@dreb/coding-agent 1.18.0 → 2.0.0

package/dist/core/search/db.js

@@ -1,406 +0,0 @@
-/**
- * SQLite database abstraction for the search index.
- *
- * Uses `node:sqlite` (built-in Node 22+). Feature-gated — callers must check
- * availability via `isSqliteAvailable()` before constructing a SearchDatabase.
- */
-import { createRequire } from "node:module";
-import { unpackVector } from "./vector-store.js";
-// ============================================================================
-// Availability Check
-// ============================================================================
-const require = createRequire(import.meta.url);
-let _sqliteAvailable = null;
-/** Check whether `node:sqlite` is available in this Node.js runtime. */
-export function isSqliteAvailable() {
-    if (_sqliteAvailable !== null)
-        return _sqliteAvailable;
-    try {
-        require("node:sqlite");
-        _sqliteAvailable = true;
-    }
-    catch {
-        _sqliteAvailable = false;
-    }
-    return _sqliteAvailable;
-}
-// ============================================================================
-// Schema Version
-// ============================================================================
-const SCHEMA_VERSION = 1;
-// ============================================================================
-// Database
-// ============================================================================
-/** Wrapper around `node:sqlite` DatabaseSync for the search index. */
-export class SearchDatabase {
-    db; // DatabaseSync from node:sqlite
-    constructor(dbPath) {
-        // Import synchronously — caller must have verified availability
-        const { DatabaseSync } = require("node:sqlite");
-        this.db = new DatabaseSync(dbPath);
-        this.db.exec("PRAGMA journal_mode=WAL");
-        this.db.exec("PRAGMA synchronous=NORMAL");
-        this.db.exec("PRAGMA foreign_keys=ON");
-        this.initSchema();
-    }
-    /** Create or migrate the database schema. */
-    initSchema() {
-        // Check schema version
-        this.db.exec("CREATE TABLE IF NOT EXISTS meta (key TEXT PRIMARY KEY, value TEXT)");
-        const versionRow = this.db.prepare("SELECT value FROM meta WHERE key = 'schema_version'").get();
-        const currentVersion = versionRow ? Number.parseInt(versionRow.value, 10) : 0;
-        if (currentVersion >= SCHEMA_VERSION)
-            return;
-        // Files table
-        this.db.exec(`
-			CREATE TABLE IF NOT EXISTS files (
-				id INTEGER PRIMARY KEY AUTOINCREMENT,
-				file_path TEXT NOT NULL UNIQUE,
-				mtime REAL NOT NULL,
-				file_type TEXT NOT NULL
-			)
-		`);
-        // Chunks table
-        this.db.exec(`
-			CREATE TABLE IF NOT EXISTS chunks (
-				id INTEGER PRIMARY KEY AUTOINCREMENT,
-				file_id INTEGER NOT NULL REFERENCES files(id) ON DELETE CASCADE,
-				file_path TEXT NOT NULL,
-				start_line INTEGER NOT NULL,
-				end_line INTEGER NOT NULL,
-				kind TEXT NOT NULL,
-				name TEXT,
-				content TEXT NOT NULL,
-				file_type TEXT NOT NULL
-			)
-		`);
-        this.db.exec("CREATE INDEX IF NOT EXISTS idx_chunks_file_id ON chunks(file_id)");
-        this.db.exec("CREATE INDEX IF NOT EXISTS idx_chunks_file_path ON chunks(file_path)");
-        // FTS5 virtual table (content-synced with chunks)
-        this.db.exec(`
-			CREATE VIRTUAL TABLE IF NOT EXISTS chunks_fts USING fts5(
-				content,
-				name,
-				file_path,
-				content='chunks',
-				content_rowid='id',
-				tokenize='porter unicode61'
-			)
-		`);
-        // FTS triggers for incremental updates
-        this.db.exec(`
-			CREATE TRIGGER IF NOT EXISTS chunks_ai AFTER INSERT ON chunks BEGIN
-				INSERT INTO chunks_fts(rowid, content, name, file_path)
-				VALUES (new.id, new.content, new.name, new.file_path);
-			END
-		`);
-        this.db.exec(`
-			CREATE TRIGGER IF NOT EXISTS chunks_ad AFTER DELETE ON chunks BEGIN
-				INSERT INTO chunks_fts(chunks_fts, rowid, content, name, file_path)
-				VALUES ('delete', old.id, old.content, old.name, old.file_path);
-			END
-		`);
-        this.db.exec(`
-			CREATE TRIGGER IF NOT EXISTS chunks_au AFTER UPDATE ON chunks BEGIN
-				INSERT INTO chunks_fts(chunks_fts, rowid, content, name, file_path)
-				VALUES ('delete', old.id, old.content, old.name, old.file_path);
-				INSERT INTO chunks_fts(rowid, content, name, file_path)
-				VALUES (new.id, new.content, new.name, new.file_path);
-			END
-		`);
-        // Embeddings table (keyed by model name for multi-model support)
-        this.db.exec(`
-			CREATE TABLE IF NOT EXISTS embeddings (
-				chunk_id INTEGER NOT NULL REFERENCES chunks(id) ON DELETE CASCADE,
-				model_name TEXT NOT NULL,
-				vector BLOB NOT NULL,
-				PRIMARY KEY (chunk_id, model_name)
-			)
-		`);
-        // Imports table (import graph edges between files)
-        this.db.exec(`
-			CREATE TABLE IF NOT EXISTS imports (
-				source_file_id INTEGER NOT NULL REFERENCES files(id) ON DELETE CASCADE,
-				target_file_path TEXT NOT NULL,
-				PRIMARY KEY (source_file_id, target_file_path)
-			)
-		`);
-        this.db.exec("CREATE INDEX IF NOT EXISTS idx_imports_target ON imports(target_file_path)");
-        // Symbols table (symbol names extracted from chunks)
-        this.db.exec(`
-			CREATE TABLE IF NOT EXISTS symbols (
-				chunk_id INTEGER NOT NULL REFERENCES chunks(id) ON DELETE CASCADE,
-				name TEXT NOT NULL,
-				kind TEXT NOT NULL
-			)
-		`);
-        this.db.exec("CREATE INDEX IF NOT EXISTS idx_symbols_name ON symbols(name)");
-        // Set schema version
-        this.db
-            .prepare("INSERT OR REPLACE INTO meta (key, value) VALUES ('schema_version', ?)")
