@disclosureos/observables 2.0.0-beta.3 → 2.0.0-beta.4
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/CHANGELOG.md +16 -0
- package/README.md +71 -30
- package/dist/assessment/index.d.ts +3 -3
- package/dist/assessment/index.js +243 -286
- package/dist/assessment/index.js.map +1 -1
- package/dist/biologics/index.d.ts +2 -2
- package/dist/biologics/index.js +127 -151
- package/dist/biologics/index.js.map +1 -1
- package/dist/constants/index.d.ts +17 -17
- package/dist/constants/index.js +243 -286
- package/dist/constants/index.js.map +1 -1
- package/dist/factories/index.d.ts +1 -1
- package/dist/factories/index.js +7 -7
- package/dist/factories/index.js.map +1 -1
- package/dist/formatters/index.d.ts +3 -3
- package/dist/formatters/index.js +243 -286
- package/dist/formatters/index.js.map +1 -1
- package/dist/guards/index.d.ts +4 -4
- package/dist/guards/index.js +20 -20
- package/dist/guards/index.js.map +1 -1
- package/dist/index.d.ts +15 -5
- package/dist/index.js +289 -288
- package/dist/index.js.map +1 -1
- package/dist/labels/index.d.ts +3 -3
- package/dist/labels/index.js +223 -266
- package/dist/labels/index.js.map +1 -1
- package/dist/technology/index.d.ts +2 -2
- package/dist/technology/index.js +123 -142
- package/dist/technology/index.js.map +1 -1
- package/dist/{types-DsfVlej0.d.ts → types-DNk7V-A1.d.ts} +18 -18
- package/dist/{types-p_0pgxkz.d.ts → types-Dh1p5iPn.d.ts} +18 -18
- package/dist/{types-gDm-dEvQ.d.ts → types-Dx0yl1dG.d.ts} +1 -1
- package/package.json +3 -3
- package/schema/observables.schema.json +16 -16
package/dist/constants/index.js
CHANGED
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@@ -2,21 +2,21 @@ import { z } from 'zod';
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import { ClaimSchema, ConfidenceSchema } from '@disclosureos/records/shared';
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// src/constants/index.ts
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var AssessmentLevelSchema = z.enum(["not_indicated", "reported", "documented", "measured", "confirmed"]).describe("
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var AssessmentLevelSchema = z.enum(["not_indicated", "reported", "documented", "measured", "confirmed"]).describe("Support tier describing the available information about a characteristic. It is separate from a V2 claim outcome and does not establish anomalous behavior.");
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var ObservableCategorySchema = z.enum(["technology", "biologics"]).describe("Top-level observable domain.");
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var ObservableBaseSchema = z.object({
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id: z.string().describe('Stable observable identifier used in data (e.g., "
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code: z.string().describe('Short display code for the observable (e.g., "
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id: z.string().describe('Stable observable identifier used in data (e.g., "abrupt_motion").'),
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code: z.string().describe('Short display code for the observable (e.g., "OC-T02" or "OC-B01").'),
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label: z.string().describe("Human-readable observable name."),
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description: z.string().describe("Plain-language description of what the observable captures."),
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scientificBasis: z.string().describe("
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scientificBasis: z.string().describe("Measurement rationale and limits for investigating this characteristic; not proof of a mechanism or origin."),
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caveat: z.string().optional().describe(
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"
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"Interpretation limits for the characteristic, including contested methods, observation limits and distinctions from causal or origin claims."
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),
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caveatLabel: z.string().optional().describe(
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"Short heading for the caveat banner. The heading describes the specific interpretation limit."
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),
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detectionSignals: z.array(z.string()).describe("
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detectionSignals: z.array(z.string()).describe("Reports or measurements relevant to investigating the characteristic; not sufficient confirmation criteria."),
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methods: z.array(z.string()).describe("Methods or instruments used to detect or evaluate the observable."),
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references: z.array(z.string()).optional().describe("Published or public references supporting the definition.")
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}).meta({ id: "ObservableBase" }).describe("Definition of a single observable: what it is, its scientific basis, and how to detect it.");
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@@ -34,13 +34,13 @@ var ObservableClaimSchema = ObservableAssessmentSchema.omit({
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observableId: true
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}).meta({ id: "ObservableClaim" }).describe("An attributed observable claim, keyed by its map position (no observableId).");
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var TechnologyObservableIdSchema = z.enum([
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"
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"
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"
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"
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"
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"
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]).describe("Identifier of a
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"apparent_hover",
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"abrupt_motion",
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"hypersonic_signature_discrepancy",
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"sensor_detection_discrepancy",
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"apparent_medium_transition",
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"event_associated_biological_changes"
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]).describe("Identifier of a technology-related characteristic in the DisclosureOS vocabulary. No mechanism or origin is established by the category.");
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ObservableBaseSchema.extend({
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id: TechnologyObservableIdSchema,
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references: z.array(z.string())
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@@ -49,12 +49,12 @@ ObservableAssessmentSchema.extend({
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observableId: TechnologyObservableIdSchema
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}).meta({ id: "TechnologyAssessment" }).describe("An assessment of a Technology observable.");
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var BiologicsObservableIdSchema = z.enum([
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"
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"
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"
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"
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"
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"
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"molecular_complexity_pattern",
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"isotope_ratio_departure",
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"molecular_composition_difference",
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"unresolved_sequence_relationship",
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"unresolved_morphological_characteristics",
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"reported_biological_interaction"
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]).describe("Identifier of a Biologics observable.");
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ObservableBaseSchema.extend({
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id: BiologicsObservableIdSchema,
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@@ -66,322 +66,279 @@ ObservableAssessmentSchema.extend({
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// src/technology/constants.ts
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var TECHNOLOGY_OBSERVABLES = {
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id: "
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code: "
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label: "
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description: "
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scientificBasis: "
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detectionSignals: [
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"
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"
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"
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"Object mass inconsistent with buoyant lift",
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"Silent operation during hover"
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"apparent_hover": {
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"id": "apparent_hover",
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"code": "OC-T01",
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"label": "Apparent Hover",
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"description": "An object appears to remain within a limited region above a surface for a stated interval, while the available observations do not identify its means of support. This term records the support question; it does not identify a propulsion mechanism.",
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"scientificBasis": "Assess support using position relative to a declared reference frame, duration, environmental conditions and the available observations of possible lift or suspension. Failure to resolve a support mechanism is an observation limit, not a violation of mechanics.",
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"detectionSignals": [
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"An account describes an object remaining above a surface without an identified means of support.",
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"A timed sequence indicates limited displacement in a stated reference frame.",
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"Recorded views or sensor channels do not resolve particular support features within stated limits."
