@dxos/assistant-toolkit 0.8.4-main.9be5663bfe → 0.8.4-main.abd8ff62ef

package/src/blueprints/research/functions/research.test.ts

@@ -1,150 +0,0 @@
-//
-// Copyright 2025 DXOS.org
-//
-
-import { describe, it } from '@effect/vitest';
-import * as Effect from 'effect/Effect';
-import { inspect } from 'node:util';
-
-import { MemoizedAiService } from '@dxos/ai/testing';
-import { AgentService } from '@dxos/assistant';
-import { AssistantTestLayer } from '@dxos/assistant/testing';
-import { Blueprint } from '@dxos/blueprints';
-import { Database, Feed, Filter, Obj, Query, Ref } from '@dxos/echo';
-import { TestHelpers } from '@dxos/effect/testing';
-import { FunctionInvocationService } from '@dxos/functions';
-import { invariant } from '@dxos/invariant';
-import { ObjectId } from '@dxos/keys';
-import { OperationHandlerSet } from '@dxos/operation';
-import { MarkdownBlueprint } from '@dxos/plugin-markdown/blueprints';
-import { Markdown } from '@dxos/plugin-markdown/types';
-import { HasSubject, Organization } from '@dxos/types';
-
-import { MarkdownHandlers } from '../../markdown';
-import ResearchBlueprint from '../blueprint';
-import { ResearchHandlers } from '../functions';
-import { ResearchDataTypes, ResearchGraph } from '../types';
-import { default as research } from './research';
-
-ObjectId.dangerouslyDisableRandomness();
-
-const TestLayer = AssistantTestLayer({
-  operationHandlers: OperationHandlerSet.merge(ResearchHandlers, MarkdownHandlers),
-  types: [
-    ...ResearchDataTypes,
-    ResearchGraph.ResearchGraph,
-    Blueprint.Blueprint,
-    Markdown.Document,
-    HasSubject.HasSubject,
-    Feed.Feed,
-  ],
-  blueprints: [ResearchBlueprint.make(), MarkdownBlueprint.make()],
-});
-
-const AgentTestLayer = AssistantTestLayer({
-  aiServicePreset: 'edge-remote',
-  operationHandlers: OperationHandlerSet.merge(ResearchHandlers, MarkdownHandlers),
-  types: [
-    ...ResearchDataTypes,
-    ResearchGraph.ResearchGraph,
-    Blueprint.Blueprint,
-    Markdown.Document,
-    HasSubject.HasSubject,
-    Feed.Feed,
-  ],
-  blueprints: [ResearchBlueprint.make(), MarkdownBlueprint.make()],
-});
-
-describe('Research', () => {
-  it.effect(
-    'call a function to generate a research report',
-    Effect.fnUntraced(
-      function* (_) {
-        yield* Database.add(
-          Obj.make(Organization.Organization, {
-            name: 'BlueYard',
-            website: 'https://blueyard.com',
-          }),
-        );
-        yield* Database.flush();
-        const result = yield* FunctionInvocationService.invokeFunction(research, {
-          query: 'Founders and portfolio of BlueYard.',
-        });
-
-        console.log(inspect(result, { depth: null, colors: true }));
-        console.log(JSON.stringify(result, null, 2));
-
-        yield* Database.flush();
-        const researchGraph = yield* ResearchGraph.query();
-        if (researchGraph) {
-          const data = yield* Database.load(researchGraph.queue).pipe(
-            Effect.flatMap((queue) => Effect.promise(() => queue.queryObjects())),
-          );
-          console.log(inspect(data, { depth: null, colors: true }));
-        }
-      },
-      Effect.provide(TestLayer),
-      TestHelpers.provideTestContext,
-    ),
-    MemoizedAiService.isGenerationEnabled() ? 240_000 : 30_000,
-  );
-
-  it.effect(
-    'create and update research report',
-    Effect.fnUntraced(
-      function* (_) {
-        const organization = yield* Database.add(
-          Obj.make(Organization.Organization, {
-            name: 'BlueYard',
-            website: 'https://blueyard.com',
-          }),
-        );
-
-        const agent = yield* AgentService.createSession({
-          blueprints: [ResearchBlueprint.make(), MarkdownBlueprint.make()],
-          context: [Ref.make(organization)],
-        });
-
-        yield* agent.submitPrompt(`Create a research summary about ${organization.name}.`);
-        yield* agent.waitForCompletion();
-        {
-          const docs = yield* Database.runQuery(
-            Query.select(Filter.id(organization.id)).targetOf(HasSubject.HasSubject).source(),
-          );
-          if (docs.length !== 1) {
-            throw new Error(`Expected 1 research document; got ${docs.length}: ${docs.map((_) => (_ as any).name)}`);
-          }
-
-          const doc = docs[0];
-          invariant(Obj.instanceOf(Markdown.Document, doc));
-          console.log({
-            name: doc.name,
-            content: yield* Database.load(doc.content).pipe(Effect.map((_) => _.content)),
-          });
-        }
-
-        yield* agent.submitPrompt('Add a section about their portfolio.');
-        yield* agent.waitForCompletion();
-        {
-          const docs = yield* Database.runQuery(
-            Query.select(Filter.id(organization.id)).targetOf(HasSubject.HasSubject).source(),
-          );
-          if (docs.length !== 1) {
-            throw new Error(`Expected 1 research document; got ${docs.length}: ${docs.map((_) => (_ as any).name)}`);
-          }
-
-          const doc = docs[0];
-          invariant(Obj.instanceOf(Markdown.Document, doc));
-          console.log({
-            name: doc.name,
-            content: yield* Database.load(doc.content).pipe(Effect.map((_) => _.content)),
-          });
-        }
-      },
-      Effect.provide(AgentTestLayer),
-      TestHelpers.provideTestContext,
-      TestHelpers.taggedTest('flaky'),
-    ),
-    MemoizedAiService.isGenerationEnabled() ? 240_000 : 30_000,
-  );
-});