-            .run(String(SCHEMA_VERSION));
-    }
-    // ========================================================================
-    // Files
-    // ========================================================================
-    /** Insert or update a file record. Returns the file ID. */
-    upsertFile(filePath, mtime, fileType) {
-        const existing = this.db.prepare("SELECT id FROM files WHERE file_path = ?").get(filePath);
-        if (existing) {
-            this.db.prepare("UPDATE files SET mtime = ?, file_type = ? WHERE id = ?").run(mtime, fileType, existing.id);
-            return existing.id;
-        }
-        const result = this.db
-            .prepare("INSERT INTO files (file_path, mtime, file_type) VALUES (?, ?, ?)")
-            .run(filePath, mtime, fileType);
-        return Number(result.lastInsertRowid);
-    }
-    /** Get a file by path. */
-    getFile(filePath) {
-        const row = this.db
-            .prepare("SELECT id, file_path, mtime, file_type FROM files WHERE file_path = ?")
-            .get(filePath);
-        if (!row)
-            return null;
-        return { id: row.id, filePath: row.file_path, mtime: row.mtime, fileType: row.file_type };
-    }
-    /** Get all indexed files. */
-    getAllFiles() {
-        const rows = this.db.prepare("SELECT id, file_path, mtime, file_type FROM files").all();
-        return rows.map((r) => ({
-            id: r.id,
-            filePath: r.file_path,
-            mtime: r.mtime,
-            fileType: r.file_type,
-        }));
-    }
-    /** Delete a file and all its chunks/embeddings/symbols (cascading). */
-    deleteFile(fileId) {
-        this.db.prepare("DELETE FROM files WHERE id = ?").run(fileId);
-    }
-    // ========================================================================
-    // Chunks
-    // ========================================================================
-    /** Insert a chunk. Returns the chunk ID. */
-    insertChunk(fileId, filePath, startLine, endLine, kind, name, content, fileType) {
-        const result = this.db
-            .prepare("INSERT INTO chunks (file_id, file_path, start_line, end_line, kind, name, content, file_type) VALUES (?, ?, ?, ?, ?, ?, ?, ?)")
-            .run(fileId, filePath, startLine, endLine, kind, name, content, fileType);
-        return Number(result.lastInsertRowid);
-    }
-    /** Delete all chunks for a file. */
-    deleteChunksForFile(fileId) {
-        this.db.prepare("DELETE FROM chunks WHERE file_id = ?").run(fileId);
-    }
-    /** Get all chunks. */
-    getAllChunks() {
-        const rows = this.db
-            .prepare("SELECT id, file_id, file_path, start_line, end_line, kind, name, content, file_type FROM chunks")
-            .all();
-        return rows.map((r) => this.rowToChunk(r));
-    }
-    /** Get chunks by file ID. */
-    getChunksByFileId(fileId) {
-        const rows = this.db
-            .prepare("SELECT id, file_id, file_path, start_line, end_line, kind, name, content, file_type FROM chunks WHERE file_id = ?")
-            .all(fileId);
-        return rows.map((r) => this.rowToChunk(r));
-    }
-    /** Get a chunk by ID. */
-    getChunk(chunkId) {
-        const row = this.db
-            .prepare("SELECT id, file_id, file_path, start_line, end_line, kind, name, content, file_type FROM chunks WHERE id = ?")
-            .get(chunkId);
-        if (!row)
-            return null;
-        return this.rowToChunk(row);
-    }
-    /** Get multiple chunks by IDs. Batches queries to avoid exceeding SQLite's bind variable limit. */
-    getChunksById(chunkIds) {
-        if (chunkIds.length === 0)
-            return [];
-        const BATCH_SIZE = 500;
-        const results = [];
-        for (let i = 0; i < chunkIds.length; i += BATCH_SIZE) {
-            const batch = chunkIds.slice(i, i + BATCH_SIZE);
-            const placeholders = batch.map(() => "?").join(",");
-            const rows = this.db
-                .prepare(`SELECT id, file_id, file_path, start_line, end_line, kind, name, content, file_type FROM chunks WHERE id IN (${placeholders})`)
-                .all(...batch);
-            for (const r of rows) {
-                results.push(this.rowToChunk(r));
-            }
-        }
-        return results;
-    }
-    rowToChunk(r) {
-        return {
-            id: r.id,
-            fileId: r.file_id,
-            filePath: r.file_path,
-            startLine: r.start_line,
-            endLine: r.end_line,
-            kind: r.kind,
-            name: r.name,
-            content: r.content,
-            fileType: r.file_type,
-        };
-    }
-    // ========================================================================
-    // Embeddings
-    // ========================================================================
-    /** Store an embedding vector for a chunk. */
-    upsertEmbedding(chunkId, modelName, vector) {
-        const blob = Buffer.from(vector.buffer, vector.byteOffset, vector.byteLength);
-        this.db
-            .prepare("INSERT OR REPLACE INTO embeddings (chunk_id, model_name, vector) VALUES (?, ?, ?)")
-            .run(chunkId, modelName, blob);
-    }
-    /** Batch insert embeddings. Uses a transaction for performance. */
-    batchUpsertEmbeddings(items) {
-        const stmt = this.db.prepare("INSERT OR REPLACE INTO embeddings (chunk_id, model_name, vector) VALUES (?, ?, ?)");
-        this.transaction(() => {
-            for (const item of items) {
-                const blob = Buffer.from(item.vector.buffer, item.vector.byteOffset, item.vector.byteLength);
-                stmt.run(item.chunkId, item.modelName, blob);
-            }
-        });
-    }
-    /** Get the embedding for a chunk. */
-    getEmbedding(chunkId, modelName) {
-        const row = this.db
-            .prepare("SELECT vector FROM embeddings WHERE chunk_id = ? AND model_name = ?")
