@djmima/pubmed-mcp 1.2.0 → 1.2.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (5) hide show
  1. package/CHANGELOG.md +15 -1
  2. package/README.md +2 -2
  3. package/dist/pubmed/client.js +17 -1
  4. package/dist/pubmed/client.js.map +1 -1
  5. package/package.json +2 -2
package/CHANGELOG.md CHANGED
@@ -5,6 +5,18 @@
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  ## [Unreleased]
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+ ## [1.2.2] - 2026-11-06
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+
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+ ### 変更
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+
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+ - npm パッケージの説明に CLI を加えました。
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+
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+ ## [1.2.1] - 2026-11-05
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+
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+ ### 修正
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+
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+ - `search_articles`（CLI の `pubmed search`）で、NCBI の検索サーバーの障害時に `Cannot read properties of undefined (reading 'length')` で失敗していたのを、NCBI が返したエラーメッセージ（例: `Search is temporarily unavailable`）を返すようにしました。NCBI は障害時に HTTP 200 で ID の一覧のない応答を返すことがあり、これを検索結果として扱っていました。
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+
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  ## [1.2.0] - 2026-11-04
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  ### 追加
@@ -59,7 +71,9 @@ npm パッケージ [`@djmima/pubmed-mcp`](https://www.npmjs.com/package/@djmima
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  - 同じツールをシェルから実行する `pubmed` CLI と、エージェント向けの Skill（`skills/pubmed-cli`）
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  - MIT License
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- [Unreleased]: https://github.com/DJMIMA/PubMed_MCP/compare/v1.2.0...HEAD
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+ [Unreleased]: https://github.com/DJMIMA/PubMed_MCP/compare/v1.2.2...HEAD
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+ [1.2.2]: https://github.com/DJMIMA/PubMed_MCP/compare/v1.2.1...v1.2.2
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+ [1.2.1]: https://github.com/DJMIMA/PubMed_MCP/compare/v1.2.0...v1.2.1
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  [1.2.0]: https://github.com/DJMIMA/PubMed_MCP/compare/v1.1.0...v1.2.0
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  [1.1.0]: https://github.com/DJMIMA/PubMed_MCP/compare/v1.0.2...v1.1.0
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  [1.0.2]: https://github.com/DJMIMA/PubMed_MCP/compare/v1.0.1...v1.0.2
package/README.md CHANGED
@@ -1,4 +1,4 @@
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- <h1 align="center">PubMed MCP</h1>
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+ <h1 align="center">PubMed MCP/CLI</h1>
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  <p align="center"><strong>Search and read the biomedical literature from your AI assistant.</strong></p>
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@@ -23,7 +23,7 @@
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  <p align="center"><strong>English</strong> · <a href="README_ja.md">日本語</a></p>
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- **Free, open source, and runs on your own machine.** An [MCP (Model Context Protocol)](https://modelcontextprotocol.io/) server that gives Claude and other LLM clients structured access to [PubMed](https://pubmed.ncbi.nlm.nih.gov/) and [PubMed Central (PMC)](https://www.ncbi.nlm.nih.gov/pmc/) via the NCBI E-utilities API. No account needed; an NCBI API key is optional.
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+ **Free, open source, and runs on your own machine.** An [MCP (Model Context Protocol)](https://modelcontextprotocol.io/) server and command-line tool that give Claude, Codex, and other LLM clients structured access to [PubMed](https://pubmed.ncbi.nlm.nih.gov/) and [PubMed Central (PMC)](https://www.ncbi.nlm.nih.gov/pmc/) via the NCBI E-utilities API. No account needed; an NCBI API key is optional.
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  ## Tools
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package/dist/pubmed/client.js CHANGED
@@ -157,7 +157,7 @@ export class NcbiClient {
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  ...(params.maxdate ? { maxdate: params.maxdate } : {}),
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  },
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  }));
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- return response.data.esearchresult;
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+ return parseEsearchResult(response.data, this.apiKey);
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  }
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  /**
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  * EFetch — retrieve full records from PubMed or PMC.
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  return err;
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  return new Error(`Unknown error during NCBI ${operation}`);
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  }
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+ /**
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+ * Pull esearchresult out of an ESearch response. When its search backend
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+ * fails, NCBI can answer HTTP 200 with only `esearchresult.ERROR` and no
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+ * idlist; report that message instead of returning a result without IDs.
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+ */
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+ function parseEsearchResult(data, apiKey) {
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+ const result = data
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+ ?.esearchresult;
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+ if (typeof result?.ERROR === 'string' && result.ERROR) {
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+ throw new NcbiApiError(`NCBI esearch returned an error: ${redactApiKey(result.ERROR, apiKey)}`);
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+ }
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+ if (!Array.isArray(result?.idlist)) {
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+ throw new NcbiParseError(`NCBI esearch response has no idlist: ${redactApiKey(describeResponseBody(data), apiKey)}`);
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+ }
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+ return result;
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+ }
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  const MAX_ERROR_BODY_LENGTH = 300;
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  /** Render an error response body (JSON object, string, or buffer) as readable text. */
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  function describeResponseBody(data) {
package/dist/pubmed/client.js.map CHANGED
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package/package.json CHANGED
@@ -1,7 +1,7 @@
1
1
  {
2
2
  "name": "@djmima/pubmed-mcp",
3
- "version": "1.2.0",
4
- "description": "MCP server providing access to PubMed biomedical literature and citations",
3
+ "version": "1.2.2",
4
+ "description": "MCP server and CLI for searching and reading PubMed and PubMed Central literature",
5
5
  "license": "MIT",
6
6
  "author": "DJ MIMA",
7
7
  "repository": {