@eagleoutice/flowr 2.2.12 → 2.2.13

package/r-bridge/lang-4.x/ast/model/nodes/r-number.d.ts

@@ -1,5 +1,5 @@
-import type { Leaf, Location, NoInfo } from '../model';
-import type { RType } from '../type';
+import type { Leaf, Location, NoInfo, RNode } from '../model';
+import { RType } from '../type';
 import type { RNumberValue } from '../../../convert-values';
 /**
  * A number like `3`, `-2.14`, `1L`, or `2i`.
@@ -10,3 +10,4 @@ export interface RNumber<Info = NoInfo> extends Leaf<Info>, Location {
     readonly type: RType.Number;
     content: RNumberValue;
 }
+export declare function isRNumber(node: RNode | undefined): node is RNumber;

package/r-bridge/lang-4.x/ast/model/nodes/r-number.js

@@ -1,3 +1,8 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
+exports.isRNumber = isRNumber;
+const type_1 = require("../type");
+function isRNumber(node) {
+    return node?.type === type_1.RType.Number;
+}
 //# sourceMappingURL=r-number.js.map

package/r-bridge/lang-4.x/ast/model/nodes/r-string.d.ts

@@ -1,6 +1,6 @@
-import type { Leaf, Location, NoInfo } from '../model';
-import type { RType } from '../type';
+import type { Leaf, Location, NoInfo, RNode } from '../model';
 import type { RStringValue } from '../../../convert-values';
+import { RType } from '../type';
 /**
  * Represents a string like `"hello"`, including raw strings like `r"(hello)"`.
  */
@@ -8,3 +8,4 @@ export interface RString<Info = NoInfo> extends Leaf<Info>, Location {
     readonly type: RType.String;
     content: RStringValue;
 }
+export declare function isRString(node: RNode | undefined): node is RString;

package/r-bridge/lang-4.x/ast/model/nodes/r-string.js

@@ -1,3 +1,8 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
+exports.isRString = isRString;
+const type_1 = require("../type");
+function isRString(node) {
+    return node?.type === type_1.RType.String;
+}
 //# sourceMappingURL=r-string.js.map

package/r-bridge/lang-4.x/ast/model/processing/decorate.d.ts

@@ -10,7 +10,7 @@
  */
 import type { NoInfo, RNode } from '../model';
 import type { SourceRange } from '../../../../../util/range';
-import { BiMap } from '../../../../../util/bimap';
+import { BiMap } from '../../../../../util/collections/bimap';
 import type { MergeableRecord } from '../../../../../util/objects';
 import { RoleInParent } from './role';
 import type { NodeId } from './node-id';

package/r-bridge/lang-4.x/ast/model/processing/decorate.js

@@ -17,7 +17,7 @@ exports.nodeToLocationId = nodeToLocationId;
 exports.deterministicLocationIdGenerator = deterministicLocationIdGenerator;
 exports.decorateAst = decorateAst;
 const assert_1 = require("../../../../../util/assert");
-const bimap_1 = require("../../../../../util/bimap");
+const bimap_1 = require("../../../../../util/collections/bimap");
 const type_1 = require("../type");
 const stateful_fold_1 = require("./stateful-fold");
 const r_function_call_1 = require("../nodes/r-function-call");

package/r-bridge/lang-4.x/ast/model/processing/fold.js

@@ -2,7 +2,9 @@
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.foldAst = foldAst;
 const stateful_fold_1 = require("./stateful-fold");
-const down = () => undefined;
+function down() {
+    return undefined;
+}
 /**
  * Folds in old functional-fashion over the AST structure.
  * <p>

package/r-bridge/lang-4.x/ast/model/processing/stateful-fold.d.ts

@@ -47,7 +47,7 @@ export interface StatefulFoldFunctions<Info, Down, Up> {
         foldWhile: (loop: RWhileLoop<Info>, condition: Up, body: Up, down: Down) => Up;
         foldRepeat: (loop: RRepeatLoop<Info>, body: Up, down: Down) => Up;
         foldNext: (next: RNext<Info>, down: Down) => Up;
-        foldBreak: (next: RBreak<Info>, down: Down) => Up;
+        foldBreak: (brk: RBreak<Info>, down: Down) => Up;
     };
     other: {
         foldComment: (comment: RComment<Info>, down: Down) => Up;

package/r-bridge/lang-4.x/ast/parser/main/internal/expression/normalize-expression.js