-            .get(chunkId, modelName);
-        if (!row)
-            return null;
-        return unpackVector(row.vector);
-    }
-    /** Get all embeddings for a model. Returns map of chunkId → vector. */
-    getAllEmbeddings(modelName) {
-        const rows = this.db.prepare("SELECT chunk_id, vector FROM embeddings WHERE model_name = ?").all(modelName);
-        const map = new Map();
-        for (const row of rows) {
-            map.set(row.chunk_id, unpackVector(row.vector));
-        }
-        return map;
-    }
-    /** Get chunk IDs that have no embedding for a given model. */
-    getChunkIdsWithoutEmbedding(modelName) {
-        const rows = this.db
-            .prepare(`SELECT c.id FROM chunks c
-				 LEFT JOIN embeddings e ON c.id = e.chunk_id AND e.model_name = ?
-				 WHERE e.chunk_id IS NULL`)
-            .all(modelName);
-        return rows.map((r) => r.id);
-    }
-    // ========================================================================
-    // FTS5
-    // ========================================================================
-    /** Rebuild the FTS5 index (use after bulk operations). */
-    rebuildFts() {
-        this.db.exec("INSERT INTO chunks_fts(chunks_fts) VALUES ('rebuild')");
-    }
-    /**
-     * Search via FTS5 with BM25 ranking.
-     * Returns chunk IDs with their BM25 scores (negated so higher = better).
-     */
-    ftsSearch(query, limit) {
-        try {
-            const rows = this.db
-                .prepare(`SELECT chunks_fts.rowid as chunk_id, -bm25(chunks_fts, 1.0, 10.0, 5.0) as score
-					 FROM chunks_fts
-					 WHERE chunks_fts MATCH ?
-					 ORDER BY score DESC
-					 LIMIT ?`)
-                .all(query, limit);
-            return rows.map((r) => ({ chunkId: r.chunk_id, score: r.score }));
-        }
-        catch {
-            // FTS5 MATCH can fail on malformed queries
-            return [];
-        }
-    }
-    // ========================================================================
-    // Imports
-    // ========================================================================
-    /** Record an import edge. */
-    insertImport(sourceFileId, targetFilePath) {
-        this.db
-            .prepare("INSERT OR IGNORE INTO imports (source_file_id, target_file_path) VALUES (?, ?)")
-            .run(sourceFileId, targetFilePath);
-    }
-    /** Delete all imports for a source file. */
-    deleteImportsForFile(sourceFileId) {
-        this.db.prepare("DELETE FROM imports WHERE source_file_id = ?").run(sourceFileId);
-    }
-    /** Get files imported by a given source file. */
-    getImportsFrom(sourceFileId) {
-        const rows = this.db.prepare("SELECT target_file_path FROM imports WHERE source_file_id = ?").all(sourceFileId);
-        return rows.map((r) => r.target_file_path);
-    }
-    /** Get file IDs that import a given target path. */
-    getImportersOf(targetFilePath) {
-        const rows = this.db.prepare("SELECT source_file_id FROM imports WHERE target_file_path = ?").all(targetFilePath);
-        return rows.map((r) => r.source_file_id);
-    }
-    /** Get all import edges. */
-    getAllImports() {
-        const rows = this.db.prepare("SELECT source_file_id, target_file_path FROM imports").all();
-        return rows.map((r) => ({ sourceFileId: r.source_file_id, targetFilePath: r.target_file_path }));
-    }
-    // ========================================================================
-    // Symbols
-    // ========================================================================
-    /** Insert a symbol. */
-    insertSymbol(chunkId, name, kind) {
-        this.db.prepare("INSERT INTO symbols (chunk_id, name, kind) VALUES (?, ?, ?)").run(chunkId, name, kind);
-    }
-    /** Delete symbols for a chunk. */
-    deleteSymbolsForChunk(chunkId) {
-        this.db.prepare("DELETE FROM symbols WHERE chunk_id = ?").run(chunkId);
-    }
-    /** Get all symbols. Returns map of chunkId → symbol names. */
-    getAllSymbols() {
-        const rows = this.db.prepare("SELECT chunk_id, name FROM symbols").all();
-        const map = new Map();
-        for (const row of rows) {
-            const existing = map.get(row.chunk_id);
-            if (existing)
-                existing.push(row.name);
-            else
-                map.set(row.chunk_id, [row.name]);
-        }
-        return map;
-    }
-    // ========================================================================
-    // Transaction Helpers
-    // ========================================================================
-    /** Run a function inside a transaction. */
-    transaction(fn) {
-        this.db.exec("BEGIN");
-        try {
-            const result = fn();
-            this.db.exec("COMMIT");
-            return result;
-        }
-        catch (err) {
-            this.db.exec("ROLLBACK");
-            throw err;
-        }
-    }
-    /** Get the total number of chunks. */
-    getChunkCount() {
-        const row = this.db.prepare("SELECT COUNT(*) as count FROM chunks").get();
-        return row.count;
-    }
-    /** Get the total number of files. */
-    getFileCount() {
-        const row = this.db.prepare("SELECT COUNT(*) as count FROM files").get();
-        return row.count;
