@dxworks/depinder 0.1.1

package/LICENSE

@@ -0,0 +1,201 @@
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package/README.md

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+# Dxworks depinder
+
+This project was generated using the `dxworks-template-node-ts` repository template.
+
+## Installation
+
+Use `npm` to install
+
+```shell
+npm i -g @dxworks/depinder
+```
+
+or, to use it from `dxw cli`:
+
+```shell
+dxw plugin i @dxworks/depinder
+```
+
+To check if the installation was successful, run:
+
+```shell
+depinder --version
+```
+
+## Configuration
+`Depinder` relies on `GitHub` and `Libraries.io` to get information about packages and known security vulnerabilities. In order to call these downstream services, you need to add two environment variables with the corresponding tokens:
+- `GH_TOKEN` should contain a `GitHub` token with the `read:packages` scope.
+- `LIBRARIES_IO_API_KEY` should contain the `Libraries.io` API Key.
+
+## Preprocess data
+If you want to run `Depinder` on a project that has not been processed by `Depminer` before, 
+you need to run the following command to generate the folder structure:
+
+```shell
+dxw depminer construct <path-to-dx-dependencies-folder> <path-to-exported-folder>
+```
+
+After doing this, some package managers will require some more post-processing, in order to generate the `dependency tree` or the `lock file`.
+
+### Maven
+To generate the `dependency tree` for a maven project, run the following command in each project (or root project in case they contain modules):
+
+```shell
+mvn dependency:tree -DoutputFile=deptree.txt
+```
+This command should create a `deptree.txt` file next to each `pom.xml` file.
+This file will be processed by MavenMiner to generate the a `pom.json` file, that corresponds to the expectations that the `Depinder` Java plugin has.
+
+
+### Gradle
+To generate the `dependency tree` for a gradle project, run the following command in each project (or root project in case they contain modules):
+
+```shell
+gradle dependencies --configuration compileClasspath > deptree.txt
+```
+This command should create a `deptree.txt` file next to each `build.gradle` file.
+This file will be processed by GradleMiner to generate the a `gradle.json` file, that corresponds to the expectations that the `Depinder` Java plugin has.
+
+## Usage
+The following commands can be used either as standalone, or with the `dxw` prefix ahead.
+
+### Cache command
+
+To check if the MongoDB cache is running:
+```shell
+depinder cache
+```
+
+To initalise the Redis cache:
+```shell
+depinder cache init
+```
+
+To start the MongoDB cache:
+```shell
+depinder cache start
+```
+
+To stop the MongoDB cache:
+```shell
+depinder cache stop
+```
+
+To see what is available in the cache, please visit the [Mongo Express Dashboard](http://localhost:8002/).
+
+### Analyse
+To analyse a project, run the following command:
+
+```shell
+depinder analyse <paths-to-analysed-project-folders> ... -r <path-to-results-folder>
+```
+This command gets as an argument multiple fully qualified folder paths and will automatically run all plugins that are available for the project's used languages 
+and export the results in the specified `results` folder.
+
+## Acknowledgements
+
+Packagist api calls were inspired by [packagist-api-client](https://www.npmjs.com/package/packagist-api-client).
+Depinder also uses some libraries from `Snyk.io` to parse dependency files.
+
+## Contributing
+
+Pull requests are welcome. For major changes, please open an issue first to discuss what you would like to change.
+
+Please make sure to update tests as appropriate.
+
+## License
+
+[Apache-2.0](https://choosealicense.com/licenses/apache)

