@dreb/coding-agent 1.16.0 → 2.0.0

package/dist/core/search/db.js.map

@@ -1 +0,0 @@
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* SQLite database abstraction for the search index.\n *\n * Uses `node:sqlite` (built-in Node 22+). Feature-gated — callers must check\n * availability via `isSqliteAvailable()` before constructing a SearchDatabase.\n */\n\nimport { createRequire } from \"node:module\";\nimport type { ChunkKind, FileType, IndexedFile, StoredChunk } from \"./types.js\";\nimport { unpackVector } from \"./vector-store.js\";\n\n// ============================================================================\n// Availability Check\n// ============================================================================\n\nconst require = createRequire(import.meta.url);\nlet _sqliteAvailable: boolean | null = null;\n\n/** Check whether `node:sqlite` is available in this Node.js runtime. */\nexport function isSqliteAvailable(): boolean {\n\tif (_sqliteAvailable !== null) return _sqliteAvailable;\n\ttry {\n\t\trequire(\"node:sqlite\");\n\t\t_sqliteAvailable = true;\n\t} catch {\n\t\t_sqliteAvailable = false;\n\t}\n\treturn _sqliteAvailable;\n}\n\n// ============================================================================\n// Schema Version\n// ============================================================================\n\nconst SCHEMA_VERSION = 1;\n\n// ============================================================================\n// Database\n// ============================================================================\n\n/** Wrapper around `node:sqlite` DatabaseSync for the search index. */\nexport class SearchDatabase {\n\tprivate db: any; // DatabaseSync from node:sqlite\n\n\tconstructor(dbPath: string) {\n\t\t// Import synchronously — caller must have verified availability\n\t\tconst { DatabaseSync } = require(\"node:sqlite\");\n\t\tthis.db = new DatabaseSync(dbPath);\n\t\tthis.db.exec(\"PRAGMA journal_mode=WAL\");\n\t\tthis.db.exec(\"PRAGMA synchronous=NORMAL\");\n\t\tthis.db.exec(\"PRAGMA foreign_keys=ON\");\n\t\tthis.initSchema();\n\t}\n\n\t/** Create or migrate the database schema. */\n\tprivate initSchema(): void {\n\t\t// Check schema version\n\t\tthis.db.exec(\"CREATE TABLE IF NOT EXISTS meta (key TEXT PRIMARY KEY, value TEXT)\");\n\t\tconst versionRow = this.db.prepare(\"SELECT value FROM meta WHERE key = 'schema_version'\").get();\n\t\tconst currentVersion = versionRow ? Number.parseInt(versionRow.value, 10) : 0;\n\n\t\tif (currentVersion >= SCHEMA_VERSION) return;\n\n\t\t// Files table\n\t\tthis.db.exec(`\n\t\t\tCREATE TABLE IF NOT EXISTS files (\n\t\t\t\tid INTEGER PRIMARY KEY AUTOINCREMENT,\n\t\t\t\tfile_path TEXT NOT NULL UNIQUE,\n\t\t\t\tmtime REAL NOT NULL,\n\t\t\t\tfile_type TEXT NOT NULL\n\t\t\t)\n\t\t`);\n\n\t\t// Chunks table\n\t\tthis.db.exec(`\n\t\t\tCREATE TABLE IF NOT EXISTS chunks (\n\t\t\t\tid INTEGER PRIMARY KEY AUTOINCREMENT,\n\t\t\t\tfile_id INTEGER NOT NULL REFERENCES files(id) ON DELETE CASCADE,\n\t\t\t\tfile_path TEXT NOT NULL,\n\t\t\t\tstart_line INTEGER NOT NULL,\n\t\t\t\tend_line INTEGER NOT NULL,\n\t\t\t\tkind TEXT NOT NULL,\n\t\t\t\tname TEXT,\n\t\t\t\tcontent TEXT NOT NULL,\n\t\t\t\tfile_type TEXT NOT NULL\n\t\t\t)\n\t\t`);\n\t\tthis.db.exec(\"CREATE INDEX IF NOT EXISTS idx_chunks_file_id ON chunks(file_id)\");\n\t\tthis.db.exec(\"CREATE INDEX IF NOT EXISTS idx_chunks_file_path ON chunks(file_path)\");\n\n\t\t// FTS5 virtual table (content-synced with chunks)\n\t\tthis.db.exec(`\n\t\t\tCREATE VIRTUAL TABLE IF NOT EXISTS chunks_fts USING fts5(\n\t\t\t\tcontent,\n\t\t\t\tname,\n\t\t\t\tfile_path,\n\t\t\t\tcontent='chunks',\n\t\t\t\tcontent_rowid='id',\n\t\t\t\ttokenize='porter unicode61'\n\t\t\t)\n\t\t`);\n\n\t\t// FTS triggers for incremental updates\n\t\tthis.db.exec(`\n\t\t\tCREATE TRIGGER IF NOT EXISTS chunks_ai AFTER INSERT ON chunks BEGIN\n\t\t\t\tINSERT INTO chunks_fts(rowid, content, name, file_path)\n\t\t\t\tVALUES (new.id, new.content, new.name, new.file_path);\n\t\t\tEND\n\t\t`);\n\t\tthis.db.exec(`\n\t\t\tCREATE TRIGGER IF NOT EXISTS chunks_ad AFTER DELETE ON chunks BEGIN\n\t\t\t\tINSERT INTO chunks_fts(chunks_fts, rowid, content, name, file_path)\n\t\t\t\tVALUES ('delete', old.id, old.content, old.name, old.file_path);\n\t\t\tEND\n\t\t`);\n\t\tthis.db.exec(`\n\t\t\tCREATE TRIGGER IF NOT EXISTS chunks_au AFTER UPDATE ON chunks BEGIN\n\t\t\t\tINSERT INTO chunks_fts(chunks_fts, rowid, content, name, file_path)\n\t\t\t\tVALUES ('delete', old.id, old.content, old.name, old.file_path);\n\t\t\t\tINSERT INTO chunks_fts(rowid, content, name, file_path)\n\t\t\t\tVALUES (new.id, new.content, new.name, new.file_path);\n\t\t\tEND\n\t\t`);\n\n\t\t// Embeddings table (keyed by model name for multi-model support)\n\t\tthis.db.exec(`\n\t\t\tCREATE TABLE IF NOT EXISTS embeddings (\n\t\t\t\tchunk_id INTEGER NOT NULL REFERENCES chunks(id) ON DELETE CASCADE,\n\t\t\t\tmodel_name TEXT NOT NULL,\n\t\t\t\tvector BLOB NOT NULL,\n\t\t\t\tPRIMARY KEY (chunk_id, model_name)\n\t\t\t)\n\t\t`);\n\n\t\t// Imports table (import graph edges between files)\n\t\tthis.db.exec(`\n\t\t\tCREATE TABLE IF NOT EXISTS imports (\n\t\t\t\tsource_file_id INTEGER NOT NULL REFERENCES files(id) ON DELETE CASCADE,\n\t\t\t\ttarget_file_path TEXT NOT NULL,\n\t\t\t\tPRIMARY KEY (source_file_id, target_file_path)\n\t\t\t)\n\t\t`);\n\t\tthis.db.exec(\"CREATE INDEX IF NOT EXISTS idx_imports_target ON imports(target_file_path)\");\n\n\t\t// Symbols table (symbol names extracted from chunks)\n\t\tthis.db.exec(`\n\t\t\tCREATE TABLE IF NOT EXISTS symbols (\n\t\t\t\tchunk_id INTEGER NOT NULL REFERENCES chunks(id) ON DELETE CASCADE,\n\t\t\t\tname TEXT NOT NULL,\n\t\t\t\tkind TEXT NOT NULL\n\t\t\t)\n\t\t`);\n\t\tthis.db.exec(\"CREATE INDEX IF NOT EXISTS idx_symbols_name ON symbols(name)\");\n\n\t\t// Set schema version\n\t\tthis.db\n\t\t\t.prepare(\"INSERT OR REPLACE INTO meta (key, value) VALUES ('schema_version', ?)