@duetso/agent 0.1.149 → 0.1.150

package/dist/package.json

@@ -1,6 +1,6 @@
 {
     "name": "@duetso/agent",
-    "version": "0.1.149",
+    "version": "0.1.150",
     "description": "An opinionated full-stack agent turn runner with native memories, interrupts, and multi-agent orchestration",
     "keywords": [
         "agent",

package/dist/src/memory/pglite.d.ts

@@ -107,6 +107,19 @@ export declare function openForRecovery(path: string): Promise<PGlite>;
  * memory.db aside because of a transient packaging error.
  */
 export declare function isExternalAssetError(error: unknown, dataDir: string): boolean;
+/**
+ * True when `path` looks like a valid PGlite cluster: it contains a
+ * non-empty `PG_VERSION` and every directory PGlite needs to bootstrap a
+ * cluster. Used as a quarantine guard so an upgrade-time WASM/data load
+ * failure cannot move a healthy memory.db aside. Exported for testing.
+ */
+export declare function looksLikeIntactPGliteDirectory(path: string): boolean;
+/**
+ * List rotating backup directories that sit alongside the live dataDir.
+ * Returns absolute paths sorted newest-first by lexicographic timestamp.
+ * Exported for testing.
+ */
+export declare function listBackups(path: string): string[];
 /**
  * Renames a presumed-corrupt data directory aside so a fresh database can be
  * created in its place. Returns the new path. Exported for testing.

package/dist/src/memory/pglite.d.ts.map

@@ -1 +1 @@
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package/dist/src/memory/pglite.js

