (console.log(
-        `${t.bold(o.displayName)} (${t[c](`priority: ${o.priority}`)}) v${o.version}`
+        `${t.bold(o.displayName)} (${t[r](`priority: ${o.priority}`)}) v${o.version}`
       ), e.verbose) {
-        const i = o.getTemplates();
-        i.length > 0 && console.log(
-          `  📝 Templates: ${i.map((g) => g.name).join(", ")}`
+        const c = o.getTemplates();
+        c.length > 0 && console.log(
+          `  📝 Templates: ${c.map((g) => g.name).join(", ")}`
         );
         const l = o.getDependencyTagMap?.();
         l && Object.keys(l).length > 0 && console.log(
@@ -276,11 +276,11 @@ async function me(e = {}) {
         ), console.log();
       }
     }
-    if (e.verbose || (console.log(), console.log(t.dim("💡 Use --verbose for detailed plugin information"))), console.log(), console.log(t.bold("System Statistics:")), console.log("──────────────────"), console.log(`📊 Total plugins: ${r.totalLoaded}`), console.log(`⚡ Average load time: ${r.averageLoadTime.toFixed(1)}ms`), console.log(`❌ Load errors: ${r.totalErrors}`), r.totalErrors > 0 && e.verbose) {
+    if (e.verbose || (console.log(), console.log(t.dim("💡 Use --verbose for detailed plugin information"))), console.log(), console.log(t.bold("System Statistics:")), console.log("──────────────────"), console.log(`📊 Total plugins: ${a.totalLoaded}`), console.log(`⚡ Average load time: ${a.averageLoadTime.toFixed(1)}ms`), console.log(`❌ Load errors: ${a.totalErrors}`), a.totalErrors > 0 && e.verbose) {
       const o = n.getLoadErrors();
       console.log(), console.log(t.red("Load Errors:")), console.log("────────────");
-      for (const c of o)
-        console.log(`❌ ${c.source.identifier}: ${c.error.message}`);
+      for (const r of o)
+        console.log(`❌ ${r.source.identifier}: ${r.error.message}`);
     }
   } catch (n) {
     console.error(
@@ -432,21 +432,21 @@ const ye = {
 function he(e) {
   return ye[e]?.extensions || [];
 }
-function K(e, n, s) {
-  const r = /* @__PURE__ */ new Set();
-  for (const c of n) {
-    const i = he(c);
-    for (const l of i)
-      r.add(l);
+function Y(e, n, s) {
+  const a = /* @__PURE__ */ new Set();
+  for (const r of n) {
+    const c = he(r);
+    for (const l of c)
+      a.add(l);
   }
-  if (r.size === 0)
+  if (a.size === 0)
     return `${e}/src/**/*.{ts,js,vue,tsx,jsx}`;
-  const a = Array.from(r).join(",");
-  let o = `${e}/src/**/*.{${a}}`;
+  const i = Array.from(a).join(",");
+  let o = `${e}/src/**/*.{${i}}`;
   if (s) {
-    const c = s.split(",").map((i) => i.trim());
-    for (const i of c)
-      i.endsWith("/**") ? o += ` !(${e}/src/${i})` : i.includes("*") ? o += ` !(${e}/src/${i})` : o += ` !(${e}/src/${i})`;
+    const r = s.split(",").map((c) => c.trim());
+    for (const c of r)
+      c.endsWith("/**") ? o += ` !(${e}/src/${c})` : c.includes("*") ? o += ` !(${e}/src/${c})` : o += ` !(${e}/src/${c})`;
   }
   return o;
 }
@@ -458,19 +458,19 @@ function $(e, n) {
 }
 async function we(e = {}) {
   Q(e);
-  const n = j("Loading configurations...").start(), s = O(e.config), r = L(s);
-  e.target && (r.target = e.target), n.succeed("Configuration loaded.");
-  const { dependencyTagMap: a, configFileTagMap: o, fileGlobTagMap: c, tagTemplateMap: i } = r, l = d.resolve(
+  const n = j("Loading configurations...").start(), s = O(e.config), a = M(s);
+  e.target && (a.target = e.target), n.succeed("Configuration loaded.");
+  const { dependencyTagMap: i, configFileTagMap: o, fileGlobTagMap: r, tagTemplateMap: c } = a, l = f.resolve(
     process.cwd(),
-    r.templateDirectory
-  ), g = d.resolve(
+    a.templateDirectory
+  ), g = f.resolve(
     process.cwd(),
-    r.outputDirectory
-  ), u = Y(r.target);
+    a.outputDirectory
+  ), u = K(a.target);
   if (!p.existsSync(g)) {
     console.log(
       t.yellow(
-        `⚠️  Output directory ${r.outputDirectory} does not exist.`
+        `⚠️  Output directory ${a.outputDirectory} does not exist.`
       )
     ), console.log(
       t.gray("   Run 'magic-helix run' first to generate instruction files.")
