@eagleoutice/flowr 2.1.12 → 2.2.0

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Files changed (93) hide show
  1. package/README.md +0 -1
  2. package/benchmark/slicer.d.ts +5 -12
  3. package/benchmark/slicer.js +46 -28
  4. package/cli/benchmark-app.d.ts +2 -0
  5. package/cli/benchmark-app.js +2 -1
  6. package/cli/benchmark-helper-app.d.ts +2 -0
  7. package/cli/benchmark-helper-app.js +2 -2
  8. package/cli/common/options.js +3 -1
  9. package/cli/flowr-main-options.js +36 -2
  10. package/cli/flowr.d.ts +6 -0
  11. package/cli/flowr.js +51 -24
  12. package/cli/repl/commands/repl-cfg.js +2 -4
  13. package/cli/repl/commands/repl-dataflow.js +2 -4
  14. package/cli/repl/commands/repl-execute.d.ts +2 -2
  15. package/cli/repl/commands/repl-execute.js +15 -5
  16. package/cli/repl/commands/repl-lineage.js +2 -4
  17. package/cli/repl/commands/repl-main.d.ts +2 -2
  18. package/cli/repl/commands/repl-normalize.js +2 -4
  19. package/cli/repl/commands/repl-parse.js +2 -4
  20. package/cli/repl/commands/repl-query.js +6 -8
  21. package/cli/repl/commands/repl-version.d.ts +5 -4
  22. package/cli/repl/commands/repl-version.js +10 -9
  23. package/cli/repl/core.d.ts +5 -5
  24. package/cli/repl/core.js +8 -12
  25. package/cli/repl/print-version.d.ts +2 -2
  26. package/cli/repl/print-version.js +3 -3
  27. package/cli/repl/server/connection.d.ts +3 -3
  28. package/cli/repl/server/connection.js +5 -7
  29. package/cli/repl/server/messages/message-hello.js +2 -1
  30. package/cli/repl/server/server.d.ts +4 -3
  31. package/cli/repl/server/server.js +7 -5
  32. package/cli/slicer-app.js +1 -1
  33. package/config.d.ts +36 -4
  34. package/config.js +30 -1
  35. package/core/pipeline-executor.d.ts +1 -1
  36. package/core/pipeline-executor.js +1 -1
  37. package/core/steps/all/core/00-parse.d.ts +4 -18
  38. package/core/steps/all/core/00-parse.js +2 -11
  39. package/core/steps/all/core/01-parse-tree-sitter.d.ts +23 -0
  40. package/core/steps/all/core/01-parse-tree-sitter.js +19 -0
  41. package/core/steps/all/core/10-normalize.d.ts +3 -2
  42. package/core/steps/all/core/10-normalize.js +1 -0
  43. package/core/steps/all/core/11-normalize-tree-sitter.d.ts +25 -0
  44. package/core/steps/all/core/11-normalize-tree-sitter.js +27 -0
  45. package/core/steps/all/core/20-dataflow.d.ts +2 -0
  46. package/core/steps/all/core/20-dataflow.js +1 -1
  47. package/core/steps/pipeline/default-pipelines.d.ts +368 -23
  48. package/core/steps/pipeline/default-pipelines.js +42 -4
  49. package/dataflow/extractor.d.ts +2 -1
  50. package/dataflow/extractor.js +2 -1
  51. package/dataflow/internal/process/functions/call/built-in/built-in-source.js +6 -5
  52. package/dataflow/processor.d.ts +2 -0
  53. package/documentation/doc-util/doc-auto-gen.js +2 -1
  54. package/documentation/doc-util/doc-cfg.js +1 -1
  55. package/documentation/doc-util/doc-dfg.js +2 -2
  56. package/documentation/doc-util/doc-files.d.ts +1 -0
  57. package/documentation/doc-util/doc-files.js +4 -0
  58. package/documentation/doc-util/doc-normalized-ast.js +2 -3
  59. package/documentation/doc-util/doc-query.js +1 -1
  60. package/documentation/doc-util/doc-search.js +1 -1
  61. package/documentation/doc-util/doc-types.js +2 -2
  62. package/documentation/print-dataflow-graph-wiki.js +15 -15
  63. package/documentation/print-engines-wiki.d.ts +1 -0
  64. package/documentation/print-engines-wiki.js +82 -0
  65. package/documentation/print-interface-wiki.js +6 -7
  66. package/documentation/print-normalized-ast-wiki.js +1 -1
  67. package/package.json +9 -5
  68. package/queries/catalog/cluster-query/cluster-query-format.d.ts +5 -4
  69. package/queries/catalog/dataflow-query/dataflow-query-format.d.ts +5 -4
  70. package/queries/catalog/dependencies-query/dependencies-query-format.d.ts +5 -4
  71. package/queries/catalog/id-map-query/id-map-query-format.d.ts +5 -4
  72. package/queries/catalog/lineage-query/lineage-query-format.d.ts +5 -4
  73. package/queries/catalog/normalized-ast-query/normalized-ast-query-format.d.ts +5 -4
  74. package/queries/catalog/search-query/search-query-format.d.ts +5 -4
  75. package/queries/catalog/static-slice-query/static-slice-query-format.d.ts +5 -4
  76. package/queries/query.d.ts +40 -32
  77. package/r-bridge/lang-4.x/ast/parser/json/parser.d.ts +4 -2
  78. package/r-bridge/lang-4.x/ast/parser/json/parser.js +5 -0
  79. package/r-bridge/lang-4.x/tree-sitter/tree-sitter-executor.d.ts +18 -0
  80. package/r-bridge/lang-4.x/tree-sitter/tree-sitter-executor.js +57 -0
  81. package/r-bridge/lang-4.x/tree-sitter/tree-sitter-normalize.d.ts +3 -0
  82. package/r-bridge/lang-4.x/tree-sitter/tree-sitter-normalize.js +541 -0
  83. package/r-bridge/lang-4.x/tree-sitter/tree-sitter-types.d.ts +35 -0
  84. package/r-bridge/lang-4.x/tree-sitter/tree-sitter-types.js +40 -0
  85. package/r-bridge/parser.d.ts +32 -0