-    }
-    /** Close the database connection. */
-    close() {
-        this.db.close();
-    }
-}
-//# sourceMappingURL=db.js.map

package/dist/core/search/db.js.map

@@ -1 +0,0 @@
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* SQLite database abstraction for the search index.\n *\n * Uses `node:sqlite` (built-in Node 22+). Feature-gated — callers must check\n * availability via `isSqliteAvailable()` before constructing a SearchDatabase.\n */\n\nimport { createRequire } from \"node:module\";\nimport type { ChunkKind, FileType, IndexedFile, StoredChunk } from \"./types.js\";\nimport { unpackVector } from \"./vector-store.js\";\n\n// ============================================================================\n// Availability Check\n// ============================================================================\n\nconst require = createRequire(import.meta.url);\nlet _sqliteAvailable: boolean | null = null;\n\n/** Check whether `node:sqlite` is available in this Node.js runtime. */\nexport function isSqliteAvailable(): boolean {\n\tif (_sqliteAvailable !== null) return _sqliteAvailable;\n\ttry {\n\t\trequire(\"node:sqlite\");\n\t\t_sqliteAvailable = true;\n\t} catch {\n\t\t_sqliteAvailable = false;\n\t}\n\treturn _sqliteAvailable;\n}\n\n// ============================================================================\n// Schema Version\n// ============================================================================\n\nconst SCHEMA_VERSION = 1;\n\n// ============================================================================\n// Database\n// ============================================================================\n\n/** Wrapper around `node:sqlite` DatabaseSync for the search index. */\nexport class SearchDatabase {\n\tprivate db: any; // DatabaseSync from node:sqlite\n\n\tconstructor(dbPath: string) {\n\t\t// Import synchronously — caller must have verified availability\n\t\tconst { DatabaseSync } = require(\"node:sqlite\");\n\t\tthis.db = new DatabaseSync(dbPath);\n\t\tthis.db.exec(\"PRAGMA journal_mode=WAL\");\n\t\tthis.db.exec(\"PRAGMA synchronous=NORMAL\");\n\t\tthis.db.exec(\"PRAGMA foreign_keys=ON\");\n\t\tthis.initSchema();\n\t}\n\n\t/** Create or migrate the database schema. */\n\tprivate initSchema(): void {\n\t\t// Check schema version\n\t\tthis.db.exec(\"CREATE TABLE IF NOT EXISTS meta (key TEXT PRIMARY KEY, value TEXT)\");\n\t\tconst versionRow = this.db.prepare(\"SELECT value FROM meta WHERE key = 'schema_version'\").get();\n\t\tconst currentVersion = versionRow ? Number.parseInt(versionRow.value, 10) : 0;\n\n\t\tif (currentVersion >= SCHEMA_VERSION) return;\n\n\t\t// Files table\n\t\tthis.db.exec(`\n\t\t\tCREATE TABLE IF NOT EXISTS files (\n\t\t\t\tid INTEGER PRIMARY KEY AUTOINCREMENT,\n\t\t\t\tfile_path TEXT NOT NULL UNIQUE,\n\t\t\t\tmtime REAL NOT NULL,\n\t\t\t\tfile_type TEXT NOT NULL\n\t\t\t)\n\t\t`);\n\n\t\t// Chunks table\n\t\tthis.db.exec(`\n\t\t\tCREATE TABLE IF NOT EXISTS chunks (\n\t\t\t\tid INTEGER PRIMARY KEY AUTOINCREMENT,\n\t\t\t\tfile_id INTEGER NOT NULL REFERENCES files(id) ON DELETE CASCADE,\n\t\t\t\tfile_path TEXT NOT NULL,\n\t\t\t\tstart_line INTEGER NOT NULL,\n\t\t\t\tend_line INTEGER NOT NULL,\n\t\t\t\tkind TEXT NOT NULL,\n\t\t\t\tname TEXT,\n\t\t\t\tcontent TEXT NOT NULL,\n\t\t\t\tfile_type TEXT NOT NULL\n\t\t\t)\n\t\t`);\n\t\tthis.db.exec(\"CREATE INDEX IF NOT EXISTS idx_chunks_file_id ON chunks(file_id)\");\n\t\tthis.db.exec(\"CREATE INDEX IF NOT EXISTS idx_chunks_file_path ON chunks(file_path)\");\n\n\t\t// FTS5 virtual table (content-synced with chunks)\n\t\tthis.db.exec(`\n\t\t\tCREATE VIRTUAL TABLE IF NOT EXISTS chunks_fts USING fts5(\n\t\t\t\tcontent,\n\t\t\t\tname,\n\t\t\t\tfile_path,\n\t\t\t\tcontent='chunks',\n\t\t\t\tcontent_rowid='id',\n\t\t\t\ttokenize='porter unicode61'\n\t\t\t)\n\t\t`);\n\n\t\t// FTS triggers for incremental updates\n\t\tthis.db.exec(`\n\t\t\tCREATE TRIGGER IF NOT EXISTS chunks_ai AFTER INSERT ON chunks BEGIN\n\t\t\t\tINSERT INTO chunks_fts(rowid, content, name, file_path)\n\t\t\t\tVALUES (new.id, new.content, new.name, new.file_path);\n\t\t\tEND\n\t\t`);\n\t\tthis.db.exec(`\n\t\t\tCREATE TRIGGER IF NOT EXISTS chunks_ad AFTER DELETE ON chunks BEGIN\n\t\t\t\tINSERT INTO chunks_fts(chunks_fts, rowid, content, name, file_path)\n\t\t\t\tVALUES ('delete', old.id, old.content, old.name, old.file_path);\n\t\t\tEND\n\t\t`);\n\t\tthis.db.exec(`\n\t\t\tCREATE TRIGGER IF NOT EXISTS chunks_au AFTER UPDATE ON chunks BEGIN\n\t\t\t\tINSERT INTO chunks_fts(chunks_fts, rowid, content, name, file_path)\n\t\t\t\tVALUES ('delete', old.id, old.content, old.name, old.file_path);\n\t\t\t\tINSERT INTO chunks_fts(rowid, content, name, file_path)\n\t\t\t\tVALUES (new.id, new.content, new.name, new.file_path);\n\t\t\tEND\n\t\t`);\n\n\t\t// Embeddings table (keyed by model name for multi-model support)\n\t\tthis.db.exec(`\n\t\t\tCREATE TABLE IF NOT EXISTS embeddings (\n\t\t\t\tchunk_id INTEGER NOT NULL REFERENCES chunks(id) ON DELETE CASCADE,\n\t\t\t\tmodel_name TEXT NOT NULL,\n\t\t\t\tvector BLOB NOT NULL,\n\t\t\t\tPRIMARY KEY (chunk_id, model_name)\n\t\t\t)\n\t\t`);\n\n\t\t// Imports table (import graph edges between files)\n\t\tthis.db.exec(`\n\t\t\tCREATE TABLE IF NOT EXISTS imports (\n\t\t\t\tsource_file_id INTEGER NOT NULL REFERENCES files(id) ON DELETE CASCADE,\n\t\t\t\ttarget_file_path TEXT NOT NULL,\n\t\t\t\tPRIMARY KEY (source_file_id, target_file_path)\n\t\t\t)\n\t\t`);\n\t\tthis.db.exec(\"CREATE INDEX IF NOT EXISTS idx_imports_target ON imports(target_file_path)\");\n\n\t\t// Symbols table (symbol names extracted from chunks)\n\t\tthis.db.exec(`\n\t\t\tCREATE TABLE IF NOT EXISTS symbols (\n\t\t\t\tchunk_id INTEGER NOT NULL REFERENCES chunks(id) ON DELETE CASCADE,\n\t\t\t\tname TEXT NOT NULL,\n\t\t\t\tkind TEXT NOT NULL\n\t\t\t)\n\t\t`);\n\t\tthis.db.exec(\"CREATE INDEX IF NOT EXISTS idx_symbols_name ON symbols(name)\");\n\n\t\t// Set schema version\n\t\tthis.db\n\t\t\t.prepare(\"INSERT OR REPLACE INTO meta (key, value) VALUES ('schema_version', ?)