\")\n\t\t\t.run(String(SCHEMA_VERSION));\n\t}\n\n\t// ========================================================================\n\t// Files\n\t// ========================================================================\n\n\t/** Insert or update a file record. Returns the file ID. */\n\tupsertFile(filePath: string, mtime: number, fileType: FileType): number {\n\t\tconst existing = this.db.prepare(\"SELECT id FROM files WHERE file_path = ?\").get(filePath);\n\t\tif (existing) {\n\t\t\tthis.db.prepare(\"UPDATE files SET mtime = ?, file_type = ? WHERE id = ?\").run(mtime, fileType, existing.id);\n\t\t\treturn existing.id;\n\t\t}\n\t\tconst result = this.db\n\t\t\t.prepare(\"INSERT INTO files (file_path, mtime, file_type) VALUES (?, ?, ?)\")\n\t\t\t.run(filePath, mtime, fileType);\n\t\treturn Number(result.lastInsertRowid);\n\t}\n\n\t/** Get a file by path. */\n\tgetFile(filePath: string): IndexedFile | null {\n\t\tconst row = this.db\n\t\t\t.prepare(\"SELECT id, file_path, mtime, file_type FROM files WHERE file_path = ?\")\n\t\t\t.get(filePath);\n\t\tif (!row) return null;\n\t\treturn { id: row.id, filePath: row.file_path, mtime: row.mtime, fileType: row.file_type as FileType };\n\t}\n\n\t/** Get all indexed files. */\n\tgetAllFiles(): IndexedFile[] {\n\t\tconst rows = this.db.prepare(\"SELECT id, file_path, mtime, file_type FROM files\").all();\n\t\treturn rows.map((r: any) => ({\n\t\t\tid: r.id,\n\t\t\tfilePath: r.file_path,\n\t\t\tmtime: r.mtime,\n\t\t\tfileType: r.file_type as FileType,\n\t\t}));\n\t}\n\n\t/** Delete a file and all its chunks/embeddings/symbols (cascading). */\n\tdeleteFile(fileId: number): void {\n\t\tthis.db.prepare(\"DELETE FROM files WHERE id = ?\").run(fileId);\n\t}\n\n\t// ========================================================================\n\t// Chunks\n\t// ========================================================================\n\n\t/** Insert a chunk. Returns the chunk ID. */\n\tinsertChunk(\n\t\tfileId: number,\n\t\tfilePath: string,\n\t\tstartLine: number,\n\t\tendLine: number,\n\t\tkind: ChunkKind,\n\t\tname: string | null,\n\t\tcontent: string,\n\t\tfileType: FileType,\n\t): number {\n\t\tconst result = this.db\n\t\t\t.prepare(\n\t\t\t\t\"INSERT INTO chunks (file_id, file_path, start_line, end_line, kind, name, content, file_type) VALUES (?, ?, ?, ?, ?, ?, ?, ?)\",\n\t\t\t)\n\t\t\t.run(fileId, filePath, startLine, endLine, kind, name, content, fileType);\n\t\treturn Number(result.lastInsertRowid);\n\t}\n\n\t/** Delete all chunks for a file. */\n\tdeleteChunksForFile(fileId: number): void {\n\t\tthis.db.prepare(\"DELETE FROM chunks WHERE file_id = ?\").run(fileId);\n\t}\n\n\t/** Get all chunks. */\n\tgetAllChunks(): StoredChunk[] {\n\t\tconst rows = this.db\n\t\t\t.prepare(\"SELECT id, file_id, file_path, start_line, end_line, kind, name, content, file_type FROM chunks\")\n\t\t\t.all();\n\t\treturn rows.map((r: any) => this.rowToChunk(r));\n\t}\n\n\t/** Get chunks by file ID. */\n\tgetChunksByFileId(fileId: number): StoredChunk[] {\n\t\tconst rows = this.db\n\t\t\t.prepare(\n\t\t\t\t\"SELECT id, file_id, file_path, start_line, end_line, kind, name, content, file_type FROM chunks WHERE file_id = ?\",\n\t\t\t)\n\t\t\t.all(fileId);\n\t\treturn rows.map((r: any) => this.rowToChunk(r));\n\t}\n\n\t/** Get a chunk by ID. */\n\tgetChunk(chunkId: number): StoredChunk | null {\n\t\tconst row = this.db\n\t\t\t.prepare(\n\t\t\t\t\"SELECT id, file_id, file_path, start_line, end_line, kind, name, content, file_type FROM chunks WHERE id = ?\",\n\t\t\t)\n\t\t\t.get(chunkId);\n\t\tif (!row) return null;\n\t\treturn this.rowToChunk(row);\n\t}\n\n\t/** Get multiple chunks by IDs. Batches queries to avoid exceeding SQLite's bind variable limit. */\n\tgetChunksById(chunkIds: number[]): StoredChunk[] {\n\t\tif (chunkIds.length === 0) return [];\n\n\t\tconst BATCH_SIZE = 500;\n\t\tconst results: StoredChunk[] = [];\n\n\t\tfor (let i = 0; i < chunkIds.length; i += BATCH_SIZE) {\n\t\t\tconst batch = chunkIds.slice(i, i + BATCH_SIZE);\n\t\t\tconst placeholders = batch.map(() => \"?\").join(\",\");\n\t\t\tconst rows = this.db\n\t\t\t\t.prepare(\n\t\t\t\t\t`SELECT id, file_id, file_path, start_line, end_line, kind, name, content, file_type FROM chunks WHERE id IN (${placeholders})`,\n\t\t\t\t)\n\t\t\t\t.all(...batch);\n\t\t\tfor (const r of rows) {\n\t\t\t\tresults.push(this.rowToChunk(r));\n\t\t\t}\n\t\t}\n\n\t\treturn results;\n\t}\n\n\tprivate rowToChunk(r: any): StoredChunk {\n\t\treturn {\n\t\t\tid: r.id,\n\t\t\tfileId: r.file_id,\n\t\t\tfilePath: r.file_path,\n\t\t\tstartLine: r.start_line,\n\t\t\tendLine: r.end_line,\n\t\t\tkind: r.kind as ChunkKind,\n\t\t\tname: r.name,\n\t\t\tcontent: r.content,\n\t\t\tfileType: r.file_type as FileType,\n\t\t};\n\t}\n\n\t// ========================================================================\n\t// Embeddings\n\t// ========================================================================\n\n\t/** Store an embedding vector for a chunk. */\n\tupsertEmbedding(chunkId: number, modelName: string, vector: Float32Array): void {\n\t\tconst blob = Buffer.from(vector.buffer, vector.byteOffset, vector.byteLength);\n\t\tthis.db\n\t\t\t.prepare(\"INSERT OR REPLACE INTO embeddings (chunk_id, model_name, vector) VALUES (?, ?, ?)\")\n\t\t\t.run(chunkId, modelName, blob);\n\t}\n\n\t/** Batch insert embeddings. Uses a transaction for performance. */\n\tbatchUpsertEmbeddings(items: Array<{ chunkId: number; modelName: string; vector: Float32Array }>): void {\n\t\tconst stmt = this.db.prepare(\"INSERT OR REPLACE INTO embeddings (chunk_id, model_name, vector) VALUES (?, ?, ?)