@@ -3,7 +3,7 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.normalizeExpression = normalizeExpression;
 const normalize_meta_1 = require("../../normalize-meta");
 const normalize_access_1 = require("../normalize-access");
-const arrays_1 = require("../../../../../../../util/arrays");
+const arrays_1 = require("../../../../../../../util/collections/arrays");
 const normalize_expressions_1 = require("../structure/normalize-expressions");
 const normalize_call_1 = require("../functions/normalize-call");
 const normalize_definition_1 = require("../functions/normalize-definition");

package/r-bridge/lang-4.x/ast/parser/main/internal/functions/normalize-argument.js

@@ -6,7 +6,7 @@ const normalize_meta_1 = require("../../normalize-meta");
 const assert_1 = require("../../../../../../../util/assert");
 const type_1 = require("../../../../model/type");
 const normalize_single_node_1 = require("../structure/normalize-single-node");
-const strings_1 = require("../../../../../../../util/strings");
+const strings_1 = require("../../../../../../../util/text/strings");
 /**
  * Either parses `[expr]` or `[SYMBOL_SUB, EQ_SUB, expr]` as an argument of a function call in R.
  * Probably directly called by the function call parser as otherwise, we do not expect to find arguments.

package/r-bridge/lang-4.x/ast/parser/main/internal/functions/normalize-call.js

@@ -3,7 +3,7 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.tryNormalizeFunctionCall = tryNormalizeFunctionCall;
 const parser_1 = require("../../../json/parser");
 const normalize_meta_1 = require("../../normalize-meta");
-const arrays_1 = require("../../../../../../../util/arrays");
+const arrays_1 = require("../../../../../../../util/collections/arrays");
 const assert_1 = require("../../../../../../../util/assert");
 const normalize_argument_1 = require("./normalize-argument");
 const r_function_call_1 = require("../../../../model/nodes/r-function-call");

package/r-bridge/lang-4.x/ast/parser/main/internal/functions/normalize-definition.js

@@ -4,7 +4,7 @@ exports.tryNormalizeFunctionDefinition = tryNormalizeFunctionDefinition;
 const parser_1 = require("../../../json/parser");
 const normalize_meta_1 = require("../../normalize-meta");
 const assert_1 = require("../../../../../../../util/assert");
-const arrays_1 = require("../../../../../../../util/arrays");
+const arrays_1 = require("../../../../../../../util/collections/arrays");
 const normalize_parameter_1 = require("./normalize-parameter");
 const type_1 = require("../../../../model/type");
 const normalize_expressions_1 = require("../structure/normalize-expressions");

package/r-bridge/lang-4.x/ast/parser/main/internal/normalize-access.js

@@ -3,7 +3,7 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.tryNormalizeAccess = tryNormalizeAccess;
 const normalize_argument_1 = require("./functions/normalize-argument");
 const parser_1 = require("../../json/parser");
-const arrays_1 = require("../../../../../../util/arrays");
+const arrays_1 = require("../../../../../../util/collections/arrays");
 const assert_1 = require("../../../../../../util/assert");
 const normalize_meta_1 = require("../normalize-meta");
 const type_1 = require("../../../model/type");

