@eigenpal/cli 0.6.5 → 0.6.6

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Files changed (9) hide show
  1. package/CHANGELOG.md +7 -0
  2. package/README.md +2 -4
  3. package/dist/cli.js +26202 -23625
  4. package/dist/skill/SKILL.md +164 -53
  5. package/dist/skill/reference/cli/agents.md +85 -105
  6. package/dist/skill/reference/cli/init.md +1 -20
  7. package/package.json +1 -1
  8. package/dist/skill/reference/cli/run.md +0 -18
  9. package/dist/skill/reference/cli/runs.md +0 -23
package/dist/skill/SKILL.md CHANGED
@@ -36,8 +36,6 @@ For exact flags and defaults, prefer the generated references:
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  - [`reference/cli/workflow.md`](reference/cli/workflow.md)
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  - [`reference/cli/agents.md`](reference/cli/agents.md)
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  - [`reference/cli/git.md`](reference/cli/git.md)
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- - [`reference/cli/run.md`](reference/cli/run.md)
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- - [`reference/cli/runs.md`](reference/cli/runs.md)
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39
 
42
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  ## Pick The Surface
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@@ -112,52 +110,122 @@ a folder unless the user specifically asks for that placement.
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110
 
113
111
  ## Agent Iteration Loop
114
112
 
115
- Git-backed agent source lives in the organization repository under `agents/<slug>/`.
116
- Edit source in Git, save builder work with `eigenpal agents save`, and ship with
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- `eigenpal agents release` + `eigenpal agents sync`. Builder sessions usually work
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- on `builder/<agent>/<session>` branches. This is all Git under the hood, but use
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- the Eigenpal CLI whenever possible:
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-
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- - `eigenpal agents save` = validate changed packages, commit if dirty, and push the current branch.
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- - `eigenpal agents release <version> agents/<slug>` = safely land the package onto the release/tag path. Treat this like the merge step.
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- - `eigenpal agents sync agents.<slug>` = apply the latest released manifest, including triggers, to the server DB.
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- - `eigenpal git -- <args>` = authenticated git passthrough. Use it for every git command, including nuanced/read-only commands (`status`, `diff`, `log`, `rev-parse HEAD`, `merge`) and conflict recovery. Do not call raw `git` directly in normal agent work.
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-
126
- Do not use `eigenpal agents push` or `agents file put` — those targeted the legacy
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- HTTP upload API. Configure triggers in `eigenpal.yaml`; `agents sync` applies the
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- latest release manifest to the DB.
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+ Agents are Git-backed source packages. The server runs released source packages
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+ from the organization source repository; editing live files is not the normal
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+ workflow. Prefer the Eigenpal CLI over raw provider/API calls because it handles
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+ validation, source refs, release tags, and server sync consistently. Cloned
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+ source repos also work with raw Git and IDE source-control panels: `agents clone`
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+ and `eigenpal git -- ...` configure a repo-local credential helper for the
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+ Eigenpal Git remote, so `git status`, `git log`, `git pull`, and `git push`
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+ can authenticate without copying API keys into `.git/config`.
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+
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+ Core mental model:
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+
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+ - `agents/<slug>/` is one agent package.
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+ - `resources/skills/<slug>/`, `resources/knowledge/<slug>/`,
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+ `resources/templates/<slug>/`, and `resources/rules/<slug>/` are shared
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+ packages that agents depend on through `eigenpal.yaml`.
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+ - `eigenpal agents save` validates changed packages, commits if dirty, and
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+ pushes the current branch.
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+ - `eigenpal agents release patch agents/<slug>` lands a package as an immutable
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+ release tag.
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+ - `eigenpal agents sync agents.<slug>` applies the latest released agent
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+ manifest to the server DB, including triggers.
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+ - `@latest` means latest released package, not your current branch.
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+ - To test current branch work before release, run the exact commit SHA from
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+ `eigenpal git -- rev-parse HEAD`.
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+
138
+ Use branches. Do not casually edit `main` unless the user explicitly wants that:
129
139
 
130
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  ```bash
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- # 1. Clone org source and open the agent package.
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+ # 1. Clone org source and create a branch.
132
142
  eigenpal agents clone --out ./source
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- cd source/agents/<slug>
134
- eigenpal agents install
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+ cd ./source
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+ eigenpal git -- switch -c <short-task-branch>
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145
 