package/src/blueprints/research/functions/research.ts

@@ -1,137 +0,0 @@
-//
-// Copyright 2025 DXOS.org
-//
-
-import * as AnthropicTool from '@effect/ai-anthropic/AnthropicTool';
-import * as Toolkit from '@effect/ai/Toolkit';
-import * as Array from 'effect/Array';
-import * as Effect from 'effect/Effect';
-import * as Function from 'effect/Function';
-import * as Layer from 'effect/Layer';
-import * as Option from 'effect/Option';
-import * as String from 'effect/String';
-
-import { AiService, ConsolePrinter } from '@dxos/ai';
-import { GenericToolkit } from '@dxos/ai';
-import { AiSession, GenerationObserver, ToolExecutionServices, createToolkit } from '@dxos/assistant';
-import { Template } from '@dxos/blueprints';
-import { type DXN, Entity, Obj } from '@dxos/echo';
-import { Database } from '@dxos/echo';
-import { FunctionInvocationService, Trace, TracingService } from '@dxos/functions';
-import { Operation } from '@dxos/operation';
-import { type Message, Person } from '@dxos/types';
-import { trim } from '@dxos/util';
-
-import { LocalSearchHandler, LocalSearchToolkit, makeGraphWriterHandler, makeGraphWriterToolkit } from '../../../crud';
-import { ResearchGraph } from '../types';
-import { ResearchDataTypes } from '../types';
-import { Research } from './definitions';
-import PROMPT from './research-instructions.tpl?raw';
-
-/**
- * Exec external service and return the results as a Subgraph.
- */
-export default Research.pipe(
-  Operation.withHandler(
-    Effect.fnUntraced(
-      function* ({ query, instructions, mockSearch = false, entityExtraction = false }) {
-        if (mockSearch) {
-          const mockPerson = yield* Database.add(
-            Obj.make(Person.Person, {
-              preferredName: 'John Doe',
-              emails: [{ value: 'john.doe@example.com' }],
-              phoneNumbers: [{ value: '123-456-7890' }],
-            }),
-          );
-
-          return {
-            document: trim`
-              The research ran in test-mode and was mocked. Proceed as usual.
-              We reference John Doe to test reference: ${Obj.getDXN(mockPerson)}
-            `,
-            objects: [Obj.toJSON(mockPerson)],
-          };
-        }
-
-        yield* Database.flush();
-        yield* TracingService.emitStatus({ message: 'Starting research...' });
-
-        const NativeWebSearch = Toolkit.make(AnthropicTool.WebSearch_20250305({}));
-
-        let toolkit: Toolkit.Any = NativeWebSearch;
-        let handlers: Layer.Layer<any, any> = Layer.empty as any;
-
-        const objectDXNs: DXN[] = [];
-        if (entityExtraction) {
-          const GraphWriterToolkit = makeGraphWriterToolkit({ schema: ResearchDataTypes });
-          const GraphWriterHandler = makeGraphWriterHandler(GraphWriterToolkit, {
-            onAppend: (dxns) => objectDXNs.push(...dxns),
-          });
-
-          toolkit = Toolkit.merge(toolkit, LocalSearchToolkit, GraphWriterToolkit);
-          handlers = Layer.mergeAll(handlers, LocalSearchHandler, GraphWriterHandler).pipe(
-            Layer.provide(ResearchGraph.contextQueueLayer),
-          ) as any;
-        }
-
-        const finishedToolkit = yield* createToolkit({ toolkit }).pipe(Effect.provide(handlers));
-
-        const session = new AiSession({
-          observer: GenerationObserver.fromPrinter(new ConsolePrinter({ tag: 'research' })),
-        });
-        const result = yield* session.run({
-          prompt: query,
-          system: join(
-            Template.process(PROMPT, { entityExtraction }),
-            instructions && `<instructions>${instructions}</instructions>`,
-          ),
-          toolkit: finishedToolkit,
-        });
-
-        const objects = yield* Effect.forEach(objectDXNs, (dxn) => Database.resolve(dxn)).pipe(
-          Effect.map(Array.map((obj) => Entity.toJSON(obj))),
-        );
-
-        return {
-          document: extractLastTextBlock(result),
-          objects,
-        };
-      },
-      Effect.provide(
-        Layer.mergeAll(
-          AiService.model('@anthropic/claude-sonnet-4-0'),
-          ToolExecutionServices,
-          FunctionInvocationService.layerNotAvailable,
-          Trace.writerLayerNoop,
-        ).pipe(Layer.provide(GenericToolkit.providerEmpty)),
-      ),
-    ),
-  ),
-);
-
-// TODO(burdon): Factor out.
-const join = (...strings: (string | undefined)[]) => strings.filter(Boolean).join('\n\n');
-
-/**
- * Extracts the last text block from the result.
- * Skips citations.
- */
-// TODO(burdon): Factor out.
-const extractLastTextBlock = (result: Message.Message[]) => {
-  return Function.pipe(
-    result,
-    Array.last,
-    Option.map(
-      Function.flow(
-        (_: Message.Message) => _.blocks,
-        Array.reverse,
-        Array.dropWhile((_: any) => _._tag === 'stats'),
-        Array.takeWhile((_: any) => _._tag === 'text'),
-        Array.reverse,
-        Array.map((_: any) => _.text),
-        Array.reduce('', String.concat),
-      ),
-    ),
-    Option.getOrElse(() => ''),
-  );
-};

