@dxos/plugin-script 0.8.4-main.3fbcb4aa9b → 0.8.4-main.4668b7de9b

package/src/templates/commentary.ts

@@ -12,11 +12,10 @@ import * as Option from 'effect/Option';
 import * as Schema from 'effect/Schema';
 
 import { AiService, ConsolePrinter, ToolExecutionService, ToolResolverService } from '@dxos/ai';
+import { RootCollectionAnnotation } from '@dxos/app-toolkit';
 import { AiRequest, GenerationObserver } from '@dxos/assistant';
-import { ArtifactId } from '@dxos/assistant';
 import { Trace, Operation, OperationRegistry } from '@dxos/compute';
-import { Database, Filter, Obj, Ref, Relation } from '@dxos/echo';
-import { Collection } from '@dxos/echo';
+import { Annotation, Collection, Database, DXN, Filter, Obj, Ref, Relation, URI } from '@dxos/echo';
 import { createDocAccessor } from '@dxos/echo-db';
 import { log } from '@dxos/log';
 import { Chess } from '@dxos/plugin-chess';
@@ -28,7 +27,7 @@ import { trim } from '@dxos/util';
 
 const Commentary = Operation.make({
   meta: {
-    key: 'org.dxos.function.chess.commentary',
+    key: DXN.make('org.dxos.function.chess.commentary'),
     name: 'Commentary',
     description: 'Adds commentary about the most recent move to a markdown document associated with the chess game.',
   },
@@ -39,7 +38,7 @@ const Commentary = Operation.make({
   }),
   output: Schema.Union(
     Schema.Struct({
-      documentId: ArtifactId.annotations({
+      documentId: URI.Schema.annotations({
         description: 'The ID of the markdown document that was updated or created.',
       }),
       commentary: Schema.String.annotations({
@@ -85,7 +84,7 @@ export default Commentary.pipe(
         const moveNotation = lastMove.san;
 
         // Generate AI commentary about the move
-        const result = yield* new AiRequest({
+        const result = yield* new AiRequest.Request({
           observer: GenerationObserver.fromPrinter(new ConsolePrinter({ tag: 'chess-commentary' })),
         }).run({
           prompt:
@@ -126,10 +125,10 @@ export default Commentary.pipe(
               // TODO(wittjosiah): This is a workaround for getTarget not handling deleted objects.
               try {
                 log.info('relation', {
-                  source: Obj.getDXN(Relation.getTarget(relation)).toString(),
-                  game: Obj.getDXN(chessGame).toString(),
+                  source: Obj.getURI(Relation.getTarget(relation)),
+                  game: Obj.getURI(chessGame),
                 });
-                return Obj.getDXN(Relation.getTarget(relation)).toString() === Obj.getDXN(chessGame).toString();
+                return Obj.getURI(Relation.getTarget(relation)) === Obj.getURI(chessGame);
               } catch {
                 return false;
               }
@@ -159,9 +158,10 @@ export default Commentary.pipe(
         if (docs.length === 0) {
           // TODO(wittjosiah): Deploy fails if `SpaceProperties` schema is imported because its from `client-protocol`.
           const [properties] = yield* Database.runQuery(Filter.typename('org.dxos.type.spaceProperties'));
-          const rootCollection = yield* Database.load<Collection.Collection>(
-            properties[Collection.Collection.typename],
-          );
+          const rootCollectionRef = Annotation.get(properties, RootCollectionAnnotation).pipe(Option.getOrUndefined);
+          const rootCollection = rootCollectionRef
+            ? yield* Database.load<Collection.Collection>(rootCollectionRef)
+            : undefined;
 
           log.info('rootCollection', { rootCollection });
 
@@ -175,9 +175,11 @@ export default Commentary.pipe(
           );
 
           const documentRef = Ref.make(document);
-          Obj.update(rootCollection, (rootCollection) => {
-            rootCollection.objects.push(documentRef);
-          });
+          if (rootCollection) {
+            Obj.update(rootCollection, (rootCollection) => {
+              rootCollection.objects.push(documentRef);
+            });
+          }
 
           // Create the HasSubject relation
           yield* Database.add(
@@ -198,12 +200,12 @@ export default Commentary.pipe(
           });
         }
 
-        log.info('result', { documentId: Obj.getDXN(document).toString(), commentary });
+        log.info('result', { documentId: Obj.getURI(document), commentary });
 
         yield* Database.flush();
 
         return {
-          documentId: Obj.getDXN(document).toString(),
+          documentId: Obj.getURI(document),
           commentary,
         };
       },

package/src/templates/data-generator.ts

@@ -23,7 +23,7 @@ export default defineFunction({
     data: { documentAmount = 1, textSize = 10, mutationAmount = 0, waitAfterCreation = 10_000 },
     context: { space },
   }: any) => {
-    await space.db.graph.schemaRegistry.register([Expando]);
+    space.db.graph.registry.add([Expando]);
     const result: Record<string, any> = {};
     const objects: Expando[] = [];
 

package/src/templates/discord.ts

@@ -3,7 +3,7 @@
 //
 
 // @ts-ignore
-import { DXN, EchoObject, Filter, ObjectId, S, create, defineFunction } from 'dxos:functions';
+import { DXN, EchoObject, Filter, EntityId, S, create, defineFunction } from 'dxos:functions';
 // @ts-ignore
 import { FetchHttpClient } from 'https://esm.sh/@effect/platform@0.89.0?deps=effect@3.17.0&bundle=false';
 import {
@@ -22,7 +22,7 @@ import * as Redacted from 'https://esm.sh/effect@3.17.0/Redacted?bundle=false';
 import * as Ref from 'https://esm.sh/effect@3.17.0/Ref?bundle=false';
 
