@doidor/agentrig 0.8.0 → 0.10.0

package/dist/core/audit.js

@@ -1,7 +1,9 @@
 import { existsSync, statSync, readdirSync } from "node:fs";
 import { join, resolve } from "node:path";
+import YAML from "yaml";
 import { readText } from "./fsutil.js";
 import { loadCanonicalChecks } from "./knowledge.js";
+import { sameFamily } from "./model-family.js";
 function frontmatter(text) {
     if (!text || !text.startsWith("---"))
         return null;
@@ -53,7 +55,43 @@ function scoreCheck(repoRoot, c) {
                 ? { score: 1, evidence: "" }
                 : { score: 0.5, evidence: `missing keys: ${missing.join(", ")}` };
         }
+        case "frontmatter-keys-all": {
+            // Walk every <dir>/<entry>/<file> and assert each has the required frontmatter keys.
+            // Catches the gap where today only one skill (self-verify) is spot-checked.
+            const dir = String(c.path);
+            const fileName = String(c.file ?? "SKILL.md");
+            const abs = rel(dir);
+            if (!existsSync(abs) || !statSync(abs).isDirectory()) {
+                return { score: 0, evidence: `missing dir ${dir}` };
+            }
+            const keys = c.keys ?? [];
+            const offenders = [];
+            for (const entry of readdirSync(abs)) {
+                if (entry.startsWith(".") || entry.startsWith("_"))
+                    continue;
+                const subAbs = join(abs, entry);
+                if (!statSync(subAbs).isDirectory())
+                    continue;
+                const filePath = join(subAbs, fileName);
+                if (!existsSync(filePath)) {
+                    offenders.push(`${entry}/${fileName} missing`);
+                    continue;
+                }
+                const fm = frontmatter(readText(filePath));
+                if (fm == null) {
+                    offenders.push(`${entry} no frontmatter`);
+                    continue;
+                }
+                const missing = keys.filter((k) => !new RegExp("^\\s*" + k + "\\s*:", "m").test(fm));
+                if (missing.length)
+                    offenders.push(`${entry} missing ${missing.join("/")}`);
+            }
+            if (offenders.length === 0)
+                return { score: 1, evidence: "" };
+            return { score: 0.5, evidence: offenders.join("; ") };
+        }
         case "roles-distinct-models": {
+            // Legacy: kept for back-compat. Prefer roles-distinct-families.
             const key = String(c.key ?? "model");
             const dev = extractValue(read(String(c.developer)), key);
             const rev = extractValue(read(String(c.reviewer)), key);
@@ -63,10 +101,188 @@ function scoreCheck(repoRoot, c) {
                 ? { score: 1, evidence: "" }
                 : { score: 0.5, evidence: `developer and reviewer share model "${dev}"` };
         }
+        case "roles-distinct-families": {
+            // The single-model-bias mitigation principle is about model FAMILIES, not exact ids.
+            // claude-sonnet-4.5 vs claude-sonnet-4.6 must FAIL here.
+            const key = String(c.key ?? "model");
+            const dev = extractValue(read(String(c.developer)), key);
+            const rev = extractValue(read(String(c.reviewer)), key);
+            if (!dev || !rev)
+                return { score: 0, evidence: "developer/reviewer model not declared" };
+            if (!sameFamily(dev, rev))
+                return { score: 1, evidence: "" };
+            return { score: 0, evidence: `developer "${dev}" and reviewer "${rev}" share a model family` };
+        }
+        case "state-machine-dag": {
+            // Structural: parse the state machine YAML and assert it actually IS a DAG with
+            // the minimum lifecycle present, instead of just substring-matching "states:".
+            const p = String(c.path);
+            const text = read(p);
+            if (text == null)
+                return { score: 0, evidence: `missing ${p}` };
+            let parsed;
+            try {
+                parsed = YAML.parse(text);
+            }
+            catch (e) {
+                return { score: 0, evidence: `${p} is not valid YAML: ${e.message}` };
+            }
+            const states = Array.isArray(parsed?.states) ? parsed.states : [];
+            const transitions = Array.isArray(parsed?.transitions) ? parsed.transitions : [];
+            const minStates = Number(c.minStates ?? 6);
+            const requirePath = String(c.requirePath ?? "queued->merged");
+            const problems = [];
+            if (states.length < minStates)
+                problems.push(`${states.length} states, need ≥${minStates}`);