  86. package/r-bridge/parser.js +14 -0
  87. package/r-bridge/shell-executor.d.ts +37 -1
  88. package/r-bridge/shell-executor.js +39 -0
  89. package/r-bridge/shell.d.ts +12 -6
  90. package/r-bridge/shell.js +15 -6
  91. package/search/search-optimizer/search-optimizer.js +1 -1
  92. package/statistics/statistics.js +1 -1
  93. package/util/version.js +1 -1
package/queries/catalog/cluster-query/cluster-query-format.d.ts CHANGED
@@ -18,7 +18,7 @@ export declare const ClusterQueryDefinition: {
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  readonly name: "parse";
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  readonly humanReadableName: "parse with R shell";
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  readonly description: "Parse the given R code into an AST";
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- readonly processor: (_results: unknown, input: Partial<import("../../../core/steps/all/core/00-parse").ParseRequiredInput>) => Promise<import("../../../core/steps/all/core/00-parse").ParseStepOutput>;
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+ readonly processor: (_results: unknown, input: Partial<import("../../../r-bridge/parser").ParseRequiredInput<string>>) => Promise<import("../../../r-bridge/parser").ParseStepOutput<string>>;
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  readonly executed: import("../../../core/steps/pipeline-step").PipelineStepStage.OncePerFile;
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  readonly printer: {
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  readonly 0: typeof import("../../../core/print/print").internalPrinter;
@@ -26,16 +26,16 @@ export declare const ClusterQueryDefinition: {
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  (value: any, replacer?: (this: any, key: string, value: any) => any, space?: string | number): string;
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  (value: any, replacer?: (number | string)[] | null, space?: string | number): string;
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  };
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- readonly 5: ({ parsed }: import("../../../core/steps/all/core/00-parse").ParseStepOutput, config: import("../../../util/quads").QuadSerializationConfiguration) => string;
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+ readonly 5: ({ parsed }: import("../../../r-bridge/parser").ParseStepOutput<string>, config: import("../../../util/quads").QuadSerializationConfiguration) => string;
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  };
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  readonly dependencies: readonly [];
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- readonly requiredInput: import("../../../core/steps/all/core/00-parse").ParseRequiredInput;
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+ readonly requiredInput: import("../../../r-bridge/parser").ParseRequiredInput<string>;
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  } | {
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  readonly name: "normalize";
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  readonly humanReadableName: "normalize";
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  readonly description: "Normalize the AST to flowR's AST";
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  readonly processor: (results: {
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- parse?: import("../../../core/steps/all/core/00-parse").ParseStepOutput;
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+ parse?: import("../../../r-bridge/parser").ParseStepOutput<string>;
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  }, input: Partial<import("../../../core/steps/all/core/10-normalize").NormalizeRequiredInput>) => import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").NormalizedAst<import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").ParentInformation, import("../../../r-bridge/lang-4.x/ast/model/model").RNode<import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").ParentInformation>>;
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  readonly executed: import("../../../core/steps/pipeline-step").PipelineStepStage.OncePerFile;
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  readonly printer: {
@@ -53,6 +53,7 @@ export declare const ClusterQueryDefinition: {
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  normalize?: import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").NormalizedAst;
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  }, input: {
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  request?: import("../../../r-bridge/retriever").RParseRequests;
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+ parser?: import("../../../r-bridge/parser").Parser<import("../../../r-bridge/parser").KnownParserType>;