 const MessageSchema = S.Struct({
-  id: ObjectId,
+  id: EntityId,
   foreignId: S.Any, // bigint?
   from: S.String,
   created: S.String,
@@ -64,7 +64,7 @@ export default defineFunction({
         catch: (e: any) => e,
       });
       const { objects } = yield* Effect.tryPromise({
-        try: () => space.queues.queryQueue(DXN.parse(queueId)),
+        try: () => space.queues.queryQueue(DXN.tryMake(queueId)!),
         catch: (e: any) => e,
       });
       const backfill = objects.length === 0;
@@ -84,7 +84,7 @@ export default defineFunction({
           const queueMessages = messages
             .map((message: any) =>
               create(MessageSchema, {
-                id: ObjectId.random(),
+                id: EntityId.random(),
                 foreignId: message.id,
                 from: message.author.username,
                 created: message.timestamp,
@@ -94,7 +94,7 @@ export default defineFunction({
             .toReversed();
           if (queueMessages.length > 0) {
             yield* Effect.tryPromise({
-              try: () => space.queues.insertIntoQueue(DXN.parse(queueId), queueMessages),
+              try: () => space.queues.insertIntoQueue(DXN.tryMake(queueId)!, queueMessages),
               catch: (e: any) => e,
             });
             yield* Ref.update(newMessages, (n: any) => n + queueMessages.length);

package/src/templates/forex-effect.ts

@@ -10,10 +10,11 @@ import * as Schedule from 'effect/Schedule';
 import * as Schema from 'effect/Schema';
 
 import { Operation } from '@dxos/compute';
+import { DXN } from '@dxos/keys';
 
 const ForexEffect = Operation.make({
   meta: {
-    key: 'org.dxos.script.forex-effect',
+    key: DXN.make('org.dxos.script.forexEffect'),
     name: 'Forex Effect',
     description: 'Returns the exchange rate between two currencies.',
   },

package/src/templates/forex.ts

@@ -6,10 +6,11 @@ import * as Effect from 'effect/Effect';
 import * as Schema from 'effect/Schema';
 
 import { Operation } from '@dxos/compute';
+import { DXN } from '@dxos/keys';
 
 const Forex = Operation.make({
   meta: {
-    key: 'org.dxos.script.forex',
+    key: DXN.make('org.dxos.script.forex'),
     name: 'Forex',
     description: 'Returns the exchange rate between two currencies.',
   },

package/src/templates/gmail.ts

@@ -3,7 +3,7 @@
 //
 
 // @ts-ignore
-import { EchoObject, Filter, ObjectId, S, create, defineFunction } from 'dxos:functions';
+import { EchoObject, Filter, EntityId, S, create, defineFunction } from 'dxos:functions';
 // @ts-ignore
 import {
   FetchHttpClient,
@@ -74,7 +74,7 @@ export default defineFunction({
         catch: (e: any) => e,
       });
       const { objects } = yield* Effect.tryPromise({
-        try: () => space.queues.queryQueue(mailbox.queue.dxn),
+        try: () => space.queues.queryQueue(mailbox.queue.uri),
         catch: (e: any) => e,
       });
       const newMessages = yield* Ref.make([]);
@@ -105,7 +105,7 @@ export default defineFunction({
           }
           const subject = messageDetails.payload.headers.find((h: any) => h.name === 'Subject')?.value;
           const object = create(MessageType, {
-            id: ObjectId.random(),
+            id: EntityId.random(),
             created,
             sender,
             blocks: [
@@ -132,7 +132,7 @@ export default defineFunction({
           Stream.grouped(10),
           Stream.flatMap((batch: any) =>
             Effect.tryPromise({
-              try: () => space.queues.insertIntoQueue(mailbox.queue.dxn, Chunk.toReadonlyArray(batch)),
+              try: () => space.queues.insertIntoQueue(mailbox.queue.uri, Chunk.toReadonlyArray(batch)),
               catch: (e: any) => e,
             }),
           ),
@@ -197,7 +197,7 @@ const Text = S.TaggedStruct('text', {
 interface Text extends S.Schema.Type<typeof Text> {}
 
 const MessageType = S.Struct({
-  id: ObjectId,
+  id: EntityId,
   created: S.String.annotations({
     description: 'ISO date string when the message was sent.',
   }),

package/src/templates/index.ts

@@ -3,7 +3,6 @@
 //
 
 import anthropic from './anthropic.ts?raw';
-import chat from './chat.ts?raw';
 import chessBot from './chess-bot.ts?raw';
 import commentary from './commentary.ts?raw';
 import dataGenerator from './data-generator.ts?raw';
@@ -41,12 +40,6 @@ export const templates = [
     name: 'Forex (Effect)',
     source: removeHeader(forexEffect),
   },
-  {
-    id: 'org.dxos.script.gpt',
-    name: 'Gpt',
-    source: removeHeader(chat),
-    presetId: 'org.dxos.function.gpt',
-  },
   {
     id: 'org.dxos.script.chess-bot',
     name: 'Chess Bot',

package/src/templates/ping.ts

@@ -6,10 +6,11 @@ import * as Effect from 'effect/Effect';
 import * as Schema from 'effect/Schema';
 
 import { Operation } from '@dxos/compute';
+import { DXN } from '@dxos/keys';
 
 const Ping = Operation.make({
   meta: {
-    key: 'org.dxos.script.ping',
+    key: DXN.make('org.dxos.script.ping'),
     name: 'Ping',
   },
   input: Schema.Any,

package/src/testing/test-notebook.ts

@@ -3,7 +3,7 @@
 //
 
 import { Routine } from '@dxos/compute';
-import { Ref } from '@dxos/echo';
+import { Ref, Type } from '@dxos/echo';
 import { createObject } from '@dxos/echo-db';
 import { PublicKey } from '@dxos/keys';
 import { Markdown } from '@dxos/plugin-markdown';
@@ -54,7 +54,7 @@ export const createNotebook = (): Notebook.Notebook =>
       {
         id: PublicKey.random().toString(),
         type: 'query',
-        source: Ref.make(createObject(Text.make({ content: `docs = (type: ${Markdown.Document.typename})` }))),
+        source: Ref.make(createObject(Text.make({ content: `docs = (type: ${Type.getTypename(Markdown.Document)})` }))),
       },
       {
         id: PublicKey.random().toString(),