@@ -1,7 +1,7 @@
 import { PGlite } from "@electric-sql/pglite";
 import { vector } from "@electric-sql/pglite/vector";
-import { closeSync, mkdirSync, openSync, readFileSync, renameSync, statSync, unlinkSync, writeSync, } from "node:fs";
-import { dirname, resolve as resolvePath, join } from "node:path";
+import { closeSync, cpSync, mkdirSync, openSync, readdirSync, readFileSync, renameSync, rmSync, statSync, unlinkSync, writeSync, } from "node:fs";
+import { basename, dirname, resolve as resolvePath, join } from "node:path";
 /**
  * pgvector ships with PGlite as an opt-in WASM extension. We load it
  * unconditionally so every memory database can run hybrid retrieval
@@ -43,6 +43,41 @@ export class MemoryLockTimeoutError extends Error {
  * indefinitely.
  */
 export const DEFAULT_OPEN_LOCK_WAIT_BUDGET_MS = 30_000;
+/**
+ * Total wall-time we'll spend retrying opens on a structurally-intact cluster before
+ * giving up and quarantining. Long enough to outlast a slow `npm install -g` rewrite
+ * of `node_modules` (the only known transient failure mode that mimics corruption,
+ * routinely 5-12s on cold caches), short enough to stay well under a typical agent
+ * turn so a genuinely WAL-corrupted dataDir surfaces as a quarantine event in the
+ * same session instead of disappearing into a longer-than-the-turn poll.
+ */
+const RETRY_BEFORE_QUARANTINE_BUDGET_MS = 10_000;
+/**
+ * Number of rotating on-disk backups we keep alongside the live dataDir. Each new
+ * startup snapshots the dir (best-effort) so we always have a recent known-good
+ * cluster to fall back on if PGlite can no longer open the current one. Five is
+ * enough to span a few days of normal use without bloating `~/.duet`.
+ */
+const MAX_BACKUPS = 5;
+/**
+ * Filename prefix used for rotating on-disk backups. Siblings to the live `memory.db`
+ * directory, suffixed with an ISO timestamp so newest-first sort is plain lexicographic.
+ */
+const BACKUP_SUFFIX_PREFIX = ".backup-";
+/**
+ * Skip taking a startup snapshot if the most recent backup is younger than this.
+ * MemorySession refcount-opens many times per turn; without dedupe we'd burn inodes
+ * snapshotting on every acquire. Picked to be much shorter than typical inter-session
+ * gaps so a fresh duet launch after even a brief pause still gets a new backup.
+ */
+const BACKUP_DEDUPE_WINDOW_MS = 5 * 60 * 1_000;
+/**
+ * Backoff schedule between retry attempts during the quarantine grace window.
+ * Front-loaded (250ms, 500ms, 1s) so a fast upgrade is picked up quickly,
+ * with a 2s ceiling so a long `npm install` does not produce a retry storm
+ * before the budget elapses.
+ */
+const RETRY_BACKOFF_MS = [250, 500, 1_000, 2_000];
 /**
  * Exponential backoff schedule used by `pollAcquireOpenLock`. Doubles from 50ms up to a 1s
  * ceiling so a peer that releases the lock during an idle-close gap is picked up within ~50ms,
@@ -171,6 +206,13 @@ export async function openPGliteHoldingLock(path, options, lockPath) {
     clearStalePostmasterLock(path);
     try {
         const db = await openAndProbe(path, options.init);
+        // Snapshot the cluster after a successful open + init so every entry in
+        // the backup pool is verified-readable. Snapshotting before open would
+        // happily copy a WAL-corrupted dataDir into the pool and rotate out the
+        // last good copy, defeating the rotation. CHECKPOINT first so the on-disk
+        // bytes match the in-memory state PGlite just validated. Best-effort:
+        // checkpoint and copy failures are warned about but never block startup.
+        await snapshotAfterSuccessfulOpen(db, path);
         return { db, lockPath };
     }
     catch (error) {
@@ -184,17 +226,55 @@ export async function openPGliteHoldingLock(path, options, lockPath) {
         // node_modules fully unpacked) succeeds against the existing data.
         if (isExternalAssetError(error, path))
             throw error;
+        // Retry-then-quarantine for the structurally-intact case. A `duet
+        // upgrade` running concurrently with another duet CLI rewrites
+        // node_modules mid-flight, and the still-running duet's reopen can
+        // surface failure shapes that are not strictly ENOENT (a half-written
+        // wasm/data file appears as a `WebAssembly.CompileError`, a
+        // `RangeError`, or an ENOENT without a parseable path). These all
+        // resolve on their own once npm finishes, so polling for a tolerant
+        // window distinguishes them from genuine data corruption (WAL torn by
+        // a kill mid-write), which fails deterministically on every attempt.
+        // We only run the retry loop when the on-disk cluster *looks* intact
+        // (PG_VERSION + required subdirs present) so a clearly broken layout
+        // still quarantines immediately on the first failure.
+        if (looksLikeIntactPGliteDirectory(path)) {
+            const opened = await retryOpenWhileIntact(path, options.init);
+            if (opened)
+                return { db: opened, lockPath };
+            // Every attempt within the grace window failed — treat as genuine
+            // corruption and fall through to recovery using the original
+            // error as the cause.
+        }
         // Release the lock before renaming the directory aside — the lock
         // file lives inside that directory and would be moved with it.
         releaseOpenLock(lockPath);