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  }) => import("../../../dataflow/info").DataflowInformation;
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  readonly requiredInput: {};
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  readonly name: "dataflow";
package/queries/catalog/dataflow-query/dataflow-query-format.d.ts CHANGED
@@ -18,7 +18,7 @@ export declare const DataflowQueryDefinition: {
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  readonly name: "parse";
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  readonly humanReadableName: "parse with R shell";
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  readonly description: "Parse the given R code into an AST";
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- readonly processor: (_results: unknown, input: Partial<import("../../../core/steps/all/core/00-parse").ParseRequiredInput>) => Promise<import("../../../core/steps/all/core/00-parse").ParseStepOutput>;
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+ readonly processor: (_results: unknown, input: Partial<import("../../../r-bridge/parser").ParseRequiredInput<string>>) => Promise<import("../../../r-bridge/parser").ParseStepOutput<string>>;
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  readonly executed: import("../../../core/steps/pipeline-step").PipelineStepStage.OncePerFile;
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  readonly printer: {
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  readonly 0: typeof import("../../../core/print/print").internalPrinter;
@@ -26,16 +26,16 @@ export declare const DataflowQueryDefinition: {
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  (value: any, replacer?: (this: any, key: string, value: any) => any, space?: string | number): string;
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  (value: any, replacer?: (number | string)[] | null, space?: string | number): string;
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  };
29
- readonly 5: ({ parsed }: import("../../../core/steps/all/core/00-parse").ParseStepOutput, config: import("../../../util/quads").QuadSerializationConfiguration) => string;
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+ readonly 5: ({ parsed }: import("../../../r-bridge/parser").ParseStepOutput<string>, config: import("../../../util/quads").QuadSerializationConfiguration) => string;
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  };
31
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  readonly dependencies: readonly [];
32
- readonly requiredInput: import("../../../core/steps/all/core/00-parse").ParseRequiredInput;
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+ readonly requiredInput: import("../../../r-bridge/parser").ParseRequiredInput<string>;
33
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  } | {
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  readonly name: "normalize";
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  readonly humanReadableName: "normalize";
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  readonly description: "Normalize the AST to flowR's AST";
37
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  readonly processor: (results: {
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- parse?: import("../../../core/steps/all/core/00-parse").ParseStepOutput;
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+ parse?: import("../../../r-bridge/parser").ParseStepOutput<string>;
39
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  }, input: Partial<import("../../../core/steps/all/core/10-normalize").NormalizeRequiredInput>) => import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").NormalizedAst<import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").ParentInformation, import("../../../r-bridge/lang-4.x/ast/model/model").RNode<import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").ParentInformation>>;
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  readonly executed: import("../../../core/steps/pipeline-step").PipelineStepStage.OncePerFile;
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  readonly printer: {
@@ -53,6 +53,7 @@ export declare const DataflowQueryDefinition: {
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  normalize?: import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").NormalizedAst;
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  }, input: {
55
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  request?: import("../../../r-bridge/retriever").RParseRequests;
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+ parser?: import("../../../r-bridge/parser").Parser<import("../../../r-bridge/parser").KnownParserType>;
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  }) => import("../../../dataflow/info").DataflowInformation;