\")\n\t\t\t.run(String(SCHEMA_VERSION));\n\t}\n\n\t// ========================================================================\n\t// Files\n\t// ========================================================================\n\n\t/** Insert or update a file record. Returns the file ID. */\n\tupsertFile(filePath: string, mtime: number, fileType: FileType): number {\n\t\tconst existing = this.db.prepare(\"SELECT id FROM files WHERE file_path = ?\").get(filePath);\n\t\tif (existing) {\n\t\t\tthis.db.prepare(\"UPDATE files SET mtime = ?, file_type = ? WHERE id = ?\").run(mtime, fileType, existing.id);\n\t\t\treturn existing.id;\n\t\t}\n\t\tconst result = this.db\n\t\t\t.prepare(\"INSERT INTO files (file_path, mtime, file_type) VALUES (?, ?, ?)\")\n\t\t\t.run(filePath, mtime, fileType);\n\t\treturn Number(result.lastInsertRowid);\n\t}\n\n\t/** Get a file by path. */\n\tgetFile(filePath: string): IndexedFile | null {\n\t\tconst row = this.db\n\t\t\t.prepare(\"SELECT id, file_path, mtime, file_type FROM files WHERE file_path = ?\")\n\t\t\t.get(filePath);\n\t\tif (!row) return null;\n\t\treturn { id: row.id, filePath: row.file_path, mtime: row.mtime, fileType: row.file_type as FileType };\n\t}\n\n\t/** Get all indexed files. */\n\tgetAllFiles(): IndexedFile[] {\n\t\tconst rows = this.db.prepare(\"SELECT id, file_path, mtime, file_type FROM files\").all();\n\t\treturn rows.map((r: any) => ({\n\t\t\tid: r.id,\n\t\t\tfilePath: r.file_path,\n\t\t\tmtime: r.mtime,\n\t\t\tfileType: r.file_type as FileType,\n\t\t}));\n\t}\n\n\t/** Delete a file and all its chunks/embeddings/symbols (cascading). */\n\tdeleteFile(fileId: number): void {\n\t\tthis.db.prepare(\"DELETE FROM files WHERE id = ?\").run(fileId);\n\t}\n\n\t// ========================================================================\n\t// Chunks\n\t// ========================================================================\n\n\t/** Insert a chunk. Returns the chunk ID. */\n\tinsertChunk(\n\t\tfileId: number,\n\t\tfilePath: string,\n\t\tstartLine: number,\n\t\tendLine: number,\n\t\tkind: ChunkKind,\n\t\tname: string | null,\n\t\tcontent: string,\n\t\tfileType: FileType,\n\t): number {\n\t\tconst result = this.db\n\t\t\t.prepare(\n\t\t\t\t\"INSERT INTO chunks (file_id, file_path, start_line, end_line, kind, name, content, file_type) VALUES (?, ?, ?, ?, ?, ?, ?, ?)\",\n\t\t\t)\n\t\t\t.run(fileId, filePath, startLine, endLine, kind, name, content, fileType);\n\t\treturn Number(result.lastInsertRowid);\n\t}\n\n\t/** Delete all chunks for a file. */\n\tdeleteChunksForFile(fileId: number): void {\n\t\tthis.db.prepare(\"DELETE FROM chunks WHERE file_id = ?\").run(fileId);\n\t}\n\n\t/** Get all chunks. */\n\tgetAllChunks(): StoredChunk[] {\n\t\tconst rows = this.db\n\t\t\t.prepare(\"SELECT id, file_id, file_path, start_line, end_line, kind, name, content, file_type FROM chunks\")\n\t\t\t.all();\n\t\treturn rows.map((r: any) => this.rowToChunk(r));\n\t}\n\n\t/** Get chunks by file ID. */\n\tgetChunksByFileId(fileId: number): StoredChunk[] {\n\t\tconst rows = this.db\n\t\t\t.prepare(\n\t\t\t\t\"SELECT id, file_id, file_path, start_line, end_line, kind, name, content, file_type FROM chunks WHERE file_id = ?\",\n\t\t\t)\n\t\t\t.all(fileId);\n\t\treturn rows.map((r: any) => this.rowToChunk(r));\n\t}\n\n\t/** Get a chunk by ID. */\n\tgetChunk(chunkId: number): StoredChunk | null {\n\t\tconst row = this.db\n\t\t\t.prepare(\n\t\t\t\t\"SELECT id, file_id, file_path, start_line, end_line, kind, name, content, file_type FROM chunks WHERE id = ?\",\n\t\t\t)\n\t\t\t.get(chunkId);\n\t\tif (!row) return null;\n\t\treturn this.rowToChunk(row);\n\t}\n\n\t/** Get multiple chunks by IDs. Batches queries to avoid exceeding SQLite's bind variable limit. */\n\tgetChunksById(chunkIds: number[]): StoredChunk[] {\n\t\tif (chunkIds.length === 0) return [];\n\n\t\tconst BATCH_SIZE = 500;\n\t\tconst results: StoredChunk[] = [];\n\n\t\tfor (let i = 0; i < chunkIds.length; i += BATCH_SIZE) {\n\t\t\tconst batch = chunkIds.slice(i, i + BATCH_SIZE);\n\t\t\tconst placeholders = batch.map(() => \"?