package/r-bridge/lang-4.x/ast/parser/main/internal/operators/normalize-binary.js

@@ -6,7 +6,7 @@ const parser_1 = require("../../../json/parser");
 const normalize_meta_1 = require("../../normalize-meta");
 const assert_1 = require("../../../../../../../util/assert");
 const log_1 = require("../../../../../../../util/log");
-const strings_1 = require("../../../../../../../util/strings");
+const strings_1 = require("../../../../../../../util/text/strings");
 const type_1 = require("../../../../model/type");
 const operators_1 = require("../../../../model/operators");
 const normalize_single_node_1 = require("../structure/normalize-single-node");

package/r-bridge/lang-4.x/ast/parser/main/internal/structure/normalize-root.js

@@ -4,7 +4,7 @@ exports.normalizeRootObjToAst = normalizeRootObjToAst;
 const normalize_meta_1 = require("../../normalize-meta");
 const normalize_expressions_1 = require("./normalize-expressions");
 const log_1 = require("../../../../../../../util/log");
-const arrays_1 = require("../../../../../../../util/arrays");
+const arrays_1 = require("../../../../../../../util/collections/arrays");
 const type_1 = require("../../../../model/type");
 /**
  * Takes the parse dta as object and produces an undecorated, normalized AST.

package/r-bridge/lang-4.x/ast/parser/main/internal/values/normalize-symbol.js

@@ -3,7 +3,7 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.tryNormalizeSymbol = tryNormalizeSymbol;
 const assert_1 = require("../../../../../../../util/assert");
 const normalize_meta_1 = require("../../normalize-meta");
-const strings_1 = require("../../../../../../../util/strings");
+const strings_1 = require("../../../../../../../util/text/strings");
 const type_1 = require("../../../../model/type");
 /**
  * Normalize the given object as an R symbol (incorporating namespace information).

package/r-bridge/lang-4.x/tree-sitter/tree-sitter-executor.d.ts

@@ -1,8 +1,8 @@
 import Parser from 'web-tree-sitter';
 import type { RParseRequest } from '../../retriever';
 import type { SyncParser } from '../../parser';
-export declare const DEFAULT_TREE_SITTER_R_WASM_PATH: string;
-export declare const DEFAULT_TREE_SITTER_WASM_PATH: string;
+export declare const DEFAULT_TREE_SITTER_R_WASM_PATH = "./node_modules/@eagleoutice/tree-sitter-r/tree-sitter-r.wasm";
+export declare const DEFAULT_TREE_SITTER_WASM_PATH = "./node_modules/web-tree-sitter/tree-sitter.wasm";
 /**
  * Synchronous and (way) faster alternative to the {@link RShell} using tree-sitter.
  */

package/r-bridge/lang-4.x/tree-sitter/tree-sitter-executor.js

@@ -8,8 +8,8 @@ const web_tree_sitter_1 = __importDefault(require("web-tree-sitter"));
 const fs_1 = __importDefault(require("fs"));
 const config_1 = require("../../../config");
 const log_1 = require("../../../util/log");
-exports.DEFAULT_TREE_SITTER_R_WASM_PATH = `${__dirname}/tree-sitter-r.wasm`;
-exports.DEFAULT_TREE_SITTER_WASM_PATH = `${__dirname}/tree-sitter.wasm`;
+exports.DEFAULT_TREE_SITTER_R_WASM_PATH = './node_modules/@eagleoutice/tree-sitter-r/tree-sitter-r.wasm';
+exports.DEFAULT_TREE_SITTER_WASM_PATH = './node_modules/web-tree-sitter/tree-sitter.wasm';
 const wasmLog = log_1.log.getSubLogger({ name: 'tree-sitter-wasm' });
 /**
  * Synchronous and (way) faster alternative to the {@link RShell} using tree-sitter.
@@ -27,13 +27,13 @@ class TreeSitterExecutor {
         const treeSitterWasmPath = overrideTreeSitterWasmPath ?? (0, config_1.getEngineConfig)('tree-sitter')?.treeSitterWasmPath ?? exports.DEFAULT_TREE_SITTER_WASM_PATH;
         // noinspection JSUnusedGlobalSymbols - this is used by emscripten, see https://emscripten.org/docs/api_reference/module.html
         await web_tree_sitter_1.default.init({
-            locateFile: (path, prefix) => {
+            locateFile: treeSitterWasmPath ? (path, prefix) => {
                 // allow setting a custom path for the tree sitter wasm file
                 if (path.endsWith('tree-sitter.wasm')) {
                     return treeSitterWasmPath;
                 }
                 return prefix + path;
-            },
+            } : undefined,
             onAbort: (s) => wasmLog.error(`Tree-sitter wasm aborted: ${s}`),
             print: (s) => wasmLog.debug(s),
             printErr: (s) => wasmLog.error(s)