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  readonly requiredInput: {};
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  readonly name: "dataflow";
package/queries/catalog/dependencies-query/dependencies-query-format.d.ts CHANGED
@@ -49,7 +49,7 @@ export declare const DependenciesQueryDefinition: {
49
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  readonly name: "parse";
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  readonly humanReadableName: "parse with R shell";
51
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  readonly description: "Parse the given R code into an AST";
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- readonly processor: (_results: unknown, input: Partial<import("../../../core/steps/all/core/00-parse").ParseRequiredInput>) => Promise<import("../../../core/steps/all/core/00-parse").ParseStepOutput>;
52
+ readonly processor: (_results: unknown, input: Partial<import("../../../r-bridge/parser").ParseRequiredInput<string>>) => Promise<import("../../../r-bridge/parser").ParseStepOutput<string>>;
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  readonly executed: import("../../../core/steps/pipeline-step").PipelineStepStage.OncePerFile;
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  readonly printer: {
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  readonly 0: typeof import("../../../core/print/print").internalPrinter;
@@ -57,16 +57,16 @@ export declare const DependenciesQueryDefinition: {
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  (value: any, replacer?: (this: any, key: string, value: any) => any, space?: string | number): string;
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  (value: any, replacer?: (number | string)[] | null, space?: string | number): string;
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  };
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- readonly 5: ({ parsed }: import("../../../core/steps/all/core/00-parse").ParseStepOutput, config: import("../../../util/quads").QuadSerializationConfiguration) => string;
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+ readonly 5: ({ parsed }: import("../../../r-bridge/parser").ParseStepOutput<string>, config: import("../../../util/quads").QuadSerializationConfiguration) => string;
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  };
62
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  readonly dependencies: readonly [];
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- readonly requiredInput: import("../../../core/steps/all/core/00-parse").ParseRequiredInput;
63
+ readonly requiredInput: import("../../../r-bridge/parser").ParseRequiredInput<string>;
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  } | {
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  readonly name: "normalize";
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  readonly humanReadableName: "normalize";
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  readonly description: "Normalize the AST to flowR's AST";
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  readonly processor: (results: {
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- parse?: import("../../../core/steps/all/core/00-parse").ParseStepOutput;
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+ parse?: import("../../../r-bridge/parser").ParseStepOutput<string>;
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  }, input: Partial<import("../../../core/steps/all/core/10-normalize").NormalizeRequiredInput>) => import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").NormalizedAst<import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").ParentInformation, import("../../../r-bridge/lang-4.x/ast/model/model").RNode<import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").ParentInformation>>;
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  readonly executed: import("../../../core/steps/pipeline-step").PipelineStepStage.OncePerFile;
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  readonly printer: {
@@ -84,6 +84,7 @@ export declare const DependenciesQueryDefinition: {
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  normalize?: import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").NormalizedAst;
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  }, input: {
86
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  request?: import("../../../r-bridge/retriever").RParseRequests;
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+ parser?: import("../../../r-bridge/parser").Parser<import("../../../r-bridge/parser").KnownParserType>;
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  }) => import("../../../dataflow/info").DataflowInformation;
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  readonly requiredInput: {};
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  readonly name: "dataflow";