package/dist/assets/depinder.docker-compose.yml

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+version: "3.8"
+
+services:
+#  redis-stack:
+#    image: redis/redis-stack:latest
+#    container_name: depinder-redis-stack
+#    ports:
+#      - "6379:6379"
+#      - "8001:8001"
+#    volumes:
+#      - depinder_redis_data:/data
+#    networks:
+#      - traefiknet
+#    labels:
+#      #### Labels define the behavior and rules of the traefik proxy for this container ####
+#      - "traefik.enable=true" # <== Enable traefik on itself to view dashboard and assign subdomain to view it
+#      - "traefik.http.routers.redis.rule=Host(`depinder.redisinsight.localhost`)" # <== Setting the domain for the dashboard
+#      - "traefik.http.routers.redis.service=redis" # <== Enabling the api to be a service to access
+#      - "traefik.http.services.redis.loadbalancer.server.port=8001" # <== Enabling the api to be a service to access
+#      - "traefik.docker.network=traefiknet"
+#      - "traefik.http.routers.redis.tls=true"
+#      - "traefik.http.routers.redis.tls.certresolver=default"
+
+  mongo:
+    image: mongo:latest
+    container_name: depinder-mongo
+    environment:
+      MONGO_INITDB_ROOT_USERNAME: root
+      MONGO_INITDB_ROOT_PASSWORD: secret
+    ports:
+      - "27018:27017"
+    volumes:
+      - depinder_mongo_data:/data/db
+      - ./init-mongo.js:/docker-entrypoint-initdb.d/init-mongo.js
+    networks:
+      - traefiknet
+
+  mongo-express:
+    image: mongo-express:latest
+    container_name: depinder-mongo-express
+    restart: unless-stopped
+    ports:
+      - "8002:8081"
+    environment:
+      ME_CONFIG_MONGODB_ADMINUSERNAME: root
+      ME_CONFIG_MONGODB_ADMINPASSWORD: secret
+      ME_CONFIG_MONGODB_URL: mongodb://root:secret@mongo:27017/
+    networks:
+      - traefiknet
+    labels:
+      - "traefik.enable=true"
+      - "traefik.http.routers.mongo-express.rule=Host(`depinder.mongoexpress.localhost`)"
+      - "traefik.http.routers.mongo-express.service=mongo-express"
+      - "traefik.http.services.mongo-express.loadbalancer.server.port=8081"
+      - "traefik.docker.network=traefiknet"
+      - "traefik.http.routers.mongo-express.tls=true"
+      - "traefik.http.routers.mongo-express.tls.certresolver=default"
+    depends_on:
+      - mongo
+
+volumes:
+#  depinder_redis_data:
+  depinder_mongo_data:
+
+networks:
+  traefiknet:
+    external: true
+

package/dist/assets/init-mongo.js

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+db = db.getSiblingDB('depinder')
+
+db.createUser(
+    {
+        user: 'depinder',
+        pwd: 'depinder',
+        roles: [
+            {
+                role: 'readWrite',
+                db: 'depinder',
+            },
+        ],
+    }
+)
+
+db.intialisationCollection.insert({ initialized: true });

package/dist/assets/init-mongo.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"init-mongo.js","sourceRoot":"","sources":["../../src/assets/init-mongo.js"],"names":[],"mappings":";AAAA,EAAE,GAAG,EAAE,CAAC,YAAY,CAAC,UAAU,CAAC,CAAA;AAEhC,EAAE,CAAC,UAAU,CACT;IACI,IAAI,EAAE,UAAU;IAChB,GAAG,EAAE,UAAU;IACf,KAAK,EAAE;QACH;YACI,IAAI,EAAE,WAAW;YACjB,EAAE,EAAE,UAAU;SACjB;KACJ;CACJ,CACJ,CAAA;AAED,EAAE,CAAC,uBAAuB,CAAC,MAAM,CAAC,EAAE,WAAW,EAAE,IAAI,EAAE,CAAC,CAAC"}

package/dist/cache/cache.d.ts

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+import { LibraryInfo } from '../extension-points/registrar';
+export interface Cache {
+    get: (key: string) => LibraryInfo | Promise<LibraryInfo> | undefined | any;
+    set: (key: string, value: LibraryInfo) => void | Promise<void>;
+    has: (key: string) => boolean | Promise<boolean>;
+    load: () => void | Promise<void>;
+    write: () => void | Promise<void>;
+}
+export declare const noCache: Cache;

package/dist/cache/cache.js

@@ -0,0 +1,18 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.noCache = void 0;
+exports.noCache = {
+    get(key) {
+        return undefined;
+    },
+    set(key, value) {
+    },
+    has(key) {
+        return false;
+    },
+    load() {
+    },
+    write() {
+    },
+};
+//# sourceMappingURL=cache.js.map

package/dist/cache/cache.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"cache.js","sourceRoot":"","sources":["../../src/cache/cache.ts"],"names":[],"mappings":";;;AAUa,QAAA,OAAO,GAAU;IAC1B,GAAG,CAAC,GAAW;QACX,OAAO,SAAS,CAAA;IACpB,CAAC;IACD,GAAG,CAAC,GAAW,EAAE,KAAkB;IAEnC,CAAC;IACD,GAAG,CAAC,GAAW;QACX,OAAO,KAAK,CAAA;IAChB,CAAC;IACD,IAAI;IACJ,CAAC;IACD,KAAK;IACL,CAAC;CACJ,CAAA"}

