@djolex999/vir-cli 0.1.0

package/dist/pipeline/writer.js

@@ -0,0 +1,195 @@
+import chalk from "chalk";
+import { appendFileSync, existsSync, mkdirSync, readFileSync, readdirSync, writeFileSync, } from "node:fs";
+import { join } from "node:path";
+import { embeddingForNote, isOllamaAvailableCached, } from "../search/embedder.js";
+const CATEGORY_DIR = {
+    pattern: "patterns",
+    gotcha: "gotchas",
+    decision: "decisions",
+    tool: "tools",
+};
+export class VaultWriter {
+    root;
+    db;
+    constructor(cfg, db = null) {
+        this.root = join(cfg.vaultPath, cfg.outputDir);
+        this.db = db;
+        for (const sub of Object.values(CATEGORY_DIR)) {
+            const p = join(this.root, sub);
+            if (!existsSync(p))
+                mkdirSync(p, { recursive: true });
+        }
+        this.ensureIndex();
+        this.ensureLog();
+    }
+    async write(session, note) {
+        const { classification, markdown } = note;
+        const slug = makeSlug(classification.topic, session.sessionId);
+        const subDir = CATEGORY_DIR[classification.category];
+        const relPath = join(subDir, `${slug}.md`);
+        const fullPath = join(this.root, relPath);
+        const frontmatter = [
+            "---",
+            `topic: "${classification.topic.replace(/"/g, '\\"')}"`,
+            `category: ${classification.category}`,
+            `project: "${classification.project.replace(/"/g, '\\"')}"`,
+            `session_id: ${session.sessionId}`,
+            `date: ${session.startedAt ?? new Date().toISOString()}`,
+            `confidence: ${classification.confidence}`,
+            "---",
+            "",
+        ].join("\n");
+        const projectSlug = kebab(classification.project);
+        const categorySlug = classification.category;
+        const wikilinkHeader = `Project: [[${projectSlug}]]\n` +
+            `Category: [[${categorySlug}]]\n\n`;
+        const body = wikilinkRelated(markdown);
+        const finalContent = frontmatter + wikilinkHeader + body + "\n";
+        writeFileSync(fullPath, finalContent);
+        await this.maybeEmbed(session, note, finalContent);
+        this.appendIndex({
+            date: (session.startedAt ?? new Date().toISOString()).slice(0, 10),
+            topic: classification.topic,
+            category: classification.category,
+            project: classification.project,
+            relPath,
+        });
+        this.appendLog({
+            ts: new Date().toISOString().slice(0, 16).replace("T", " "),
+            category: classification.category,
+            topic: classification.topic,
+            project: classification.project,
+        });
+        return [fullPath];
+    }
+    // Best-effort: embed the freshly-written note via Ollama and store the
+    // vector. Any failure (Ollama down, timeout, model missing) is swallowed —
+    // an embedding miss must never fail a write.
+    async maybeEmbed(session, note, fileContent) {
+        if (!this.db)
+            return;
+        try {
+            const available = await isOllamaAvailableCached();
+            if (!available)
+                return;
+            const vec = await embeddingForNote(fileContent);
+            if (!vec)
+                return;
+            this.db.storeEmbedding(session.sessionId, vec);
+            console.log(chalk.dim(`  embedded ${note.classification.topic} (${vec.length}d)`));
+        }
+        catch {
+            // never crash the writer on embedding failure
+        }
+    }
+    ensureIndex() {
+        const p = join(this.root, "index.md");
+        if (!existsSync(p)) {
+            writeFileSync(p, "# vir — Distilled Knowledge\n\n| Date | Topic | Category | Project | Link |\n|------|-------|----------|---------|------|\n");