package/queries/catalog/id-map-query/id-map-query-format.d.ts CHANGED
@@ -14,7 +14,7 @@ export declare const IdMapQueryDefinition: {
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  readonly name: "parse";
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  readonly humanReadableName: "parse with R shell";
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  readonly description: "Parse the given R code into an AST";
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- readonly processor: (_results: unknown, input: Partial<import("../../../core/steps/all/core/00-parse").ParseRequiredInput>) => Promise<import("../../../core/steps/all/core/00-parse").ParseStepOutput>;
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+ readonly processor: (_results: unknown, input: Partial<import("../../../r-bridge/parser").ParseRequiredInput<string>>) => Promise<import("../../../r-bridge/parser").ParseStepOutput<string>>;
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  readonly executed: import("../../../core/steps/pipeline-step").PipelineStepStage.OncePerFile;
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  readonly printer: {
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  readonly 0: typeof import("../../../core/print/print").internalPrinter;
@@ -22,16 +22,16 @@ export declare const IdMapQueryDefinition: {
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  (value: any, replacer?: (this: any, key: string, value: any) => any, space?: string | number): string;
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  (value: any, replacer?: (number | string)[] | null, space?: string | number): string;
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  };
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- readonly 5: ({ parsed }: import("../../../core/steps/all/core/00-parse").ParseStepOutput, config: import("../../../util/quads").QuadSerializationConfiguration) => string;
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+ readonly 5: ({ parsed }: import("../../../r-bridge/parser").ParseStepOutput<string>, config: import("../../../util/quads").QuadSerializationConfiguration) => string;
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  };
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  readonly dependencies: readonly [];
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- readonly requiredInput: import("../../../core/steps/all/core/00-parse").ParseRequiredInput;
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+ readonly requiredInput: import("../../../r-bridge/parser").ParseRequiredInput<string>;
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  } | {
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  readonly name: "normalize";
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  readonly humanReadableName: "normalize";
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  readonly description: "Normalize the AST to flowR's AST";
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  readonly processor: (results: {
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- parse?: import("../../../core/steps/all/core/00-parse").ParseStepOutput;
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+ parse?: import("../../../r-bridge/parser").ParseStepOutput<string>;
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  }, input: Partial<import("../../../core/steps/all/core/10-normalize").NormalizeRequiredInput>) => import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").NormalizedAst<import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").ParentInformation, import("../../../r-bridge/lang-4.x/ast/model/model").RNode<import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").ParentInformation>>;
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  readonly executed: import("../../../core/steps/pipeline-step").PipelineStepStage.OncePerFile;
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  readonly printer: {
@@ -49,6 +49,7 @@ export declare const IdMapQueryDefinition: {
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  normalize?: import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").NormalizedAst;
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  }, input: {
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  request?: import("../../../r-bridge/retriever").RParseRequests;
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+ parser?: import("../../../r-bridge/parser").Parser<import("../../../r-bridge/parser").KnownParserType>;
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  }) => import("../../../dataflow/info").DataflowInformation;
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  readonly requiredInput: {};
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  readonly name: "dataflow";
package/queries/catalog/lineage-query/lineage-query-format.d.ts CHANGED