package/dist/cache/json-cache.d.ts

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+import { Cache } from './cache';
+export declare const jsonCache: Cache;

package/dist/cache/json-cache.js

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+"use strict";
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.jsonCache = void 0;
+const path_1 = __importDefault(require("path"));
+const fs_1 = __importDefault(require("fs"));
+const CACHE_FILE_NAME = 'libs.json';
+function loadCache() {
+    const cacheFile = path_1.default.resolve(process.cwd(), 'cache', CACHE_FILE_NAME);
+    if (!fs_1.default.existsSync(cacheFile)) {
+        fs_1.default.mkdirSync(path_1.default.resolve(process.cwd(), 'cache'), { recursive: true });
+        fs_1.default.writeFileSync(cacheFile, '{}');
+    }
+    const json = JSON.parse(fs_1.default.readFileSync(cacheFile, 'utf8').toString());
+    return new Map(Object.entries(json));
+}
+let libMap;
+exports.jsonCache = {
+    get(key) {
+        if (!libMap) {
+            this.load();
+        }
+        return libMap.get(key);
+    }, set(key, value) {
+        if (!libMap) {
+            this.load();
+        }
+        libMap.set(key, value);
+    },
+    has(key) {
+        if (!libMap) {
+            this.load();
+        }
+        return libMap.has(key);
+    },
+    write() {
+        fs_1.default.writeFileSync(path_1.default.resolve(process.cwd(), 'cache', 'libs.json'), JSON.stringify(Object.fromEntries(libMap)));
+    },
+    load() {
+        libMap = loadCache();
+    },
+};
+//# sourceMappingURL=json-cache.js.map

package/dist/cache/json-cache.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"json-cache.js","sourceRoot":"","sources":["../../src/cache/json-cache.ts"],"names":[],"mappings":";;;;;;AACA,gDAAuB;AACvB,4CAAmB;AAGnB,MAAM,eAAe,GAAG,WAAW,CAAA;AAEnC,SAAS,SAAS;IACd,MAAM,SAAS,GAAG,cAAI,CAAC,OAAO,CAAC,OAAO,CAAC,GAAG,EAAE,EAAE,OAAO,EAAE,eAAe,CAAC,CAAA;IACvE,IAAG,CAAC,YAAE,CAAC,UAAU,CAAC,SAAS,CAAC,EAAE;QAC1B,YAAE,CAAC,SAAS,CAAC,cAAI,CAAC,OAAO,CAAC,OAAO,CAAC,GAAG,EAAE,EAAE,OAAO,CAAC,EAAE,EAAC,SAAS,EAAE,IAAI,EAAC,CAAC,CAAA;QACrE,YAAE,CAAC,aAAa,CAAC,SAAS,EAAE,IAAI,CAAC,CAAA;KACpC;IACD,MAAM,IAAI,GAAG,IAAI,CAAC,KAAK,CAAC,YAAE,CAAC,YAAY,CAAC,SAAS,EAAE,MAAM,CAAC,CAAC,QAAQ,EAAE,CAAC,CAAA;IACtE,OAAO,IAAI,GAAG,CAAC,MAAM,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC,CAAA;AACxC,CAAC;AAED,IAAI,MAAgC,CAAA;AACvB,QAAA,SAAS,GAAU;IAC5B,GAAG,CAAC,GAAW;QACX,IAAI,CAAC,MAAM,EAAE;YACT,IAAI,CAAC,IAAI,EAAE,CAAA;SACd;QACD,OAAO,MAAM,CAAC,GAAG,CAAC,GAAG,CAAC,CAAA;IAC1B,CAAC,EAAE,GAAG,CAAC,GAAW,EAAE,KAAU;QAC1B,IAAI,CAAC,MAAM,EAAE;YACT,IAAI,CAAC,IAAI,EAAE,CAAA;SACd;QACD,MAAM,CAAC,GAAG,CAAC,GAAG,EAAE,KAAK,CAAC,CAAA;IAC1B,CAAC;IACD,GAAG,CAAC,GAAW;QACX,IAAI,CAAC,MAAM,EAAE;YACT,IAAI,CAAC,IAAI,EAAE,CAAA;SACd;QACD,OAAO,MAAM,CAAC,GAAG,CAAC,GAAG,CAAC,CAAA;IAC1B,CAAC;IACD,KAAK;QACD,YAAE,CAAC,aAAa,CAAC,cAAI,CAAC,OAAO,CAAC,OAAO,CAAC,GAAG,EAAE,EAAE,OAAO,EAAE,WAAW,CAAC,EAAE,IAAI,CAAC,SAAS,CAAC,MAAM,CAAC,WAAW,CAAC,MAAM,CAAC,CAAC,CAAC,CAAA;IACnH,CAAC;IACD,IAAI;QACA,MAAM,GAAG,SAAS,EAAE,CAAA;IACxB,CAAC;CACJ,CAAA"}