package/src/testing/test-script.ts

@@ -18,9 +18,8 @@ export const createScript = (space: Space): Script.Script => {
   space.db.add(script);
   space.db.add(
     Obj.make(Operation.PersistentOperation, {
-      key: 'org.dxos.script.story-fn',
+      [Obj.Meta]: { key: 'org.dxos.script.story-fn', version: '0.1.0' },
       name: 'Test',
-      version: '0.1.0',
       source: Ref.make(script),
     }),
   );

package/src/translations.ts

@@ -3,6 +3,7 @@
 //
 
 import { Script } from '@dxos/compute';
+import { Type } from '@dxos/echo';
 import { type Resource } from '@dxos/react-ui';
 
 import { meta } from '#meta';
@@ -11,7 +12,7 @@ import { Notebook } from '#types';
 export const translations = [
   {
     'en-US': {
-      [Script.Script.typename]: {
+      [Type.getTypename(Script.Script)]: {
         'typename.label': 'Script',
         'typename.label_zero': 'Scripts',
         'typename.label_one': 'Script',
@@ -22,7 +23,7 @@ export const translations = [
         'delete-object.label': 'Delete script',
         'object-deleted.label': 'Script deleted',
       },
-      [Notebook.Notebook.typename]: {
+      [Type.getTypename(Notebook.Notebook)]: {
         'typename.label': 'Notebook',
         'typename.label_zero': 'Notebooks',
         'typename.label_one': 'Notebook',

package/src/types/Notebook.ts

@@ -5,7 +5,7 @@
 import * as Schema from 'effect/Schema';
 
 import { Routine } from '@dxos/compute';
-import { Annotation, Obj, Ref, Type } from '@dxos/echo';
+import { DXN, Annotation, Obj, Ref, Type } from '@dxos/echo';
 import { FormInputAnnotation } from '@dxos/echo/internal';
 import { LabelAnnotation } from '@dxos/echo/internal';
 import { Graph } from '@dxos/plugin-explorer';
@@ -23,23 +23,17 @@ export const Cell = Schema.Struct({
   graph: Schema.optional(Ref.Ref(Graph.Graph)),
 });
 
-export interface Cell extends Schema.Schema.Type<typeof Cell> {}
+export type Cell = Schema.Schema.Type<typeof Cell>;
 
 export const Notebook = Schema.Struct({
   name: Schema.String.pipe(Schema.optional),
   cells: Cell.pipe(Schema.Array, FormInputAnnotation.set(false)),
 }).pipe(
-  Type.object({
-    typename: 'org.dxos.type.notebook',
-    version: '0.1.0',
-  }),
   LabelAnnotation.set(['name']),
-  Annotation.IconAnnotation.set({
-    icon: 'ph--notebook--regular',
-    hue: 'sky',
-  }),
+  Annotation.IconAnnotation.set({ icon: 'ph--notebook--regular', hue: 'sky' }),
+  Type.makeObject(DXN.make('org.dxos.type.notebook', '0.1.0')),
 );
 
-export type Notebook = Schema.Schema.Type<typeof Notebook>;
+export type Notebook = Type.InstanceType<typeof Notebook>;
 
 export const make = (props: Obj.MakeProps<typeof Notebook> = { cells: [] }): Notebook => Obj.make(Notebook, props);

package/src/types/ScriptOperation.ts

@@ -7,13 +7,13 @@
 import * as Schema from 'effect/Schema';
 
 import { Script, Operation } from '@dxos/compute';
-import { Database } from '@dxos/echo';
+import { Database, Type, DXN } from '@dxos/echo';
 
 import { meta } from '#meta';
 
 import { templates } from '../templates';
 
-const SCRIPT_OPERATION = `${meta.id}.operation`;
+const makeKey = (name: string) => DXN.make(`${meta.id}.operation.${name}`);
 
 export const ScriptProps = Schema.Struct({
   name: Schema.optional(Schema.String),
@@ -29,7 +29,7 @@ export const NotebookProps = Schema.Struct({
 });
 
 export const CreateScript = Operation.make({
-  meta: { key: `${SCRIPT_OPERATION}.create-script`, name: 'Create Script' },
+  meta: { key: makeKey('createScript'), name: 'Create Script', icon: 'ph--code--regular' },
   input: Schema.extend(
     ScriptProps,
     Schema.Struct({
@@ -37,6 +37,6 @@ export const CreateScript = Operation.make({
     }),
   ),
   output: Schema.Struct({
-    object: Script.Script,
+    object: Type.getSchema(Script.Script),
   }),
 });

package/src/util/deploy.ts

@@ -55,7 +55,7 @@ export const deployScript = async ({
     const newFunction = await functionsServiceClient.deploy(Context.default(), {
       // TODO(dmaretskyi): Space key or identity key.
       ownerPublicKey: space.key,
-      version: fn ? incrementSemverPatch(fn.version) : '0.0.1',
+      version: fn ? incrementSemverPatch(Obj.getMeta(fn).version ?? '0.0.0') : '0.0.1',
       functionId: existingFunctionId,
       entryPoint: buildResult.entryPoint,
       assets: buildResult.assets,

package/src/util/functions.ts

@@ -9,7 +9,7 @@ import { getInvocationUrl } from '@dxos/functions-runtime';
 import { type PublicKey } from '@dxos/keys';
 import { log } from '@dxos/log';
 import { type Credential } from '@dxos/protocols/proto/dxos/halo/credentials';
-import { getSpace } from '@dxos/react-client/echo';
+
 /**
  * Get the function URL for a given script and client configuration
  */
@@ -22,7 +22,7 @@ export const getFunctionUrl = ({
   fn: any;
   edgeUrl: string;
 }): string | undefined => {
-  const space = getSpace(script);
+  const spaceId = Obj.getDatabase(script)?.spaceId;
   const existingFunctionId = fn && getUserFunctionIdInMetadata(Obj.getMeta(fn));
 
   if (!existingFunctionId) {
@@ -30,7 +30,7 @@ export const getFunctionUrl = ({
   }
 
   return getInvocationUrl(existingFunctionId, edgeUrl, {
-    spaceId: space?.id,
+    spaceId,
   });
 };
 