package/r-bridge/lang-4.x/tree-sitter/tree-sitter-normalize.js

@@ -9,9 +9,9 @@ const type_1 = require("../ast/model/type");
 const retriever_1 = require("../../retriever");
 const convert_values_1 = require("../convert-values");
 const normalize_meta_1 = require("../ast/parser/main/normalize-meta");
-const arrays_1 = require("../../../util/arrays");
+const arrays_1 = require("../../../util/collections/arrays");
 const r_function_call_1 = require("../ast/model/nodes/r-function-call");
-const strings_1 = require("../../../util/strings");
+const strings_1 = require("../../../util/text/strings");
 const config_1 = require("../../../config");
 const log_1 = require("../../../util/log");
 /**
@@ -511,17 +511,35 @@ function convertTreeNode(node) {
                 lexeme: node.text,
                 ...defaultInfo
             };
+        case tree_sitter_types_1.TreeSitterType.Error:
+            return {
+                type: type_1.RType.ExpressionList,
+                location: undefined,
+                lexeme: undefined,
+                children: [],
+                grouping: undefined,
+                info: defaultInfo
+            };
         default:
             throw new normalizer_data_1.ParseError(`unexpected node type ${node.type} at ${JSON.stringify(range)}`);
     }
 }
 function makeSourceRange(node) {
-    return [
-        // tree-sitter is 0-based but we want 1-based
-        node.startPosition.row + 1, node.startPosition.column + 1,
-        // tree-sitter's end position is one off from ours, so we don't add 1 here
-        node.endPosition.row + 1, node.endPosition.column
-    ];
+    if (node.startPosition && node.endPosition) {
+        return [
+            // tree-sitter is 0-based but we want 1-based
+            node.startPosition.row + 1, node.startPosition.column + 1,
+            // tree-sitter's end position is one off from ours, so we don't add 1 here
+            node.endPosition.row + 1, node.endPosition.column
+        ];
+    }
+    else {
+        return [
+            (node.startPosition?.row ?? -2) + 1, (node.startPosition?.column ?? -2) + 1,
+            // tree-sitter's end position is one off from ours, so we don't add 1 here
+            (node.endPosition?.row ?? -2) + 1, node.endPosition?.column ?? -1
+        ];
+    }
 }
 function splitComments(nodes) {
     const comments = [];

package/r-bridge/retriever.js

@@ -12,7 +12,7 @@ exports.retrieveParseDataFromRCode = retrieveParseDataFromRCode;
 exports.retrieveNormalizedAstFromRCode = retrieveNormalizedAstFromRCode;
 exports.removeRQuotes = removeRQuotes;
 exports.retrieveNumberOfRTokensOfLastParse = retrieveNumberOfRTokensOfLastParse;
-const strings_1 = require("../util/strings");
+const strings_1 = require("../util/text/strings");
 const assert_1 = require("../util/assert");
 const shell_executor_1 = require("./shell-executor");
 const parser_1 = require("./lang-4.x/ast/parser/json/parser");

package/search/search-executor/search-generators.d.ts

@@ -1,7 +1,7 @@
 import type { FlowrSearchElement, FlowrSearchGeneratorNodeBase, FlowrSearchGetFilter, FlowrSearchInput } from '../flowr-search';
 import { FlowrSearchElements } from '../flowr-search';
 import type { Pipeline } from '../../core/steps/pipeline/pipeline';
-import type { TailTypesOrUndefined } from '../../util/arrays';
+import type { TailTypesOrUndefined } from '../../util/collections/arrays';
 import type { ParentInformation } from '../../r-bridge/lang-4.x/ast/model/processing/decorate';
 import type { SlicingCriteria } from '../../slicing/criterion/parse';
 /**