136
- # 2. Edit agent source.
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- # AGENT.md is the inference orchestrator. Schemas are plain JSON files.
138
- $EDITOR AGENT.md eigenpal.yaml input-schema.json output-schema.json
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- $EDITOR skills/<skill>/SKILL.md skills/<skill>/run.py
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-
141
- # 3. Validate layout, manifest, and schema files; then save durable source changes on the current branch.
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- cd ../.. # repo root
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+ # 2. Inspect package state.
143
147
  eigenpal agents status
148
+ eigenpal agents show agents.<slug> --json
149
+ eigenpal agents versions agents.<slug> --json
150
+
151
+ # 3. Edit source.
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+ $EDITOR agents/<slug>/AGENT.md
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+ $EDITOR agents/<slug>/eigenpal.yaml
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+ $EDITOR agents/<slug>/input-schema.json agents/<slug>/output-schema.json
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+ $EDITOR agents/<slug>/skills/<skill>/SKILL.md agents/<slug>/skills/<skill>/run.py
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+
157
+ # 4. Validate and save the branch.
144
158
  eigenpal agents validate agents/<slug>
145
- eigenpal agents save -m "Improve invoice extraction prompts"
159
+ eigenpal agents deps --dir agents/<slug>
160
+ eigenpal agents save -m "Improve <agent> behavior"
146
161
 
147
- # 4. Run exactly what was saved.
162
+ # 5. Test the exact saved commit.
148
163
  SOURCE_REF="$(eigenpal git -- rev-parse HEAD)"
149
164
  eigenpal agents run agents.<slug>@"$SOURCE_REF" --input-json '{"text":"hello"}' --wait
150
165
  eigenpal agents run agents.<slug>@"$SOURCE_REF" --example example-name --wait
151
- eigenpal agents runs get <agent-execution-id> --json | jq '.run'
152
- eigenpal agents runs trace <agent-execution-id> --out ./trace.jsonl
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+ eigenpal agents runs get <run-id> --json | jq '.run | {status,schemaValid,error,requestedSourceRef,resolvedGitRef,resolvedGitTag,resolvedCommitSha,cost}'
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+ eigenpal agents runs artifacts list <run-id>
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+ eigenpal agents runs trace <run-id> --out ./review/<run-id>/trace.jsonl
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154
- # 5. Release to main + tag when ready to ship (-m optional; defaults to "Release <packagePath>").
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- # Release tags are immutable — never move, delete, or force-update a published tag.
156
- # If a release is wrong, ship a new patch (`eigenpal agents release patch`).
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+ # 6. Release and sync only when ready.
157
171
  eigenpal agents release patch agents/<slug>
158
172
  eigenpal agents sync agents.<slug>
173
+
174
+ # 7. Verify the released package.
175
+ eigenpal agents run agents.<slug>@latest --example example-name --wait --json
176
+ eigenpal agents runs get <released-run-id> --json | jq '.run | {status,schemaValid,error,resolvedGitTag,resolvedCommitSha,cost}'
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177
  ```
160
178
 
179
+ File inputs must use schema field names when there is more than one file input:
180
+
181
+ ```bash
182
+ eigenpal agents run agents.<slug>@latest \
183
+ --input-file start_info_doc=./ZFRP.docx \
184
+ --wait
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+
186
+ eigenpal agents run agents.<slug>@latest \
187
+ --input-file zfzal_doc=./ZFZAL.pdf \
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+ --input-file lv_doc=./list_vlastnictva.pdf \
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+ --input-json '{"skip_name_check":false}' \
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+ --wait
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+ ```
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+
193
+ There is no live file upload command for Git-backed agents. `agents file list/get/diff`
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+ are read/compare tools only. Source changes go through Git + `agents save` +
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+ `agents release` + `agents sync`.
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+
197
+ ### Shared Resource Rollouts
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+
199
+ When you edit a shared resource, do not assume every dependent agent should move
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+ immediately. Find usage, then ask the user which dependents to bump:
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+
202
+ ```bash
203
+ # 1. Edit and validate the shared package.
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+ $EDITOR resources/skills/<slug>/SKILL.md resources/skills/<slug>/run.py
205
+ eigenpal agents validate resources/skills/<slug>
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+
207
+ # 2. Find dependent agents/resources.
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+ rg '<slug>|resources/skills/<slug>|resources/knowledge/<slug>' agents/ resources/
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+ eigenpal agents deps --dir agents/<dependent-slug>
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+
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+ # 3. Ask the user which dependents should move to the new resource version.
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+
213
+ # 4. Release the shared package.
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+ eigenpal agents save -m "Improve shared <slug>"
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+ eigenpal agents release patch resources/skills/<slug>
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+
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+ # 5. Bump selected agents' eigenpal.yaml dependency refs, then release/sync them.
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+ $EDITOR agents/<dependent-slug>/eigenpal.yaml
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+ eigenpal agents validate agents/<dependent-slug>
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+ eigenpal agents save -m "Bump <slug> dependency"
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+ eigenpal agents release patch agents/<dependent-slug>
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+ eigenpal agents sync agents.<dependent-slug>
223
+ ```
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+
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+ After a shared dependency rollout, run one affected agent and inspect
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+ `eigenpal.lock` via `agents runs artifacts fetch` to confirm the dependency
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+ version and commit that inference actually installed.
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+
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229
  ### Agent Datasets And Examples
162
230
 