package/src/blueprints/research/index.ts

@@ -1,7 +0,0 @@
-//
-// Copyright 2025 DXOS.org
-//
-
-export { default as ResearchBlueprint } from './blueprint';
-export { Research, DocumentCreate, ResearchHandlers } from './functions';
-export * from './types';

package/src/blueprints/research/types/ResearchGraph.ts

@@ -1,62 +0,0 @@
-//
-// Copyright 2025 DXOS.org
-//
-
-import * as Effect from 'effect/Effect';
-import * as Layer from 'effect/Layer';
-import * as Schema from 'effect/Schema';
-
-import { Database, Obj, Query, Ref, Type } from '@dxos/echo';
-import { Queue } from '@dxos/echo-db';
-import { SystemTypeAnnotation } from '@dxos/echo/internal';
-import { ContextQueueService, QueueService } from '@dxos/functions';
-
-/** @deprecated Use ResearchGraph instead. */
-export const LegacyResearchGraph = Schema.Struct({
-  queue: Ref.Ref(Queue),
-}).pipe(
-  Type.object({
-    typename: 'org.dxos.type.research-graph',
-    version: '0.1.0',
-  }),
-  SystemTypeAnnotation.set(true),
-);
-
-export interface LegacyResearchGraph extends Schema.Schema.Type<typeof LegacyResearchGraph> {}
-
-/**
- * Container for a set of ephemeral research results.
- */
-export const ResearchGraph = Schema.Struct({
-  queue: Ref.Ref(Queue),
-}).pipe(
-  Type.object({
-    typename: 'org.dxos.type.researchGraph',
-    version: '0.1.0',
-  }),
-  SystemTypeAnnotation.set(true),
-);
-
-export interface ResearchGraph extends Schema.Schema.Type<typeof ResearchGraph> {}
-
-export const create: () => Effect.Effect<ResearchGraph, never, Database.Service | QueueService> = Effect.fn(
-  'createResearchGraph',
-)(function* () {
-  const queue = yield* QueueService.createQueue();
-  return yield* Database.add(Obj.make(ResearchGraph, { queue: Ref.fromDXN(queue.dxn) }));
-});
-
-export const query: () => Effect.Effect<ResearchGraph | undefined, never, Database.Service> = Effect.fn(
-  'queryResearchGraph',
-)(function* () {
-  const objects = yield* Database.runQuery(Query.type(ResearchGraph));
-  return objects.at(0);
-});
-
-export const contextQueueLayer = Layer.unwrapEffect(
-  Effect.gen(function* () {
-    const researchGraph = (yield* query()) ?? (yield* create());
-    const researchQueue = yield* Database.load(researchGraph.queue);
-    return ContextQueueService.layer(researchQueue);
-  }),
-);

package/src/blueprints/research/types/index.ts

@@ -1,32 +0,0 @@
-//
-// Copyright 2026 DXOS.org
-//
-
-import { type Type } from '@dxos/echo';
-import { Text } from '@dxos/schema';
-import { Event, HasConnection, HasRelationship, LegacyOrganization, LegacyPerson, Pipeline, Task } from '@dxos/types';
-
-export * as ResearchGraph from './ResearchGraph';
-
-/**
- * Data types for research.
- */
-// TODO(burdon): This should not be hardcoded.
-export const ResearchDataTypes: Type.AnyEntity[] = [
-  // Objects
-  Event.Event,
-  Task.Task,
-  Text.Text,
-
-  // TODO(wittjosiah): Until views (e.g., Table) support relations this needs to be expressed via organization ref.
-  // Employer.Employer,
-  // Organization.Organization,
-  LegacyPerson,
-  LegacyOrganization,
-
-  Pipeline.Pipeline,
-
-  // Relations
-  HasRelationship.HasRelationship,
-  HasConnection.HasConnection,
-];

package/src/functions/entity-extraction/definitions.ts

@@ -1,44 +0,0 @@
-//
-// Copyright 2025 DXOS.org
-//
-
-import * as Schema from 'effect/Schema';
-
-import { AiService } from '@dxos/ai';
-import { Database, Obj } from '@dxos/echo';
-import { FunctionInvocationService, QueueService, TracingService } from '@dxos/functions';
-import { Trace } from '@dxos/functions';
-import { Operation } from '@dxos/operation';
-import { Message } from '@dxos/types';
-
-export const EntityExtraction = Operation.make({
-  meta: {
-    key: 'org.dxos.functions.entity-extraction',
-    name: 'Entity Extraction',
-    description: 'Extracts entities from emails and transcripts.',
-  },
-  input: Schema.Struct({
-    source: Message.Message.annotations({
-      description: 'Email or transcript to extract entities from.',
-    }),
-    // TODO(dmaretskyi): Consider making this an array of blueprints instead.
-    instructions: Schema.optional(Schema.String).annotations({
-      description: 'Instructions extraction process.',
-    }),
-  }),
-  output: Schema.Struct({
-    entities: Schema.optional(
-      Schema.Array(Obj.Unknown).annotations({
-        description: 'Extracted entities.',
-      }),
-    ),
-  }),
-  services: [
-    AiService.AiService,
-    Database.Service,
-    TracingService,
-    FunctionInvocationService,
-    QueueService,
-    Trace.TraceService,
-  ],
-});