@@ -62,7 +62,7 @@ export const updateFunctionMetadata = (
     }
 
     if (meta.key) {
-      storedFunction.key = meta.key;
+      Obj.getMeta(storedFunction).key = meta.key;
     } else {
       log.verbose('no key in function metadata', { functionId });
     }

package/src/vite-env.d.ts

@@ -20,3 +20,8 @@ declare module '*?raw' {
 }
 
 declare module 'https://*';
+
+declare module '*.mdl?raw' {
+  const content: string;
+  export default content;
+}

package/dist/lib/neutral/NotebookContainer-FIAQI3A2.mjs.map

@@ -1,7 +0,0 @@
-{
-  "version": 3,
-  "sources": ["../../../src/containers/NotebookContainer/NotebookContainer.tsx", "../../../src/notebook/compute-graph.ts", "../../../src/notebook/eval.ts", "../../../src/notebook/vfs-parser.ts"],
-  "sourcesContent": ["//\n// Copyright 2025 DXOS.org\n//\n\nimport { RegistryContext } from '@effect-atom/atom-react';\nimport * as Cause from 'effect/Cause';\nimport * as Effect from 'effect/Effect';\nimport * as Exit from 'effect/Exit';\nimport type * as Types from 'effect/Types';\nimport React, { useCallback, useContext, useMemo, useState } from 'react';\n\nimport { type AppSurface } from '@dxos/app-toolkit/ui';\nimport { AgentPrompt } from '@dxos/assistant-toolkit';\nimport { Blueprint, Routine } from '@dxos/compute';\nimport { Operation } from '@dxos/compute';\nimport { Filter, Obj, Query, Ref } from '@dxos/echo';\nimport { QueryBuilder } from '@dxos/echo-query';\nimport { invariant } from '@dxos/invariant';\nimport { log } from '@dxos/log';\nimport { useComputeRuntimeCallback } from '@dxos/plugin-automation/hooks';\nimport { Graph } from '@dxos/plugin-explorer';\nimport { DropdownMenu, IconButton, Panel, Toolbar, useTranslation } from '@dxos/react-ui';\nimport { useAttention } from '@dxos/react-ui-attention';\nimport { Text, ViewModel } from '@dxos/schema';\nimport { isNonNullable } from '@dxos/util';\n\nimport { NotebookMenu, NotebookStack, type NotebookStackProps, type TypescriptEditorProps } from '#components';\nimport { meta } from '#meta';\nimport { type Notebook } from '#types';\n\nimport { ComputeGraph } from '../../notebook';\n\nconst INCLUDE_BLUEPRINTS = [\n  'org.dxos.blueprint.assistant',\n  'org.dxos.blueprint.database',\n  'org.dxos.blueprint.markdown',\n];\n\n// TODO(burdon): Support calling named deployed functions (as with sheet).\n\nexport type NotebookContainerProps = AppSurface.ObjectArticleProps<\n  Notebook.Notebook,\n  Pick<TypescriptEditorProps, 'env'>\n>;\n\nexport const NotebookContainer = ({ role, subject: notebook, attendableId, env }: NotebookContainerProps) => {\n  const { t } = useTranslation(meta.id);\n  const registry = useContext(RegistryContext);\n  const db = Obj.getDatabase(notebook);\n  const { hasAttention } = useAttention(attendableId);\n\n  // TODO(burdon): Consolidate execution and state (with graph).\n  //  Generalize ComputeGraph evaluation function (using effects).\n  const graph = useMemo(() => notebook && new ComputeGraph(notebook, registry), [notebook, registry]);\n\n  const [queryValues, setQueryValues] = useState<Record<string, any>>({});\n  const handleExecQueries = useCallback(async () => {\n    invariant(db);\n\n    const builder = new QueryBuilder();\n    for (const cell of notebook?.cells ?? []) {\n      if (cell.type === 'query') {\n        if (cell.source?.target) {\n          const source = cell.source.target.content;\n          const { name, filter } = builder.build(source);\n          if (filter) {\n            const ast = Query.select(filter).ast;\n            const graph = cell.graph?.target;\n            if (!graph) {\n              const { view } = await ViewModel.makeFromDatabase({ db });\n              const newGraph = Graph.make({ query: { ast }, view });\n              Obj.update(notebook!, (obj) => {\n                const c = obj.cells.find((c) => c.id === cell.id);\n                if (c) {\n                  c.graph = Ref.make(newGraph);\n                  c.name = name;\n                }\n              });\n            } else {\n              Obj.update(graph, (graph) => {\n                graph.query.ast = ast as Obj.Mutable<typeof ast>;\n              });\n            }\n          }\n        }\n\n        if (cell.name && cell.graph?.target) {\n          const graph = Obj.getSnapshot(cell.graph?.target);\n          const query = Query.fromAst(graph.query.ast);\n          const objects = await db.query(query).run();\n          const objectIds = objects?.map((obj) => obj.id);\n          setQueryValues((prev) => ({ ...prev, [cell.name!]: objectIds }));\n        }\n      }\n    }\n  }, [db, notebook, graph]);\n\n  const [promptResults, setPromptResults] = useState<Record<string, string>>({});\n  const handleExecPrompts = useComputeRuntimeCallback(\n    db?.spaceId,\n    Effect.fnUntraced(function* () {\n      invariant(graph);\n\n      const prompts =\n        notebook?.cells\n          .filter((cell) => cell.type === 'prompt')\n          .map((cell) => cell.prompt)\n          .filter(isNonNullable) ?? [];\n\n      for (const prompt of prompts) {\n        yield* runPrompt({\n          prompt,\n          input: { ...queryValues, ...graph.getValuesByName() },\n          onResult: (result) =>\n            setPromptResults((prev) => ({\n              ...prev,\n              [prompt.dxn.toString()]: result,\n            })),\n        });\n      }\n    }),\n    [notebook, graph, queryValues],\n  );\n\n  // TODO(burdon): Cache values in context (preserve when switched).\n  const handleCompute = useCallback(async () => {\n    // TODO(burdon): Generalize executors (dependencies).