@djolex999/vir-cli 0.7.0 → 0.7.2

package/dist/pipeline/writer.js

@@ -3,6 +3,7 @@ import { appendFileSync, existsSync, mkdirSync, readFileSync, readdirSync, write
 import { join, relative } from "node:path";
 import { embeddingForNote, isOllamaAvailableCached, } from "../search/embedder.js";
 import { ARTICLES_SUBDIR, articleRelPath, buildArticleFrontmatter, } from "./articleDistiller.js";
+import { TOPICS_SUBDIR, buildComposeFrontmatter, composeRelPath, } from "./composer.js";
 const CATEGORY_DIR = {
     pattern: "patterns",
     gotcha: "gotchas",
@@ -12,10 +13,16 @@ const CATEGORY_DIR = {
 export class VaultWriter {
     root;
     db;
+    topicsDir;
     constructor(cfg, db = null) {
         this.root = join(cfg.vaultPath, cfg.outputDir);
         this.db = db;
-        for (const sub of [...Object.values(CATEGORY_DIR), ARTICLES_SUBDIR]) {
+        this.topicsDir = cfg.topicsDir ?? TOPICS_SUBDIR;
+        for (const sub of [
+            ...Object.values(CATEGORY_DIR),
+            ARTICLES_SUBDIR,
+            this.topicsDir,
+        ]) {
             const p = join(this.root, sub);
             if (!existsSync(p))
                 mkdirSync(p, { recursive: true });
@@ -122,6 +129,67 @@ export class VaultWriter {
             // never crash the writer on embedding failure
         }
     }
+    // Write a synthesized topic page into topics/<slug>.md. Parallel to write()/
+    // writeArticle() but uses the topic frontmatter and a deterministic Sources
+    // section built from the real source slugs (so every wikilink resolves and
+    // backlinks the topic into each source's graph). Idempotent: re-composing the
+    // same slug overwrites the body; created/updated come from the caller, which
+    // preserves the original created date via the topics table.
+    async writeTopic(topic, mode = "append") {
+        const relPath = composeRelPath(topic.slug, this.topicsDir);
+        const fullPath = join(this.root, relPath);
+        const frontmatter = buildComposeFrontmatter({
+            title: topic.title,
+            topicQuery: topic.topicQuery,
+            sources: topic.sources,
+            confidence: topic.confidence,
+            model: topic.model,
+            created: topic.createdAt.slice(0, 10),
+            updated: topic.updatedAt.slice(0, 10),
+        });
+        const sourcesSection = topic.sources.length > 0
+            ? "\n## Sources\n\n" +
+                topic.sources.map((s) => `- [[${s.slug}]]`).join("\n") +
+                "\n"
+            : "";
+        const body = wikilinkRelated(topic.content);
+        const finalContent = `${frontmatter}# ${topic.title}\n\n${body}\n${sourcesSection}`;
+        writeFileSync(fullPath, finalContent);
+        await this.maybeEmbedTopic(topic.slug, finalContent);
+        if (mode === "append") {
+            this.appendIndex({
+                date: topic.updatedAt.slice(0, 10),
+                topic: topic.title,
+                category: "topic",
+                project: "topics",
+                relPath,
+            });
+            this.appendLog({
+                ts: new Date().toISOString().slice(0, 16).replace("T", " "),
+                category: "topic",
+                topic: topic.title,
+                project: "topics",
+            });
+        }
+        return fullPath;
+    }
+    // Best-effort topic embedding, keyed by the topic id (slug) in the topics
+    // table. Stored for future topic-aware retrieval; failure never fails a write.
+    async maybeEmbedTopic(id, fileContent) {
+        if (!this.db)
+            return;
+        try {
+            if (!(await isOllamaAvailableCached()))
+                return;
+            const vec = await embeddingForNote(fileContent);
+            if (!vec)
+                return;
+            this.db.storeTopicEmbedding(id, vec);
+        }
+        catch {
+            // never crash the writer on embedding failure
+        }
+    }
     // Rebuild index.md from scratch off the distilled rows in SQLite, sorted by
     // date descending. Used by the --rewrite-only run so re-rendering notes never
     // appends duplicate index rows. Never touches log.md. No-op without a db.
@@ -151,6 +219,16 @@ export class VaultWriter {
                 link: `[[${rel}|${a.title}]]`,
             });
         }
+        for (const t of this.db.listTopics()) {
+            const rel = composeRelPath(t.id, this.topicsDir).replace(/\.md$/, "");
+            entries.push({
+                date: (t.updatedAt ?? t.createdAt ?? "").slice(0, 10),
+                topic: t.title,
+                category: "topic",
+                project: "topics",
+                link: `[[${rel}|${t.title}]]`,
+            });
+        }
         entries.sort((x, y) => y.date.localeCompare(x.date));
         const header = "# vir — Distilled Knowledge\n\n" +
             "| Date | Topic | Category | Project | Link |\n" +