@@ -492,13 +492,13 @@ async function we(e = {}) {
   for (const y of w)
     await je(
       y,
-      a,
+      i,
       o,
-      c
+      r
     ), v += y.tags.size;
   m.succeed(`Project analysis complete. Found ${v} tags.`), console.log(
     t.cyan(`
-Refreshing instruction files in ${r.outputDirectory}...`)
+Refreshing instruction files in ${a.outputDirectory}...`)
   );
   let D = 0, N = 0;
   for (const y of w) {
@@ -507,25 +507,25 @@ Refreshing instruction files in ${r.outputDirectory}...`)
       continue;
     }
     console.log(t.bold(`  Processing: ${y.name}`)), console.log(t.gray(`    Tags: ${[...y.tags].join(", ")}`));
-    const z = K(y.path, y.tags);
+    const z = Y(y.path, y.tags);
     for (const S of y.tags) {
-      const M = i[S];
-      if (M)
-        for (const P of M) {
-          const T = `${y.name}.${P.suffix}`, F = d.join(g, T);
+      const L = c[S];
+      if (L)
+        for (const P of L) {
+          const T = `${y.name}.${P.suffix}`, F = f.join(g, T);
           if (!p.existsSync(F)) {
             console.log(
               t.yellow(`    ⚠️  File not found, skipping: ${T}`)
             );
             continue;
           }
-          const f = xe(l, P.template), x = "Custom";
-          if (!f) {
+          const d = xe(l, P.template), x = "Custom";
+          if (!d) {
             console.warn(t.yellow(`    ⚠️  Template not found: ${P.template}`));
             continue;
           }
           const R = u.getFrontmatter(z, y.name), k = u.format(
-            f,
+            d,
             z,
             y.name
           ), b = `${R}
@@ -544,25 +544,25 @@ ${k}`;
 async function $e() {
   const e = [], n = process.cwd(), s = C.getInstance();
   await s.initialize();
-  const a = (await s.detectAllProjects(n)).map((o) => o.metadata);
-  if (a.length === 0)
+  const i = (await s.detectAllProjects(n)).map((o) => o.metadata);
+  if (i.length === 0)
     return [];
-  for (const o of a) {
-    const c = d.relative(n, o.projectPath);
+  for (const o of i) {
+    const r = f.relative(n, o.projectPath);
     e.push({
-      name: o.name || d.basename(o.projectPath),
-      path: c || ".",
+      name: o.name || f.basename(o.projectPath),
+      path: r || ".",
       tags: /* @__PURE__ */ new Set()
     });
   }
   return e;
 }
-async function je(e, n, s, r) {
-  const a = d.resolve(process.cwd(), e.path);
+async function je(e, n, s, a) {
+  const i = f.resolve(process.cwd(), e.path);
   try {
-    const i = (await C.getInstance().detectAllProjects(a)).map((l) => l.metadata);
-    if (i.length > 0) {
-      const l = i[0];
+    const c = (await C.getInstance().detectAllProjects(i)).map((l) => l.metadata);
+    if (c.length > 0) {
+      const l = c[0];
       if (l.tags?.length)
         for (const g of l.tags)
           e.tags.add(g);
@@ -581,8 +581,8 @@ async function je(e, n, s, r) {
   }
   try {
     for (const o in s) {
-      const c = s[o], i = d.join(a, o);
-      p.existsSync(i) && e.tags.add(c);
+      const r = s[o], c = f.join(i, o);
+      p.existsSync(c) && e.tags.add(r);
     }
   } catch (o) {
     console.warn(
@@ -593,13 +593,13 @@ async function je(e, n, s, r) {
   }
   try {