package/search/search-executor/search-transformer.d.ts

@@ -1,6 +1,6 @@
 import type { FlowrSearchElement, FlowrSearchElements, FlowrSearchInput, FlowrSearchTransformerNodeBase } from '../flowr-search';
 import type { Pipeline } from '../../core/steps/pipeline/pipeline';
-import type { LastOfArray, Tail2TypesOrUndefined, TailOfArray } from '../../util/arrays';
+import type { LastOfArray, Tail2TypesOrUndefined, TailOfArray } from '../../util/collections/arrays';
 import type { FlowrFilterExpression } from '../flowr-search-filters';
 import type { FlowrSearchGeneratorNode } from './search-generators';
 import type { ParentInformation } from '../../r-bridge/lang-4.x/ast/model/processing/decorate';

package/slicing/criterion/collect-all.js

@@ -2,7 +2,7 @@
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.collectAllSlicingCriteria = collectAllSlicingCriteria;
 const assert_1 = require("../../util/assert");
-const arrays_1 = require("../../util/arrays");
+const arrays_1 = require("../../util/collections/arrays");
 const r_function_call_1 = require("../../r-bridge/lang-4.x/ast/model/nodes/r-function-call");
 /**
  * Will create all possible slicing criteria for the given ast, based on the {@link SlicingCriteriaFilter}.

package/slicing/static/slice-call.js

@@ -24,13 +24,13 @@ function getAllFunctionCallTargets(dataflowGraph, callerInfo, baseEnvironment, q
     const activeEnvironment = (0, built_in_function_definition_1.retrieveActiveEnvironment)(callerInfo.environment, baseEnvironment);
     const name = callerInfo.name;
     (0, assert_1.guard)(name !== undefined, () => `name of id: ${callerInfo.id} can not be found in id map`);
-    const functionCallDefs = (0, resolve_by_name_1.resolveByName)(name, activeEnvironment, identifier_1.ReferenceType.Unknown)?.filter(d => d.definedAt !== built_in_1.BuiltIn)?.map(d => d.nodeId) ?? [];
+    const functionCallDefs = (0, resolve_by_name_1.resolveByName)(name, activeEnvironment, identifier_1.ReferenceType.Unknown)?.filter(d => !(0, built_in_1.isBuiltIn)(d.definedAt))?.map(d => d.nodeId) ?? [];
     for (const [target, outgoingEdge] of outgoingEdges[1].entries()) {
         if ((0, edge_1.edgeIncludesType)(outgoingEdge.types, edge_1.EdgeType.Calls)) {
             functionCallDefs.push(target);
         }
     }
-    const functionCallTargets = queue.memoizeCallTargets(functionCallDefs.join(';'), () => (0, linker_1.getAllLinkedFunctionDefinitions)(new Set(functionCallDefs), dataflowGraph));
+    const functionCallTargets = queue.memoizeCallTargets(functionCallDefs.join(';'), () => (0, linker_1.getAllLinkedFunctionDefinitions)(new Set(functionCallDefs), dataflowGraph)[0]);
     return [functionCallTargets, activeEnvironment];
 }
 function includeArgumentFunctionCallClosure(arg, baseEnvironment, activeEnvironment, queue, dataflowGraph) {
@@ -38,7 +38,7 @@ function includeArgumentFunctionCallClosure(arg, baseEnvironment, activeEnvironm
     if (!valueRoot) {
         return;
     }
-    const callTargets = queue.memoizeCallTargets(valueRoot, () => (0, linker_1.getAllLinkedFunctionDefinitions)(new Set([valueRoot]), dataflowGraph));
+    const callTargets = queue.memoizeCallTargets(valueRoot, () => (0, linker_1.getAllLinkedFunctionDefinitions)(new Set([valueRoot]), dataflowGraph)[0]);
     linkCallTargets(false, callTargets, activeEnvironment, (0, fingerprint_1.envFingerprint)(activeEnvironment), queue);
 }
 function linkCallTargets(onlyForSideEffects, functionCallTargets, activeEnvironment, activeEnvironmentFingerprint, queue) {
@@ -46,6 +46,16 @@ function linkCallTargets(onlyForSideEffects, functionCallTargets, activeEnvironm
         for (const exitPoint of functionCallTarget.exitPoints) {
             queue.add(exitPoint, activeEnvironment, activeEnvironmentFingerprint, onlyForSideEffects);
         }
+        // handle open reads
+        for (const openIn of functionCallTarget.subflow.in) {
+            // resolve them in the active env
+            if (openIn.name) {
+                const resolved = (0, resolve_by_name_1.resolveByName)(openIn.name, activeEnvironment, identifier_1.ReferenceType.Unknown);
+                for (const res of resolved ?? []) {
+                    (0, static_slicer_1.updatePotentialAddition)(queue, functionCallTarget.id, res.nodeId, activeEnvironment, activeEnvironmentFingerprint);
+                }
+            }
+        }
     }
 }
 /** returns the new threshold hit count */