\").join(\",\");\n\t\t\tconst rows = this.db\n\t\t\t\t.prepare(\n\t\t\t\t\t`SELECT id, file_id, file_path, start_line, end_line, kind, name, content, file_type FROM chunks WHERE id IN (${placeholders})`,\n\t\t\t\t)\n\t\t\t\t.all(...batch);\n\t\t\tfor (const r of rows) {\n\t\t\t\tresults.push(this.rowToChunk(r));\n\t\t\t}\n\t\t}\n\n\t\treturn results;\n\t}\n\n\tprivate rowToChunk(r: any): StoredChunk {\n\t\treturn {\n\t\t\tid: r.id,\n\t\t\tfileId: r.file_id,\n\t\t\tfilePath: r.file_path,\n\t\t\tstartLine: r.start_line,\n\t\t\tendLine: r.end_line,\n\t\t\tkind: r.kind as ChunkKind,\n\t\t\tname: r.name,\n\t\t\tcontent: r.content,\n\t\t\tfileType: r.file_type as FileType,\n\t\t};\n\t}\n\n\t// ========================================================================\n\t// Embeddings\n\t// ========================================================================\n\n\t/** Store an embedding vector for a chunk. */\n\tupsertEmbedding(chunkId: number, modelName: string, vector: Float32Array): void {\n\t\tconst blob = Buffer.from(vector.buffer, vector.byteOffset, vector.byteLength);\n\t\tthis.db\n\t\t\t.prepare(\"INSERT OR REPLACE INTO embeddings (chunk_id, model_name, vector) VALUES (?, ?, ?)\")\n\t\t\t.run(chunkId, modelName, blob);\n\t}\n\n\t/** Batch insert embeddings. Uses a transaction for performance. */\n\tbatchUpsertEmbeddings(items: Array<{ chunkId: number; modelName: string; vector: Float32Array }>): void {\n\t\tconst stmt = this.db.prepare(\"INSERT OR REPLACE INTO embeddings (chunk_id, model_name, vector) VALUES (?, ?, ?)\");\n\t\tthis.transaction(() => {\n\t\t\tfor (const item of items) {\n\t\t\t\tconst blob = Buffer.from(item.vector.buffer, item.vector.byteOffset, item.vector.byteLength);\n\t\t\t\tstmt.run(item.chunkId, item.modelName, blob);\n\t\t\t}\n\t\t});\n\t}\n\n\t/** Get the embedding for a chunk. */\n\tgetEmbedding(chunkId: number, modelName: string): Float32Array | null {\n\t\tconst row = this.db\n\t\t\t.prepare(\"SELECT vector FROM embeddings WHERE chunk_id = ? AND model_name = ?\")\n\t\t\t.get(chunkId, modelName);\n\t\tif (!row) return null;\n\t\treturn unpackVector(row.vector);\n\t}\n\n\t/** Get all embeddings for a model. Returns map of chunkId → vector. */\n\tgetAllEmbeddings(modelName: string): Map<number, Float32Array> {\n\t\tconst rows = this.db.prepare(\"SELECT chunk_id, vector FROM embeddings WHERE model_name = ?\").all(modelName);\n\t\tconst map = new Map<number, Float32Array>();\n\t\tfor (const row of rows) {\n\t\t\tmap.set(row.chunk_id, unpackVector(row.vector));\n\t\t}\n\t\treturn map;\n\t}\n\n\t/** Get chunk IDs that have no embedding for a given model. */\n\tgetChunkIdsWithoutEmbedding(modelName: string): number[] {\n\t\tconst rows = this.db\n\t\t\t.prepare(\n\t\t\t\t`SELECT c.id FROM chunks c\n\t\t\t\t LEFT JOIN embeddings e ON c.id = e.chunk_id AND e.model_name = ?\n\t\t\t\t WHERE e.chunk_id IS NULL`,\n\t\t\t)\n\t\t\t.all(modelName);\n\t\treturn rows.map((r: any) => r.id);\n\t}\n\n\t// ========================================================================\n\t// FTS5\n\t// ========================================================================\n\n\t/** Rebuild the FTS5 index (use after bulk operations). */\n\trebuildFts(): void {\n\t\tthis.db.exec(\"INSERT INTO chunks_fts(chunks_fts) VALUES ('rebuild')\");\n\t}\n\n\t/**\n\t * Search via FTS5 with BM25 ranking.\n\t * Returns chunk IDs with their BM25 scores (negated so higher = better).\n\t */\n\tftsSearch(query: string, limit: number): Array<{ chunkId: number; score: number }> {\n\t\ttry {\n\t\t\tconst rows = this.db\n\t\t\t\t.prepare(\n\t\t\t\t\t`SELECT chunks_fts.rowid as chunk_id, -bm25(chunks_fts, 1.0, 10.0, 5.0) as score\n\t\t\t\t\t FROM chunks_fts\n\t\t\t\t\t WHERE chunks_fts MATCH ?\n\t\t\t\t\t ORDER BY score DESC\n\t\t\t\t\t LIMIT ?`,\n\t\t\t\t)\n\t\t\t\t.all(query, limit);\n\t\t\treturn rows.map((r: any) => ({ chunkId: r.chunk_id, score: r.score }));\n\t\t} catch {\n\t\t\t// FTS5 MATCH can fail on malformed queries\n\t\t\treturn [];\n\t\t}\n\t}\n\n\t// ========================================================================\n\t// Imports\n\t// ========================================================================\n\n\t/** Record an import edge. */\n\tinsertImport(sourceFileId: number, targetFilePath: string): void {\n\t\tthis.db\n\t\t\t.prepare(\"INSERT OR IGNORE INTO imports (source_file_id, target_file_path) VALUES (?, ?)\")\n\t\t\t.run(sourceFileId, targetFilePath);\n\t}\n\n\t/** Delete all imports for a source file. */\n\tdeleteImportsForFile(sourceFileId: number): void {\n\t\tthis.db.prepare(\"DELETE FROM imports WHERE source_file_id = ?\").run(sourceFileId);\n\t}\n\n\t/** Get files imported by a given source file. */\n\tgetImportsFrom(sourceFileId: number): string[] {\n\t\tconst rows = this.db.prepare(\"SELECT target_file_path FROM imports WHERE source_file_id = ?\").all(sourceFileId);\n\t\treturn rows.map((r: any) => r.target_file_path);\n\t}\n\n\t/** Get file IDs that import a given target path. */\n\tgetImportersOf(targetFilePath: string): number[] {\n\t\tconst rows = this.db.prepare(\"SELECT source_file_id FROM imports WHERE target_file_path = ?\").all(targetFilePath);\n\t\treturn rows.map((r: any) => r.source_file_id);\n\t}\n\n\t/** Get all import edges. */\n\tgetAllImports(): Array<{ sourceFileId: number; targetFilePath: string }> {\n\t\tconst rows = this.db.prepare(\"SELECT source_file_id, target_file_path FROM imports\").all();\n\t\treturn rows.map((r: any) => ({ sourceFileId: r.source_file_id, targetFilePath: r.target_file_path }));\n\t}\n\n\t// ========================================================================\n\t// Symbols\n\t// ========================================================================\n\n\t/** Insert a symbol. */\n\tinsertSymbol(chunkId: number, name: string, kind: string): void {\n\t\tthis.db.prepare(\"INSERT INTO symbols (chunk_id, name, kind) VALUES (?, ?, ?)