\");\n\t\tthis.transaction(() => {\n\t\t\tfor (const item of items) {\n\t\t\t\tconst blob = Buffer.from(item.vector.buffer, item.vector.byteOffset, item.vector.byteLength);\n\t\t\t\tstmt.run(item.chunkId, item.modelName, blob);\n\t\t\t}\n\t\t});\n\t}\n\n\t/** Get the embedding for a chunk. */\n\tgetEmbedding(chunkId: number, modelName: string): Float32Array | null {\n\t\tconst row = this.db\n\t\t\t.prepare(\"SELECT vector FROM embeddings WHERE chunk_id = ? AND model_name = ?\")\n\t\t\t.get(chunkId, modelName);\n\t\tif (!row) return null;\n\t\treturn unpackVector(row.vector);\n\t}\n\n\t/** Get all embeddings for a model. Returns map of chunkId → vector. */\n\tgetAllEmbeddings(modelName: string): Map<number, Float32Array> {\n\t\tconst rows = this.db.prepare(\"SELECT chunk_id, vector FROM embeddings WHERE model_name = ?\").all(modelName);\n\t\tconst map = new Map<number, Float32Array>();\n\t\tfor (const row of rows) {\n\t\t\tmap.set(row.chunk_id, unpackVector(row.vector));\n\t\t}\n\t\treturn map;\n\t}\n\n\t/** Get chunk IDs that have no embedding for a given model. */\n\tgetChunkIdsWithoutEmbedding(modelName: string): number[] {\n\t\tconst rows = this.db\n\t\t\t.prepare(\n\t\t\t\t`SELECT c.id FROM chunks c\n\t\t\t\t LEFT JOIN embeddings e ON c.id = e.chunk_id AND e.model_name = ?\n\t\t\t\t WHERE e.chunk_id IS NULL`,\n\t\t\t)\n\t\t\t.all(modelName);\n\t\treturn rows.map((r: any) => r.id);\n\t}\n\n\t// ========================================================================\n\t// FTS5\n\t// ========================================================================\n\n\t/** Rebuild the FTS5 index (use after bulk operations). */\n\trebuildFts(): void {\n\t\tthis.db.exec(\"INSERT INTO chunks_fts(chunks_fts) VALUES ('rebuild')\");\n\t}\n\n\t/**\n\t * Search via FTS5 with BM25 ranking.\n\t * Returns chunk IDs with their BM25 scores (negated so higher = better).\n\t */\n\tftsSearch(query: string, limit: number): Array<{ chunkId: number; score: number }> {\n\t\ttry {\n\t\t\tconst rows = this.db\n\t\t\t\t.prepare(\n\t\t\t\t\t`SELECT chunks_fts.rowid as chunk_id, -bm25(chunks_fts, 1.0, 10.0, 5.0) as score\n\t\t\t\t\t FROM chunks_fts\n\t\t\t\t\t WHERE chunks_fts MATCH ?\n\t\t\t\t\t ORDER BY score DESC\n\t\t\t\t\t LIMIT ?`,\n\t\t\t\t)\n\t\t\t\t.all(query, limit);\n\t\t\treturn rows.map((r: any) => ({ chunkId: r.chunk_id, score: r.score }));\n\t\t} catch {\n\t\t\t// FTS5 MATCH can fail on malformed queries\n\t\t\treturn [];\n\t\t}\n\t}\n\n\t// ========================================================================\n\t// Imports\n\t// ========================================================================\n\n\t/** Record an import edge. */\n\tinsertImport(sourceFileId: number, targetFilePath: string): void {\n\t\tthis.db\n\t\t\t.prepare(\"INSERT OR IGNORE INTO imports (source_file_id, target_file_path) VALUES (?, ?)\")\n\t\t\t.run(sourceFileId, targetFilePath);\n\t}\n\n\t/** Delete all imports for a source file. */\n\tdeleteImportsForFile(sourceFileId: number): void {\n\t\tthis.db.prepare(\"DELETE FROM imports WHERE source_file_id = ?\").run(sourceFileId);\n\t}\n\n\t/** Get files imported by a given source file. */\n\tgetImportsFrom(sourceFileId: number): string[] {\n\t\tconst rows = this.db.prepare(\"SELECT target_file_path FROM imports WHERE source_file_id = ?\").all(sourceFileId);\n\t\treturn rows.map((r: any) => r.target_file_path);\n\t}\n\n\t/** Get file IDs that import a given target path. */\n\tgetImportersOf(targetFilePath: string): number[] {\n\t\tconst rows = this.db.prepare(\"SELECT source_file_id FROM imports WHERE target_file_path = ?\").all(targetFilePath);\n\t\treturn rows.map((r: any) => r.source_file_id);\n\t}\n\n\t/** Get all import edges. */\n\tgetAllImports(): Array<{ sourceFileId: number; targetFilePath: string }> {\n\t\tconst rows = this.db.prepare(\"SELECT source_file_id, target_file_path FROM imports\").all();\n\t\treturn rows.map((r: any) => ({ sourceFileId: r.source_file_id, targetFilePath: r.target_file_path }));\n\t}\n\n\t// ========================================================================\n\t// Symbols\n\t// ========================================================================\n\n\t/** Insert a symbol. */\n\tinsertSymbol(chunkId: number, name: string, kind: string): void {\n\t\tthis.db.prepare(\"INSERT INTO symbols (chunk_id, name, kind) VALUES (?, ?, ?)\").run(chunkId, name, kind);\n\t}\n\n\t/** Delete symbols for a chunk. */\n\tdeleteSymbolsForChunk(chunkId: number): void {\n\t\tthis.db.prepare(\"DELETE FROM symbols WHERE chunk_id = ?\").run(chunkId);\n\t}\n\n\t/** Get all symbols. Returns map of chunkId → symbol names. */\n\tgetAllSymbols(): Map<number, string[]> {\n\t\tconst rows = this.db.prepare(\"SELECT chunk_id, name FROM symbols\").all();\n\t\tconst map = new Map<number, string[]>();\n\t\tfor (const row of rows) {\n\t\t\tconst existing = map.get(row.chunk_id);\n\t\t\tif (existing) existing.push(row.name);\n\t\t\telse map.set(row.chunk_id, [row.name]);\n\t\t}\n\t\treturn map;\n\t}\n\n\t// ========================================================================\n\t// Transaction Helpers\n\t// ========================================================================\n\n\t/** Run a function inside a transaction. */\n\ttransaction<T>(fn: () => T): T {\n\t\tthis.db.exec(\"BEGIN\");\n\t\ttry {\n\t\t\tconst result = fn();\n\t\t\tthis.db.exec(\"COMMIT\");\n\t\t\treturn result;\n\t\t} catch (err) {\n\t\t\tthis.db.exec(\"ROLLBACK\");\n\t\t\tthrow err;\n\t\t}\n\t}\n\n\t/** Get the total number of chunks. */\n\tgetChunkCount(): number {\n\t\tconst row = this.db.prepare(\"SELECT COUNT(*) as count FROM chunks\").get();\n\t\treturn row.count;\n\t}\n\n\t/** Get the total number of files. */\n\tgetFileCount(): number {\n\t\tconst row = this.db.prepare(\"SELECT COUNT(*) as count FROM files\").get();\n\t\treturn row.count;\n\t}\n\n\t/** Close the database connection. */\n\tclose(): void {\n\t\tthis.db.close();\n\t}\n}\n"]}

package/dist/core/search/embedder.d.ts

@@ -1,51 +0,0 @@
-/**
- * Embedding pipeline using @huggingface/transformers.