package/statistics/features/supported/assignments/post-process.js

@@ -7,7 +7,7 @@ exports.postProcess = postProcess;
 const common_syntax_probability_1 = require("../../common-syntax-probability");
 const fs_1 = __importDefault(require("fs"));
 const path_1 = __importDefault(require("path"));
-const arrays_1 = require("../../../../util/arrays");
+const arrays_1 = require("../../../../util/collections/arrays");
 const assert_1 = require("../../../../util/assert");
 const numbers_1 = require("../../../../util/numbers");
 const summarizer_1 = require("../../../../util/summarizer");

package/statistics/features/supported/defined-functions/post-process.js

@@ -10,8 +10,8 @@ const defined_functions_1 = require("./defined-functions");
 const post_processing_1 = require("../../post-processing");
 const summarizer_1 = require("../../../../util/summarizer");
 const files_1 = require("../../../../util/files");
-const time_1 = require("../../../../util/time");
-const arrays_1 = require("../../../../util/arrays");
+const time_1 = require("../../../../util/text/time");
+const arrays_1 = require("../../../../util/collections/arrays");
 function getFnDefCsv(idx, info) {
     return `${JSON.stringify(idx)},${(0, summarizer_1.summarizedMeasurement2Csv)((0, summarizer_1.summarizeMeasurement)(info.total.flat()))}`
         + `,${(0, summarizer_1.summarizedMeasurement2Csv)((0, summarizer_1.summarizeMeasurement)(info.parameters.flat()))}`

package/statistics/features/supported/used-functions/post-process.js

@@ -10,7 +10,7 @@ const fs_1 = __importDefault(require("fs"));
 const used_functions_1 = require("./used-functions");
 const summarizer_1 = require("../../../../util/summarizer");
 const files_1 = require("../../../../util/files");
-const time_1 = require("../../../../util/time");
+const time_1 = require("../../../../util/text/time");
 const numbers_1 = require("../../../../util/numbers");
 function retrieveFunctionCallInformation(featureRoot, info, config, outputPath) {
     // each number[][] contains a 'number[]' per file

package/statistics/features/supported/used-packages/post-process.js

@@ -10,8 +10,8 @@ const fs_1 = __importDefault(require("fs"));
 const path_1 = __importDefault(require("path"));
 const summarizer_1 = require("../../../../util/summarizer");
 const files_1 = require("../../../../util/files");
-const strings_1 = require("../../../../util/strings");
-const arrays_1 = require("../../../../util/arrays");
+const strings_1 = require("../../../../util/text/strings");
+const arrays_1 = require("../../../../util/collections/arrays");
 function postProcess(featureRoot, info, outputPath, config) {
     const collected = {};
     for (const [filepath, data] of info.entries()) {