@@ -20,7 +20,7 @@ export declare const LineageQueryDefinition: {
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  readonly name: "parse";
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  readonly humanReadableName: "parse with R shell";
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  readonly description: "Parse the given R code into an AST";
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- readonly processor: (_results: unknown, input: Partial<import("../../../core/steps/all/core/00-parse").ParseRequiredInput>) => Promise<import("../../../core/steps/all/core/00-parse").ParseStepOutput>;
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+ readonly processor: (_results: unknown, input: Partial<import("../../../r-bridge/parser").ParseRequiredInput<string>>) => Promise<import("../../../r-bridge/parser").ParseStepOutput<string>>;
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  readonly executed: import("../../../core/steps/pipeline-step").PipelineStepStage.OncePerFile;
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  readonly printer: {
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  readonly 0: typeof import("../../../core/print/print").internalPrinter;
@@ -28,16 +28,16 @@ export declare const LineageQueryDefinition: {
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  (value: any, replacer?: (this: any, key: string, value: any) => any, space?: string | number): string;
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  (value: any, replacer?: (number | string)[] | null, space?: string | number): string;
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  };
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- readonly 5: ({ parsed }: import("../../../core/steps/all/core/00-parse").ParseStepOutput, config: import("../../../util/quads").QuadSerializationConfiguration) => string;
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+ readonly 5: ({ parsed }: import("../../../r-bridge/parser").ParseStepOutput<string>, config: import("../../../util/quads").QuadSerializationConfiguration) => string;
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  };
33
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  readonly dependencies: readonly [];
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- readonly requiredInput: import("../../../core/steps/all/core/00-parse").ParseRequiredInput;
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+ readonly requiredInput: import("../../../r-bridge/parser").ParseRequiredInput<string>;
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  } | {
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  readonly name: "normalize";
37
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  readonly humanReadableName: "normalize";
38
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  readonly description: "Normalize the AST to flowR's AST";
39
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  readonly processor: (results: {
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- parse?: import("../../../core/steps/all/core/00-parse").ParseStepOutput;
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+ parse?: import("../../../r-bridge/parser").ParseStepOutput<string>;
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  }, input: Partial<import("../../../core/steps/all/core/10-normalize").NormalizeRequiredInput>) => import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").NormalizedAst<import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").ParentInformation, import("../../../r-bridge/lang-4.x/ast/model/model").RNode<import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").ParentInformation>>;
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  readonly executed: import("../../../core/steps/pipeline-step").PipelineStepStage.OncePerFile;
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  readonly printer: {
@@ -55,6 +55,7 @@ export declare const LineageQueryDefinition: {
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  normalize?: import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").NormalizedAst;
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  }, input: {
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  request?: import("../../../r-bridge/retriever").RParseRequests;
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+ parser?: import("../../../r-bridge/parser").Parser<import("../../../r-bridge/parser").KnownParserType>;
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  }) => import("../../../dataflow/info").DataflowInformation;
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  readonly requiredInput: {};
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  readonly name: "dataflow";
package/queries/catalog/normalized-ast-query/normalized-ast-query-format.d.ts CHANGED
@@ -17,7 +17,7 @@ export declare const NormalizedAstQueryDefinition: {