- *
- * Generates normalized embeddings for semantic search. The embedding
- * dimension is derived at runtime from the model's actual output.
- * First use downloads the model (~23MB) to the configured cache directory.
- */
-import type { IndexProgressCallback } from "./types.js";
-export interface EmbedderOptions {
-    /** Absolute path to the model cache directory (e.g. ~/.dreb/agent/models/). */
-    modelCacheDir: string;
-    /** HuggingFace model name. Default: 'Xenova/all-MiniLM-L6-v2'. */
-    modelName?: string;
-    /** Number of texts to embed per batch. Default: 32. */
-    batchSize?: number;
-}
-export declare class Embedder {
-    private readonly modelCacheDir;
-    private readonly modelName;
-    private readonly batchSize;
-    private extractor;
-    private resolvedDimension;
-    constructor(options: EmbedderOptions);
-    /**
-     * Initialize the model pipeline. Must be called before embedding.
-     *
-     * On first use this downloads the ONNX model to `modelCacheDir`.
-     * Subsequent calls reuse the cached model.
-     */
-    initialize(): Promise<void>;
-    /**
-     * Embed documents for indexing.
-     *
-     * Applies model-specific prefixes if required, then processes texts
-     * in batches of `batchSize` for memory efficiency.
-     */
-    embedDocuments(texts: string[], onProgress?: IndexProgressCallback): Promise<Float32Array[]>;
-    /**
-     * Embed a query for search.
-     *
-     * Applies model-specific query prefix if required.
-     */
-    embedQuery(query: string): Promise<Float32Array>;
-    /** Get the embedding dimension. Returns the model's actual dimension once known, or 384 as default. */
-    get dimension(): number;
-    /** Dispose the pipeline to free memory. */
-    dispose(): void;
-    /** Throw if initialize() hasn't been called yet. */
-    private ensureInitialized;
-}
-//# sourceMappingURL=embedder.d.ts.map

package/dist/core/search/embedder.d.ts.map

@@ -1 +0,0 @@
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The embedding\n * dimension is derived at runtime from the model's actual output.\n * First use downloads the model (~23MB) to the configured cache directory.\n */\n\nimport type { IndexProgressCallback } from \"./types.js\";\n\n// ============================================================================\n// Types\n// ============================================================================\n\nexport interface EmbedderOptions {\n\t/** Absolute path to the model cache directory (e.g. ~/.dreb/agent/models/). */\n\tmodelCacheDir: string;\n\t/** HuggingFace model name. Default: 'Xenova/all-MiniLM-L6-v2'. */\n\tmodelName?: string;\n\t/** Number of texts to embed per batch. Default: 32. */\n\tbatchSize?: number;\n}\n\n// ============================================================================\n// Constants\n// ============================================================================\n\nconst DEFAULT_MODEL_NAME = \"Xenova/all-MiniLM-L6-v2\";\nconst DEFAULT_BATCH_SIZE = 32;\nconst DEFAULT_DIMENSION = 384;\n\n/**\n * Model-specific prefixes for document vs query embeddings.\n * nomic-embed-text-v1.5 requires these; most other models don't.\n */\nconst MODEL_PREFIXES: Record<string, { document: string; query: string }> = {\n\t\"nomic-ai/nomic-embed-text-v1.5\": { document: \"search_document: \", query: \"search_query: \" },\n};\n\n// ============================================================================\n// Embedder\n// ============================================================================\n\nexport class Embedder {\n\tprivate readonly modelCacheDir: string;\n\tprivate readonly modelName: string;\n\tprivate readonly batchSize: number;\n\tprivate extractor: any | null = null;\n\tprivate resolvedDimension: number | null = null;\n\n\tconstructor(options: EmbedderOptions) {\n\t\tthis.modelCacheDir = options.modelCacheDir;\n\t\tthis.modelName = options.modelName ?? DEFAULT_MODEL_NAME;\n\t\tthis.batchSize = options.batchSize ?? DEFAULT_BATCH_SIZE;\n\t}\n\n\t/**\n\t * Initialize the model pipeline. Must be called before embedding.\n\t *\n\t * On first use this downloads the ONNX model to `modelCacheDir`.\n\t * Subsequent calls reuse the cached model.\n\t */\n\tasync initialize(): Promise<void> {\n\t\tif (this.extractor) return;\n\n\t\t// Dynamic import — @huggingface/transformers is a heavy dependency\n\t\tconst { pipeline, env } = await import(\"@huggingface/transformers\");\n\n\t\t// Direct the model cache to our managed directory\n\t\tenv.cacheDir = this.modelCacheDir;\n\n\t\t// Suppress the onnxruntime native addon warning — WASM fallback is fine\n\t\t// The library tries to load native onnxruntime first and logs a warning\n\t\t// when it falls back to WASM. We suppress this to avoid confusing users.\n\t\tconst originalWarn = console.warn;\n\t\tconsole.warn = (...args: any[]) => {\n\t\t\tconst msg = typeof args[0] === \"string\" ? args[0] : \"\";\n\t\t\tif (msg.includes(\"onnxruntime\") || msg.includes(\"ONNX\")) return;\n\t\t\toriginalWarn.apply(console, args);\n\t\t};\n\n\t\ttry {\n\t\t\tthis.extractor = await pipeline(\"feature-extraction\", this.modelName, {\n\t\t\t\tdtype: \"q8\" as any,\n\t\t\t\tdevice: \"cpu\" as any,\n\t\t\t});\n\t\t} finally {\n\t\t\tconsole.warn = originalWarn;\n\t\t}\n\t}\n\n\t/**\n\t * Embed documents for indexing.\n\t *\n\t * Applies model-specific prefixes if required, then processes texts\n\t * in batches of `batchSize` for memory efficiency.\n\t */\n\tasync embedDocuments(texts: string[], onProgress?: IndexProgressCallback): Promise<Float32Array[]> {\n\t\tthis.ensureInitialized();\n\n\t\tconst results: Float32Array[] = [];\n\t\tconst total = texts.length;\n\t\tconst prefix = MODEL_PREFIXES[this.modelName]?.document ?? \"\";\n\n\t\tfor (let i = 0; i < total; i += this.batchSize) {\n\t\t\tconst batch = texts.slice(i, i + this.batchSize);\n\t\t\tconst prefixed = prefix ? batch.map((t) => prefix + t) : batch;\n\n\t\t\tconst output = await this.extractor!