package/src/functions/entity-extraction/entity-extraction.conversations.json

@@ -1 +0,0 @@
-{"conversations":[{"parameters":{"model":"@anthropic/claude-sonnet-4-0","stream":true,"tools":[{"name":"graph_writer","description":"Write to the local graph database","inputSchema":{"type":"object","required":[],"properties":{"objects_dxos_org_type_Organization":{"type":"array","items":{"type":"object","required":["id"],"properties":{"name":{"type":"string","title":"Name"},"description":{"type":"string","title":"Description"},"status":{"type":"string","enum":["prospect","qualified","active","commit","reject"],"title":"Status"},"image":{"type":"string","title":"Image"},"website":{"type":"string","title":"Website"},"id":{"type":"string","description":"The id of this object. Come up with a unique id based on your judgement."}},"additionalProperties":false},"description":"The objects of type: dxos.org/type/Organization. An organization."}},"additionalProperties":false}}]},"prompt":{"content":[{"role":"system","content":"Extract the sender's organization from the email. If you are not sure, do nothing.\nThe extracted organization URL must match the sender's email domain.\n,","options":{}},{"role":"user","content":"{\"source\":{\"id\":\"01JGFJJZ00G0WKQSJGMAKCNT87\",\"@type\":\"dxn:type:dxos.org/type/Message:0.2.0\",\"@meta\":{\"keys\":[],\"tags\":[\"important\"]},\"blocks\":[{\"_tag\":\"text\",\"text\":\"Hey team, what's up?\"},{\"_tag\":\"text\",\"text\":\"I'm working on a new algorithm today.\"},{\"_tag\":\"text\",\"text\":\"Anything new from the research team?\"}],\"created\":\"2025-01-01T00:00:00.000Z\",\"sender\":{\"email\":\"john.smith@anthropic.com\",\"name\":\"John Smith\"}},\"contact\":{\"id\":\"01JGFJJZ00G0WKQSJGMAKCNT89\",\"@type\":\"dxn:type:dxos.org/type/Person:0.1.0\",\"@meta\":{\"keys\":[],\"tags\":[\"important\"]},\"emails\":[{\"value\":\"john.smith@anthropic.com\"}],\"fullName\":\"John Smith\"}}","options":{"anthropic":{"cacheControl":{"ttl":"5m","type":"ephemeral"}}}}]},"response":[{"type":"response-metadata","id":"msg_01R1zT7R6NEdWg598pnsyNeA","modelId":"claude-sonnet-4-20250514","timestamp":"1970-01-01T00:00:00.000Z","metadata":{}},{"type":"text-start","id":"0","metadata":{}},{"type":"text-delta","id":"0","delta":"I can","metadata":{}},{"type":"text-delta","id":"0","delta":" see that","metadata":{}},{"type":"text-delta","id":"0","delta":" the","metadata":{}},{"type":"text-delta","id":"0","delta":" sender","metadata":{}},{"type":"text-delta","id":"0","delta":"'s","metadata":{}},{"type":"text-delta","id":"0","delta":" email","metadata":{}},{"type":"text-delta","id":"0","delta":" is from","metadata":{}},{"type":"text-delta","id":"0","delta":" the","metadata":{}},{"type":"text-delta","id":"0","delta":" domain","metadata":{}},{"type":"text-delta","id":"0","delta":" \"anthropic.com\".","metadata":{}},{"type":"text-delta","id":"0","delta":" 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s","metadata":{}},{"type":"tool-params-delta","id":"toolu_01BMGcZUghBKE9Zj3zs7b2NL","delta":"ystems\"}]}","metadata":{}},{"type":"tool-params-end","id":"toolu_01BMGcZUghBKE9Zj3zs7b2NL","metadata":{}},{"type":"tool-call","id":"toolu_01BMGcZUghBKE9Zj3zs7b2NL","name":"graph_writer","params":{"objects_dxos_org_type_Organization":[{"name":"Anthropic","description":"AI safety company focused on developing safe, beneficial AI systems","website":"https://anthropic.com","id":"anthropic"}]},"providerExecuted":false,"metadata":{}},{"type":"finish","reason":"tool-calls","usage":{"inputTokens":853,"outputTokens":154,"totalTokens":1007},"metadata":{"anthropic":{"usage":{"cache_creation":{"ephemeral_1h_input_tokens":0,"ephemeral_5m_input_tokens":0},"cache_creation_input_tokens":0,"cache_read_input_tokens":0,"input_tokens":853,"output_tokens":2,"server_tool_use":null,"service_tier":"standard"}}}}]},{"parameters":{"model":"@anthropic/claude-sonnet-4-0","stream":true,"tools":[{"name":"graph_writer","description":"Write to the local graph database","inputSchema":{"type":"object","required":[],"properties":{"objects_dxos_org_type_Organization":{"type":"array","items":{"type":"object","required":["id"],"properties":{"name":{"type":"string","title":"Name"},"description":{"type":"string","title":"Description"},"status":{"type":"string","enum":["prospect","qualified","active","commit","reject"],"title":"Status"},"image":{"type":"string","title":"Image"},"website":{"type":"string","title":"Website"},"id":{"type":"string","description":"The id of this object. Come up with a unique id based on your judgement."}},"additionalProperties":false},"description":"The objects of type: dxos.org/type/Organization. An organization."}},"additionalProperties":false}}]},"prompt":{"content":[{"role":"system","content":"Extract the sender's organization from the email. If you are not sure, do nothing.\nThe extracted organization URL must match the sender's email domain.\n,","options":{}},{"role":"user","content":"{\"source\":{\"id\":\"01JGFJJZ00G0WKQSJGMAKCNT87\",\"@type\":\"dxn:type:dxos.org/type/Message:0.2.0\",\"@meta\":{\"keys\":[],\"tags\":[\"important\"]},\"blocks\":[{\"_tag\":\"text\",\"text\":\"Hey team, what's up?\"},{\"_tag\":\"text\",\"text\":\"I'm working on a new algorithm today.\"},{\"_tag\":\"text\",\"text\":\"Anything new from the research team?