+            const stateNames = new Set(states.map((s) => String(s?.name ?? "")).filter(Boolean));
+            const badTransitions = transitions.filter((t) => !t?.from || !t?.to || !t?.trigger);
+            if (badTransitions.length)
+                problems.push(`${badTransitions.length} transitions missing from/to/trigger`);
+            // BFS for the required path. The 'any' wildcard from-state acts as a universal source.
+            const [src, dst] = requirePath.split("->");
+            if (src && dst) {
+                const adj = new Map();
+                for (const t of transitions) {
+                    const from = String(t?.from ?? "");
+                    const to = String(t?.to ?? "");
+                    if (!from || !to)
+                        continue;
+                    if (from === "any") {
+                        for (const s of stateNames) {
+                            if (!adj.has(s))
+                                adj.set(s, new Set());
+                            adj.get(s).add(to);
+                        }
+                    }
+                    else {
+                        if (!adj.has(from))
+                            adj.set(from, new Set());
+                        adj.get(from).add(to);
+                    }
+                }
+                if (!hasPath(adj, src, dst))
+                    problems.push(`no path ${src}→${dst}`);
+            }
+            if (problems.length === 0)
+                return { score: 1, evidence: "" };
+            return { score: 0.5, evidence: problems.join("; ") };
+        }
+        case "quality-probe": {
+            // A handful of cheap content sanity checks (P1.4). Each probe has a `probe` kind.
+            const probe = String(c.probe ?? "");
+            const p = String(c.path ?? "");
+            switch (probe) {
+                case "no-unfilled-placeholders": {
+                    const text = read(p);
+                    if (text == null)
+                        return { score: 0, evidence: `missing ${p}` };
+                    // Strip ```code blocks``` and `inline code` before scanning, so the probe doesn't
+                    // false-positive on docs that *describe* placeholder syntax (e.g. "{{VAR}} substitution").
+                    const stripped = text
+                        .replace(/```[\s\S]*?```/g, "")
+                        .replace(/`[^`\n]*`/g, "");
+                    const tokens = stripped.match(/\{\{[A-Z_]+\}\}/g) ?? [];
+                    return tokens.length === 0
+                        ? { score: 1, evidence: "" }
+                        : { score: 0, evidence: `unfilled tokens in ${p}: ${[...new Set(tokens)].join(", ")}` };
+                }
+                case "axes-json-coherent": {
+                    const text = read(p);
+                    if (text == null)
+                        return { score: 0, evidence: `missing ${p}` };
+                    let j;
+                    try {
+                        j = JSON.parse(text);
+                    }
+                    catch (e) {
+                        return { score: 0, evidence: `${p} not valid JSON: ${e.message}` };
+                    }
+                    if (!j?.types)
+                        return { score: 0, evidence: `${p} missing "types"` };
+                    const issues = [];
+                    for (const [tname, t] of Object.entries(j.types)) {
+                        if (!t?.categories) {
+                            issues.push(`${tname}: no categories`);
+                            continue;
+                        }
+                        for (const [cname, cat] of Object.entries(t.categories)) {
+                            for (const [axis, spec] of Object.entries(cat)) {
+                                // Both shapes: v1 = ["CODE",...]; v2 = { codes: [...], weight, veto }
+                                const codes = Array.isArray(spec) ? spec : spec?.codes;
+                                if (!Array.isArray(codes) || codes.length === 0) {
+                                    issues.push(`${tname}/${cname}/${axis}: no issue codes`);
+                                }
+                            }
+                        }
+                    }
+                    return issues.length === 0
+                        ? { score: 1, evidence: "" }
+                        : { score: 0.5, evidence: issues.join("; ") };
+                }
+                case "checks-json-coherent": {
+                    const text = read(p);
+                    if (text == null)
+                        return { score: 0, evidence: `missing ${p}` };