package/statistics/features/supported/values/post-process.js

@@ -8,9 +8,9 @@ const fs_1 = __importDefault(require("fs"));
 const path_1 = __importDefault(require("path"));
 const post_processing_1 = require("../../post-processing");
 const summarizer_1 = require("../../../../util/summarizer");
-const time_1 = require("../../../../util/time");
+const time_1 = require("../../../../util/text/time");
 const files_1 = require("../../../../util/files");
-const arrays_1 = require("../../../../util/arrays");
+const arrays_1 = require("../../../../util/collections/arrays");
 function postProcess(featureRoot, info, outputPath, config) {
     const collected = {};
     for (const [filepath, data] of info.entries()) {

package/statistics/output/print-stats.js

@@ -4,10 +4,10 @@ exports.minMaxAvgAndMedian = minMaxAvgAndMedian;
 exports.statsString = statsString;
 exports.printFeatureStatistics = printFeatureStatistics;
 exports.printFeatureStatisticsEntry = printFeatureStatisticsEntry;
-const ansi_1 = require("../../util/ansi");
+const ansi_1 = require("../../util/text/ansi");
 const json_1 = require("../../util/json");
 const feature_1 = require("../features/feature");
-const arrays_1 = require("../../util/arrays");
+const arrays_1 = require("../../util/collections/arrays");
 function minMaxAvgAndMedian(data) {
     data = data.sort((a, b) => a - b);
     const sum = (0, arrays_1.arraySum)(data);

package/statistics/summarizer/post-process/clusterer.d.ts

@@ -1,4 +1,4 @@
-import { DefaultMap } from '../../../util/defaultmap';
+import { DefaultMap } from '../../../util/collections/defaultmap';
 import type { MergeableRecord } from '../../../util/objects';
 import type { NodeId } from '../../../r-bridge/lang-4.x/ast/model/processing/node-id';
 export type ContextsWithCount = DefaultMap<NodeId, number>;

package/statistics/summarizer/post-process/clusterer.js

@@ -11,7 +11,7 @@ exports.clusterStatisticsOutput = clusterStatisticsOutput;
  * @module
  */
 const n_readlines_1 = __importDefault(require("n-readlines"));
-const defaultmap_1 = require("../../../util/defaultmap");
+const defaultmap_1 = require("../../../util/collections/defaultmap");
 const decorate_1 = require("../../../r-bridge/lang-4.x/ast/model/processing/decorate");
 /**
  * Takes a statistics file like `statistics-out/top-2023-01-01-00-00-00/Assignments/assignmentOperator.txt` and clusters the values by context

package/statistics/summarizer/post-process/histogram.js

@@ -7,11 +7,11 @@ exports.histogramsFromClusters = histogramsFromClusters;
 exports.histogramFromNumbers = histogramFromNumbers;
 exports.histograms2table = histograms2table;
 const fs_1 = __importDefault(require("fs"));
-const bimap_1 = require("../../../util/bimap");
-const defaultmap_1 = require("../../../util/defaultmap");
+const bimap_1 = require("../../../util/collections/bimap");
+const defaultmap_1 = require("../../../util/collections/defaultmap");
 const assert_1 = require("../../../util/assert");
 const summarizer_1 = require("../../../util/summarizer");
-const arrays_1 = require("../../../util/arrays");
+const arrays_1 = require("../../../util/collections/arrays");
 /**
  * Produces column-wise histogram-information based on a {@link ClusterReport}.
  *