\"}],\"created\":\"2025-01-01T00:00:00.000Z\",\"sender\":{\"email\":\"john.smith@anthropic.com\",\"name\":\"John Smith\"}},\"contact\":{\"id\":\"01JGFJJZ00G0WKQSJGMAKCNT89\",\"@type\":\"dxn:type:dxos.org/type/Person:0.1.0\",\"@meta\":{\"keys\":[],\"tags\":[\"important\"]},\"emails\":[{\"value\":\"john.smith@anthropic.com\"}],\"fullName\":\"John Smith\"}}","options":{}},{"role":"assistant","content":[{"type":"text","text":"I can see that the sender's email is from the domain \"anthropic.com\". I'll extract and create an organization record for Anthropic based on this email domain.","options":{}},{"type":"tool-call","id":"toolu_01BMGcZUghBKE9Zj3zs7b2NL","name":"graph_writer","params":{"objects_dxos_org_type_Organization":[{"id":"anthropic","name":"Anthropic","website":"https://anthropic.com","description":"AI safety company focused on developing safe, beneficial AI systems"}]},"providerExecuted":false,"options":{}}],"options":{}},{"role":"tool","content":[{"type":"tool-result","id":"toolu_01BMGcZUghBKE9Zj3zs7b2NL","name":"graph_writer","isFailure":false,"result":["dxn:queue:data:BDJXMULPW5FB55UZ7KP5HLDHVTXUTHE2U:01JGFJJZ00G0WKQSJGMAKCNT8B:01JGFJJZ00G0WKQSJGMAKCNT8G"],"providerExecuted":false,"options":{}}],"options":{"anthropic":{"cacheControl":{"ttl":"5m","type":"ephemeral"}}}}]},"response":[{"type":"response-metadata","id":"msg_01EfBN9rt7NxPo6mGTuhB8s2","modelId":"claude-sonnet-4-20250514","timestamp":"1970-01-01T00:00:00.000Z","metadata":{}},{"type":"text-start","id":"0","metadata":{}},{"type":"text-delta","id":"0","delta":"I","metadata":{}},{"type":"text-delta","id":"0","delta":"'ve successfully extracted and","metadata":{}},{"type":"text-delta","id":"0","delta":" created an","metadata":{}},{"type":"text-delta","id":"0","delta":" organization record for Anthropic based","metadata":{}},{"type":"text-delta","id":"0","delta":" on the sender's email domain (","metadata":{}},{"type":"text-delta","id":"0","delta":"anthropic.com). The organization has","metadata":{}},{"type":"text-delta","id":"0","delta":" been added","metadata":{}},{"type":"text-delta","id":"0","delta":" to the graph","metadata":{}},{"type":"text-delta","id":"0","delta":" database","metadata":{}},{"type":"text-delta","id":"0","delta":" with the name","metadata":{}},{"type":"text-delta","id":"0","delta":" \"Anthropic\" and their","metadata":{}},{"type":"text-delta","id":"0","delta":" corresponding","metadata":{}},{"type":"text-delta","id":"0","delta":" website.","metadata":{}},{"type":"text-end","id":"0","metadata":{}},{"type":"finish","reason":"stop","usage":{"inputTokens":6,"outputTokens":51,"totalTokens":57},"metadata":{"anthropic":{"usage":{"cache_creation":{"ephemeral_1h_input_tokens":0,"ephemeral_5m_input_tokens":0},"cache_creation_input_tokens":0,"cache_read_input_tokens":1083,"input_tokens":6,"output_tokens":1,"server_tool_use":null,"service_tier":"standard"}}}}]},{"parameters":{"model":"@anthropic/claude-sonnet-4-0","stream":true,"tools":[{"name":"graph_writer","description":"Write to the local graph database","inputSchema":{"type":"object","required":[],"properties":{"objects_dxos_org_type_Organization":{"type":"array","items":{"type":"object","required":["id"],"properties":{"name":{"type":"string","title":"Name"},"description":{"type":"string","title":"Description"},"status":{"type":"string","enum":["prospect","qualified","active","commit","reject"],"title":"Status"},"image":{"type":"string","title":"Image"},"website":{"type":"string","title":"Website"},"id":{"type":"string","description":"The id of this object. Come up with a unique id based on your judgement."}},"additionalProperties":false},"description":"The objects of type: dxos.org/type/Organization. An organization."}},"additionalProperties":false}}]},"prompt":{"content":[{"role":"system","content":"Extract the sender's organization from the email. If you are not sure, do nothing.\nThe extracted organization URL must match the sender's email domain.\n,","options":{}},{"role":"user","content":"{\"source\":{\"id\":\"01JGFJJZ00G0WKQSJGMAKCNT87\",\"@type\":\"dxn:type:dxos.org/type/Message:0.2.0\",\"@meta\":{\"keys\":[],\"tags\":[\"important\"]},\"blocks\":[{\"_tag\":\"text\",\"text\":\"Hey team, what's up?\"},{\"_tag\":\"text\",\"text\":\"I'm working on a new algorithm today.\"},{\"_tag\":\"text\",\"text\":\"Anything new from the research team?\"}],\"created\":\"2025-01-01T00:00:00.000Z\",\"sender\":{\"email\":\"john.smith@anthropic.com\",\"name\":\"John Smith\"}},\"contact\":{\"id\":\"01JGFJJZ00G0WKQSJGMAKCNT89\",\"@type\":\"dxn:type:dxos.org/type/Person:0.1.0\",\"@meta\":{\"keys\":[],\"tags\":[\"important\"]},\"emails\":[{\"value\":\"john.smith@anthropic.com\"}],\"fullName\":\"John Smith\"}}","options":{}},{"role":"assistant","content":[{"type":"text","text":"I can see that the sender's email is from the domain \"anthropic.com\". I'll extract and create an organization record for Anthropic based on this email domain.","options":{}},{"type":"tool-call","id":"toolu_01BMGcZUghBKE9Zj3zs7b2NL","name":"graph_writer","params":{"objects_dxos_org_type_Organization":[{"id":"anthropic","name":"Anthropic","website":"https://anthropic.com","description":"AI safety company focused on developing safe, beneficial AI systems"}]},"providerExecuted":false,"options":{}}],"options":{}},{"role":"tool","content":[{"type":"tool-result","id":"toolu_01BMGcZUghBKE9Zj3zs7b2NL","name":"graph_writer","isFailure":false,"result":["dxn:queue:data:BDJXMULPW5FB55UZ7KP5HLDHVTXUTHE2U:01JGFJJZ00G0WKQSJGMAKCNT8B:01JGFJJZ00G0WKQSJGMAKCNT8J"],"providerExecuted":false,"options":{}}],"options":{"anthropic":{"cacheControl":{"ttl":"5m","type":"ephemeral"}}}}]},"response":[{"type":"response-metadata","id":"msg_01YKxed8S5QVEThinBVELkac","modelId":"claude-sonnet-4-20250514","timestamp":"1970-01-01T00:00:00.000Z","metadata":{}},{"type":"text-start","id":"0","metadata":{}},{"type":"text-delta","id":"0","delta":"I've successfully extracted and","metadata":{}},{"type":"text-delta","id":"0","delta":" created an organization record for Anthropic","metadata":{}},{"type":"text-delta","id":"0","delta":" based","metadata":{}},{"type":"text-delta","id":"0","delta":" on the