     const { glob: o } = await import("glob");
-    for (const c in r) {
-      const i = r[c];
-      (await o(c, {
-        cwd: a,
+    for (const r in a) {
+      const c = a[r];
+      (await o(r, {
+        cwd: i,
         nodir: !0,
         dot: !0
-      })).length > 0 && e.tags.add(i);
+      })).length > 0 && e.tags.add(c);
     }
   } catch (o) {
     console.warn(
@@ -610,7 +610,7 @@ async function je(e, n, s, r) {
   }
 }
 function xe(e, n) {
-  const s = d.join(e, n);
+  const s = f.join(e, n);
   try {
     return p.readFileSync(s, "utf-8");
   } catch {
@@ -682,15 +682,15 @@ async function J(e = {}) {
     q.pastel.multiline("🤖 Running AI Convention Aligner...")
   ), n.dryRun && $("normal", s) && console.log(t.yellow(`🔍 DRY RUN MODE - No files will be written
 `));
-  const r = j("Loading configurations...").start(), a = O(n.config), o = L(a);
-  n.outputDir && (o.outputDirectory = n.outputDir), n.target && (o.target = n.target), r.succeed("Configuration loaded.");
-  const { dependencyTagMap: c, configFileTagMap: i, fileGlobTagMap: l, tagTemplateMap: g } = o, u = d.resolve(
+  const a = j("Loading configurations...").start(), i = O(n.config), o = M(i);
+  n.outputDir && (o.outputDirectory = n.outputDir), n.target && (o.target = n.target), a.succeed("Configuration loaded.");
+  const { dependencyTagMap: r, configFileTagMap: c, fileGlobTagMap: l, tagTemplateMap: g } = o, u = f.resolve(
     process.cwd(),
     o.templateDirectory
-  ), h = d.resolve(
+  ), h = f.resolve(
     process.cwd(),
     o.outputDirectory
-  ), w = Y(o.target), m = j("Scanning for projects...").start(), v = await Pe();
+  ), w = K(o.target), m = j("Scanning for projects...").start(), v = await Pe();
   if (v.length === 0) {
     m.warn(
       t.yellow(
@@ -715,25 +715,25 @@ Supported project types: Node.js, Python, Go, Rust, Java, Ruby, PHP, C#, Swift,
   m.succeed(`Found ${v.length} projects.`);
   const D = j("Analyzing project tags...").start();
   let N = 0;
-  for (const f of v) {
-    if (n.project && f.name !== n.project) {
-      $("verbose", s) && console.log(t.gray(`Skipping ${f.name} (not target project)`));
+  for (const d of v) {
+    if (n.project && d.name !== n.project) {
+      $("verbose", s) && console.log(t.gray(`Skipping ${d.name} (not target project)`));
       continue;
     }
     await Te(
-      f,
+      d,
+      r,
       c,
-      i,
       l
-    ), N += f.tags.size;
+    ), N += d.tags.size;
   }
   D.succeed(`Project analysis complete. Found ${N} tags.`), n.dryRun ? $("verbose", s) && console.log(t.gray(`Would ensure directory: ${h}`)) : be(h);
   let y = g;
   if (n.template) {
-    const f = n.template.split(",").map((x) => x.trim());
+    const d = n.template.split(",").map((x) => x.trim());
     y = {};
     for (const [x, R] of Object.entries(g)) {
-      const k = R.filter((b) => f.some((A) => {
+      const k = R.filter((b) => d.some((A) => {
         if (A.includes("*")) {
           const E = new RegExp(A.replace(/\*/g, ".*"));
           return E.test(b.template) || E.test(x);
@@ -747,13 +747,13 @@ Supported project types: Node.js, Python, Go, Rust, Java, Ruby, PHP, C#, Swift,
     );
   }
   const z = await Se(), S = {};