package/dist/pipeline/writer.js.map

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package/dist/state/db.js

@@ -78,6 +78,18 @@ export class StateDb {
         embedding TEXT
       );
       CREATE INDEX IF NOT EXISTS idx_articles_hash ON articles(hash);
+      CREATE TABLE IF NOT EXISTS topics (
+        id TEXT PRIMARY KEY,
+        topic_text TEXT NOT NULL,
+        title TEXT NOT NULL,
+        content TEXT NOT NULL,
+        source_note_ids TEXT NOT NULL,
+        confidence REAL,
+        model TEXT NOT NULL,
+        created_at TEXT NOT NULL,
+        updated_at TEXT NOT NULL,
+        embedding TEXT
+      );
     `);
         this.migrate();
     }
@@ -430,10 +442,95 @@ export class StateDb {
         }
         return out;
     }
+    // ── topics ──────────────────────────────────────────────────────────────
+    // Synthesized topic pages (`vir compose`). Their own table so the `topic`
+    // taxonomy never pollutes session/article listings, stats, or the rewrite
+    // path. Read methods guard against a missing table — the read-only MCP path
+    // skips migrations, so an upgraded-but-never-rewritten install lacks it.
+    hasTopicsTable() {
+        try {
+            const r = this.db
+                .prepare("SELECT name FROM sqlite_master WHERE type='table' AND name='topics'")
+                .get();
+            return r !== undefined;
+        }
+        catch {
+            return false;
+        }
+    }
+    getTopic(id) {
+        if (!this.hasTopicsTable())
+            return undefined;
+        const r = this.db
+            .prepare("SELECT * FROM topics WHERE id = ?")
+            .get(id);
+        if (!r)
+            return undefined;
+        return mapTopicRow(r);
+    }
+    recordTopic(opts) {
+        // ON CONFLICT preserves created_at (re-composing a topic keeps its birth
+        // date) and bumps updated_at — the idempotency contract from the spec.
+        this.db
+            .prepare(`INSERT INTO topics (
+           id, topic_text, title, content, source_note_ids,
+           confidence, model, created_at, updated_at
+         )
+         VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?)
+         ON CONFLICT(id) DO UPDATE SET
+           topic_text = excluded.topic_text,
+           title = excluded.title,
+           content = excluded.content,
+           source_note_ids = excluded.source_note_ids,
+           confidence = excluded.confidence,
+           model = excluded.model,
+           updated_at = excluded.updated_at`)
+            .run(opts.id, opts.topicText, opts.title, opts.content, JSON.stringify(opts.sourceNoteIds), opts.confidence ?? null, opts.model, opts.createdAt, opts.updatedAt);
+    }
+    listTopics() {
+        if (!this.hasTopicsTable())
+            return [];
+        const rows = this.db
+            .prepare(`SELECT id, topic_text, title, content, source_note_ids,
+                confidence, model, created_at, updated_at
+         FROM topics`)
+            .all();
+        return rows.map(mapTopicRow);
+    }
+    // Future-proofing for v0.7.3 (topic-aware retrieval). Stored now so topics
+    // are searchable then without a backfill; the retriever does not read these
+    // yet — keeping topics out of `vir query` per the plugin-compat contract.
+    storeTopicEmbedding(id, embedding) {
+        this.db
+            .prepare("UPDATE topics SET embedding = ? WHERE id = ?")
+            .run(JSON.stringify(embedding), id);
+    }
     close() {
         this.db.close();
     }
 }
+function mapTopicRow(r) {
+    let sourceNoteIds = [];
+    try {
+        const parsed = JSON.parse(r.source_note_ids);
+        if (Array.isArray(parsed))
+            sourceNoteIds = parsed.map((x) => String(x));
+    }
+    catch {
+        sourceNoteIds = [];
+    }
+    return {
+        id: r.id,
+        topicText: r.topic_text,
+        title: r.title,
+        content: r.content,
+        sourceNoteIds,
+        confidence: r.confidence,
+        model: r.model,
+        createdAt: r.created_at,
+        updatedAt: r.updated_at,
+    };
+}
 function deriveSessionId(path) {
     const base = path.split("/").pop() ?? path;
     return base.replace(/\.jsonl$/, "");

package/dist/state/db.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@djolex999/vir-cli",
-  "version": "0.7.0",
+  "version": "0.7.2",
   "description": "An LLM Wiki for Claude Code, in your Obsidian vault.",
   "author": "Djordje Marković <djordje@growthq.rs>",
   "license": "MIT",
@@ -36,6 +36,7 @@
   ],
   "scripts": {
     "build": "tsc",
+    "prepublishOnly": "npm run build && npm test",
     "dev": "tsc --watch",
     "start": "node dist/cli.js",
     "typecheck": "tsc --noEmit",