163
231
  Agent eval examples are runtime data, not Git source. `eigenpal agents save`
@@ -194,9 +262,11 @@ Run a persisted example with `eigenpal agents run agents.<slug>@<ref> --example
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262
  ```bash
195
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  eigenpal agents runs list agents.<slug> --compact
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264
  eigenpal agents runs list agents.<slug> --status failed --compact
197
- eigenpal agents runs pull <agent-execution-id> --include all --out ./review/<agent-execution-id>
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+ eigenpal agents runs artifacts list <agent-execution-id>
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+ eigenpal agents runs artifacts fetch <agent-execution-id> --include all --out ./review/<agent-execution-id>
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  eigenpal agents runs trace <agent-execution-id> --out ./review/<agent-execution-id>/trace.jsonl
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- eigenpal agents runs rerun <agent-execution-id> --wait
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+ eigenpal agents rerun <agent-execution-id> --wait
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+ eigenpal agents rerun <agent-execution-id> --source-ref original --wait
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  eigenpal agents runs compare <source-agent-execution-id> <new-agent-execution-id> \
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  --baseline \
202
272
  --normalize-dates
@@ -206,13 +276,15 @@ eigenpal agents runs feedback resolve <source-agent-execution-id> \
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276
  ```
207
277
 
208
278
  Agent commands commonly accept `<agent-id-or-slug>`. Agent execution commands
209
- take an agent execution id. Execution pulls and comparisons write review
279
+ take an agent execution id. Artifact fetches and comparisons write review
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  artifacts under `.eigenpal/artifacts/...` by default. Unqualified run-list
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  targets show all source refs; add `@<ref>` only when you want a specific
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  release, branch, tag, semver range, or commit. `runs list --json` returns
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283
  `{ runs, total, limit, offset }`; `runs get --json` returns `{ run }`.
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284
 
215
- Root `eigenpal run` / `eigenpal runs` and `eigenpal git <cmd>` (for moved subcommands) exit with a deprecation message — use `agents run`, `agents runs list`, and `agents <cmd>` instead.
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+ `agents rerun <run-id>` reuses the previous input snapshot with `latest` source
286
+ by default. Use `--source-ref original` only when you need to reproduce the
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+ previous resolved version exactly.
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288
 
217
289
  Use source refs such as `latest`, `main`, exact versions/tags (`1.2.3`),
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290
  semver ranges (`1.2.x`, `1.x`), or exact commit SHAs when you need provenance.
@@ -304,20 +376,26 @@ both batches must belong to the same workflow.
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305
377
  ## Agent Recipes
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378
 
307
- ### Inspect And Edit Agent Files
379
+ ### Inspect Agent Source And Live Files
308
380
 
309
381
  ```bash
310
382
  eigenpal agents list
383
+ eigenpal agents show agents.<slug> --json
384
+ eigenpal agents versions agents.<slug> --json
385
+ eigenpal agents clone --out ./source
386
+ cd ./source
387
+ eigenpal agents status
388
+ eigenpal agents deps --dir agents/<slug>
389
+
390
+ # Live file inspection only. Do not edit through this surface.
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391
  eigenpal agents file list <agent-id-or-slug>
312
- eigenpal agents file list <agent-id-or-slug> --prefix agent/knowledge
392
+ eigenpal agents file list <agent-id-or-slug> --path agent/knowledge
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393
  eigenpal agents file get <agent-id-or-slug> agent/instructions.md --out instructions.md
314
394
  eigenpal agents file diff <agent-id-or-slug> agent/instructions.md instructions.md
315
- eigenpal agents file put <agent-id-or-slug> agent/instructions.md instructions.md --preview
316
- eigenpal agents file put <agent-id-or-slug> agent/instructions.md instructions.md
317
395
  ```
318
396
 
319
- Use `--preview` before writing substantial changes; it shows how the target file
320
- would change.
397
+ Edit `agents/<slug>/...` in Git source, then `agents save`, `agents release`,
398
+ and `agents sync`. Live file commands are read/compare tools.
321
399
 
322
400
  ### Inspect Agent Executions
323
401
 
@@ -325,8 +403,8 @@ would change.
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403
  eigenpal agents runs list <agent-id-or-slug> --status failed --limit 10
326
404
  eigenpal agents runs list <agent-id-or-slug> --feedback-rating fail --include feedback,expected
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  eigenpal agents runs get <agent-execution-id> --include feedback,expected,files,trace,issues --json | jq '.run'
328
- eigenpal agents runs pull <agent-execution-id> --include all
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406
  eigenpal agents runs artifacts list <agent-execution-id>
407
+ eigenpal agents runs artifacts fetch <agent-execution-id> --include all --out ./review/<agent-execution-id>
330
408
  ```
331
409
 
332
410
  Use `--compact` on execution lists when you only need triage rows.
@@ -365,7 +443,8 @@ used when comparing future runs.
365
443
  ### Rerun And Compare Agent Executions
366
444
 
367
445
  ```bash
368
- eigenpal agents runs rerun <agent-execution-id> --wait
446
+ eigenpal agents rerun <agent-execution-id> --wait
447
+ eigenpal agents rerun <agent-execution-id> --source-ref original --wait
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448
  eigenpal agents runs compare <source-agent-execution-id> <new-agent-execution-id>
370
449
  eigenpal agents runs compare <source-agent-execution-id> <new-agent-execution-id> \
371
450
  --baseline \
@@ -375,6 +454,8 @@ eigenpal agents runs compare <source-agent-execution-id> <new-agent-execution-id
375
454
 