-  for (const [f, x] of Object.entries(y))
-    S[f] = x.map((R) => ({
+  for (const [d, x] of Object.entries(y))
+    S[d] = x.map((R) => ({
       template: R.template,
       suffix: R.suffix
     }));
-  for (const [f, x] of Object.entries(z))
-    S[f] || (S[f] = []), S[f].push(...x);
+  for (const [d, x] of Object.entries(z))
+    S[d] || (S[d] = []), S[d].push(...x);
   $("verbose", s) && (console.log(t.gray(`
 --- Template Map Debug ---`)), console.log(
     t.gray(
@@ -777,22 +777,22 @@ Supported project types: Node.js, Python, Go, Rust, Java, Ruby, PHP, C#, Swift,
     t.cyan(`
 Generating instruction files in ${o.outputDirectory}...`)
   );
-  const M = j("Generating instruction files...").start(), P = [];
+  const L = j("Generating instruction files...").start(), P = [];
   let T = 0, F = 0;
-  for (const f of v) {
-    if (n.project && f.name !== n.project)
+  for (const d of v) {
+    if (n.project && d.name !== n.project)
       continue;
-    if (f.tags.size === 0) {
-      $("normal", s) && console.log(t.gray(`  Skipping: ${f.name} (No matching tags)`));
+    if (d.tags.size === 0) {
+      $("normal", s) && console.log(t.gray(`  Skipping: ${d.name} (No matching tags)`));
       continue;
     }
-    T++, $("normal", s) && console.log(t.bold(`  Processing: ${f.name}`)), $("verbose", s) && console.log(t.gray(`    Tags: ${[...f.tags].join(", ")}`));
-    const x = K(
-      f.path,
-      f.tags,
+    T++, $("normal", s) && console.log(t.bold(`  Processing: ${d.name}`)), $("verbose", s) && console.log(t.gray(`    Tags: ${[...d.tags].join(", ")}`));
+    const x = Y(
+      d.path,
+      d.tags,
       n.exclude
     );
-    for (const R of f.tags) {
+    for (const R of d.tags) {
       const k = S[R];
       if (k)
         for (const b of k) {
@@ -802,12 +802,12 @@ Generating instruction files in ${o.outputDirectory}...`)
             console.warn(t.yellow(`    ⚠️  Template not found: ${b.template}`));
             continue;
           }
-          const B = w.getFrontmatter(x, f.name), X = w.format(
+          const B = w.getFrontmatter(x, d.name), X = w.format(
             A,
             x,
-            f.name
+            d.name
           ), Z = `${B}
-${X}`, G = b.suffix, ee = d.join(h, G);
+${X}`, G = `${v.length > 1 ? `${d.name.replace(/[@/]/g, "-")}.` : ""}${b.suffix}`, ee = f.join(h, G);
           P.push(G), n.dryRun ? $("normal", s) && console.log(
             t.cyan(
               `    📝 Would generate: ${t.bold(G)} (from ${E})`
@@ -820,7 +820,7 @@ ${X}`, G = b.suffix, ee = d.join(h, G);
         }
     }
   }
-  M.succeed(
+  L.succeed(
     `Generated ${P.length} files from ${F} templates across ${T} projects`
   ), !n.dryRun && !n.skipPruning ? await Fe(h, P, n.force) : n.dryRun && $("verbose", s) && console.log(t.gray(`
 Would check for old files to prune...`)), $("normal", s) && (console.log(`
@@ -877,9 +877,9 @@ async function Se() {
   let n = [];
   try {
     n = await e.getAllPlugins();
-  } catch (r) {
+  } catch (a) {
     console.warn(
-      t.yellow(`⚠️  Failed to get plugins: ${r.message}`)
+      t.yellow(`⚠️  Failed to get plugins: ${a.message}`)
     ), console.warn(
       t.yellow(