+                    let j;
+                    try {
+                        j = JSON.parse(text);
+                    }
+                    catch (e) {
+                        return { score: 0, evidence: `${p} not valid JSON: ${e.message}` };
+                    }
+                    const checks = j?.checks ?? [];
+                    const knownTypes = new Set([
+                        "path-exists", "file-contains", "dir-min", "frontmatter-keys",
+                        "frontmatter-keys-all", "roles-distinct-models", "roles-distinct-families",
+                        "state-machine-dag", "quality-probe",
+                    ]);
+                    const ids = checks.map((x) => x?.id ?? "");
+                    const dupIds = ids.filter((id, i) => id && ids.indexOf(id) !== i);
+                    const badTypes = checks.filter((x) => !knownTypes.has(String(x?.type ?? "")));
+                    const issues = [];
+                    if (dupIds.length)
+                        issues.push(`duplicate ids: ${[...new Set(dupIds)].join(", ")}`);
+                    if (badTypes.length)
+                        issues.push(`unknown check types: ${badTypes.map((x) => x?.type).join(", ")}`);
+                    return issues.length === 0
+                        ? { score: 1, evidence: "" }
+                        : { score: 0.5, evidence: issues.join("; ") };
+                }
+                case "context-md-present": {
+                    return existsSync(rel(p))
+                        ? { score: 1, evidence: "" }
+                        : { score: 0.5, evidence: `${p} missing — run \`agentrig init\` to investigate the repo` };
+                }
+                default:
+                    return { score: 0, evidence: `unknown quality probe "${probe}"` };
+            }
+        }
         default:
             return { score: 0, evidence: `unknown check type ${c.type}` };
     }
 }
+/** BFS path existence. Used by the state-machine-dag check. */
+function hasPath(adj, src, dst) {
+    if (src === dst)
+        return true;
+    const seen = new Set([src]);
+    const queue = [src];
+    while (queue.length) {
+        const cur = queue.shift();
+        const nexts = adj.get(cur);
+        if (!nexts)
+            continue;
+        for (const n of nexts) {
+            if (n === dst)
+                return true;
+            if (!seen.has(n)) {
+                seen.add(n);
+                queue.push(n);
+            }
+        }
+    }
+    return false;
+}
 /** Resolve which checks to use: prefer the repo's installed checks.json, else AgentRig canonical. */
 function resolveChecks(repoRoot) {
     const repoChecks = readText(join(repoRoot, ".agentrig", "eval", "checks.json"));
@@ -84,24 +300,36 @@ export function auditHarness(repoRoot) {
     const { checks, source } = resolveChecks(repoRoot);
     const results = checks.map((c) => {
         const { score, evidence } = scoreCheck(repoRoot, c);
-        return { id: c.id, principle: c.principle, title: c.title, score, evidence };
+        // Default layer is "completeness" so unannotated check files still work.
+        const layer = c.layer === "quality" ? "quality" : "completeness";
+        return { id: c.id, principle: c.principle, title: c.title, score, evidence, layer };
     });
-    let wSum = 0;
-    let wScore = 0;
+    let cwSum = 0, cwScore = 0; // completeness
+    let qwSum = 0, qwScore = 0; // quality
     const principleAcc = new Map();
     for (let i = 0; i < results.length; i++) {
+        const r = results[i];
         const w = Number(checks[i].weight ?? 1);
-        wSum += w;
-        wScore += w * results[i].score;
-        const acc = principleAcc.get(results[i].principle) ?? { sum: 0, n: 0 };
-        acc.sum += results[i].score;
+        if (r.layer === "quality") {
+            qwSum += w;
+            qwScore += w * r.score;
+        }
+        else {
+            cwSum += w;
+            cwScore += w * r.score;
+        }
+        const acc = principleAcc.get(r.principle) ?? { sum: 0, n: 0 };
+        acc.sum += r.score;
         acc.n += 1;
-        principleAcc.set(results[i].principle, acc);
+        principleAcc.set(r.principle, acc);
     }
-    const aggregate = wSum ? wScore / wSum : 0;
+    const aggregate = cwSum ? cwScore / cwSum : 0;
+    const qualityAggregate = qwSum ? qwScore / qwSum : 0;
     return {
         harnessScore: Math.round(aggregate * 1000) / 10,
         aggregate,
+        qualityScore: Math.round(qualityAggregate * 1000) / 10,
+        qualityAggregate,
         results,
         byPrinciple: [...principleAcc.entries()]
             .sort((a, b) => a[0] - b[0])