sender's email domain (","metadata":{}},{"type":"text-delta","id":"0","delta":"anthropic.com). The organization has","metadata":{}},{"type":"text-delta","id":"0","delta":" been added","metadata":{}},{"type":"text-delta","id":"0","delta":" to the database","metadata":{}},{"type":"text-delta","id":"0","delta":" with the name","metadata":{}},{"type":"text-delta","id":"0","delta":" \"Anthropic\" and the corresponding","metadata":{}},{"type":"text-delta","id":"0","delta":" website URL.","metadata":{}},{"type":"text-end","id":"0","metadata":{}},{"type":"finish","reason":"stop","usage":{"inputTokens":6,"outputTokens":51,"totalTokens":57},"metadata":{"anthropic":{"usage":{"cache_creation":{"ephemeral_1h_input_tokens":0,"ephemeral_5m_input_tokens":1083},"cache_creation_input_tokens":1083,"cache_read_input_tokens":0,"input_tokens":6,"output_tokens":5,"server_tool_use":null,"service_tier":"standard"}}}}]},{"parameters":{"model":"@anthropic/claude-sonnet-4-0","stream":true,"tools":[{"name":"graph_writer","description":"Write to the local graph database","inputSchema":{"type":"object","required":[],"properties":{"objects_org_dxos_type_organization":{"type":"array","items":{"type":"object","required":["id"],"properties":{"name":{"type":"string","title":"Name"},"description":{"type":"string","title":"Description"},"status":{"type":"string","enum":["prospect","qualified","active","commit","reject"],"title":"Status"},"image":{"type":"string","title":"Image"},"website":{"type":"string","title":"Website"},"id":{"type":"string","description":"The id of this object. Come up with a unique id based on your judgement."}},"additionalProperties":false},"description":"The objects of type: org.dxos.type.organization. An organization."}},"additionalProperties":false}}]},"prompt":{"content":[{"role":"system","content":"Extract the sender's organization from the email. If you are not sure, do nothing.\nThe extracted organization URL must match the sender's email domain.\n,","options":{}},{"role":"user","content":"{\"source\":{\"id\":\"01JGFJJZ00G0WKQSJGMAKCNT87\",\"@type\":\"dxn:type:org.dxos.type.message:0.1.0\",\"@meta\":{\"keys\":[],\"tags\":[\"important\"]},\"blocks\":[{\"_tag\":\"text\",\"text\":\"Hey team, what's up?\"},{\"_tag\":\"text\",\"text\":\"I'm working on a new algorithm today.\"},{\"_tag\":\"text\",\"text\":\"Anything new from the research team?\"}],\"created\":\"2025-01-01T00:00:00.000Z\",\"sender\":{\"email\":\"john.smith@anthropic.com\",\"name\":\"John Smith\"}},\"contact\":{\"id\":\"01JGFJJZ00G0WKQSJGMAKCNT89\",\"@type\":\"dxn:type:org.dxos.type.person:0.1.0\",\"@meta\":{\"keys\":[],\"tags\":[\"important\"]},\"emails\":[{\"value\":\"john.smith@anthropic.com\"}],\"fullName\":\"John Smith\"}}","options":{"anthropic":{"cacheControl":{"ttl":"5m","type":"ephemeral"}}}}]},"response":[{"type":"response-metadata","id":"msg_01Q3HMj5YmPrsW8Q1mrdZWUF","modelId":"claude-sonnet-4-20250514","timestamp":"1970-01-01T00:00:00.000Z","metadata":{}},{"type":"text-start","id":"0","metadata":{}},{"type":"text-delta","id":"0","delta":"I can","metadata":{}},{"type":"text-delta","id":"0","delta":" extract","metadata":{}},{"type":"text-delta","id":"0","delta":" the organization","metadata":{}},{"type":"text-delta","id":"0","delta":" from the","metadata":{}},{"type":"text-delta","id":"0","delta":" sender's email domain","metadata":{}},{"type":"text-delta","id":"0","delta":". The","metadata":{}},{"type":"text-delta","id":"0","delta":" sender","metadata":{}},{"type":"text-delta","id":"0","delta":" is John","metadata":{}},{"type":"text-delta","id":"0","delta":" Smith with","metadata":{}},{"type":"text-delta","id":"0","delta":" email","metadata":{}},{"type":"text-delta","id":"0","delta":" \"","metadata":{}},{"type":"text-delta","id":"0","delta":"john.smith@anthropic.com","metadata":{}},{"type":"text-delta","id":"0","delta":"\",","metadata":{}},{"type":"text-delta","id":"0","delta":" so the organization is","metadata":{}},{"type":"text-delta","id":"0","delta":" Anthropic.","metadata":{}},{"type":"text-end","id":"0","metadata":{}},{"type":"tool-params-start","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","name":"graph_writer","providerExecuted":false,"metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"{\"ob","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"jects_or","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"g_dxos_typ","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"e_orga","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"nization\"","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":": [{","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"\"id\":\"anth","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"ropic","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"\",\"name\"","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":":\"An","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"thropic\",\"w","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"ebs","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"ite","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"\":\"http","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"s:/","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"/ant","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"hrop","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"ic.com\"","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":",\"de","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"sc","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"ription\":\"AI","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":" sa","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"fety co","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"mpany