376
455
  By default, compare a new output against the reference execution's expected
377
456
  artifacts. Use `--baseline` to compare actual outputs from both executions.
457
+ By default, rerun uses the previous inputs with latest source. Use
458
+ `--source-ref original` for provenance reproduction.
378
459
 
379
460
  ## Output And Exit Codes
380
461
 
@@ -413,8 +494,6 @@ CLI command references:
413
494
 
414
495
  - [`reference/cli/workflow.md`](reference/cli/workflow.md)
415
496
  - [`reference/cli/agents.md`](reference/cli/agents.md)
416
- - [`reference/cli/run.md`](reference/cli/run.md)
417
- - [`reference/cli/runs.md`](reference/cli/runs.md)
418
497
  - [`reference/cli/auth.md`](reference/cli/auth.md)
419
498
  - [`reference/cli/status.md`](reference/cli/status.md)
420
499
 
@@ -445,18 +524,50 @@ eigenpal
445
524
  │ ├── step-type
446
525
  │ └── evaluator-type
447
526
  ├── agents
527
+ │ ├── run
528
+ │ ├── rerun
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529
  │ ├── list
449
- │ ├── push
450
- │ ├── pull
451
530
  │ ├── validate
531
+ │ ├── clone
532
+ │ ├── install
533
+ │ ├── init
534
+ │ ├── pull
535
+ │ ├── commit
536
+ │ ├── save
537
+ │ ├── push
538
+ │ ├── release
539
+ │ ├── sync
540
+ │ ├── status
541
+ │ ├── deps
542
+ │ ├── clean
543
+ │ ├── doctor
544
+ │ ├── show
545
+ │ ├── versions
546
+ │ ├── secret
547
+ │ ├── env
452
548
  │ ├── file
453
- │ ├── trigger
454
- │ ├── execution
549
+ │ ├── dataset
550
+ │ ├── runs
455
551
  │ └── experiment
456
- ├── run
457
- ├── runs
552
+ │ └── session
458
553
  └── skill
459
554
  ├── install
460
555
  ├── uninstall
461
556
  └── list
462
557
  ```
558
+
559
+ Agent command roles:
560
+
561
+ - `agents clone` — clone organization source and configure raw Git/IDE auth.
562
+ - `agents pull` — fast-forward source from `origin/main`; not datasets or run artifacts.
563
+ - `agents status` / `agents doctor` / `agents clean` — inspect source health.
564
+ - `agents validate` / `agents deps` — validate one package and inspect workspace dependencies.
565
+ - `agents save` — validate, commit if dirty, and push the current branch.
566
+ - `agents release` — create immutable package release tags.
567
+ - `agents sync` — apply latest released agent manifest/triggers to the server.
568
+ - `agents run` — start a run from a source ref (`@latest`, version, branch, commit).
569
+ - `agents rerun` — reuse a previous input snapshot; defaults to latest source.
570
+ - `agents runs list/get/watch/cancel/compare/trace` — inspect and manage executions.
571
+ - `agents runs artifacts list/fetch` — inventory and download run artifacts by path.
572
+ - `agents dataset` — manage persisted agent examples; runtime data, not Git source.
573
+ - `agents file` — live read/diff inspection only.
package/dist/skill/reference/cli/agents.md CHANGED
@@ -17,6 +17,7 @@ Manage Eigenpal agents: Git source, datasets, runs, experiments, sessions, and r
17
17
  - [Secrets](#secrets)
18
18
  - [Details](#details)
19
19
  - [`eigenpal agents|agent run [options] <target>`](#eigenpal-agentsagent-run-options-target)
20
+ - [`eigenpal agents|agent rerun [options] <run-id>`](#eigenpal-agentsagent-rerun-options-run-id)
20
21
  - [`eigenpal agents|agent list|ls [options]`](#eigenpal-agentsagent-listls-options)
21
22
  - [`eigenpal agents|agent validate [options] [dir]`](#eigenpal-agentsagent-validate-options-dir)
22
23
  - [`eigenpal agents|agent clone [options]`](#eigenpal-agentsagent-clone-options)
@@ -37,7 +38,6 @@ Manage Eigenpal agents: Git source, datasets, runs, experiments, sessions, and r