\n    await graph?.evaluate();\n    await handleExecQueries();\n    await handleExecPrompts();\n  }, [graph, handleExecQueries, handleExecPrompts]);\n\n  const handleRearrange = useCallback<NonNullable<NotebookStackProps['onRearrange']>>(\n    (source, target) => {\n      invariant(notebook);\n      const from = notebook.cells.findIndex((cell) => cell.id === source.id);\n      const to = notebook.cells.findIndex((cell) => cell.id === target.id);\n      if (from != null && to != null) {\n        Obj.update(notebook, (notebook) => {\n          const cell = notebook.cells.splice(from, 1)[0];\n          if (cell) {\n            notebook.cells.splice(to, 0, cell);\n          }\n        });\n      }\n    },\n    [notebook],\n  );\n\n  const handleCellInsert = useCallback<NonNullable<NotebookStackProps['onCellInsert']>>(\n    async (type, after) => {\n      invariant(notebook);\n      const cell: Types.Mutable<Notebook.Cell> = { id: crypto.randomUUID(), type };\n      switch (type) {\n        case 'markdown':\n        case 'script':\n        case 'query': {\n          cell.source = Ref.make(Text.make());\n          break;\n        }\n\n        case 'prompt': {\n          if (db) {\n            const objects = await db.query(Query.select(Filter.type(Blueprint.Blueprint))).run();\n            const blueprints = objects\n              .filter((blueprint) => INCLUDE_BLUEPRINTS.includes(blueprint.key))\n              .map((blueprint) => Ref.make(blueprint));\n            cell.prompt = Ref.make(Routine.make({ instructions: '', blueprints }));\n          }\n          break;\n        }\n      }\n\n      const idx = after ? notebook.cells.findIndex((cell) => cell.id === after) : notebook.cells.length;\n      Obj.update(notebook, (notebook) => {\n        notebook.cells.splice(idx, 0, cell);\n      });\n    },\n    [db, notebook],\n  );\n\n  const handleCellDelete = useCallback<NonNullable<NotebookStackProps['onCellDelete']>>(\n    (id) => {\n      invariant(notebook);\n      const idx = notebook.cells.findIndex((cell) => cell.id === id);\n      if (idx !== -1) {\n        Obj.update(notebook, (notebook) => {\n          notebook.cells.splice(idx, 1);\n        });\n      }\n    },\n    [notebook],\n  );\n\n  return (\n    <Panel.Root role={role} className='dx-document'>\n      <Panel.Toolbar asChild>\n        <Toolbar.Root disabled={!hasAttention}>\n          <DropdownMenu.Root>\n            <DropdownMenu.Trigger asChild>\n              <IconButton icon='ph--plus--regular' iconOnly label={t('notebook-cell-insert.label')} />\n            </DropdownMenu.Trigger>\n            <NotebookMenu onCellInsert={handleCellInsert} />\n          </DropdownMenu.Root>\n          <Toolbar.IconButton\n            icon='ph--play--fill'\n            iconOnly\n            label={t('compute.label')}\n            classNames='text-success-text'\n            onClick={handleCompute}\n          />\n        </Toolbar.Root>\n      </Panel.Toolbar>\n      <Panel.Content asChild>\n        <NotebookStack\n          db={db}\n          notebook={notebook}\n          graph={graph}\n          env={env}\n          promptResults={promptResults}\n          onRearrange={handleRearrange}\n          onCellInsert={handleCellInsert}\n          onCellDelete={handleCellDelete}\n        />\n      </Panel.Content>\n    </Panel.Root>\n  );\n};\n\n// TODO(wittjosiah): Factor out. Copied from PromptArticle in plugin-assistant.\nconst runPrompt = Effect.fn(function* ({\n  prompt,\n  input,\n  onResult,\n}: {\n  prompt: Ref.Ref<Routine.Routine>;\n  input: Record<string, any>;\n  onResult: (result: string) => void;\n}) {\n  const inputData: Operation.Definition.Input<typeof AgentPrompt> = { prompt, input };\n  // Invoke the function.\n  const result = yield* Operation.invoke(AgentPrompt, inputData).pipe(Effect.orDie, Effect.exit);\n\n  Exit.match(result, {\n    onFailure: (cause) => {\n      const error = Cause.prettyErrors(cause)[0];\n      log.error(error.message, error.cause ?? error.stack);\n      onResult(error.message);\n    },\n    onSuccess: (result: any) => {\n      onResult(result.note);\n    },\n  });\n});\n", "//\n// Copyright 2025 DXOS.org\n//\n\nimport { Atom, type Registry } from '@effect-atom/atom-react';\n\nimport { log } from '@dxos/log';\n\nimport { type Notebook } from '#types';\n\nimport { evalScript } from './eval';\nimport { type ParsedExpression, VirtualTypeScriptParser } from './vfs-parser';\n\n/**\n * Compute graph that evaluates the notebook cells.\n */\n// TODO(burdon): Reconcile with @dxos/conductor.\nexport class ComputeGraph {\n  private readonly _parser = new VirtualTypeScriptParser();\n\n  private _expressionsAtom = Atom.make<Record<string, ParsedExpression>>({});\n  private _valuesByCellIdAtom = Atom.make<Record<string, any>>({});\n  private _valuesByNameAtom = Atom.make<Record<string, any>>({});\n\n  constructor(\n    private readonly _notebook: Notebook.Notebook,\n    private readonly _registry: Registry.Registry,\n  ) {}\n\n  /**\n   * Atom for parsed expressions by cell ID.\n   */\n  get expressions(): Atom.Atom<Record<string, ParsedExpression>> {\n    return this._expressionsAtom;\n  }\n\n  /**\n   * Get current expressions by cell ID.\n   */\n  getExpressions(): Record<string, ParsedExpression> {\n    return this._registry.get(this._expressionsAtom);\n  }\n\n  /**\n   * Atom for computed values by cell ID.\n   */\n  get values(): Atom.Atom<Record<string, any>> {\n    return this._valuesByCellIdAtom;\n  }\n\n  /**\n   * Get computed values by cell ID.\n   */\n  getValues(): Record<string, any> {\n    return this._registry.get(this._valuesByCellIdAtom);\n  }\n\n  /**\n   * Atom for computed values by name.\n   */\n  get valuesByName(): Atom.Atom<Record<string, any>> {\n    return this._valuesByNameAtom;\n  }\n\n  /**\n   * Get current values by name.\n   */\n  getValuesByName(): Record<string, any> {\n    return this._registry.get(this._valuesByNameAtom);\n  }\n\n  /**\n   * Get computed value by cell ID.