\").run(chunkId, name, kind);\n\t}\n\n\t/** Delete symbols for a chunk. */\n\tdeleteSymbolsForChunk(chunkId: number): void {\n\t\tthis.db.prepare(\"DELETE FROM symbols WHERE chunk_id = ?\").run(chunkId);\n\t}\n\n\t/** Get all symbols. Returns map of chunkId → symbol names. */\n\tgetAllSymbols(): Map<number, string[]> {\n\t\tconst rows = this.db.prepare(\"SELECT chunk_id, name FROM symbols\").all();\n\t\tconst map = new Map<number, string[]>();\n\t\tfor (const row of rows) {\n\t\t\tconst existing = map.get(row.chunk_id);\n\t\t\tif (existing) existing.push(row.name);\n\t\t\telse map.set(row.chunk_id, [row.name]);\n\t\t}\n\t\treturn map;\n\t}\n\n\t// ========================================================================\n\t// Transaction Helpers\n\t// ========================================================================\n\n\t/** Run a function inside a transaction. */\n\ttransaction<T>(fn: () => T): T {\n\t\tthis.db.exec(\"BEGIN\");\n\t\ttry {\n\t\t\tconst result = fn();\n\t\t\tthis.db.exec(\"COMMIT\");\n\t\t\treturn result;\n\t\t} catch (err) {\n\t\t\tthis.db.exec(\"ROLLBACK\");\n\t\t\tthrow err;\n\t\t}\n\t}\n\n\t/** Get the total number of chunks. */\n\tgetChunkCount(): number {\n\t\tconst row = this.db.prepare(\"SELECT COUNT(*) as count FROM chunks\").get();\n\t\treturn row.count;\n\t}\n\n\t/** Get the total number of files. */\n\tgetFileCount(): number {\n\t\tconst row = this.db.prepare(\"SELECT COUNT(*) as count FROM files\").get();\n\t\treturn row.count;\n\t}\n\n\t/** Close the database connection. */\n\tclose(): void {\n\t\tthis.db.close();\n\t}\n}\n"]}

package/dist/core/search/embedder.d.ts

@@ -1,52 +0,0 @@
-/**
- * Embedding pipeline using @huggingface/transformers.
- *
- * Generates normalized embeddings for semantic search. The embedding
- * dimension is derived at runtime from the model's actual output.
- * First use downloads the model (~23MB) to the configured cache directory.
- */
-import type { IndexProgressCallback } from "./types.js";
-export interface EmbedderOptions {
-    /** Absolute path to the model cache directory (e.g. ~/.dreb/agent/models/). */
-    modelCacheDir: string;
-    /** HuggingFace model name. Default: 'Xenova/all-MiniLM-L6-v2'. */
-    modelName?: string;
-    /** Number of texts to embed per batch. Default: 32. */
-    batchSize?: number;
-}
-export declare class Embedder {
-    private readonly modelCacheDir;
-    private readonly modelName;
-    private readonly batchSize;
-    private extractor;
-    private initPromise;
-    private resolvedDimension;
-    constructor(options: EmbedderOptions);
-    /**
-     * Initialize the model pipeline. Must be called before embedding.
-     *
-     * On first use this downloads the ONNX model to `modelCacheDir`.
-     * Subsequent calls reuse the cached model.
-     */
-    initialize(): Promise<void>;
-    /**
-     * Embed documents for indexing.
-     *
-     * Applies model-specific prefixes if required, then processes texts
-     * in batches of `batchSize` for memory efficiency.
-     */
-    embedDocuments(texts: string[], onProgress?: IndexProgressCallback): Promise<Float32Array[]>;
-    /**
-     * Embed a query for search.
-     *
-     * Applies model-specific query prefix if required.
-     */
-    embedQuery(query: string): Promise<Float32Array>;
-    /** Get the embedding dimension. Returns the model's actual dimension once known, or 384 as default. */
-    get dimension(): number;
-    /** Dispose the pipeline to free memory. */
-    dispose(): void;
-    /** Throw if initialize() hasn't been called yet. */
-    private ensureInitialized;
-}
-//# sourceMappingURL=embedder.d.ts.map

package/dist/core/search/embedder.d.ts.map

@@ -1 +0,0 @@
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The embedding\n * dimension is derived at runtime from the model's actual output.\n * First use downloads the model (~23MB) to the configured cache directory.\n */\n\nimport type { IndexProgressCallback } from \"./types.js\";\n\n// ============================================================================\n// Types\n// ============================================================================\n\nexport interface EmbedderOptions {\n\t/** Absolute path to the model cache directory (e.g. ~/.dreb/agent/models/). */\n\tmodelCacheDir: string;\n\t/** HuggingFace model name. Default: 'Xenova/all-MiniLM-L6-v2'. */\n\tmodelName?: string;\n\t/** Number of texts to embed per batch. Default: 32. */\n\tbatchSize?: number;\n}\n\n// ============================================================================\n// Constants\n// ============================================================================\n\nconst DEFAULT_MODEL_NAME = \"Xenova/all-MiniLM-L6-v2\";\nconst DEFAULT_BATCH_SIZE = 32;\nconst DEFAULT_DIMENSION = 384;\n\n/**\n * Model-specific prefixes for document vs query embeddings.\n * nomic-embed-text-v1.5 requires these; most other models don't.