package/dist/core/audit.js.map

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package/dist/core/install.js

@@ -63,11 +63,18 @@ function extractFrontmatterValue(text, key) {
 /**
  * Deterministically lay down the canonical harness artifacts. This guarantees a baseline harness
  * (and a passing audit) regardless of the agent; the agent then tailors content afterwards.
+ *
+ * By default (`preserve: true`) existing destination files/dirs are left untouched and reported
+ * via `preserved`, so `init` is safe to run on a repo that already has agent content. Pass
+ * `preserve: false` to overwrite everything (used by `init --force` and by `update` for
+ * overwrite-policy machinery refresh).
  */
 export function install(repoRoot, manifest, options = {}) {
     const vars = { SKILLS_INVENTORY: skillsInventory(manifest), ...(options.vars ?? baseVars(repoRoot)) };
+    const preserve = options.preserve !== false;
     const installed = [];
     const plan = [];
+    const preserved = [];
     const now = new Date().toISOString();
     for (const artifact of manifest.artifacts) {
         plan.push({ id: artifact.id, principle: artifact.principle, dest: artifact.dest, kind: artifact.kind });
@@ -76,13 +83,33 @@ export function install(repoRoot, manifest, options = {}) {
         const src = resolveSrc(artifact.src);
         const dest = join(repoRoot, artifact.dest);
         if (artifact.kind === "template") {
+            if (preserve && existsSync(dest)) {
+                preserved.push(artifact.dest);
+                continue;
+            }
             const text = readText(src);
             if (text == null)
                 throw new Error(`template source missing: ${artifact.src}`);
             ensureDir(join(dest, ".."));
             writeFileSync(dest, substitute(text, vars));
         }
+        else if (artifact.kind === "dir") {
+            if (preserve) {
+                // Recursively copy only files that don't already exist; report the rest as preserved.
+                const addOnly = addOnlyCopy(repoRoot, src, dest, artifact.mode);
+                if (addOnly.drifted.length)
+                    preserved.push(...addOnly.drifted);
+            }
+            else {
+                copyPath(src, dest, artifact.mode);
+            }
+        }
         else {
+            // kind: "file"
+            if (preserve && existsSync(dest)) {
+                preserved.push(artifact.dest);
+                continue;
+            }
             copyPath(src, dest, artifact.mode);
         }
         installed.push({
@@ -92,6 +119,6 @@ export function install(repoRoot, manifest, options = {}) {
             installedAt: now,
         });
     }
-    return { installed, plan };
+    return { installed, plan, preserved };
 }
 //# sourceMappingURL=install.js.map

package/dist/core/install.js.map

@@ -1 +1 @@
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package/dist/core/model-family.js

@@ -0,0 +1,31 @@
+const PATTERNS = [
+    { family: "anthropic-claude", test: /^(anthropic[\.\/-])?claude([-_\.]|$)/i },
+    { family: "openai-gpt", test: /^(openai[\.\/-])?(gpt|o[1-9]|codex|davinci|chatgpt)([-_\.]|$)/i },
+    { family: "google-gemini", test: /^(google[\.\/-])?(gemini|palm|bard|flash)([-_\.]|$)/i },
+    { family: "mistral", test: /^(mistral|mixtral|codestral|ministral)([-_\.]|$)/i },
+    { family: "deepseek", test: /^deepseek([-_\.]|$)/i },
+    { family: "meta-llama", test: /^(meta[\.\/-])?(llama|code-?llama)([-_\.]|$)/i },
+    { family: "xai-grok", test: /^(xai[\.\/-])?grok([-_\.]|$)/i },
+    { family: "cohere", test: /^(cohere[\.\/-])?(command|aya)([-_\.]|$)/i },
+    { family: "qwen", test: /^qwen([-_\.]|$)/i },
+];
+export function modelFamily(modelId) {
+    const id = modelId.trim();
+    if (!id)
+        return "";
+    for (const p of PATTERNS)
+        if (p.test.test(id))
+            return p.family;
+    // Unknown family — return a stable token derived from the id prefix.
+    const m = id.match(/^([a-z0-9]+)/i);
+    return m ? `unknown:${m[1].toLowerCase()}` : `unknown:${id}`;
+}
+/** True if two model ids belong to the same family (or are literally identical). */
+export function sameFamily(a, b) {
+    if (!a || !b)
+        return false;
+    if (a === b)
+        return true;
+    return modelFamily(a) === modelFamily(b);
+}
+//# sourceMappingURL=model-family.js.map

package/dist/core/model-family.js.map

@@ -0,0 +1 @@
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