37
38
  - [`eigenpal agents|agent sync [options] [automation]`](#eigenpal-agentsagent-sync-options-automation)
38
39
  - [`eigenpal agents|agent file list|ls [options] <agent-id-or-slug>`](#eigenpal-agentsagent-file-listls-options-agent-id-or-slug)
39
40
  - [`eigenpal agents|agent file get [options] <agent-id-or-slug> <remote-path>`](#eigenpal-agentsagent-file-get-options-agent-id-or-slug-remote-path)
40
- - [`eigenpal agents|agent file put [options] <agent-id-or-slug> <remote-path> <local-path>`](#eigenpal-agentsagent-file-put-options-agent-id-or-slug-remote-path-local-path)
41
41
  - [`eigenpal agents|agent file diff [options] <agent-id-or-slug> <remote-path> <local-path>`](#eigenpal-agentsagent-file-diff-options-agent-id-or-slug-remote-path-local-path)
42
42
  - [`eigenpal agents|agent secret set [options] <name>`](#eigenpal-agentsagent-secret-set-options-name)
43
43
  - [`eigenpal agents|agent secret unset [options] <name>`](#eigenpal-agentsagent-secret-unset-options-name)
@@ -48,10 +48,9 @@ Manage Eigenpal agents: Git source, datasets, runs, experiments, sessions, and r
48
48
  - [`eigenpal agents|agent dataset validate [options] [path]`](#eigenpal-agentsagent-dataset-validate-options-path)
49
49
  - [`eigenpal agents|agent runs list|ls [options] <target>`](#eigenpal-agentsagent-runs-listls-options-target)
50
50
  - [`eigenpal agents|agent runs get [options] <run-id>`](#eigenpal-agentsagent-runs-get-options-run-id)
51
- - [`eigenpal agents|agent runs rerun [options] <run-id>`](#eigenpal-agentsagent-runs-rerun-options-run-id)
52
- - [`eigenpal agents|agent runs pull [options] <run-id>`](#eigenpal-agentsagent-runs-pull-options-run-id)
53
51
  - [`eigenpal agents|agent runs compare|diff [options] <reference-run-id> <run-id>`](#eigenpal-agentsagent-runs-comparediff-options-reference-run-id-run-id)
54
52
  - [`eigenpal agents|agent runs artifacts|artifact list|ls [options] <run-id>`](#eigenpal-agentsagent-runs-artifactsartifact-listls-options-run-id)
53
+ - [`eigenpal agents|agent runs artifacts|artifact fetch [options] <run-id>`](#eigenpal-agentsagent-runs-artifactsartifact-fetch-options-run-id)
55
54
  - [`eigenpal agents|agent runs trace [options] <run-id>`](#eigenpal-agentsagent-runs-trace-options-run-id)
56
55
  - [`eigenpal agents|agent runs feedback|fb update [options] <run-id>`](#eigenpal-agentsagent-runs-feedbackfb-update-options-run-id)
57
56
  - [`eigenpal agents|agent runs feedback|fb resolve [options] <run-id>`](#eigenpal-agentsagent-runs-feedbackfb-resolve-options-run-id)
@@ -83,11 +82,11 @@ Manage Eigenpal agents: Git source, datasets, runs, experiments, sessions, and r
83
82
  ```
84
83
  agents
85
84
  ├── run <target>
85
+ ├── rerun <run-id>
86
86
  ├── list|ls
87
87
  ├── file
88
88
  │ ├── list|ls <agent-id-or-slug>
89
89
  │ ├── get <agent-id-or-slug> <remote-path>
90
- │ ├── put <agent-id-or-slug> <remote-path> <local-path>
91
90
  │ └── diff <agent-id-or-slug> <remote-path> <local-path>
92
91
  ├── validate [dir]
93
92
  ├── clone
@@ -118,11 +117,10 @@ agents
118
117
  ├── runs
119
118
  │ ├── list|ls <target>
120
119
  │ ├── get <run-id>
121
- │ ├── rerun <run-id>
122
- │ ├── pull <run-id>
123
120
  │ ├── compare|diff <reference-run-id> <run-id>
124
121
  │ ├── artifacts|artifact
125
- │ │ └── list|ls <run-id>
122
+ │ │ ├── list|ls <run-id>
123
+ │ │ └── fetch <run-id>
126
124
  │ ├── trace <run-id>
127
125
  │ ├── feedback|fb
128
126
  │ │ ├── update <run-id>
@@ -160,36 +158,36 @@ agents
160
158
 