+        }
+    }
+    ensureLog() {
+        const p = join(this.root, "log.md");
+        if (!existsSync(p)) {
+            writeFileSync(p, "# vir — Run Log\n\n");
+        }
+    }
+    appendIndex(row) {
+        const p = join(this.root, "index.md");
+        const link = `[[${row.relPath.replace(/\.md$/, "")}|${row.topic}]]`;
+        const line = `| ${row.date} | ${row.topic} | ${row.category} | ${row.project} | ${link} |\n`;
+        const current = readFileSync(p, "utf8");
+        // Insert after the table header (first occurrence of '|------')
+        const headerIdx = current.indexOf("|------");
+        if (headerIdx === -1) {
+            appendFileSync(p, line);
+            return;
+        }
+        const newlineAfter = current.indexOf("\n", headerIdx);
+        const updated = current.slice(0, newlineAfter + 1) + line + current.slice(newlineAfter + 1);
+        writeFileSync(p, updated);
+    }
+    appendLog(entry) {
+        const p = join(this.root, "log.md");
+        appendFileSync(p, `## [${entry.ts}] ${entry.category} | ${entry.topic} | ${entry.project}\n\n`);
+    }
+    noteCount() {
+        let n = 0;
+        for (const sub of Object.values(CATEGORY_DIR)) {
+            const dir = join(this.root, sub);
+            if (!existsSync(dir))
+                continue;
+            try {
+                n += readdirSync(dir).filter((f) => f.endsWith(".md")).length;
+            }
+            catch {
+                // ignore
+            }
+        }
+        return n;
+    }
+}
+function makeSlug(topic, sessionId) {
+    const base = kebab(topic).slice(0, 50);
+    const suffix = sessionId.slice(0, 8);
+    return base.length > 0 ? `${base}-${suffix}` : `note-${suffix}`;
+}
+export function kebab(s) {
+    return s
+        .toLowerCase()
+        .replace(/[^a-z0-9]+/g, "-")
+        .replace(/^-+|-+$/g, "");
+}
+// Rewrites the bullet list under a `## Related` heading so each item
+// becomes an Obsidian wikilink to a kebab-cased slug of the item's text.
+// Stops at the next heading or end of document.
+export function wikilinkRelated(markdown) {
+    const lines = markdown.split("\n");
+    const out = [];
+    let inRelated = false;
+    for (const line of lines) {
+        if (/^##\s+related\b/i.test(line)) {
+            inRelated = true;
+            out.push(line);
+            continue;
+        }
+        if (inRelated && /^#{1,6}\s+/.test(line)) {
+            inRelated = false;
+            out.push(line);
+            continue;
+        }
+        if (inRelated) {
+            const bullet = line.match(/^(\s*[-*]\s+)(.*)$/);
+            if (bullet) {
+                const prefix = bullet[1] ?? "- ";
+                const text = (bullet[2] ?? "").trim();
+                if (text.length === 0) {
+                    out.push(line);
+                }
+                else if (/^\[\[.+\]\]$/.test(text)) {
+                    // already a wikilink — leave it
+                    out.push(line);
+                }
+                else {
+                    const slug = kebab(stripWikilink(text));
+                    out.push(`${prefix}[[${slug}]]`);
+                }
+                continue;
+            }
+        }
+        out.push(line);
+    }
+    return out.join("\n");
+}
+function stripWikilink(s) {
+    // If the model already partially wrapped it like "[[Something]]" or
+    // "[Something](url)", reduce to the inner text before kebab-casing.
+    const wiki = s.match(/^\[\[(.+?)\]\]$/);
+    if (wiki)
+        return wiki[1] ?? s;
+    const md = s.match(/^\[(.+?)\]\(.+\)$/);
+    if (md)
+        return md[1] ?? s;
+    return s;
+}
+//# sourceMappingURL=writer.js.map