focu","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"sed on d","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"eveloping ","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"safe,","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":" be","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"nef","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"icial AI ","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"sys","metadata":{}},{"type":"tool-params-delta","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","delta":"tems\"}]}","metadata":{}},{"type":"tool-params-end","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","metadata":{}},{"type":"finish","reason":"tool-calls","usage":{"inputTokens":853,"outputTokens":155,"totalTokens":1008},"metadata":{"anthropic":{"usage":{"cache_creation":{"ephemeral_1h_input_tokens":0,"ephemeral_5m_input_tokens":0},"cache_creation_input_tokens":0,"cache_read_input_tokens":0,"input_tokens":853,"output_tokens":2,"server_tool_use":null,"service_tier":"standard"}}}}]},{"parameters":{"model":"@anthropic/claude-sonnet-4-0","stream":true,"tools":[{"name":"graph_writer","description":"Write to the local graph database","inputSchema":{"type":"object","required":[],"properties":{"objects_org_dxos_type_organization":{"type":"array","items":{"type":"object","required":["id"],"properties":{"name":{"type":"string","title":"Name"},"description":{"type":"string","title":"Description"},"status":{"type":"string","enum":["prospect","qualified","active","commit","reject"],"title":"Status"},"image":{"type":"string","title":"Image"},"website":{"type":"string","title":"Website"},"id":{"type":"string","description":"The id of this object. Come up with a unique id based on your judgement."}},"additionalProperties":false},"description":"The objects of type: org.dxos.type.organization. An organization."}},"additionalProperties":false}}]},"prompt":{"content":[{"role":"system","content":"Extract the sender's organization from the email. If you are not sure, do nothing.\nThe extracted organization URL must match the sender's email domain.\n,","options":{}},{"role":"user","content":"{\"source\":{\"id\":\"01JGFJJZ00G0WKQSJGMAKCNT87\",\"@type\":\"dxn:type:org.dxos.type.message:0.1.0\",\"@meta\":{\"keys\":[],\"tags\":[\"important\"]},\"blocks\":[{\"_tag\":\"text\",\"text\":\"Hey team, what's up?\"},{\"_tag\":\"text\",\"text\":\"I'm working on a new algorithm today.\"},{\"_tag\":\"text\",\"text\":\"Anything new from the research team?\"}],\"created\":\"2025-01-01T00:00:00.000Z\",\"sender\":{\"email\":\"john.smith@anthropic.com\",\"name\":\"John Smith\"}},\"contact\":{\"id\":\"01JGFJJZ00G0WKQSJGMAKCNT89\",\"@type\":\"dxn:type:org.dxos.type.person:0.1.0\",\"@meta\":{\"keys\":[],\"tags\":[\"important\"]},\"emails\":[{\"value\":\"john.smith@anthropic.com\"}],\"fullName\":\"John Smith\"}}","options":{}},{"role":"assistant","content":[{"type":"text","text":"I can extract the organization from the sender's email domain. The sender is John Smith with email \"john.smith@anthropic.com\", so the organization is Anthropic.","options":{}},{"type":"tool-call","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","name":"graph_writer","params":{"objects_org_dxos_type_organization":[{"id":"anthropic","name":"Anthropic","website":"https://anthropic.com","description":"AI safety company focused on developing safe, beneficial AI systems"}]},"providerExecuted":false,"options":{}}],"options":{}},{"role":"tool","content":[{"type":"tool-result","id":"toolu_01LuZVjxCSoYJHFrRJyGxBMm","name":"graph_writer","isFailure":false,"result":["dxn:queue:data:BDJXMULPW5FB55UZ7KP5HLDHVTXUTHE2U:01JGFJJZ00G0WKQSJGMAKCNT8B:01JGFJJZ00G0WKQSJGMAKCNT8J"],"providerExecuted":false,"options":{}}],"options":{"anthropic":{"cacheControl":{"ttl":"5m","type":"ephemeral"}}}}]},"response":[{"type":"response-metadata","id":"msg_01493TEmzKKfbvTSmBq7LDuU","modelId":"claude-sonnet-4-20250514","timestamp":"1970-01-01T00:00:00.000Z","metadata":{}},{"type":"text-start","id":"0","metadata":{}},{"type":"text-delta","id":"0","delta":"I","metadata":{}},{"type":"text-delta","id":"0","delta":"'ve successfully extracted and","metadata":{}},{"type":"text-delta","id":"0","delta":" added","metadata":{}},{"type":"text-delta","id":"0","delta":" the organization \"","metadata":{}},{"type":"text-delta","id":"0","delta":"Anthropic\" to the graph","metadata":{}},{"type":"text-delta","id":"0","delta":" database based","metadata":{}},{"type":"text-delta","id":"0","delta":" on the sender's email domain (","metadata":{}},{"type":"text-delta","id":"0","delta":"anthropic.com). The organization entry","metadata":{}},{"type":"text-delta","id":"0","delta":" includes the","metadata":{}},{"type":"text-delta","id":"0","delta":" name","metadata":{}},{"type":"text-delta","id":"0","delta":", website URL","metadata":{}},{"type":"text-delta","id":"0","delta":" that","metadata":{}},{"type":"text-delta","id":"0","delta":" matches","metadata":{}},{"type":"text-delta","id":"0","delta":" the email","metadata":{}},{"type":"text-delta","id":"0","delta":" domain, and a","metadata":{}},{"type":"text-delta","id":"0","delta":" description of","metadata":{}},{"type":"text-delta","id":"0","delta":" what Anthropic does","metadata":{}},{"type":"text-delta","id":"0","delta":".","metadata":{}},{"type":"text-end","id":"0","metadata":{}},{"type":"finish","reason":"stop","usage":{"inputTokens":6,"outputTokens":58,"totalTokens":64},"metadata":{"anthropic":{"usage":{"cache_creation":{"ephemeral_1h_input_tokens":0,"ephemeral_5m_input_tokens":1084},"cache_creation_input_tokens":1084,"cache_read_input_tokens":0,"input_tokens":6,"output_tokens":1,"server_tool_use":null,"service_tier":"standard"}}}}]}]}