(prefixed, {\n\t\t\t\tpooling: \"mean\",\n\t\t\t\tnormalize: true,\n\t\t\t});\n\n\t\t\t// output.data is a flat Float32Array of shape [batchLen, dim]\n\t\t\tconst data: Float32Array = output.data;\n\t\t\tconst dim = data.length / batch.length;\n\t\t\tif (this.resolvedDimension === null) {\n\t\t\t\tthis.resolvedDimension = dim;\n\t\t\t}\n\t\t\tfor (let j = 0; j < batch.length; j++) {\n\t\t\t\tconst start = j * dim;\n\t\t\t\tresults.push(data.slice(start, start + dim));\n\t\t\t}\n\n\t\t\tif (onProgress) {\n\t\t\t\tonProgress(\"embedding\", Math.min(i + batch.length, total), total);\n\t\t\t}\n\t\t}\n\n\t\treturn results;\n\t}\n\n\t/**\n\t * Embed a query for search.\n\t *\n\t * Applies model-specific query prefix if required.\n\t */\n\tasync embedQuery(query: string): Promise<Float32Array> {\n\t\tthis.ensureInitialized();\n\n\t\tconst prefix = MODEL_PREFIXES[this.modelName]?.query ?? \"\";\n\t\tconst output = await this.extractor!(prefix + query, {\n\t\t\tpooling: \"mean\",\n\t\t\tnormalize: true,\n\t\t});\n\n\t\t// Single input — derive dimension and slice to exactly one vector\n\t\tconst data: Float32Array = output.data;\n\t\tconst dim = data.length;\n\t\tif (this.resolvedDimension === null) {\n\t\t\tthis.resolvedDimension = dim;\n\t\t}\n\t\treturn data.slice(0, dim);\n\t}\n\n\t/** Get the embedding dimension. Returns the model's actual dimension once known, or 384 as default. */\n\tget dimension(): number {\n\t\treturn this.resolvedDimension ?? DEFAULT_DIMENSION;\n\t}\n\n\t/** Dispose the pipeline to free memory. */\n\tdispose(): void {\n\t\tif (this.extractor) {\n\t\t\t// The pipeline object may have a dispose method depending on the version\n\t\t\tif (typeof this.extractor.dispose === \"function\") {\n\t\t\t\tthis.extractor.dispose();\n\t\t\t}\n\t\t\tthis.extractor = null;\n\t\t}\n\t}\n\n\t/** Throw if initialize() hasn't been called yet. */\n\tprivate ensureInitialized(): void {\n\t\tif (!this.extractor) {\n\t\t\tthrow new Error(\"Embedder not initialized. Call initialize() first.\");\n\t\t}\n\t}\n}\n"]}

package/dist/core/search/embedder.js

@@ -1,143 +0,0 @@
-/**
- * Embedding pipeline using @huggingface/transformers.
- *
- * Generates normalized embeddings for semantic search. The embedding
- * dimension is derived at runtime from the model's actual output.
- * First use downloads the model (~23MB) to the configured cache directory.
- */
-// ============================================================================
-// Constants
-// ============================================================================
-const DEFAULT_MODEL_NAME = "Xenova/all-MiniLM-L6-v2";
-const DEFAULT_BATCH_SIZE = 32;
-const DEFAULT_DIMENSION = 384;
-/**
- * Model-specific prefixes for document vs query embeddings.
- * nomic-embed-text-v1.5 requires these; most other models don't.
- */
-const MODEL_PREFIXES = {
-    "nomic-ai/nomic-embed-text-v1.5": { document: "search_document: ", query: "search_query: " },
-};
-// ============================================================================
-// Embedder
-// ============================================================================
-export class Embedder {
-    modelCacheDir;
-    modelName;
-    batchSize;
-    extractor = null;
-    resolvedDimension = null;
-    constructor(options) {
-        this.modelCacheDir = options.modelCacheDir;
-        this.modelName = options.modelName ?? DEFAULT_MODEL_NAME;
-        this.batchSize = options.batchSize ?? DEFAULT_BATCH_SIZE;
-    }
-    /**
-     * Initialize the model pipeline. Must be called before embedding.
-     *
-     * On first use this downloads the ONNX model to `modelCacheDir`.
-     * Subsequent calls reuse the cached model.
-     */
-    async initialize() {
-        if (this.extractor)
-            return;
-        // Dynamic import — @huggingface/transformers is a heavy dependency
-        const { pipeline, env } = await import("@huggingface/transformers");
-        // Direct the model cache to our managed directory
-        env.cacheDir = this.modelCacheDir;
-        // Suppress the onnxruntime native addon warning — WASM fallback is fine
-        // The library tries to load native onnxruntime first and logs a warning
-        // when it falls back to WASM. We suppress this to avoid confusing users.
-        const originalWarn = console.warn;
-        console.warn = (...args) => {
-            const msg = typeof args[0] === "string" ? args[0] : "";
-            if (msg.includes("onnxruntime") || msg.includes("ONNX"))
-                return;
-            originalWarn.apply(console, args);
-        };
-        try {
-            this.extractor = await pipeline("feature-extraction", this.modelName, {
-                dtype: "q8",
-                device: "cpu",
-            });
-        }
-        finally {
-            console.warn = originalWarn;
-        }
-    }
-    /**
-     * Embed documents for indexing.
-     *
-     * Applies model-specific prefixes if required, then processes texts
-     * in batches of `batchSize` for memory efficiency.
-     */
-    async embedDocuments(texts, onProgress) {
-        this.ensureInitialized();
-        const results = [];
-        const total = texts.length;
-        const prefix = MODEL_PREFIXES[this.modelName]?.document ?? "";
-        for (let i = 0; i < total; i += this.batchSize) {
-            const batch = texts.slice(i, i + this.batchSize);
-            const prefixed = prefix ? batch.map((t) => prefix + t) : batch;
-            const output = await this.extractor(prefixed, {
-                pooling: "mean",
-                normalize: true,
-            });
-            // output.data is a flat Float32Array of shape [batchLen, dim]
-            const data = output.data;
-            const dim = data.length / batch.length;
-            if (this.resolvedDimension === null) {
-                this.resolvedDimension = dim;
-            }
-            for (let j = 0; j < batch.length; j++) {
-                const start = j * dim;
-                results.push(data.slice(start, start + dim));
-            }
-            if (onProgress) {
-                onProgress("embedding", Math.min(i + batch.length, total), total);
-            }
-        }
-        return results;
-    }
-    /**
-     * Embed a query for search.
-     *
-     * Applies model-specific query prefix if required.