         `⚠️  Registry type: ${typeof e}, has getAllPlugins: ${typeof e?.getAllPlugins}`
@@ -888,35 +888,35 @@ async function Se() {
   }
   n.length === 0 && console.warn(t.yellow("⚠️  No plugins loaded from registry!"));
   const s = {};
-  for (const r of n) {
-    let a = [];
+  for (const a of n) {
+    let i = [];
     try {
-      const o = await r.getTemplates();
-      a = Array.isArray(o) ? o : [];
+      const o = await a.getTemplates();
+      i = Array.isArray(o) ? o : [];
     } catch (o) {
       console.warn(
         t.yellow(
-          `⚠️  Plugin ${r.name} getTemplates failed: ${o.message}`
+          `⚠️  Plugin ${a.name} getTemplates failed: ${o.message}`
         )
       );
       continue;
     }
-    for (const o of a) {
-      const i = `${o.name.replace(/^lang-/, "").replace(/-core$/, "")}.instructions.md`;
+    for (const o of i) {
+      const c = `${o.name.replace(/^lang-/, "").replace(/-core$/, "")}.instructions.md`;
       let l = null;
       try {
         l = typeof o.content == "function" ? await o.content() : o.content;
       } catch (g) {
         console.warn(
           t.yellow(
-            `⚠️  Plugin ${r.name} template ${o.name} failed to load: ${g.message}`
+            `⚠️  Plugin ${a.name} template ${o.name} failed to load: ${g.message}`
           )
         );
       }
       for (const g of o.tags)
         s[g] || (s[g] = []), s[g].push({
-          template: `plugin:${r.name}/${o.name}`,
-          suffix: i,
+          template: `plugin:${a.name}/${o.name}`,
+          suffix: c,
           inlineContent: l ?? void 0
         });
     }
@@ -925,39 +925,51 @@ async function Se() {
 }
 async function Pe() {
   await H();
-  const e = [], n = process.cwd(), r = await C.getInstance().detectAllProjects(n);
-  if (r.length === 0)
+  const e = process.cwd(), s = await C.getInstance().detectAllProjects(e);
+  if (s.length === 0)
     return [];
-  for (const a of r) {
-    const o = d.relative(n, a.metadata.projectPath);
-    e.push({
+  const a = /* @__PURE__ */ new Map();
+  for (const i of s) {
+    const r = f.relative(e, i.metadata.projectPath) || ".";
+    a.has(r) || a.set(r, {
       name: Ce(
-        a.metadata.name || d.basename(a.metadata.projectPath)
+        i.metadata.name || f.basename(i.metadata.projectPath)
       ),
-      path: o || ".",
-      tags: /* @__PURE__ */ new Set()
+      path: r,
+      tags: /* @__PURE__ */ new Set(),
+      allMetadata: []
     });
+    const c = a.get(r);
+    if (c.allMetadata.push(i.metadata), i.metadata.tags?.length)
+      for (const l of i.metadata.tags)
+        c.tags.add(l);
   }
-  return e;
+  return Array.from(a.values()).map(
+    ({ name: i, path: o, tags: r }) => ({
+      name: i,
+      path: o,
+      tags: r
+    })
+  );
 }
 function Ce(e) {
   let s = e.trim().replace(/^@/, "").replace(/[\\/\s]+/g, "-");
   return s = s.replace(/-+/g, "-"), s;
 }
-async function Te(e, n, s, r) {
+async function Te(e, n, s, a) {
   await H();
-  const a = d.resolve(process.cwd(), e.path);
+  const i = f.resolve(process.cwd(), e.path);
   try {
-    const c = await C.getInstance().detectAllProjects(a);
-    if (c.length > 0) {