package/dist/cache/mongo-cache.d.ts

@@ -0,0 +1,5 @@
+import { Cache } from './cache';
+import { Model } from 'mongoose';
+import { LibraryInfo } from '../extension-points/registrar';
+export declare const LibraryInfoModel: Model<LibraryInfo>;
+export declare const mongoCache: Cache;

package/dist/cache/mongo-cache.js

@@ -0,0 +1,97 @@
+"use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || function (mod) {
+    if (mod && mod.__esModule) return mod;
+    var result = {};
+    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
+    __setModuleDefault(result, mod);
+    return result;
+};
+var _a, _b, _c;
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.mongoCache = exports.LibraryInfoModel = void 0;
+const mongoose_1 = __importStar(require("mongoose"));
+const LibraryVersionSchema = new mongoose_1.Schema({
+    version: String,
+    timestamp: Number,
+    licenses: mongoose_1.Schema.Types.Mixed,
+    downloads: Number,
+    latest: Boolean,
+});
+const VulnerabilitySchema = new mongoose_1.Schema({
+    severity: String,
+    score: Number,
+    description: String,
+    summary: String,
+    timestamp: Number,
+    permalink: String,
+    identifiers: [mongoose_1.Schema.Types.Mixed],
+    references: [mongoose_1.Schema.Types.Mixed],
+    vulnerableRange: String,
+    vulnerableVersions: String,
+    firstPatchedVersion: String,
+});
+const LibraryInfoSchema = new mongoose_1.Schema({
+    _id: String,
+    name: { type: String, required: true },
+    description: String,
+    versions: [LibraryVersionSchema],
+    licenses: [String],
+    keywords: [String],
+    issuesUrl: [String],
+    reposUrl: [String],
+    homepageUrl: [String],
+    documentationUrl: [String],
+    packageUrl: [String],
+    downloads: Number,
+    authors: [String],
+    vulnerabilities: [VulnerabilitySchema],
+    requiresLicenseAcceptance: Boolean,
+}, { timestamps: true });
+exports.LibraryInfoModel = mongoose_1.default.model('LibraryInfo', LibraryInfoSchema);
+const MONGO_USER = (_a = process.env.MONGO_USER) !== null && _a !== void 0 ? _a : 'root';
+const MONGO_PASSWORD = (_b = process.env.MONGO_PASSWORD) !== null && _b !== void 0 ? _b : 'secret';
+const DATABASE_NAME = 'depinder';
+const MONGO_URI = (_c = process.env.MONGO_URI) !== null && _c !== void 0 ? _c : `mongodb://localhost:27018/${DATABASE_NAME}`;
+exports.mongoCache = {
+    async get(key) {
+        return await exports.LibraryInfoModel.findById(key).exec();
+    },
+    async set(key, value) {
+        await exports.LibraryInfoModel.findByIdAndUpdate(key, value, { upsert: true }).exec();
+    },
+    async has(key) {
+        return (await exports.LibraryInfoModel.exists({ _id: key }) !== null);
+    },
+    async load() {
+        if (mongoose_1.default.connection.readyState === 0) {
+            await mongoose_1.default.connect(MONGO_URI, {
+                dbName: DATABASE_NAME,
+                user: MONGO_USER,
+                pass: MONGO_PASSWORD,
+                authSource: 'admin',
+            });
+        }
+    },
+    async write() {
+        if (mongoose_1.default.connection.readyState === 1) {
+            await mongoose_1.default.disconnect();
+        }
+    },
+};
+//# sourceMappingURL=mongo-cache.js.map

package/dist/cache/mongo-cache.js.map

@@ -0,0 +1 @@
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package/dist/commands/analyse.d.ts

@@ -0,0 +1,8 @@
+import { Command } from 'commander';
+export interface AnalyseOptions {
+    plugins?: string[];
+    results: string;
+    refresh: boolean;
+}
+export declare const analyseCommand: Command;
+export declare function analyseFiles(folders: string[], options: AnalyseOptions, useCache?: boolean): Promise<void>;