161
159
  ### Core
162
160
 
163
- | Command | Description |
164
- | ---------------------------------------------------------- | --------------------------------------------------------------------------------------------------------------------------------------- |
165
- | `eigenpal agents\|agent run [options] <target>` | Run an agent target, e.g. agents.invoice-agent@latest. |
166
- | `eigenpal agents\|agent list\|ls [options]` | List agents. |
167
- | `eigenpal agents\|agent validate [options] [dir]` | Validate a local agent package (layout, manifest, schemas, and Git source rules). |
168
- | `eigenpal agents\|agent clone [options]` | Clone the organization source repository. |
169
- | `eigenpal agents\|agent install [options] [packageRef]` | Materialize a source package and its workspace dependencies. |
170
- | `eigenpal agents\|agent init [options] <name>` | Create a new source package scaffold. |
171
- | `eigenpal agents\|agent pull [options]` | Pull organization source from origin/main with --ff-only. For datasets use agents dataset pull; for run artifacts use agents runs pull. |
172
- | `eigenpal agents\|agent commit [options]` | Validate changed source packages and commit them. |
173
- | `eigenpal agents\|agent save [options]` | Validate, commit if dirty, and push the current source branch. |
174
- | `eigenpal agents\|agent push [options]` | Push the current organization source branch and tags. |
175
- | `eigenpal agents\|agent upgrade [options]` | Upgrade the source repository schema in place. |
176
- | `eigenpal agents\|agent doctor [options]` | Check organization source repository health. |
177
- | `eigenpal agents\|agent status [options]` | Show source repo and package status. |
178
- | `eigenpal agents\|agent deps [options]` | List package workspace dependencies. |
179
- | `eigenpal agents\|agent clean [options]` | Require a clean source working tree. |
180
- | `eigenpal agents\|agent show [options] <automation>` | Show Git-backed automation details. |
181
- | `eigenpal agents\|agent versions [options] <package>` | List package release versions. |
182
- | `eigenpal agents\|agent release [options] <version> [dir]` | Create and push an immutable package release tag. Never move or overwrite an existing tag; release a new patch instead. |
183
- | `eigenpal agents\|agent sync [options] [automation]` | Sync an automation from the latest Git source release. |
161
+ | Command | Description |
162
+ | ---------------------------------------------------------- | -------------------------------------------------------------------------------------------------------------------------------------------------- |
163
+ | `eigenpal agents\|agent run [options] <target>` | Run an agent target, e.g. agents.invoice-agent@latest. |
164
+ | `eigenpal agents\|agent rerun [options] <run-id>` | Create a new run from a previous run's stored input snapshot. |
165
+ | `eigenpal agents\|agent list\|ls [options]` | List agents. |
166
+ | `eigenpal agents\|agent validate [options] [dir]` | Validate a local agent package (layout, manifest, schemas, and Git source rules). |
167
+ | `eigenpal agents\|agent clone [options]` | Clone the organization source repository. |
168
+ | `eigenpal agents\|agent install [options] [packageRef]` | Materialize a source package and its workspace dependencies. |
169
+ | `eigenpal agents\|agent init [options] <name>` | Create a new source package scaffold. |
170
+ | `eigenpal agents\|agent pull [options]` | Pull organization source from origin/main with --ff-only. For datasets use agents dataset pull; for run artifacts use agents runs artifacts fetch. |
171
+ | `eigenpal agents\|agent commit [options]` | Validate changed source packages and commit them. |
172
+ | `eigenpal agents\|agent save [options]` | Validate, commit if dirty, and push the current source branch. |
173
+ | `eigenpal agents\|agent push [options]` | Push the current organization source branch and tags. |
174
+ | `eigenpal agents\|agent upgrade [options]` | Upgrade the source repository schema in place. |
175
+ | `eigenpal agents\|agent doctor [options]` | Check organization source repository health. |
176
+ | `eigenpal agents\|agent status [options]` | Show source repo and package status. |
177
+ | `eigenpal agents\|agent deps [options]` | List package workspace dependencies. |
178
+ | `eigenpal agents\|agent clean [options]` | Require a clean source working tree. |
179
+ | `eigenpal agents\|agent show [options] <automation>` | Show Git-backed automation details. |
180
+ | `eigenpal agents\|agent versions [options] <package>` | List package release versions. |
181
+ | `eigenpal agents\|agent release [options] <version> [dir]` | Create and push an immutable package release tag. Never move or overwrite an existing tag; release a new patch instead. |
182
+ | `eigenpal agents\|agent sync [options] [automation]` | Sync an automation from the latest Git source release. |
184
183
 
185
184
  ### File
186
185
 
187
- | Command | Description |
188
- | ------------------------------------------------------------------------------------------ | -------------------------------------------------------------------------------- |
189
- | `eigenpal agents\|agent file list\|ls [options] <agent-id-or-slug>` | List live files for an agent. |
190
- | `eigenpal agents\|agent file get [options] <agent-id-or-slug> <remote-path>` | Download one live agent file. |
191
- | `eigenpal agents\|agent file put [options] <agent-id-or-slug> <remote-path> <local-path>` | [removed] Git-backed agents — edit source in Git and run `eigenpal agents save`. |
192
- | `eigenpal agents\|agent file diff [options] <agent-id-or-slug> <remote-path> <local-path>` | Compare one live agent file against a local file. |
186
+ | Command | Description |
187
+ | ------------------------------------------------------------------------------------------ | ------------------------------------------------- |
188
+ | `eigenpal agents\|agent file list\|ls [options] <agent-id-or-slug>` | List live files for an agent. |
189
+ | `eigenpal agents\|agent file get [options] <agent-id-or-slug> <remote-path>` | Download one live agent file. |
190
+ | `eigenpal agents\|agent file diff [options] <agent-id-or-slug> <remote-path> <local-path>` | Compare one live agent file against a local file. |
193
191
 