package/dist/pipeline/writer.js.map

@@ -0,0 +1 @@
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package/dist/search/embedder.js

@@ -0,0 +1,93 @@
+const OLLAMA_BASE = "http://localhost:11434";
+export const EMBED_MODEL = "nomic-embed-text";
+const EMBED_TIMEOUT_MS = 10_000;
+const PING_TIMEOUT_MS = 3_000;
+export class EmbedderError extends Error {
+    constructor(message) {
+        super(message);
+        this.name = "EmbedderError";
+    }
+}
+export async function embed(text) {
+    const ac = new AbortController();
+    const t = setTimeout(() => ac.abort(), EMBED_TIMEOUT_MS);
+    try {
+        const resp = await fetch(`${OLLAMA_BASE}/api/embeddings`, {
+            method: "POST",
+            headers: { "Content-Type": "application/json" },
+            body: JSON.stringify({ model: EMBED_MODEL, prompt: text }),
+            signal: ac.signal,
+        });
+        if (!resp.ok) {
+            throw new EmbedderError(`Ollama ${resp.status}: ${await resp.text().catch(() => "")}`);
+        }
+        const data = (await resp.json());
+        if (data.error)
+            throw new EmbedderError(`Ollama error: ${data.error}`);
+        if (!Array.isArray(data.embedding) || data.embedding.length === 0) {
+            throw new EmbedderError("Ollama returned no embedding");
+        }
+        return data.embedding.map((n) => Number(n));
+    }
+    finally {
+        clearTimeout(t);
+    }
+}
+export function cosineSimilarity(a, b) {
+    if (a.length === 0 || b.length === 0 || a.length !== b.length)
+        return 0;
+    let dot = 0;
+    let magA = 0;
+    let magB = 0;
+    for (let i = 0; i < a.length; i += 1) {
+        const x = a[i] ?? 0;
+        const y = b[i] ?? 0;
+        dot += x * y;
+        magA += x * x;
+        magB += y * y;
+    }
+    if (magA === 0 || magB === 0)
+        return 0;
+    const sim = dot / (Math.sqrt(magA) * Math.sqrt(magB));
+    // Clamp to [0, 1] — embeddings are typically positively correlated; negative
+    // values would otherwise distort the topK ordering downstream.
+    if (!Number.isFinite(sim))
+        return 0;
+    if (sim < 0)
+        return 0;
+    if (sim > 1)
+        return 1;
+    return sim;
+}
+export async function isOllamaAvailable() {
+    const ac = new AbortController();
+    const t = setTimeout(() => ac.abort(), PING_TIMEOUT_MS);
+    try {
+        const resp = await fetch(`${OLLAMA_BASE}/api/tags`, { signal: ac.signal });
+        return resp.ok;
+    }
+    catch {
+        return false;
+    }
+    finally {
+        clearTimeout(t);
+    }
+}
+// Module-level memo so a long-running daemon doesn't hammer /api/tags on every
+// session. Invalidated only by process restart, which is fine for our cadence.
+let _availabilityCache = null;
+export function isOllamaAvailableCached() {
+    if (_availabilityCache === null) {
+        _availabilityCache = isOllamaAvailable();
+    }
+    return _availabilityCache;
+}
+export async function embeddingForNote(text) {
+    try {
+        return await embed(text);
+    }
+    catch {
+        return null;
+    }
+}
+//# sourceMappingURL=embedder.js.map

package/dist/search/embedder.js.map

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package/dist/search/retriever.js