-        const backupPath = quarantineDataDirectory(path);
+        // Before quarantining + starting fresh, try restoring from rotating backups.
+        // Walk newest-first; each candidate is verified by actually opening it.
+        // On success the unreadable live dir is quarantined and the restored
+        // backup takes its place, so the user keeps their memory instead of
+        // starting from an empty db.
+        const restored = await tryRestoreFromBackup(path, options.init);
+        if (restored) {
+            if (options.onRecover) {
+                options.onRecover({ backupPath: restored.quarantinedPath, cause: error });
+            }
+            else {
+                const reason = error instanceof Error ? error.message || error.name : String(error);
+                console.warn(`[duet] memory database at ${path} could not be opened (${reason}). ` +
+                    `Restored from backup ${restored.backupSource}; ` +
+                    `the unreadable copy was moved to ${restored.quarantinedPath}.`);
+            }
+            return { db: restored.db, lockPath: restored.lockPath };
+        }
+        const quarantinedPath = quarantineDataDirectory(path);
         if (options.onRecover) {
-            options.onRecover({ backupPath, cause: error });
+            options.onRecover({ backupPath: quarantinedPath, cause: error });
         }
         else {
             const reason = error instanceof Error ? error.message || error.name : String(error);
             console.warn(`[duet] memory database at ${path} could not be opened (${reason}). ` +
-                `Moved aside to ${backupPath} and starting fresh.`);
+                `Moved aside to ${quarantinedPath} and starting fresh.`);
         }
         const fresh = acquireOpenLock(path);
         const db = await openAndProbe(path, options.init);
@@ -224,6 +304,36 @@ function installLockReleasingClose(db, lockPath) {
     };
     return db;
 }
+/**
+ * Poll `openAndProbe` for up to `RETRY_BEFORE_QUARANTINE_BUDGET_MS` while the on-disk
+ * cluster keeps looking intact. Returns the opened db on success, or `undefined` when
+ * the budget elapses (the caller then quarantines). External-asset ENOENTs short-circuit
+ * the loop — they signal a node_modules-side problem the retry cannot fix, and surfacing
+ * them as-is lets the user act on the real failure instead of waiting out the full budget
+ * to no effect. If the directory layout becomes structurally broken during the loop (e.g.
+ * a peer process truncated it), we also bail so quarantine can run.
+ */
+async function retryOpenWhileIntact(path, init) {
+    const start = Date.now();
+    for (let attempt = 0;; attempt++) {
+        const elapsed = Date.now() - start;
+        if (elapsed >= RETRY_BEFORE_QUARANTINE_BUDGET_MS)
+            return undefined;
+        const backoff = RETRY_BACKOFF_MS[Math.min(attempt, RETRY_BACKOFF_MS.length - 1)] ?? 2_000;
+        const remaining = RETRY_BEFORE_QUARANTINE_BUDGET_MS - elapsed;
+        await sleep(Math.max(1, Math.min(backoff, remaining)));
+        try {
+            return await openAndProbe(path, init);
+        }
+        catch (retryError) {
+            if (isExternalAssetError(retryError, path))
+                throw retryError;
+            if (!looksLikeIntactPGliteDirectory(path))
+                return undefined;
+            // Otherwise loop and try again until the budget elapses.
+        }
+    }
+}
 async function openAndProbe(path, init) {
     // PGlite.create is the only API path that lets us register loadable
     // extensions at construction time — the bare `new PGlite(path)` form
@@ -292,6 +402,173 @@ export function isExternalAssetError(error, dataDir) {
         return normalized !== normalizedDir && !normalized.startsWith(`${normalizedDir}/`);
     });
 }
+/**
+ * Subdirectories every PGlite cluster on disk has. If all of these plus a
+ * parseable `PG_VERSION` are present, the dataDir's on-disk layout is
+ * intact and any open failure is environmental (mid-upgrade asset rewrite,
+ * permissions, WASM load) rather than data corruption.
+ */
+const REQUIRED_PGLITE_SUBDIRS = ["base", "global", "pg_wal"];
+/**
+ * True when `path` looks like a valid PGlite cluster: it contains a
+ * non-empty `PG_VERSION` and every directory PGlite needs to bootstrap a
+ * cluster. Used as a quarantine guard so an upgrade-time WASM/data load
+ * failure cannot move a healthy memory.db aside. Exported for testing.
+ */
+export function looksLikeIntactPGliteDirectory(path) {
+    if (!isExistingDirectory(path))
+        return false;
+    const versionFile = join(path, "PG_VERSION");
+    const version = tryReadFile(versionFile);
+    if (!version || version.trim().length === 0)
+        return false;
+    return REQUIRED_PGLITE_SUBDIRS.every((sub) => isExistingDirectory(join(path, sub)));
+}
+/**
+ * List rotating backup directories that sit alongside the live dataDir.
+ * Returns absolute paths sorted newest-first by lexicographic timestamp.
+ * Exported for testing.
+ */
+export function listBackups(path) {
+    const dir = dirname(path);
+    const base = basename(path);
+    let entries;
+    try {
+        entries = readdirSync(dir);
+    }
+    catch (error) {
+        if (error.code === "ENOENT")
+            return [];
+        throw error;
+    }
+    const prefix = `${base}${BACKUP_SUFFIX_PREFIX}`;
+    return entries