\n   */\n  getValue(cellId: string): any {\n    return this._registry.get(this._valuesByCellIdAtom)[cellId];\n  }\n\n  /**\n   * Compute values.\n   */\n  async evaluate() {\n    // Parse expressions.\n    const { expressions, dependencyGraph } = this.parse();\n    this._registry.set(this._valuesByCellIdAtom, {});\n    this._registry.set(this._valuesByNameAtom, {});\n\n    // Create a map of cell IDs to expressions for easy lookup.\n    const cellExpressions = new Map<string, ParsedExpression>();\n    Object.entries(expressions).forEach(([id, expr]) => {\n      cellExpressions.set(id, expr);\n    });\n\n    // Topological sort to determine evaluation order.\n    const evaluationOrder = this.topologicalSort(Object.keys(expressions), dependencyGraph);\n\n    // Values by reference name.\n    const valuesByName: Record<string, any> = {};\n    const valuesByCellId: Record<string, any> = {};\n\n    // Evaluate cells in dependency order.\n    for (const cellId of evaluationOrder) {\n      const expr = cellExpressions.get(cellId);\n      if (!expr) {\n        log.error('no expression for cell', { cellId });\n        continue;\n      }\n\n      const cellSource = this._notebook.cells.find((cell) => cell.id === cellId)?.source?.target?.content;\n      if (!cellSource) {\n        log.error('no source for cell', { cellId });\n        continue;\n      }\n\n      try {\n        // For assignments or declarations, evaluate and store the value.\n        if (expr.name && expr.value !== undefined) {\n          // If the parser extracted a literal value, use it directly.\n          valuesByName[expr.name] = expr.value;\n          valuesByCellId[cellId] = expr.value;\n        } else if (expr.name) {\n          // For non-literal assignments, we need to evaluate the expression.\n          // The parser identifies it's an assignment, so we can extract the RHS.\n          const equalIndex = cellSource.indexOf('=');\n          if (equalIndex !== -1) {\n            // Find the actual assignment operator (not in strings or other contexts).\n            let rhs = cellSource.substring(equalIndex + 1).trim();\n\n            // Handle semicolon at the end.\n            if (rhs.endsWith(';')) {\n              rhs = rhs.slice(0, -1).trim();\n            }\n\n            const result = await this.eval(rhs, valuesByName);\n            valuesByName[expr.name] = result;\n            if (typeof result !== 'function') {\n              valuesByCellId[cellId] = result;\n            }\n          }\n        } else {\n          // For expressions without assignment, just evaluate.\n          const result = await this.eval(cellSource, valuesByName);\n          valuesByCellId[cellId] = result;\n        }\n      } catch (error) {\n        // TODO(burdon): Set error state.\n        log.error('error evaluating cell', { cellId, error });\n      }\n    }\n\n    this._registry.set(this._valuesByCellIdAtom, valuesByCellId);\n    this._registry.set(this._valuesByNameAtom, valuesByName);\n    return valuesByCellId;\n  }\n\n  private async eval(source: string, values: Record<string, any>) {\n    return evalScript(source, values);\n  }\n\n  /**\n   * Parse expressions.\n   */\n  parse() {\n    const expressions = this._notebook.cells\n      .filter((cell) => cell.type === 'script')\n      .reduce<Record<string, ParsedExpression>>((acc, cell) => {\n        const text = cell.source?.target?.content.trim();\n        if (text) {\n          const parsed = this._parser.parseExpression(text);\n          acc[cell.id] = parsed;\n        }\n\n        return acc;\n      }, {});\n\n    // Build dependency graph.\n    const dependencyGraph = this.buildDependencyGraph(expressions);\n    this._registry.set(this._expressionsAtom, expressions);\n    return { expressions, dependencyGraph };\n  }\n\n  private topologicalSort(nodes: string[], dependencies: Record<string, string[]>): string[] {\n    const visited = new Set<string>();\n    const result: string[] = [];\n\n    const visit = (node: string) => {\n      if (visited.has(node)) {\n        return;\n      }\n\n      visited.add(node);\n\n      // Visit dependencies first.\n      const deps = dependencies[node] || [];\n      deps.forEach((dep) => visit(dep));\n      result.push(node);\n    };\n\n    // Visit all nodes.\n    nodes.forEach((node) => visit(node));\n    return result;\n  }\n\n  private buildDependencyGraph(expressions: Record<string, ParsedExpression>): Record<string, string[]> {\n    // Create a map of variable names to their cell IDs.\n    const nameToCellId = new Map<string, string>();\n    Object.entries(expressions).forEach(([id, expr]) => {\n      if (expr.name) {\n        nameToCellId.set(expr.name, id);\n      }\n    });\n\n    // Build the dependency graph using cell IDs.\n    const graph: Record<string, string[]> = {};\n    Object.entries(expressions).forEach(([id, expr]) => {\n      if (expr.references && expr.references.length > 0) {\n        // Map variable references to cell IDs.\n        const dependencyCellIds = expr.references\n          .map((ref) => nameToCellId.get(ref))\n          .filter((cellId): cellId is string => cellId !== undefined && cellId !== id);\n\n        if (dependencyCellIds.length > 0) {\n          graph[id] = dependencyCellIds;\n        }\n      }\n    });\n\n    return graph;\n  }\n}\n", "//\n// Copyright 2025 DXOS.org\n//\n\nimport { trim } from '@dxos/util';\n\n/**\n * Evaluate the script (with dependencies as arguments).\n */\nexport const evalScript = async (code: string, deps: Record<string, any> = {}) => {\n  // Create a sandboxed environment that blocks access to window and document.\n  const sandbox = {\n    ...deps,\n\n    // Block access to global objects.