194
192
  ### Secret
195
193
 
@@ -214,10 +212,9 @@ agents
214
212
  | -------------------------------------------------------------------------------------- | ---------------------------------------------------------------------------------------------------------------- |
215
213
  | `eigenpal agents\|agent runs list\|ls [options] <target>` | List runs for an agent target; unqualified targets include all source refs. |
216
214
  | `eigenpal agents\|agent runs get [options] <run-id>` | Get one agent run. |
217
- | `eigenpal agents\|agent runs rerun [options] <run-id>` | Create a new run from a previous run's stored input snapshot. |
218
- | `eigenpal agents\|agent runs pull [options] <run-id>` | Download run feedback, expected artifacts, files, and metadata. |
219
215
  | `eigenpal agents\|agent runs compare\|diff [options] <reference-run-id> <run-id>` | Compare one run against another run. PDF/DOCX text comparison uses pdftotext/python3 and reports byte fallbacks. |
220
216
  | `eigenpal agents\|agent runs artifacts\|artifact list\|ls [options] <run-id>` | List available run artifacts without downloading them. |
217
+ | `eigenpal agents\|agent runs artifacts\|artifact fetch [options] <run-id>` | Download run artifacts by canonical artifact path. |
221
218
  | `eigenpal agents\|agent runs trace [options] <run-id>` | Print raw trace.jsonl for a run, or write it with --out. |
222
219
  | `eigenpal agents\|agent runs feedback\|fb update [options] <run-id>` | Edit feedback state, rating, message, or expected JSON for a run. |
223
220
  | `eigenpal agents\|agent runs feedback\|fb resolve [options] <run-id>` | Mark run feedback as resolved. |
@@ -278,16 +275,37 @@ Run an agent target, e.g. agents.invoice-agent@latest.
278
275
 
279
276
  ### Options
280
277
 
281
- | Flag | Required | Default | Description |
282
- | ---------------------- | -------- | ------- | -------------------------------------------- |
283
- | `--base-url <url>` | no | | Server base URL |
284
- | `--json` | no | | Output the raw server response as JSON |
285
- | `--input-json <json>` | no | | JSON input object |
286
- | `--input-file <path>` | no | | Input file to upload as multipart form-data |
287
- | `--example <name>` | no | | Run a persisted dataset example by name |
288
- | `--wait` | no | | Poll until the run reaches a terminal status |
289
- | `--interval <seconds>` | no | `2` | Polling interval in seconds |
290
- | `--max-wait <seconds>` | no | `1800` | Maximum wait before exiting 2 |
278
+ | Flag | Required | Default | Description |
279
+ | --------------------------- | -------- | ------- | ---------------------------------------------------------------------------------------------------- |
280
+ | `--base-url <url>` | no | | Server base URL |
281
+ | `--json` | no | | Output the raw server response as JSON |
282
+ | `--input-json <json>` | no | | JSON input object |
283
+ | `--input-file <field=path>` | no | `[]` | Input file to upload as multipart form-data. Repeat for multiple files; bare paths use field "file". |
284
+ | `--example <name>` | no | | Run a persisted dataset example by name |
285
+ | `--wait` | no | | Poll until the run reaches a terminal status |
286
+ | `--interval <seconds>` | no | `2` | Polling interval in seconds |
287
+ | `--max-wait <seconds>` | no | `1800` | Maximum wait before exiting 2 |
288
+
289
+ ### `eigenpal agents|agent rerun [options] <run-id>`
290
+
291
+ Create a new run from a previous run's stored input snapshot.
292
+
293
+ ### Arguments
294
+
295
+ | Name | Required | Variadic | Description |
296
+ | -------- | -------- | -------- | ----------- |
297
+ | `run-id` | yes | no | |
298
+
299
+ ### Options
300
+
301
+ | Flag | Required | Default | Description |
302
+ | ---------------------- | -------- | ------- | -------------------------------------------------------------------------------------------------------- |
303
+ | `--base-url <url>` | no | | Server base URL |
304
+ | `--json` | no | | Output the raw server response as JSON |
305
+ | `--source-ref <ref>` | no | | Source ref for the new run (default: latest). Use "original" to reproduce the previous resolved version. |
306
+ | `--wait` | no | | Poll until the rerun reaches a terminal status |
307
+ | `--interval <seconds>` | no | `2` | Polling interval in seconds |
308
+ | `--max-wait <seconds>` | no | `1800` | Maximum wait before exiting 2 |
291
309
 
292
310
  ### `eigenpal agents|agent list|ls [options]`
293
311
 
@@ -369,7 +387,7 @@ Create a new source package scaffold.
369
387
 
370
388
  ### `eigenpal agents|agent pull [options]`
371
389
 
372
- Pull organization source from origin/main with --ff-only. For datasets use agents dataset pull; for run artifacts use agents runs pull.
390
+ Pull organization source from origin/main with --ff-only. For datasets use agents dataset pull; for run artifacts use agents runs artifacts fetch.
373
391
 