\n */\nconst MODEL_PREFIXES: Record<string, { document: string; query: string }> = {\n\t\"nomic-ai/nomic-embed-text-v1.5\": { document: \"search_document: \", query: \"search_query: \" },\n};\n\n// ============================================================================\n// Embedder\n// ============================================================================\n\nexport class Embedder {\n\tprivate readonly modelCacheDir: string;\n\tprivate readonly modelName: string;\n\tprivate readonly batchSize: number;\n\tprivate extractor: any | null = null;\n\tprivate initPromise: Promise<void> | null = null;\n\tprivate resolvedDimension: number | null = null;\n\n\tconstructor(options: EmbedderOptions) {\n\t\tthis.modelCacheDir = options.modelCacheDir;\n\t\tthis.modelName = options.modelName ?? DEFAULT_MODEL_NAME;\n\t\tthis.batchSize = options.batchSize ?? DEFAULT_BATCH_SIZE;\n\t}\n\n\t/**\n\t * Initialize the model pipeline. Must be called before embedding.\n\t *\n\t * On first use this downloads the ONNX model to `modelCacheDir`.\n\t * Subsequent calls reuse the cached model.\n\t */\n\tasync initialize(): Promise<void> {\n\t\tif (this.extractor) return;\n\t\tif (this.initPromise) return this.initPromise;\n\n\t\tthis.initPromise = (async () => {\n\t\t\ttry {\n\t\t\t\t// Dynamic import — @huggingface/transformers is a heavy dependency\n\t\t\t\tconst { pipeline, env } = await import(\"@huggingface/transformers\");\n\n\t\t\t\t// Direct the model cache to our managed directory\n\t\t\t\tenv.cacheDir = this.modelCacheDir;\n\n\t\t\t\t// Suppress the onnxruntime native addon warning — WASM fallback is fine\n\t\t\t\t// The library tries to load native onnxruntime first and logs a warning\n\t\t\t\t// when it falls back to WASM. We suppress this to avoid confusing users.\n\t\t\t\tconst originalWarn = console.warn;\n\t\t\t\tconsole.warn = (...args: any[]) => {\n\t\t\t\t\tconst msg = typeof args[0] === \"string\" ? args[0] : \"\";\n\t\t\t\t\tif (msg.includes(\"onnxruntime\") || msg.includes(\"ONNX\")) return;\n\t\t\t\t\toriginalWarn.apply(console, args);\n\t\t\t\t};\n\n\t\t\t\ttry {\n\t\t\t\t\tthis.extractor = await pipeline(\"feature-extraction\", this.modelName, {\n\t\t\t\t\t\tdtype: \"q8\" as any,\n\t\t\t\t\t\tdevice: \"cpu\" as any,\n\t\t\t\t\t});\n\t\t\t\t} finally {\n\t\t\t\t\tconsole.warn = originalWarn;\n\t\t\t\t}\n\t\t\t} catch (err) {\n\t\t\t\t// Reset so subsequent calls can retry instead of returning\n\t\t\t\t// the same rejected promise forever\n\t\t\t\tthis.initPromise = null;\n\t\t\t\tthrow err;\n\t\t\t}\n\t\t})();\n\n\t\treturn this.initPromise;\n\t}\n\n\t/**\n\t * Embed documents for indexing.\n\t *\n\t * Applies model-specific prefixes if required, then processes texts\n\t * in batches of `batchSize` for memory efficiency.\n\t */\n\tasync embedDocuments(texts: string[], onProgress?: IndexProgressCallback): Promise<Float32Array[]> {\n\t\tthis.ensureInitialized();\n\n\t\tconst results: Float32Array[] = [];\n\t\tconst total = texts.length;\n\t\tconst prefix = MODEL_PREFIXES[this.modelName]?.document ?? \"\";\n\n\t\tfor (let i = 0; i < total; i += this.batchSize) {\n\t\t\tconst batch = texts.slice(i, i + this.batchSize);\n\t\t\tconst prefixed = prefix ? batch.map((t) => prefix + t) : batch;\n\n\t\t\tconst output = await this.extractor!(prefixed, {\n\t\t\t\tpooling: \"mean\",\n\t\t\t\tnormalize: true,\n\t\t\t});\n\n\t\t\t// output.data is a flat Float32Array of shape [batchLen, dim]\n\t\t\tconst data: Float32Array = output.data;\n\t\t\tconst dim = data.length / batch.length;\n\t\t\tif (this.resolvedDimension === null) {\n\t\t\t\tthis.resolvedDimension = dim;\n\t\t\t}\n\t\t\tfor (let j = 0; j < batch.length; j++) {\n\t\t\t\tconst start = j * dim;\n\t\t\t\tresults.push(data.slice(start, start + dim));\n\t\t\t}\n\n\t\t\tif (onProgress) {\n\t\t\t\tonProgress(\"embedding\", Math.min(i + batch.length, total), total);\n\t\t\t}\n\t\t}\n\n\t\treturn results;\n\t}\n\n\t/**\n\t * Embed a query for search.\n\t *\n\t * Applies model-specific query prefix if required.\n\t */\n\tasync embedQuery(query: string): Promise<Float32Array> {\n\t\tthis.ensureInitialized();\n\n\t\tconst prefix = MODEL_PREFIXES[this.modelName]?.query ?? \"\";\n\t\tconst output = await this.extractor!(prefix + query, {\n\t\t\tpooling: \"mean\",\n\t\t\tnormalize: true,\n\t\t});\n\n\t\t// Single input — derive dimension and slice to exactly one vector\n\t\tconst data: Float32Array = output.data;\n\t\tconst dim = data.length;\n\t\tif (this.resolvedDimension === null) {\n\t\t\tthis.resolvedDimension = dim;\n\t\t}\n\t\treturn data.slice(0, dim);\n\t}\n\n\t/** Get the embedding dimension. Returns the model's actual dimension once known, or 384 as default. */\n\tget dimension(): number {\n\t\treturn this.resolvedDimension ?? DEFAULT_DIMENSION;\n\t}\n\n\t/** Dispose the pipeline to free memory. */\n\tdispose(): void {\n\t\tif (this.extractor) {\n\t\t\t// The pipeline object may have a dispose method depending on the version\n\t\t\tif (typeof this.extractor.dispose === \"function\") {\n\t\t\t\tthis.extractor.dispose();\n\t\t\t}\n\t\t\tthis.extractor = null;\n\t\t}\n\t\tthis.initPromise = null;\n\t}\n\n\t/** Throw if initialize() hasn't been called yet. */\n\tprivate ensureInitialized(): void {\n\t\tif (!this.extractor) {\n\t\t\tthrow new Error(\"Embedder not initialized. Call initialize() first.\");\n\t\t}\n\t}\n}\n"]}