-     */
-    async embedQuery(query) {
-        this.ensureInitialized();
-        const prefix = MODEL_PREFIXES[this.modelName]?.query ?? "";
-        const output = await this.extractor(prefix + query, {
-            pooling: "mean",
-            normalize: true,
-        });
-        // Single input — derive dimension and slice to exactly one vector
-        const data = output.data;
-        const dim = data.length;
-        if (this.resolvedDimension === null) {
-            this.resolvedDimension = dim;
-        }
-        return data.slice(0, dim);
-    }
-    /** Get the embedding dimension. Returns the model's actual dimension once known, or 384 as default. */
-    get dimension() {
-        return this.resolvedDimension ?? DEFAULT_DIMENSION;
-    }
-    /** Dispose the pipeline to free memory. */
-    dispose() {
-        if (this.extractor) {
-            // The pipeline object may have a dispose method depending on the version
-            if (typeof this.extractor.dispose === "function") {
-                this.extractor.dispose();
-            }
-            this.extractor = null;
-        }
-    }
-    /** Throw if initialize() hasn't been called yet. */
-    ensureInitialized() {
-        if (!this.extractor) {
-            throw new Error("Embedder not initialized. Call initialize() first.");
-        }
-    }
-}
-//# sourceMappingURL=embedder.js.map

package/dist/core/search/embedder.js.map

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The embedding\n * dimension is derived at runtime from the model's actual output.\n * First use downloads the model (~23MB) to the configured cache directory.\n */\n\nimport type { IndexProgressCallback } from \"./types.js\";\n\n// ============================================================================\n// Types\n// ============================================================================\n\nexport interface EmbedderOptions {\n\t/** Absolute path to the model cache directory (e.g. ~/.dreb/agent/models/). */\n\tmodelCacheDir: string;\n\t/** HuggingFace model name. Default: 'Xenova/all-MiniLM-L6-v2'. */\n\tmodelName?: string;\n\t/** Number of texts to embed per batch. Default: 32. */\n\tbatchSize?: number;\n}\n\n// ============================================================================\n// Constants\n// ============================================================================\n\nconst DEFAULT_MODEL_NAME = \"Xenova/all-MiniLM-L6-v2\";\nconst DEFAULT_BATCH_SIZE = 32;\nconst DEFAULT_DIMENSION = 384;\n\n/**\n * Model-specific prefixes for document vs query embeddings.\n * nomic-embed-text-v1.5 requires these; most other models don't.\n */\nconst MODEL_PREFIXES: Record<string, { document: string; query: string }> = {\n\t\"nomic-ai/nomic-embed-text-v1.5\": { document: \"search_document: \", query: \"search_query: \" },\n};\n\n// ============================================================================\n// Embedder\n// ============================================================================\n\nexport class Embedder {\n\tprivate readonly modelCacheDir: string;\n\tprivate readonly modelName: string;\n\tprivate readonly batchSize: number;\n\tprivate extractor: any | null = null;\n\tprivate resolvedDimension: number | null = null;\n\n\tconstructor(options: EmbedderOptions) {\n\t\tthis.modelCacheDir = options.modelCacheDir;\n\t\tthis.modelName = options.modelName ?? DEFAULT_MODEL_NAME;\n\t\tthis.batchSize = options.batchSize ?? DEFAULT_BATCH_SIZE;\n\t}\n\n\t/**\n\t * Initialize the model pipeline. Must be called before embedding.\n\t *\n\t * On first use this downloads the ONNX model to `modelCacheDir`.\n\t * Subsequent calls reuse the cached model.\n\t */\n\tasync initialize(): Promise<void> {\n\t\tif (this.extractor) return;\n\n\t\t// Dynamic import — @huggingface/transformers is a heavy dependency\n\t\tconst { pipeline, env } = await import(\"@huggingface/transformers\");\n\n\t\t// Direct the model cache to our managed directory\n\t\tenv.cacheDir = this.modelCacheDir;\n\n\t\t// Suppress the onnxruntime native addon warning — WASM fallback is fine\n\t\t// The library tries to load native onnxruntime first and logs a warning\n\t\t// when it falls back to WASM. We suppress this to avoid confusing users.\n\t\tconst originalWarn = console.warn;\n\t\tconsole.warn = (...args: any[]) => {\n\t\t\tconst msg = typeof args[0] === \"string\" ? args[0] : \"\";\n\t\t\tif (msg.includes(\"onnxruntime\") || msg.includes(\"ONNX\")) return;\n\t\t\toriginalWarn.apply(console, args);\n\t\t};\n\n\t\ttry {\n\t\t\tthis.extractor = await pipeline(\"feature-extraction\", this.modelName, {\n\t\t\t\tdtype: \"q8\" as any,\n\t\t\t\tdevice: \"cpu\" as any,\n\t\t\t});\n\t\t} finally {\n\t\t\tconsole.warn = originalWarn;\n\t\t}\n\t}\n\n\t/**\n\t * Embed documents for indexing.\n\t *\n\t * Applies model-specific prefixes if required, then processes texts\n\t * in batches of `batchSize` for memory efficiency.\n\t */\n\tasync embedDocuments(texts: string[], onProgress?: IndexProgressCallback): Promise<Float32Array[]> {\n\t\tthis.ensureInitialized();\n\n\t\tconst results: Float32Array[] = [];\n\t\tconst total = texts.length;\n\t\tconst prefix = MODEL_PREFIXES[this.modelName]?.document ?? \"\";\n\n\t\tfor (let i = 0; i < total; i += this.batchSize) {\n\t\t\tconst batch = texts.slice(i, i + this.batchSize);\n\t\t\tconst prefixed = prefix ? batch.map((t) => prefix + t) : batch;\n\n\t\t\tconst output = await this.extractor!(prefixed, {\n\t\t\t\tpooling: \"mean\",\n\t\t\t\tnormalize: true,\n\t\t\t});\n\n\t\t\t// output.data is a flat Float32Array of shape [batchLen, dim]\n\t\t\tconst data: Float32Array = output.data;\n\t\t\tconst dim = data.length / batch.length;\n\t\t\tif (this.resolvedDimension === null) {\n\t\t\t\tthis.resolvedDimension = dim;\n\t\t\t}\n\t\t\tfor (let j = 0; j < batch.length; j++) {\n\t\t\t\tconst start = j * dim;\n\t\t\t\tresults.push(data.slice(start, start + dim));\n\t\t\t}\n\n\t\t\tif (onProgress) {\n\t\t\t\tonProgress(\"embedding\", Math.min(i + batch.length, total), total);\n\t\t\t}\n\t\t}\n\n\t\treturn results;\n\t}\n\n\t/**\n\t * Embed a query for search.\n\t *\n\t * Applies model-specific query prefix if required.\n\t */\n\tasync embedQuery(query: string): Promise<Float32Array> {\n\t\tthis.ensureInitialized();\n\n\t\tconst prefix = MODEL_PREFIXES[this.modelName]?.query ?? \"\";\n\t\tconst output = await this.extractor!(prefix + query, {\n\t\t\tpooling: \"mean\",\n\t\t\tnormalize: true,\n\t\t});\n\n\t\t// Single input — derive dimension and slice to exactly one vector\n\t\tconst data: Float32Array = output.data;\n\t\tconst dim = data.length;\n\t\tif (this.resolvedDimension === null) {\n\t\t\tthis.resolvedDimension = dim;\n\t\t}\n\t\treturn data.slice(0, dim);\n\t}\n\n\t/** Get the embedding dimension. Returns the model's actual dimension once known, or 384 as default. */\n\tget dimension(): number {\n\t\treturn this.resolvedDimension ?? DEFAULT_DIMENSION;\n\t}\n\n\t/** Dispose the pipeline to free memory. */\n\tdispose(): void {\n\t\tif (this.extractor) {\n\t\t\t// The pipeline object may have a dispose method depending on the version\n\t\t\tif (typeof this.extractor.dispose === \"function\") {\n\t\t\t\tthis.extractor.dispose();\n\t\t\t}\n\t\t\tthis.extractor = null;\n\t\t}\n\t}\n\n\t/** Throw if initialize() hasn't been called yet. */\n\tprivate ensureInitialized(): void {\n\t\tif (!this.extractor) {\n\t\t\tthrow new Error(\"Embedder not initialized. Call initialize() first.\");\n\t\t}\n\t}\n}\n"]}

package/dist/core/search/index-manager.d.ts

@@ -1,55 +0,0 @@
-/**
- * Index lifecycle manager.
- *
- * Orchestrates: file scanning → chunking → embedding → FTS indexing → import graph.
- * Supports incremental updates via mtime comparison.