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  readonly name: "parse";
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  readonly humanReadableName: "parse with R shell";
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  readonly description: "Parse the given R code into an AST";
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- readonly processor: (_results: unknown, input: Partial<import("../../../core/steps/all/core/00-parse").ParseRequiredInput>) => Promise<import("../../../core/steps/all/core/00-parse").ParseStepOutput>;
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+ readonly processor: (_results: unknown, input: Partial<import("../../../r-bridge/parser").ParseRequiredInput<string>>) => Promise<import("../../../r-bridge/parser").ParseStepOutput<string>>;
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  readonly executed: import("../../../core/steps/pipeline-step").PipelineStepStage.OncePerFile;
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  readonly printer: {
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  readonly 0: typeof import("../../../core/print/print").internalPrinter;
@@ -25,16 +25,16 @@ export declare const NormalizedAstQueryDefinition: {
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  (value: any, replacer?: (this: any, key: string, value: any) => any, space?: string | number): string;
26
26
  (value: any, replacer?: (number | string)[] | null, space?: string | number): string;
27
27
  };
28
- readonly 5: ({ parsed }: import("../../../core/steps/all/core/00-parse").ParseStepOutput, config: import("../../../util/quads").QuadSerializationConfiguration) => string;
28
+ readonly 5: ({ parsed }: import("../../../r-bridge/parser").ParseStepOutput<string>, config: import("../../../util/quads").QuadSerializationConfiguration) => string;
29
29
  };
30
30
  readonly dependencies: readonly [];
31
- readonly requiredInput: import("../../../core/steps/all/core/00-parse").ParseRequiredInput;
31
+ readonly requiredInput: import("../../../r-bridge/parser").ParseRequiredInput<string>;
32
32
  } | {
33
33
  readonly name: "normalize";
34
34
  readonly humanReadableName: "normalize";
35
35
  readonly description: "Normalize the AST to flowR's AST";
36
36
  readonly processor: (results: {
37
- parse?: import("../../../core/steps/all/core/00-parse").ParseStepOutput;
37
+ parse?: import("../../../r-bridge/parser").ParseStepOutput<string>;
38
38
  }, input: Partial<import("../../../core/steps/all/core/10-normalize").NormalizeRequiredInput>) => NormalizedAst<import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").ParentInformation, import("../../../r-bridge/lang-4.x/ast/model/model").RNode<import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").ParentInformation>>;
39
39
  readonly executed: import("../../../core/steps/pipeline-step").PipelineStepStage.OncePerFile;
40
40
  readonly printer: {
@@ -52,6 +52,7 @@ export declare const NormalizedAstQueryDefinition: {
52
52
  normalize?: NormalizedAst;
53
53
  }, input: {
54
54
  request?: import("../../../r-bridge/retriever").RParseRequests;
55
+ parser?: import("../../../r-bridge/parser").Parser<import("../../../r-bridge/parser").KnownParserType>;
55
56
  }) => import("../../../dataflow/info").DataflowInformation;
56
57
  readonly requiredInput: {};
57
58
  readonly name: "dataflow";
package/queries/catalog/search-query/search-query-format.d.ts CHANGED
@@ -19,7 +19,7 @@ export declare const SearchQueryDefinition: {
19
19
  readonly name: "parse";
20
20
  readonly humanReadableName: "parse with R shell";
21
21
  readonly description: "Parse the given R code into an AST";
22
- readonly processor: (_results: unknown, input: Partial<import("../../../core/steps/all/core/00-parse").ParseRequiredInput>) => Promise<import("../../../core/steps/all/core/00-parse").ParseStepOutput>;
22
+ readonly processor: (_results: unknown, input: Partial<import("../../../r-bridge/parser").ParseRequiredInput<string>>) => Promise<import("../../../r-bridge/parser").ParseStepOutput<string>>;
23
23
  readonly executed: import("../../../core/steps/pipeline-step").PipelineStepStage.OncePerFile;
24
24
  readonly printer: {
25
25
  readonly 0: typeof import("../../../core/print/print").internalPrinter;
@@ -27,16 +27,16 @@ export declare const SearchQueryDefinition: {
27
27
  (value: any, replacer?: (this: any, key: string, value: any) => any, space?: string | number): string;
28
28
  (value: any, replacer?: (number | string)[] | null, space?: string | number): string;
29
29
  };
30
- readonly 5: ({ parsed }: import("../../../core/steps/all/core/00-parse").ParseStepOutput, config: import("../../../util/quads").QuadSerializationConfiguration) => string;
30
+ readonly 5: ({ parsed }: import("../../../r-bridge/parser").ParseStepOutput<string>, config: import("../../../util/quads").QuadSerializationConfiguration) => string;