@@ -0,0 +1,212 @@
+import { existsSync, readFileSync, readdirSync, statSync } from "node:fs";
+import { join, relative } from "node:path";
+import { cosineSimilarity, embed, isOllamaAvailable, } from "./embedder.js";
+const SKIP_FILES = new Set(["index.md", "log.md"]);
+const MIN_EMBEDDING_SCORE = 0.3;
+export async function search(cfg, db, query, topK = 8) {
+    if (await isOllamaAvailable()) {
+        const hits = await searchByEmbedding(cfg, db, query, topK);
+        // If embeddings produced at least one match above the floor, take it.
+        // Otherwise fall through to TF-IDF: low cosine on every doc means the
+        // query is semantically off; lexical overlap might still find a match.
+        if (hits.length > 0)
+            return hits;
+    }
+    return searchByTfIdf(cfg, query, topK);
+}
+async function searchByEmbedding(cfg, db, query, topK) {
+    let queryVec;
+    try {
+        queryVec = await embed(query);
+    }
+    catch {
+        return [];
+    }
+    const root = vaultRoot(cfg);
+    const rows = db.getEmbeddings(root);
+    if (rows.length === 0)
+        return [];
+    const scored = [];
+    for (const r of rows) {
+        const s = cosineSimilarity(queryVec, r.embedding);
+        if (s >= MIN_EMBEDDING_SCORE)
+            scored.push({ row: r, score: s });
+    }
+    scored.sort((a, b) => b.score - a.score);
+    const hits = [];
+    for (const { row, score } of scored.slice(0, topK)) {
+        let content = "";
+        try {
+            content = existsSync(row.filePath) ? readFileSync(row.filePath, "utf8") : "";
+        }
+        catch {
+            content = "";
+        }
+        if (content.length === 0)
+            continue;
+        const rel = relative(root, row.filePath);
+        hits.push({
+            filePath: row.filePath,
+            title: rel.replace(/\.md$/, ""),
+            content,
+            score: Math.round(score * 10000) / 10000,
+            method: "embedding",
+        });
+    }
+    return hits;
+}
+function searchByTfIdf(cfg, query, topK) {
+    const docs = loadIndex(cfg);
+    const scored = searchTfIdf(docs, query, topK);
+    const root = vaultRoot(cfg);
+    return scored.map((d) => ({
+        filePath: join(root, d.relPath),
+        title: d.title,
+        content: d.raw,
+        score: d.score,
+        method: "tfidf",
+    }));
+}
+export function vaultRoot(cfg) {
+    return join(cfg.vaultPath, cfg.outputDir);
+}
+export function loadIndex(cfg) {
+    const root = vaultRoot(cfg);
+    const files = [];
+    walk(root, files);
+    const docs = [];
+    for (const full of files) {
+        const rel = relative(root, full);
+        const base = rel.split("/").pop() ?? rel;
+        if (SKIP_FILES.has(base))
+            continue;
+        let raw;
+        try {
+            raw = readFileSync(full, "utf8");
+        }
+        catch {
+            continue;
+        }
+        const text = stripMarkdown(raw);
+        const tokens = tokenize(text);
+        const tf = termFrequency(tokens);
+        docs.push({
+            relPath: rel,
+            title: rel.replace(/\.md$/, ""),
+            raw,
+            text,
+            tokens,
+            tf,
+        });
+    }
+    return docs;
+}
+export function searchTfIdf(docs, query, topK = 8) {
+    if (docs.length === 0)
+        return [];
+    const queryTokens = uniq(tokenize(query));
+    if (queryTokens.length === 0)
+        return [];
+    const totalDocs = docs.length;
+    const dfMap = new Map();
+    for (const term of queryTokens) {
+        let df = 0;
+        for (const d of docs)
+            if (d.tf.has(term))
+                df += 1;
+        dfMap.set(term, df);
+    }
+    const scored = [];
+    for (const d of docs) {
+        let score = 0;
+        for (const term of queryTokens) {
+            const tf = d.tf.get(term) ?? 0;
+            if (tf === 0)