+        .filter((name) => name.startsWith(prefix))
+        .map((name) => join(dir, name))
+        .sort()
+        .reverse();
+}
+/**
+ * Take a best-effort snapshot of `path` for later restoration. Called only
+ * after a successful open + init so each entry in the rotation is
+ * verified-readable. CHECKPOINT first to flush dirty buffers so the on-disk
+ * bytes match the in-memory state PGlite just validated. No-ops when a recent
+ * backup already exists within the dedupe window (MemorySession refcount-opens
+ * would otherwise burn inodes on every acquire). Prunes to `MAX_BACKUPS`
+ * newest. Errors at any step are warned about but never block startup.
+ */
+async function snapshotAfterSuccessfulOpen(db, path) {
+    try {
+        const existing = listBackups(path);
+        if (existing.length > 0) {
+            const newest = existing[0];
+            if (newest) {
+                try {
+                    const age = Date.now() - statSync(newest).mtimeMs;
+                    if (age < BACKUP_DEDUPE_WINDOW_MS)
+                        return;
+                }
+                catch {
+                    // If we can't stat the newest backup, fall through and take a new one.
+                }
+            }
+        }
+        try {
+            await db.exec("CHECKPOINT");
+        }
+        catch {
+            // Checkpoint failures should not block the snapshot — the WAL on disk
+            // is still self-consistent, the copy just may be slightly stale.
+        }
+        const stamp = new Date().toISOString().replace(/[:.]/g, "-");
+        const backup = `${path}${BACKUP_SUFFIX_PREFIX}${stamp}`;
+        // `cp -r` semantics; on APFS this uses clonefile so 60MB is near-instant.
+        cpSync(path, backup, { recursive: true });
+        pruneOldBackups(path);
+    }
+    catch (error) {
+        const reason = error instanceof Error ? error.message || error.name : String(error);
+        console.warn(`[duet] could not snapshot memory db at ${path} for backup (${reason}).`);
+    }
+}
+function pruneOldBackups(path) {
+    const backups = listBackups(path);
+    for (const stale of backups.slice(MAX_BACKUPS)) {
+        try {
+            rmSync(stale, { recursive: true, force: true });
+        }
+        catch {
+            // Best-effort prune; the next startup will try again.
+        }
+    }
+}
+/**
+ * Try restoring `path` from the rotating backups, newest-first. For each
+ * candidate: move the unreadable live dir aside, move the backup into place,
+ * acquire a fresh open-lock, and verify by actually opening + probing the
+ * restored dir. Returns the opened db + the path the unreadable live dir was
+ * quarantined to on success. On failure rolls the swap back and tries the next
+ * backup. Returns undefined when no backup yields a readable db.
+ */
+async function tryRestoreFromBackup(path, init) {
+    const backups = listBackups(path);
+    for (const candidate of backups) {
+        let quarantinedPath;
+        try {
+            quarantinedPath = quarantineDataDirectory(path);
+        }
+        catch {
+            // If we can't quarantine the live dir, no point continuing with this
+            // candidate or any other; surface to the caller's quarantine path.
+            return undefined;
+        }
+        try {
+            renameSync(candidate, path);
+        }
+        catch {
+            // Swap back the live dir; try the next candidate.
+            try {
+                renameSync(quarantinedPath, path);
+            }
+            catch {
+                // Live dir is now lost; let the caller's fresh-start path handle it.
+            }
+            continue;
+        }
+        try {
+            clearStalePostmasterLock(path);
+            const lockPath = acquireOpenLock(path);
+            try {
+                const db = await openAndProbe(path, init);
+                return { db, lockPath, backupSource: candidate, quarantinedPath };
+            }
+            catch (verifyError) {
+                releaseOpenLock(lockPath);
+                throw verifyError;
+            }
+        }
+        catch {
+            // This backup did not open either. Swap the original unreadable dir
+            // back into place so the next candidate (or the caller's fresh-start
+            // fallback) sees the same state we started with.
+            try {
+                renameSync(path, `${candidate}.failed-${Date.now()}`);
+            }
+            catch {
+                // If we can't move the failed candidate aside, leave it; the next
+                // iteration's rename(path, quarantinedPath) will still succeed.
+            }
+            try {
+                renameSync(quarantinedPath, path);
+            }
+            catch {
+                // Couldn't restore original state; bail and let caller quarantine.
+                return undefined;
+            }
+        }
+    }
+    return undefined;
+}
 /**
  * Renames a presumed-corrupt data directory aside so a fresh database can be
  * created in its place. Returns the new path. Exported for testing.

package/dist/src/memory/pglite.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@duetso/agent",
-  "version": "0.1.149",
+  "version": "0.1.150",
   "description": "An opinionated full-stack agent turn runner with native memories, interrupts, and multi-agent orchestration",
   "keywords": [
     "agent",