374
392
  ### Options
375
393
 
@@ -573,25 +591,6 @@ Download one live agent file.
573
591
  | `--json` | no | | Output the raw server response as JSON |
574
592
  | `--out <file>` | no | | Output file path |
575
593
 
576
- ### `eigenpal agents|agent file put [options] <agent-id-or-slug> <remote-path> <local-path>`
577
-
578
- [removed] Git-backed agents — edit source in Git and run `eigenpal agents save`.
579
-
580
- ### Arguments
581
-
582
- | Name | Required | Variadic | Description |
583
- | ------------------ | -------- | -------- | ----------- |
584
- | `agent-id-or-slug` | yes | no | |
585
- | `remote-path` | yes | no | |
586
- | `local-path` | yes | no | |
587
-
588
- ### Options
589
-
590
- | Flag | Required | Default | Description |
591
- | ------------------ | -------- | ------- | -------------------------------------- |
592
- | `--base-url <url>` | no | | Server base URL |
593
- | `--json` | no | | Output the raw server response as JSON |
594
-
595
594
  ### `eigenpal agents|agent file diff [options] <agent-id-or-slug> <remote-path> <local-path>`
596
595
 
597
596
  Compare one live agent file against a local file.
@@ -777,45 +776,6 @@ Get one agent run.
777
776
  | `--json` | no | | Output the raw server response as JSON |
778
777
  | `--include <parts>` | no | `"feedback"` | Comma-separated extra parts: feedback,expected,files,trace,issues |
779
778
 
780
- ### `eigenpal agents|agent runs rerun [options] <run-id>`
781
-
782
- Create a new run from a previous run's stored input snapshot.
783
-
784
- ### Arguments
785
-
786
- | Name | Required | Variadic | Description |
787
- | -------- | -------- | -------- | ----------- |
788
- | `run-id` | yes | no | |
789
-
790
- ### Options
791
-
792
- | Flag | Required | Default | Description |
793
- | ---------------------- | -------- | ------- | ---------------------------------------------- |
794
- | `--base-url <url>` | no | | Server base URL |
795
- | `--json` | no | | Output the raw server response as JSON |
796
- | `--wait` | no | | Poll until the rerun reaches a terminal status |
797
- | `--interval <seconds>` | no | `2` | Polling interval in seconds |
798
- | `--max-wait <seconds>` | no | `1800` | Maximum wait before exiting 2 |
799
-
800
- ### `eigenpal agents|agent runs pull [options] <run-id>`
801
-
802
- Download run feedback, expected artifacts, files, and metadata.
803
-
804
- ### Arguments
805
-
806
- | Name | Required | Variadic | Description |
807
- | -------- | -------- | -------- | ----------- |
808
- | `run-id` | yes | no | |
809
-
810
- ### Options
811
-
812
- | Flag | Required | Default | Description |
813
- | ------------------- | -------- | --------------------- | ---------------------------------------------------------------------------------------------- |
814
- | `--base-url <url>` | no | | Server base URL |
815
- | `--out <dir>` | no | | Output directory |
816
- | `--include <parts>` | no | `"feedback,expected"` | Comma-separated parts: feedback,expected,files,output,input,metadata,issues,trace,lockfile,all |
817
- | `--json` | no | | Output a JSON summary of written artifacts |
818
-
819
779
  ### `eigenpal agents|agent runs compare|diff [options] <reference-run-id> <run-id>`
820
780
 
821
781
  Compare one run against another run. PDF/DOCX text comparison uses pdftotext/python3 and reports byte fallbacks.
@@ -855,6 +815,26 @@ List available run artifacts without downloading them.
855
815
  | `--base-url <url>` | no | | Server base URL |
856
816
  | `--json` | no | | Output the raw server response as JSON |
857
817
 
818
+ ### `eigenpal agents|agent runs artifacts|artifact fetch [options] <run-id>`
819
+
820
+ Download run artifacts by canonical artifact path.
821
+
822
+ ### Arguments
823
+
824
+ | Name | Required | Variadic | Description |
825
+ | -------- | -------- | -------- | ----------- |
826
+ | `run-id` | yes | no | |
827
+
828
+ ### Options
829
+
830
+ | Flag | Required | Default | Description |
831
+ | ------------------- | -------- | ------- | ------------------------------------------------------------------------------- |
832
+ | `--base-url <url>` | no | | Server base URL |
833
+ | `--out <dir>` | no | | Output directory |
834
+ | `--include <parts>` | no | `"all"` | Comma-separated parts: output,input,metadata,issues,trace,lockfile,expected,all |
835
+ | `--path <path>` | no | `[]` | Fetch one exact artifact path from `artifacts list`; repeatable |
836
+ | `--json` | no | | Output a JSON summary of written artifacts |
837
+
858
838
  ### `eigenpal agents|agent runs trace [options] <run-id>`
859
839
 
860
840
  Print raw trace.jsonl for a run, or write it with --out.