package/statistics/summarizer/post-process/post-process-output.js

@@ -9,12 +9,12 @@ const path_1 = __importDefault(require("path"));
 const fs_1 = __importDefault(require("fs"));
 const clusterer_1 = require("./clusterer");
 const log_1 = require("../../../util/log");
-const defaultmap_1 = require("../../../util/defaultmap");
-const ansi_1 = require("../../../util/ansi");
+const defaultmap_1 = require("../../../util/collections/defaultmap");
+const ansi_1 = require("../../../util/text/ansi");
 const feature_1 = require("../../features/feature");
 const decorate_1 = require("../../../r-bridge/lang-4.x/ast/model/processing/decorate");
 const file_provider_1 = require("../../output/file-provider");
-const arrays_1 = require("../../../util/arrays");
+const arrays_1 = require("../../../util/collections/arrays");
 /**
  * Post process the collections in a given folder, reducing them in a memory preserving way.
  *

package/statistics/summarizer/second-phase/process.js

@@ -7,9 +7,9 @@ exports.postProcessFeatures = postProcessFeatures;
 exports.postProcessFeatureFolder = postProcessFeatureFolder;
 const fs_1 = __importDefault(require("fs"));
 const path_1 = __importDefault(require("path"));
-const time_1 = require("../../../util/time");
+const time_1 = require("../../../util/text/time");
 const summarizer_1 = require("../../../util/summarizer");
-const arrays_1 = require("../../../util/arrays");
+const arrays_1 = require("../../../util/collections/arrays");
 const files_1 = require("../../../util/files");
 const assert_1 = require("../../../util/assert");
 const feature_1 = require("../../features/feature");

package/statistics/summarizer/summarizer.js

@@ -10,9 +10,9 @@ const path_1 = __importDefault(require("path"));
 const process_1 = require("./first-phase/process");
 const process_2 = require("./second-phase/process");
 const summarizer_1 = require("../../util/summarizer");
-const strings_1 = require("../../util/strings");
+const strings_1 = require("../../util/text/strings");
 const files_1 = require("../../util/files");
-const time_1 = require("../../util/time");
+const time_1 = require("../../util/text/time");
 const log_1 = require("../../util/log");
 exports.statisticsFileNameRegex = /.*--.*\.tar\.gz$/;
 /**

package/util/assert.js

@@ -7,6 +7,7 @@ exports.isUndefined = isUndefined;
 exports.isNotNull = isNotNull;
 exports.guard = guard;
 /* v8 ignore next */
+const version_1 = require("./version");
 function assertUnreachable(x) {
     throw new Error(`Unexpected object: ${JSON.stringify(x)}`);
 }
@@ -19,9 +20,43 @@ function isUndefined(x) {
 function isNotNull(x) {
     return x !== null;
 }
+function prepareStack(stack) {
+    if (!stack) {
+        return 'No stack trace available';
+    }
+    // remove the first line which is the error message
+    let lines = stack.split('\n');
+    lines.shift();
+    lines.shift();
+    lines.shift();
+    // clip over 8
+    if (lines.length > 8) {
+        lines = [...lines.slice(0, 3),
+            '...', ...lines.slice(lines.length - 5)];
+    }
+    return lines.map(l => l.replaceAll(/\(\/.*(src|test)/g, '(<>/$1')).join('\n');
+}
+function getGuardIssueUrl(message) {
+    const body = encodeURIComponent(`<!-- Please describe your issue in more detail below! -->
+
+
+<!-- Automatically generated issue metadata, please do not edit or delete content below this line -->
+---
+
+flowR version: ${(0, version_1.flowrVersion)().toString()}
+node version: ${process.version}
+node arch: ${process.arch}
+node platform: ${process.platform}
+message: \`${message}\`
+stack trace:\n\`\`\`\n${prepareStack(new Error().stack)}\n\`\`\`
+
+---
+	`).replaceAll('(', '%28').replaceAll(')', '%29').replaceAll('-', '%2D');
+    return `https://github.com/flowr-analysis/flowr/issues/new?body=${body}`;
+}
 class GuardError extends Error {
     constructor(message) {
-        super(message);
+        super(message + '\n Report a Bug: ' + getGuardIssueUrl(message));
         this.name = 'GuardError';
     }
 }