+                continue;
+            const df = dfMap.get(term) ?? 0;
+            if (df === 0)
+                continue;
+            const idf = Math.log(totalDocs / df);
+            // Normalize TF by doc length so long docs don't dominate.
+            const tfNorm = tf / Math.max(1, d.tokens.length);
+            score += tfNorm * idf;
+        }
+        if (score > 0) {
+            scored.push({
+                relPath: d.relPath,
+                title: d.title,
+                raw: d.raw,
+                score: Math.round(score * 10000) / 10000,
+            });
+        }
+    }
+    scored.sort((a, b) => b.score - a.score);
+    return scored.slice(0, topK);
+}
+function walk(dir, acc) {
+    let entries;
+    try {
+        entries = readdirSync(dir);
+    }
+    catch {
+        return;
+    }
+    for (const name of entries) {
+        const full = join(dir, name);
+        let st;
+        try {
+            st = statSync(full);
+        }
+        catch {
+            continue;
+        }
+        if (st.isDirectory())
+            walk(full, acc);
+        else if (st.isFile() && name.endsWith(".md"))
+            acc.push(full);
+    }
+}
+export function stripMarkdown(md) {
+    let out = md;
+    // YAML frontmatter
+    out = out.replace(/^---\n[\s\S]*?\n---\n?/, "");
+    // Fenced code blocks
+    out = out.replace(/```[\s\S]*?```/g, " ");
+    // Inline code
+    out = out.replace(/`[^`]*`/g, " ");
+    // Images
+    out = out.replace(/!\[([^\]]*)\]\([^)]+\)/g, "$1");
+    // Markdown links -> link text
+    out = out.replace(/\[([^\]]+)\]\([^)]+\)/g, "$1");
+    // Wikilinks -> inner
+    out = out.replace(/\[\[([^\]]+)\]\]/g, "$1");
+    // Headings, blockquotes, list markers
+    out = out.replace(/^\s{0,3}#{1,6}\s+/gm, "");
+    out = out.replace(/^\s*>\s?/gm, "");
+    out = out.replace(/^\s*[-*+]\s+/gm, "");
+    out = out.replace(/^\s*\d+\.\s+/gm, "");
+    // Emphasis markers
+    out = out.replace(/\*\*([^*]+)\*\*/g, "$1");
+    out = out.replace(/__([^_]+)__/g, "$1");
+    out = out.replace(/\*([^*]+)\*/g, "$1");
+    out = out.replace(/_([^_]+)_/g, "$1");
+    // Horizontal rules
+    out = out.replace(/^\s*[-*_]{3,}\s*$/gm, "");
+    return out;
+}
+export function tokenize(s) {
+    return s
+        .toLowerCase()
+        .split(/\W+/)
+        .filter((t) => t.length >= 3);
+}
+function termFrequency(tokens) {
+    const m = new Map();
+    for (const t of tokens)
+        m.set(t, (m.get(t) ?? 0) + 1);
+    return m;
+}
+function uniq(arr) {
+    return [...new Set(arr)];
+}
+//# sourceMappingURL=retriever.js.map

package/dist/search/retriever.js.map

@@ -0,0 +1 @@
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package/dist/search/synthesizer.js

@@ -0,0 +1,26 @@
+import { buildAnthropicClient, callLLM, normalizeModelName, withRateLimitRetry, } from "../pipeline/distiller.js";
+export async function synthesize(cfg, query, hits) {
+    const notes = hits
+        .map((h) => `### ${h.title} (score: ${h.score})\n${h.content.trim()}`)
+        .join("\n\n---\n\n");
+    const prompt = `You are searching a personal knowledge base of distilled Claude Code session notes. Answer the query directly and concisely using only the provided notes as source.
+
+Query: ${query}
+
+Notes:
+${notes}
+
+Instructions:
+- Answer directly, 3-5 sentences max
+- Quote the specific note title when citing
+- If notes don't contain relevant info, say so clearly
+- Do not invent information not present in the notes`;
+    const client = buildAnthropicClient(cfg);
+    const model = normalizeModelName(cfg.models.distill, cfg.provider);
+    return withRateLimitRetry(() => callLLM(cfg, client, {
+        prompt,
+        model,
+        maxTokens: 600,
+    }));
+}
+//# sourceMappingURL=synthesizer.js.map

package/dist/search/synthesizer.js.map

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