- */
-import type { SearchDatabase } from "./db.js";
-import type { Embedder } from "./embedder.js";
-import type { IndexConfig, IndexProgressCallback } from "./types.js";
-export declare class IndexManager {
-    private readonly config;
-    private db;
-    private embedder;
-    constructor(config: IndexConfig);
-    /** Check if node:sqlite is available. */
-    static isAvailable(): boolean;
-    /** Open or create the index database. */
-    open(): SearchDatabase;
-    /**
-     * Set an external embedder instance to share with the caller.
-     * When set, embedChunks() uses this instead of creating its own.
-     */
-    setEmbedder(embedder: Embedder): void;
-    /** Close the database and dispose resources. */
-    close(): void;
-    /** Get the database, opening if needed. */
-    getDb(): SearchDatabase;
-    /**
-     * Build or incrementally update the index.
-     *
-     * 1. Scan project for files
-     * 2. Compare mtimes against stored records
-     * 3. Re-chunk and re-embed only changed/new files
-     * 4. Remove deleted files
-     */
-    buildIndex(onProgress?: IndexProgressCallback): Promise<{
-        added: number;
-        updated: number;
-        removed: number;
-        failed: number;
-    }>;
-    /**
-     * Ensure all chunks have embeddings, generating any missing ones.
-     */
-    ensureEmbeddings(onProgress?: IndexProgressCallback): Promise<number>;
-    private embedChunks;
-    /** Check if the index exists. */
-    indexExists(): boolean;
-    /** Get index stats. */
-    getStats(): {
-        files: number;
-        chunks: number;
-    } | null;
-}
-//# sourceMappingURL=index-manager.d.ts.map

package/dist/core/search/index-manager.d.ts.map

@@ -1 +0,0 @@
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Scan project for files\n\t * 2. Compare mtimes against stored records\n\t * 3. Re-chunk and re-embed only changed/new files\n\t * 4. Remove deleted files\n\t */\n\tasync buildIndex(\n\t\tonProgress?: IndexProgressCallback,\n\t): Promise<{ added: number; updated: number; removed: number; failed: number }> {\n\t\tconst db = this.getDb();\n\t\tconst config = this.config;\n\n\t\t// Phase 1: Scan\n\t\tonProgress?.(\"scanning\", 0, 1);\n\t\tconst scannedFiles = await scanProject(config.projectRoot, config.globalMemoryDir);\n\t\tonProgress?.(\"scanning\", 1, 1);\n\n\t\t// Phase 2: Diff against existing index\n\t\tconst existingFiles = db.getAllFiles();\n\t\tconst existingByPath = new Map<string, IndexedFile>();\n\t\tfor (const f of existingFiles) {\n\t\t\texistingByPath.set(f.filePath, f);\n\t\t}\n\n\t\tconst scannedByPath = new Map<string, ScannedFile>();\n\t\tfor (const f of scannedFiles) {\n\t\t\tscannedByPath.set(f.filePath, f);\n\t\t}\n\n\t\tconst toAdd: ScannedFile[] = [];\n\t\tconst toUpdate: ScannedFile[] = [];\n\t\tconst toRemove: IndexedFile[] = [];\n\n\t\t// Find new and changed files\n\t\tfor (const scanned of scannedFiles) {\n\t\t\tconst existing = existingByPath.get(scanned.filePath);\n\t\t\tif (!existing) {\n\t\t\t\ttoAdd.push(scanned);\n\t\t\t} else if (existing.mtime !== scanned.mtime) {\n\t\t\t\ttoUpdate.push(scanned);\n\t\t\t}\n\t\t}\n\n\t\t// Find deleted files\n\t\tfor (const existing of existingFiles) {\n\t\t\tif (!scannedByPath.has(existing.filePath)) {\n\t\t\t\ttoRemove.push(existing);\n\t\t\t}\n\t\t}\n\n\t\tconst totalWork = toAdd.length + toUpdate.length + toRemove.length;\n\t\tif (totalWork === 0) {\n\t\t\treturn { added: 0, updated: 0, removed: 0, failed: 0 };\n\t\t}\n\n\t\t// Phase 3: Remove deleted files\n\t\tfor (const file of toRemove) {\n\t\t\tdb.deleteFile(file.id);\n\t\t}\n\n\t\t// Phase 4: Process new and changed files\n\t\tconst filesToProcess = [...toAdd, ...toUpdate];\n\t\tconst allNewChunkIds: number[] = [];\n\t\tlet failed = 0;\n\n\t\tfor (let i = 0; i < filesToProcess.length; i++) {\n\t\t\tconst scanned = filesToProcess[i];\n\t\t\tonProgress?.(\"indexing\", i + 1, filesToProcess.length);\n\n\t\t\ttry {\n\t\t\t\t// Read file content and chunk BEFORE the transaction so that\n\t\t\t\t// failures in I/O or chunking don't leave a committed mtime\n\t\t\t\t// with zero chunks (which would make the file permanently invisible).\n\t\t\t\tconst absPath = scanned.filePath.startsWith(\"~memory/\")\n\t\t\t\t\t? path.join(this.config.globalMemoryDir ?? \"\", scanned.filePath.replace(\"~memory/\", \"\"))\n\t\t\t\t\t: path.join(config.projectRoot, scanned.filePath);\n\n\t\t\t\tconst content = readFileSync(absPath, \"utf-8\");\n\t\t\t\tconst chunks = await chunkFile(content, scanned.filePath, scanned.fileType);\n\t\t\t\tconst imports = extractImports(content, scanned.filePath, scanned.fileType);\n\n\t\t\t\t// All DB mutations in a single transaction — atomic per file\n\t\t\t\tdb.transaction(() => {\n\t\t\t\t\tconst fileId = db.upsertFile(scanned.filePath, scanned.mtime, scanned.fileType);\n\n\t\t\t\t\t// Delete old chunks (for updates)\n\t\t\t\t\tconst existingFile = existingByPath.get(scanned.filePath);\n\t\t\t\t\tif (existingFile) {\n\t\t\t\t\t\tdb.deleteChunksForFile(existingFile.id);\n\t\t\t\t\t\tdb.deleteImportsForFile(existingFile.id);\n\t\t\t\t\t}\n\n\t\t\t\t\t// Insert chunks and symbols\n\t\t\t\t\tfor (const chunk of chunks) {\n\t\t\t\t\t\tconst chunkId = db.insertChunk(\n\t\t\t\t\t\t\tfileId,\n\t\t\t\t\t\t\tchunk.filePath,\n\t\t\t\t\t\t\tchunk.startLine,\n\t\t\t\t\t\t\tchunk.endLine,\n\t\t\t\t\t\t\tchunk.kind,\n\t\t\t\t\t\t\tchunk.name,\n\t\t\t\t\t\t\tchunk.content,\n\t\t\t\t\t\t\tchunk.fileType,\n\t\t\t\t\t\t);\n\t\t\t\t\t\tallNewChunkIds.push(chunkId);\n\n\t\t\t\t\t\tif (chunk.name) {\n\t\t\t\t\t\t\tdb.insertSymbol(chunkId, chunk.name, chunk.kind);\n\t\t\t\t\t\t}\n\t\t\t\t\t}\n\n\t\t\t\t\t// Store import edges\n\t\t\t\t\tfor (const imp of imports) {\n\t\t\t\t\t\tdb.insertImport(fileId, imp);\n\t\t\t\t\t}\n\t\t\t\t});\n\t\t\t} catch (err: unknown) {\n\t\t\t\t// Re-throw DB-level errors (SQLITE_FULL, disk full, etc.) — these\n\t\t\t\t// indicate infrastructure problems, not per-file issues.