-      const i = c[0].metadata;
-      if (i.tags?.length)
-        for (const l of i.tags)
-          e.tags.add(l);
-      for (const l in i.dependencies) {
-        n[l] && e.tags.add(n[l]);
-        const g = l.split(/[@/:]/g).pop();
-        g && n[g] && e.tags.add(n[g]);
+    const r = await C.getInstance().detectAllProjects(i);
+    for (const c of r) {
+      const l = c.metadata;
+      if (l.tags?.length)
+        for (const g of l.tags)
+          e.tags.add(g);
+      for (const g in l.dependencies) {
+        n[g] && e.tags.add(n[g]);
+        const u = g.split(/[@/:]/g).pop();
+        u && n[u] && e.tags.add(n[u]);
       }
     }
   } catch (o) {
@@ -969,8 +981,8 @@ async function Te(e, n, s, r) {
   }
   try {
     for (const o in s) {
-      const c = s[o], i = d.join(a, o);
-      p.existsSync(i) && e.tags.add(c);
+      const r = s[o], c = f.join(i, o);
+      p.existsSync(c) && e.tags.add(r);
     }
   } catch (o) {
     console.warn(
@@ -980,14 +992,14 @@ async function Te(e, n, s, r) {
     );
   }
   try {
-    for (const o in r) {
-      const c = r[o];
+    for (const o in a) {
+      const r = a[o];
       (await ce(o, {
-        cwd: a,
+        cwd: i,
         nodir: !0,
         dot: !0
         // Include dotfiles if needed, though 'src' patterns usually don't
-      })).length > 0 && e.tags.add(c);
+      })).length > 0 && e.tags.add(r);
     }
   } catch (o) {
     console.warn(
@@ -998,7 +1010,7 @@ async function Te(e, n, s, r) {
   }
 }
 function Re(e, n) {
-  const s = d.join(e, n);
+  const s = f.join(e, n);
   try {
     return p.readFileSync(s, "utf-8");
   } catch {
@@ -1006,35 +1018,35 @@ function Re(e, n) {
   }
 }
 async function Fe(e, n, s = !1) {
-  const a = p.readdirSync(e).filter((o) => o.endsWith(".md")).filter((o) => !n.includes(o));
-  if (a.length > 0) {
+  const i = p.readdirSync(e).filter((o) => o.endsWith(".md")).filter((o) => !n.includes(o));
+  if (i.length > 0) {
     console.warn(
       t.yellow(
         `
-⚠️  Found ${a.length} instruction files that are no longer generated:`
+⚠️  Found ${i.length} instruction files that are no longer generated:`
       )
     );
-    for (const c of a)
-      console.warn(t.yellow(`  - ${c}`));
+    for (const r of i)
+      console.warn(t.yellow(`  - ${r}`));
     let o = s;
     if (s || (o = (await W.prompt([
       {
         type: "confirm",
         name: "prune",
-        message: `Do you want to delete these ${a.length} old files?`,
+        message: `Do you want to delete these ${i.length} old files?`,
         default: !1
       }
     ])).prune), o) {
-      let c = 0;
-      for (const i of a)
+      let r = 0;
+      for (const c of i)
         try {
-          p.unlinkSync(d.join(e, i)), c++;
+          p.unlinkSync(f.join(e, c)), r++;
         } catch (l) {
           console.error(
-            t.red(`  ❌ Error deleting ${i}: ${l.message}`)
+            t.red(`  ❌ Error deleting ${c}: ${l.message}`)
           );
         }
-      console.log(`✅ Pruned ${c} old files.`);
+      console.log(`✅ Pruned ${r} old files.`);
     }
   }
 }
@@ -1043,13 +1055,13 @@ async function ke() {
     t.cyan(`🔍 Validating instruction files with quality scoring...
