@dotdrelle/wiki-manager 0.14.12 → 0.14.16

package/wiki-workspace

@@ -95,6 +95,7 @@ Commands:
   agents down                       Stop all external agents
   agents logs [args...]             Follow external agent logs
   agents pull                       Pull latest external agent images
+  agents refresh                    Update only external agents currently running
   agents status                     Check reachability of configured MCP endpoints
 
   runtime up                        Start the single host agent-runtime on Node.js 22
@@ -210,8 +211,11 @@ agents_compose() {
   [[ -f "$agents_compose_file" ]] || die "agents compose file not found: $agents_compose_file"
 
   local agents_data_dir workspaces_root
-  agents_data_dir="$(absolute_path "${AGENTS_DATA_DIR:-.agents-data}" "$DEFAULT_MANAGER_DIR")"
   workspaces_root="$(absolute_path "$WORKSPACES_DIR" "$DEFAULT_MANAGER_DIR")"
+  # Canonical .agents-data lives next to the workspaces (same rule as the
+  # manager's resolveAgentsDataDir): the serve stack and the agents stack MUST
+  # mount the same host directory or document conversions break.
+  agents_data_dir="$(absolute_path "${AGENTS_DATA_DIR:-$workspaces_root/.agents-data}" "$DEFAULT_MANAGER_DIR")"
 
   local compose_env_args=()
   [[ -f "$MANAGER_ENV_FILE" ]] && compose_env_args+=(--env-file "$MANAGER_ENV_FILE")
@@ -273,6 +277,10 @@ agents_compose() {
       [[ $# -eq 0 ]] || die "agents pull does not take arguments"
       _agents_dc pull
       ;;
+    refresh)
+      [[ $# -eq 0 ]] || die "agents refresh does not take arguments"
+      refresh_running_services 'No running external agent containers to refresh' 'Refreshed running agents: %s' _agents_dc
+      ;;
     status)
       [[ $# -eq 0 ]] || die "agents status does not take arguments"
       if [[ ! -f "$MANAGER_ENDPOINTS_FILE" ]]; then
@@ -709,7 +717,8 @@ compose_for_workspace() {
   mcp_port="$(workspace_value "$workspace" WIKI_MCP_PORT 3101)"
   prod_port="$(workspace_value "$workspace" PRODUCTION_MCP_PORT 3102)"
   project="$(compose_project "$workspace")"
-  agents_data_dir="$(absolute_path "${AGENTS_DATA_DIR:-.agents-data}" "$DEFAULT_MANAGER_DIR")"
+  # Same canonical rule as agents_compose: .agents-data next to the workspaces.
+  agents_data_dir="$(absolute_path "${AGENTS_DATA_DIR:-$(dirname "$ws_path")/.agents-data}" "$DEFAULT_MANAGER_DIR")"
 
   local compose_env_args=()
   [[ -f "$MANAGER_ENV_FILE" ]] && compose_env_args+=(--env-file "$MANAGER_ENV_FILE")
@@ -747,10 +756,30 @@ read_lines_into_array() {
   eval "$array_name=()"
   local line
   while IFS= read -r line; do
+    [[ -n "${line//[[:space:]]/}" ]] || continue
     eval "$array_name+=(\"\$line\")"
   done < <("$@")
 }
 
+# Shared by the "agents refresh" and per-workspace "refresh" subcommands:
+# pull and recreate only the compose services already running, skipping the
+# rest. "$@" is the compose invocation (e.g. `_agents_dc` or
+# `compose_for_workspace "$workspace"`) to run ps/pull/up through.
+refresh_running_services() {
+  local no_running_msg="$1"
+  local refreshed_msg_fmt="$2"
+  shift 2
+  local running_services=()
+  read_lines_into_array running_services "$@" ps --status running --services
+  if [[ ${#running_services[@]} -eq 0 ]]; then
+    printf '%s\n' "$no_running_msg"
+    return
+  fi
+  "$@" pull "${running_services[@]}"
+  "$@" up -d "${running_services[@]}"
+  printf "$refreshed_msg_fmt\n" "${running_services[*]}"
+}
+
 cacert_compose_args() {
   local compose_file="$1"
   local override_name="$2"
@@ -920,7 +949,8 @@ config_workspace() {
   [[ -f "$env_file" ]] && die "workspace already configured: $env_file"
 
   local port_base serve_port mcp_port prod_port wiki_token prod_token agents_data_dir
-  agents_data_dir="$(absolute_path "${AGENTS_DATA_DIR:-.agents-data}" "$DEFAULT_MANAGER_DIR")"
+  # Same canonical rule as agents_compose: .agents-data next to the workspaces.
+  agents_data_dir="$(absolute_path "${AGENTS_DATA_DIR:-$(dirname "$target_path")/.agents-data}" "$DEFAULT_MANAGER_DIR")"
   port_base="$(find_free_workspace_port_base 3100)"
   serve_port="$port_base"
   mcp_port=$((port_base + 1))
@@ -1069,6 +1099,9 @@ main() {
     down)
       compose_for_workspace "$workspace" down
       ;;
+    refresh)
+      refresh_running_services "No running workspace containers to refresh: $workspace" "Refreshed running workspace containers: $workspace (%s)" compose_for_workspace "$workspace"
+      ;;
     logs)
       local log_args=()
       read_lines_into_array log_args logs_args "$@"