\n\t\t\t\tconst message = err instanceof Error ? err.message : String(err);\n\t\t\t\tif (message.includes(\"SQLITE\")) {\n\t\t\t\t\tthrow err;\n\t\t\t\t}\n\t\t\t\t// Skip files that fail to process (permissions, encoding issues, etc.)\n\t\t\t\tfailed++;\n\t\t\t}\n\t\t}\n\n\t\t// Phase 5: Embed new chunks\n\t\tif (allNewChunkIds.length > 0) {\n\t\t\tawait this.embedChunks(db, allNewChunkIds, onProgress);\n\t\t}\n\n\t\treturn { added: toAdd.length, updated: toUpdate.length, removed: toRemove.length, failed };\n\t}\n\n\t/**\n\t * Ensure all chunks have embeddings, generating any missing ones.\n\t */\n\tasync ensureEmbeddings(onProgress?: IndexProgressCallback): Promise<number> {\n\t\tconst db = this.getDb();\n\t\tconst missingIds = db.getChunkIdsWithoutEmbedding(this.config.modelName);\n\t\tif (missingIds.length === 0) return 0;\n\n\t\tawait this.embedChunks(db, missingIds, onProgress);\n\t\treturn missingIds.length;\n\t}\n\n\t/**\n\t * Generate embeddings for specific chunks.\n\t * Requires an embedder to be set via setEmbedder() before calling.\n\t */\n\tprivate async embedChunks(\n\t\tdb: SearchDatabase,\n\t\tchunkIds: number[],\n\t\tonProgress?: IndexProgressCallback,\n\t): Promise<void> {\n\t\tif (chunkIds.length === 0) return;\n\n\t\tif (!this.embedder) {\n\t\t\tthrow new Error(\"IndexManager: embedder not set. Call setEmbedder() before embedding.\");\n\t\t}\n\n\t\t// Get chunk contents\n\t\tconst chunks = db.getChunksById(chunkIds);\n\t\tconst texts = chunks.map((c) => c.content);\n\n\t\t// Generate embeddings\n\t\tconst vectors = await this.embedder.embedDocuments(texts, onProgress);\n\n\t\t// Store embeddings\n\t\tconst items = chunks.map((chunk, i) => ({\n\t\t\tchunkId: chunk.id,\n\t\t\tmodelName: this.config.modelName,\n\t\t\tvector: vectors[i],\n\t\t}));\n\t\tdb.batchUpsertEmbeddings(items);\n\t}\n\n\t/** Check if the index exists. */\n\tindexExists(): boolean {\n\t\tconst dbPath = path.join(this.config.indexDir, DB_FILENAME);\n\t\treturn existsSync(dbPath);\n\t}\n\n\t/** Get index stats. */\n\tgetStats(): { files: number; chunks: number } | null {\n\t\tif (!this.indexExists()) return null;\n\t\tconst db = this.getDb();\n\t\treturn {\n\t\t\tfiles: db.getFileCount(),\n\t\t\tchunks: db.getChunkCount(),\n\t\t};\n\t}\n}\n\n// ============================================================================\n// Import Extraction (simple regex-based)\n// ============================================================================\n\n/**\n * Extract import targets from source code.\n * Returns resolved relative paths (without extensions for JS/TS).\n */\nfunction extractImports(content: string, filePath: string, fileType: string): string[] {\n\tconst imports: string[] = [];\n\tconst dir = path.dirname(filePath);\n\n\tif (fileType === \"typescript\" || fileType === \"tsx\" || fileType === \"javascript\") {\n\t\t// ES6 imports: import ... from '...'\n\t\t// require(): require('...')\n\t\tconst importRe = /(?:import\\s+.*?\\s+from\\s+|import\\s*\\(|require\\s*\\()\\s*['\"]([^'\"]+)['\"]/g;\n\t\tfor (const match of content.matchAll(importRe)) {\n\t\t\tconst target = match[1];\n\t\t\tif (target.startsWith(\".\")) {\n\t\t\t\timports.push(resolveImportPath(dir, target));\n\t\t\t}\n\t\t}\n\t} else if (fileType === \"python\") {\n\t\t// from . import X, from .module import X\n\t\tconst fromRe = /from\\s+(\\.\\S*)\\s+import/g;\n\t\tfor (const match of content.matchAll(fromRe)) {\n\t\t\tconst resolved = resolvePythonImport(dir, match[1]);\n\t\t\tif (resolved) imports.push(resolved);\n\t\t}\n\t} else if (fileType === \"go\") {\n\t\t// import \"...\" or import ( \"...\" )\n\t\tconst importRe = /import\\s+(?:\\(\\s*(?:[\\s\\S]*?)\\s*\\)|\"([^\"]+)\")/g;\n\t\tconst pathRe = /\"([^\"]+)\"/g;\n\t\tfor (const match of content.matchAll(importRe)) {\n\t\t\tif (match[1]) {\n\t\t\t\timports.push(match[1]);\n\t\t\t} else {\n\t\t\t\t// Multi-line import block\n\t\t\t\tfor (const inner of match[0].matchAll(pathRe)) {\n\t\t\t\t\timports.push(inner[1]);\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\t} else if (fileType === \"rust\") {\n\t\t// use crate::..., use super::...,\n\t\tconst useRe = /use\\s+((?:crate|super|self)::[\\w:]+)/g;\n\t\tfor (const match of content.matchAll(useRe)) {\n\t\t\timports.push(match[1].replace(/::/g, \"/\"));\n\t\t}\n\t} else if (fileType === \"java\") {\n\t\t// import com.example.Foo;\n\t\tconst importRe = /import\\s+([\\w.]+)\\s*;/g;\n\t\tfor (const match of content.matchAll(importRe)) {\n\t\t\timports.push(match[1].replace(/\\./g, \"/\"));\n\t\t}\n\t} else if (fileType === \"c\" || fileType === \"cpp\") {\n\t\t// #include \"local.h\"\n\t\tconst includeRe = /#include\\s+\"([^\"]+)\"/g;\n\t\tfor (const match of content.matchAll(includeRe)) {\n\t\t\timports.push(path.posix.join(dir, match[1]));\n\t\t}\n\t}\n\n\treturn imports;\n}\n\n/** Resolve a relative JS/TS import to a file path. */\nfunction resolveImportPath(fromDir: string, importPath: string): string {\n\t// Strip .js/.ts extension if present (normalize)\n\tconst cleaned = importPath.replace(/\\.[jt]sx?$/, \"\");\n\treturn path.posix.join(fromDir, cleaned);\n}\n\n/** Resolve a Python relative import. */\nfunction resolvePythonImport(fromDir: string, importPath: string): string | null {\n\tif (importPath === \".\") return fromDir;\n\tconst dots = importPath.match(/^(\\.+)/);\n\tif (!dots) return null;\n\tconst levels = dots[1].length - 1;\n\tconst remainder = importPath.slice(dots[1].length).replace(/\\./g, \"/\");\n\tlet base = fromDir;\n\tfor (let i = 0; i < levels; i++) {\n\t\tbase = path.posix.dirname(base);\n\t}\n\treturn remainder ? path.posix.join(base, remainder) : base;\n}\n"]}