 `)
   );
-  const e = j("Loading configuration...").start(), n = O(), s = L(n);
+  const e = j("Loading configuration...").start(), n = O(), s = M(n);
   e.succeed("Configuration loaded.");
-  const r = d.resolve(
+  const a = f.resolve(
     process.cwd(),
     s.outputDirectory
   );
-  if (!p.existsSync(r)) {
+  if (!p.existsSync(a)) {
     e.fail(
       t.red(
         `❌ Output directory ${s.outputDirectory} does not exist. Run 'magic-helix run' first.`
@@ -1057,14 +1069,14 @@ async function ke() {
     );
     return;
   }
-  const a = p.readdirSync(r).filter((u) => u.endsWith(".md"));
-  if (a.length === 0) {
+  const i = p.readdirSync(a).filter((u) => u.endsWith(".md"));
+  if (i.length === 0) {
     console.log(
       t.yellow("No instruction files found. Run 'magic-helix run' first.")
     );
     return;
   }
-  console.log(t.gray(`Checking ${a.length} instruction file(s)...
+  console.log(t.gray(`Checking ${i.length} instruction file(s)...
 `));
   let o = { track: () => {
   } };
@@ -1076,13 +1088,13 @@ async function ke() {
     }
   } catch {
   }
-  let c = 0, i = 0;
+  let r = 0, c = 0;
   const l = [];
-  for (const u of a) {
-    const h = d.join(r, u);
+  for (const u of i) {
+    const h = f.join(a, u);
     try {
       const w = p.readFileSync(h, "utf-8"), m = ae(w), v = Ae(m.overallScore);
-      l.push({ file: u, score: m.overallScore, grade: v }), m.overallScore >= 70 ? c++ : i++;
+      l.push({ file: u, score: m.overallScore, grade: v }), m.overallScore >= 70 ? r++ : c++;
       const D = m.overallScore >= 90 ? t.green : m.overallScore >= 70 ? t.blue : t.yellow;
       console.log(
         D(`${v} ${m.overallScore}/100`) + t.gray(` - ${u}`)
@@ -1098,24 +1110,24 @@ async function ke() {
         missingCount: m.missingElements.length
       });
     } catch (w) {
-      i++, console.log(t.red(`ERROR - ${u}: ${w.message}`));
+      c++, console.log(t.red(`ERROR - ${u}: ${w.message}`));
     }
   }
   console.log(t.bold(`
 === Validation Summary ===
-`)), console.log(t.green(`✅ Passed (≥70): ${c}`)), console.log(t.red(`❌ Failed (<70): ${i}`));
+`)), console.log(t.green(`✅ Passed (≥70): ${r}`)), console.log(t.red(`❌ Failed (<70): ${c}`));
   const g = l.reduce((u, h) => u + h.score, 0) / l.length;
   console.log(t.cyan(`📊 Average Score: ${Math.round(g)}/100`)), o.track({
     type: "summary",
     files: l.length,
-    pass: c,
-    fail: i,
+    pass: r,
+    fail: c,
     averageScore: Math.round(g)
-  }), i === 0 && g >= 80 ? console.log(t.green(`
-✨ All instruction files meet quality standards!`)) : i > 0 && console.log(
+  }), c === 0 && g >= 80 ? console.log(t.green(`
+✨ All instruction files meet quality standards!`)) : c > 0 && console.log(
     t.yellow(
       `
-⚠️  ${i} file(s) need improvement. Run with --verbose for details.`
+⚠️  ${c} file(s) need improvement. Run with --verbose for details.`
     )
   );
 }