31
31
  };
32
32
  readonly dependencies: readonly [];
33
- readonly requiredInput: import("../../../core/steps/all/core/00-parse").ParseRequiredInput;
33
+ readonly requiredInput: import("../../../r-bridge/parser").ParseRequiredInput<string>;
34
34
  } | {
35
35
  readonly name: "normalize";
36
36
  readonly humanReadableName: "normalize";
37
37
  readonly description: "Normalize the AST to flowR's AST";
38
38
  readonly processor: (results: {
39
- parse?: import("../../../core/steps/all/core/00-parse").ParseStepOutput;
39
+ parse?: import("../../../r-bridge/parser").ParseStepOutput<string>;
40
40
  }, input: Partial<import("../../../core/steps/all/core/10-normalize").NormalizeRequiredInput>) => import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").NormalizedAst<import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").ParentInformation, import("../../../r-bridge/lang-4.x/ast/model/model").RNode<import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").ParentInformation>>;
41
41
  readonly executed: import("../../../core/steps/pipeline-step").PipelineStepStage.OncePerFile;
42
42
  readonly printer: {
@@ -54,6 +54,7 @@ export declare const SearchQueryDefinition: {
54
54
  normalize?: import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").NormalizedAst;
55
55
  }, input: {
56
56
  request?: import("../../../r-bridge/retriever").RParseRequests;
57
+ parser?: import("../../../r-bridge/parser").Parser<import("../../../r-bridge/parser").KnownParserType>;
57
58
  }) => import("../../../dataflow/info").DataflowInformation;
58
59
  readonly requiredInput: {};
59
60
  readonly name: "dataflow";
package/queries/catalog/static-slice-query/static-slice-query-format.d.ts CHANGED
@@ -30,7 +30,7 @@ export declare const StaticSliceQueryDefinition: {
30
30
  readonly name: "parse";
31
31
  readonly humanReadableName: "parse with R shell";
32
32
  readonly description: "Parse the given R code into an AST";
33
- readonly processor: (_results: unknown, input: Partial<import("../../../core/steps/all/core/00-parse").ParseRequiredInput>) => Promise<import("../../../core/steps/all/core/00-parse").ParseStepOutput>;
33
+ readonly processor: (_results: unknown, input: Partial<import("../../../r-bridge/parser").ParseRequiredInput<string>>) => Promise<import("../../../r-bridge/parser").ParseStepOutput<string>>;
34
34
  readonly executed: import("../../../core/steps/pipeline-step").PipelineStepStage.OncePerFile;
35
35
  readonly printer: {
36
36
  readonly 0: typeof import("../../../core/print/print").internalPrinter;
@@ -38,16 +38,16 @@ export declare const StaticSliceQueryDefinition: {
38
38
  (value: any, replacer?: (this: any, key: string, value: any) => any, space?: string | number): string;
39
39
  (value: any, replacer?: (number | string)[] | null, space?: string | number): string;
40
40
  };
41
- readonly 5: ({ parsed }: import("../../../core/steps/all/core/00-parse").ParseStepOutput, config: import("../../../util/quads").QuadSerializationConfiguration) => string;
41
+ readonly 5: ({ parsed }: import("../../../r-bridge/parser").ParseStepOutput<string>, config: import("../../../util/quads").QuadSerializationConfiguration) => string;
42
42
  };
43
43
  readonly dependencies: readonly [];
44
- readonly requiredInput: import("../../../core/steps/all/core/00-parse").ParseRequiredInput;
44
+ readonly requiredInput: import("../../../r-bridge/parser").ParseRequiredInput<string>;
45
45
  } | {
46
46
  readonly name: "normalize";
47
47
  readonly humanReadableName: "normalize";
48
48
  readonly description: "Normalize the AST to flowR's AST";
49
49
  readonly processor: (results: {
50
- parse?: import("../../../core/steps/all/core/00-parse").ParseStepOutput;
50
+ parse?: import("../../../r-bridge/parser").ParseStepOutput<string>;
51
51
  }, input: Partial<import("../../../core/steps/all/core/10-normalize").NormalizeRequiredInput>) => import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").NormalizedAst<import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").ParentInformation, import("../../../r-bridge/lang-4.x/ast/model/model").RNode<import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").ParentInformation>>;
52
52
  readonly executed: import("../../../core/steps/pipeline-step").PipelineStepStage.OncePerFile;
53
53
  readonly printer: {
@@ -65,6 +65,7 @@ export declare const StaticSliceQueryDefinition: {
65
65
  normalize?: import("../../../r-bridge/lang-4.x/ast/model/processing/decorate").NormalizedAst;
66
66
  }, input: {
67
67
  request?: import("../../../r-bridge/retriever").RParseRequests;
68
+ parser?: import("../../../r-bridge/parser").Parser<import("../../../r-bridge/parser").KnownParserType>;
68
69
  }) => import("../../../dataflow/info").DataflowInformation;
69
70
  readonly requiredInput: {};
70
71
  readonly name: "dataflow";