package/src/functions/entity-extraction/entity-extraction.test.ts

@@ -1,74 +0,0 @@
-//
-// Copyright 2025 DXOS.org
-//
-
-import { describe, expect, it } from '@effect/vitest';
-import * as Effect from 'effect/Effect';
-
-import { MemoizedAiService } from '@dxos/ai/testing';
-import { AssistantTestLayer } from '@dxos/assistant/testing';
-import { Blueprint } from '@dxos/blueprints';
-import { Obj } from '@dxos/echo';
-import { Database } from '@dxos/echo';
-import { TestHelpers } from '@dxos/effect/testing';
-import { FunctionInvocationService } from '@dxos/functions';
-import { ObjectId } from '@dxos/keys';
-import { OperationHandlerSet } from '@dxos/operation';
-import { Message, Organization, Person } from '@dxos/types';
-
-import { ResearchGraph } from '../../blueprints';
-import { default as entityExtraction } from './entity-extraction';
-
-ObjectId.dangerouslyDisableRandomness();
-
-const TestLayer = AssistantTestLayer({
-  operationHandlers: OperationHandlerSet.make(entityExtraction),
-  types: [Blueprint.Blueprint, Message.Message, Person.Person, Organization.Organization, ResearchGraph.ResearchGraph],
-});
-
-describe('Entity extraction', () => {
-  it.effect(
-    'calls a function to generate a research report',
-    Effect.fnUntraced(
-      function* (_) {
-        const email = yield* Database.add(
-          Obj.make(Message.Message, {
-            [Obj.Meta]: {
-              tags: ['important'],
-            },
-            created: new Date('2025-01-01').toISOString(),
-            sender: {
-              name: 'John Smith',
-              email: 'john.smith@anthropic.com',
-            },
-            blocks: [
-              {
-                _tag: 'text',
-                text: "Hey team, what's up?",
-              },
-              {
-                _tag: 'text',
-                text: "I'm working on a new algorithm today.",
-              },
-              {
-                _tag: 'text',
-                text: 'Anything new from the research team?',
-              },
-            ],
-          }),
-        );
-        yield* Database.flush();
-        const result = yield* FunctionInvocationService.invokeFunction(entityExtraction, {
-          source: email,
-        });
-        expect(result.entities).toHaveLength(2);
-        for (const entity of result.entities ?? []) {
-          expect(Obj.getMeta(entity)?.tags).toContain('important');
-        }
-      },
-      Effect.provide(TestLayer),
-      TestHelpers.provideTestContext,
-    ),
-    MemoizedAiService.isGenerationEnabled() ? 60_000 : undefined,
-  );
-});