\n    console: undefined,\n    document: undefined,\n    global: undefined,\n    globalThis: undefined,\n    self: undefined,\n    window: undefined,\n\n    // Allow some safe globals.\n    Array,\n    Boolean,\n    Date,\n    Error,\n    JSON,\n    Map,\n    Math,\n    Number,\n    Object,\n    Promise,\n    RegExp,\n    Set,\n    String,\n\n    // Functions.\n    isFinite,\n    isNaN,\n    parseFloat,\n    parseInt,\n\n    // Note: undefined and null are not included as they are keywords, not variables.\n  };\n\n  // Create function with all sandbox keys as parameters.\n  const sandboxKeys = Object.keys(sandbox);\n  const sandboxValues = Object.values(sandbox);\n\n  // eslint-disable-next-line @typescript-eslint/no-implied-eval\n  const fn = new Function(\n    ...sandboxKeys,\n    trim`\n      'use strict';\n      return ${code};\n    `,\n  );\n\n  return fn(...sandboxValues);\n};\n\n/**\n * Globals.\n */\nexport const builtIns = new Set([\n  // Types.\n  'Array',\n  'Date',\n  'Error',\n  'JSON',\n  'Map',\n  'Math',\n  'Number',\n  'Object',\n  'Promise',\n  'RegExp',\n  'Set',\n  'String',\n\n  // Functions.\n  'isFinite',\n  'isNaN',\n  'parseFloat',\n  'parseInt',\n]);\n\n/**\n * Default system definitions.\n */\nexport const systemDefinitions = trim`\n  interface Array<T> { length: number; [n: number]: T; }\n  interface Boolean {}\n  interface Function {}\n  interface IArguments {}\n  interface Number {}\n  interface Object {}\n  interface RegExp {}\n  interface String { length: number; }\n\n  interface CallableFunction extends Function {}\n  interface NewableFunction extends Function {}\n\n  declare var console: { log(...args: any[]): void };\n`;\n", "//\n// Copyright 2025 DXOS.org\n//\n\nimport { createSystem, createVirtualTypeScriptEnvironment } from '@typescript/vfs';\nimport ts from 'typescript';\n\nimport { invariant } from '@dxos/invariant';\n\nimport { builtIns, systemDefinitions } from './eval';\n\n/**\n * Default system definitions.\n */\nconst systemFiles: VirtualFile[] = [\n  {\n    filename: '/lib.d.ts',\n    content: systemDefinitions,\n  },\n];\n\nexport type ParsedExpression = {\n  name?: string;\n  type?: 'function' | 'variable' | 'class' | 'interface';\n  value?: any;\n  valueType?: string;\n  parameters?: Array<{ name: string; type: string }>;\n  returnType?: string;\n  references?: string[];\n};\n\nexport type VirtualFile = {\n  filename: string;\n  content: string;\n};\n\n/**\n * TypeScript parser using Virtual File System for browser compatibility.\n * This provides full TypeScript analysis including type information.\n */\nexport class VirtualTypeScriptParser {\n  protected compilerOptions: ts.CompilerOptions = {\n    target: ts.ScriptTarget.ES2020,\n    module: ts.ModuleKind.ESNext,\n    moduleResolution: ts.ModuleResolutionKind.Bundler,\n    strict: true,\n    esModuleInterop: true,\n    skipLibCheck: true,\n    forceConsistentCasingInfilenames: true,\n    jsx: ts.JsxEmit.React,\n    noLib: true, // Don't automatically include default lib files.\n  };\n\n  /**\n   * Parse a single expression or statement.\n   */\n  parseExpression(input: string): ParsedExpression {\n    invariant(input.trim() !== '', 'input must not be empty');\n    const files: VirtualFile[] = [{ filename: '/temp.ts', content: input }];\n    const analysis = this.analyzeFiles(files);\n\n    // If no declarations found, check for standalone expression references.\n    if (analysis.length === 0) {\n      const sourcefilename = '/temp.ts';\n      const env = this.createEnvironment([{ filename: sourcefilename, content: input }]);\n      const sourceFile = env.getSourceFile(sourcefilename);\n      const typeChecker = env.languageService.getProgram()?.getTypeChecker();\n\n      if (sourceFile && typeChecker) {\n        // Check for assignment expressions.\n        const assignmentInfo = this.findAssignmentExpression(sourceFile, typeChecker);\n        if (assignmentInfo) {\n          return assignmentInfo;\n        }\n\n        const references = this.findAllReferences(sourceFile, typeChecker);\n        return { references };\n      }\n    }\n\n    return analysis[0];\n  }\n\n  /**\n   * Analyze multiple files with full type information.\n   */\n  analyzeFiles(files: VirtualFile[]): ParsedExpression[] {\n    const env = this.createEnvironment(files);\n    const results: ParsedExpression[] = [];\n    const typeChecker = env.languageService.getProgram()?.getTypeChecker();\n\n    // Analyze each file.\n    files.forEach((file) => {\n      const sourceFile = env.getSourceFile(file.filename);\n      if (!sourceFile || !typeChecker) {\n        return;\n      }\n\n      const fileResults = this.analyzeSourceFile(sourceFile, typeChecker);\n      results.push(...fileResults);\n    });\n\n    return results;\n  }\n\n  /**\n   * Analyze a source file with type information.\n   */\n  protected analyzeSourceFile(sourceFile: ts.SourceFile, typeChecker: ts.TypeChecker): ParsedExpression[] {\n    const results: ParsedExpression[] = [];\n\n    const visit = (node: ts.Node) => {\n      // Function declarations.\n      if (ts.isFunctionDeclaration(node) && node.name) {\n        const symbol = typeChecker.getSymbolAtLocation(node.name);\n        const type = symbol && typeChecker.getTypeOfSymbolAtLocation(symbol, node);\n        const signature = type && typeChecker.getSignaturesOfType(type, ts.SignatureKind.Call)[0];\n\n        results.push({\n          name: node.name.text,\n          type: 'function',\n          parameters: this.extractParameters(signature, typeChecker),\n          returnType: signature ? typeChecker.typeToString(signature.getReturnType()) : 'any',\n          references: this.findReferences(node, sourceFile, typeChecker),\n        });\n      }\n\n      // Variable declarations.\n      else if (ts.isVariableStatement(node)) {\n        node.declarationList.declarations.forEach((declaration) => {\n          if (ts.isIdentifier(declaration.name)) {\n            const symbol = typeChecker.getSymbolAtLocation(declaration.name);\n            const type = symbol && typeChecker.getTypeOfSymbolAtLocation(symbol, declaration);\n\n            let kind: 'function' | 'variable' = 'variable';\n            let parameters: Array<{ name: string; type: string }> | undefined;\n            let returnType: string | undefined;\n            let value: any;\n\n            // Get the type string.\n            const typeString = type ? typeChecker.typeToString(type) : 'any';\n\n            // Check if it's a function.\n            if (declaration.initializer) {\n              if (ts.isArrowFunction(declaration.initializer) || ts.isFunctionExpression(declaration.initializer)) {\n                kind = 'function';\n                const funcType = typeChecker.getTypeAtLocation(declaration.initializer);\n                const signature = typeChecker.getSignaturesOfType(funcType, ts.SignatureKind.Call)[0];\n                if (signature) {\n                  parameters = this.extractParameters(signature, typeChecker);\n                  returnType = typeChecker.typeToString(signature.getReturnType());\n                }\n              } else {\n                // Extract literal values\n                if (ts.isNumericLiteral(declaration.initializer)) {\n                  value = Number(declaration.initializer.text);\n                } else if (ts.isStringLiteral(declaration.initializer)) {\n                  value = declaration.initializer.text;\n                }\n              }\n            }\n\n            // Find references in the initializer only.\n            const refs = declaration.initializer\n              ? this.findReferences(declaration.initializer, sourceFile, typeChecker)\n              : [];\n\n            results.push({\n              name: declaration.name.text,\n              type: kind,\n              valueType: typeString,\n              value,\n              parameters,\n              returnType,\n              references: refs,\n            });\n          }\n        });\n      }\n\n      // Class declarations.\n      else if (ts.isClassDeclaration(node) && node.name) {\n        results.push({\n          name: node.name.text,\n          type: 'class',\n          references: this.findReferences(node, sourceFile, typeChecker),\n        });\n      }\n\n      // Interface declarations.\n      else if (ts.isInterfaceDeclaration(node)) {\n        results.push({\n          name: node.name.text,\n          type: 'interface',\n          references: this.findReferences(node, sourceFile, typeChecker),\n        });\n      }\n\n      ts.forEachChild(node, visit);\n    };\n\n    visit(sourceFile);\n    return results;\n  }\n\n  /**\n   * Extract parameter information from a signature.\n   */\n  private extractParameters(\n    signature: ts.Signature | undefined,\n    typeChecker: ts.TypeChecker,\n  ): Array<{ name: string; type: string }> {\n    if (!signature) {\n      return [];\n    }\n\n    return signature.parameters.map((param) => ({\n      name: param.getName(),\n      type: typeChecker.typeToString(typeChecker.getTypeOfSymbolAtLocation(param, param.valueDeclaration!)),\n    }));\n  }\n\n  /**\n   * Find all references to variables used in a node.\n   */\n  private findReferences(node: ts.Node, _sourceFile: ts.SourceFile, _typeChecker: ts.TypeChecker): string[] {\n    const references = new Set<string>();\n    const localSymbols = new Set<string>();\n\n    // First, collect local symbols (parameters, local variables).\n    const collectLocalSymbols = (node: ts.Node) => {\n      if (ts.isFunctionDeclaration(node) || ts.isArrowFunction(node) || ts.isFunctionExpression(node)) {\n        node.parameters.forEach((param) => {\n          if (ts.isIdentifier(param.name)) {\n            localSymbols.add(param.name.text);\n          }\n        });\n      }\n\n      if (ts.isVariableDeclaration(node) && ts.isIdentifier(node.name)) {\n        localSymbols.add(node.name.text);\n      }\n\n      ts.forEachChild(node, collectLocalSymbols);\n    };\n\n    collectLocalSymbols(node);\n\n    // Then find all identifier references.\n    const findRefs = (node: ts.Node) => {\n      if (ts.isIdentifier(node)) {\n        // Skip if it's a local symbol.\n        if (!localSymbols.has(node.text)) {\n          // Check if it's a reference (not a declaration).\n          const parent = node.parent;\n          const isDeclaration =\n            (ts.isVariableDeclaration(parent) && parent.name === node) ||\n            (ts.isFunctionDeclaration(parent) && parent.name === node) ||\n            (ts.isParameter(parent) && parent.name === node);\n\n          if (!isDeclaration && !this.isBuiltIn(node.text)) {\n            references.add(node.text);\n          }\n        }\n      }\n      ts.forEachChild(node, findRefs);\n    };\n\n    findRefs(node);\n    return Array.from(references);\n  }\n\n  /**\n   * Check if a name is a built-in global.\n   */\n  protected isBuiltIn(name: string): boolean {\n    return builtIns.has(name);\n  }\n\n  /**\n   * Find assignment expressions in a source file.\n   */\n  private findAssignmentExpression(sourceFile: ts.SourceFile, typeChecker: ts.TypeChecker): ParsedExpression | null {\n    let result: ParsedExpression | null = null;\n\n    const visit = (node: ts.Node) => {\n      if (ts.isExpressionStatement(node) && ts.isBinaryExpression(node.expression)) {\n        const expr = node.expression;\n        if (expr.operatorToken.kind === ts.SyntaxKind.EqualsToken && ts.isIdentifier(expr.left)) {\n          const type = 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