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],
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methods: [
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"
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"Acoustic monitoring for propulsion noise",
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"Witness triangulation for altitude confirmation"
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"methods": [
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"Retain the original account, time interval and observer position.",
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"Estimate position and motion with calibrated geometry; distinguish station keeping from apparent stillness caused by viewing geometry.",
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"Compare visible, thermal, acoustic or other available observations with the specific support mechanisms being tested, recording coverage and sensitivity."
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],
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"caveat": "Not seeing wings, exhaust or downwash does not show that they were absent. Distance, resolution, wind, buoyancy, tethering, viewing geometry and platform motion require consideration. A Doppler radial-velocity measurement alone does not establish three-dimensional station keeping.",
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"caveatLabel": "Unidentified support is not anti-gravity",
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"references": [
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"https://www.nasa.gov/wp-content/uploads/2023/09/uap-independent-study-team-final-report-0.pdf"
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]
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},
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id: "
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code: "
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label: "
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description: "
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scientificBasis: "
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detectionSignals: [
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"Immediate reversal of travel direction",
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"No observed structural deformation during maneuver"
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"abrupt_motion": {
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"id": "abrupt_motion",
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"code": "OC-T02",
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"label": "Abrupt Motion",
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"description": "An apparent or measured rapid change in motion, including a change in direction, speed or angular position. Any claim about physical acceleration must identify the quantity estimated and the observations used.",
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"scientificBasis": "Angular motion, radial velocity and three-dimensional motion are different quantities. Physical acceleration estimates depend on geometry, timing, reference-frame motion and the analysis method; uncertainty and a stated comparison are needed to assess whether a result is unusual.",
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"detectionSignals": [
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"An account describes sudden departure, stopping, reversal or a sharp turn.",
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"A recorded angular position or other measured motion quantity changes over a short interval.",
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"An analysis estimates a physical acceleration with declared assumptions and uncertainty."
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],
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methods: [
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"Satellite track data for independent velocity confirmation",
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"Accelerometer data from nearby sensor platforms"
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"methods": [
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"Preserve timestamps, exposure duration, frame cadence and any missing intervals.",
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"Estimate angular motion separately from physical motion and document range information or constraints.",
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"Account for sensor/platform motion, tracking changes and processing before comparing derived accelerations with a stated reference."
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],
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"caveat": "A discontinuity in a track is not an instantaneous physical maneuver. A nearby platform accelerometer measures that platform, not the distant object. No universal acceleration threshold or biological tolerance is implied by this term.",
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"caveatLabel": "Apparent motion is not physical acceleration",
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"references": [
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"https://www.nasa.gov/wp-content/uploads/2023/09/uap-independent-study-team-final-report-0.pdf"
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]
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},
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id: "
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code: "
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label: "Hypersonic
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description: "
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scientificBasis: "
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detectionSignals: [
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"No plasma sheath visible in optical/UV spectrum",
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"No atmospheric disturbance trail"
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"hypersonic_signature_discrepancy": {
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"id": "hypersonic_signature_discrepancy",
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"code": "OC-T03",
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"label": "Hypersonic Motion and Signature Discrepancy",
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"description": "A proposed atmospheric trajectory at approximately Mach 5 or higher relative to the surrounding air, for which one or more specified signatures are reported or measured below an expected level. Retain the declared speed threshold and uncertainty; evaluate the speed estimate and each signature comparison separately.",
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"scientificBasis": "Mach number depends on speed relative to the surrounding air and the local speed of sound. An expected acoustic, thermal, optical or other signature requires a stated model, environment, geometry and observation opportunity. A discrepancy is conditional on those assumptions.",
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"detectionSignals": [
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"A reported or derived speed is described as hypersonic under stated atmospheric conditions.",
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"An observed signature is below a model prediction or detection threshold for a specified interval and channel.",
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"A source reports the absence of a named signature, with observation conditions retained where available."
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],
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methods: [
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"Seismographic stations for shock wave detection",
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"FLIR for thermal signature analysis"
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"methods": [
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"Record speed, reference frame, uncertainty, the declared hypersonic threshold, atmospheric conditions and the sound-speed model.",
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"Record the predicted signature at the observing sensor, including propagation and geometric assumptions.",
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"Compare calibrated observations, background levels and sensitivity with the prediction; retain separate results for each signature."
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],
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"caveat": "No recording, no sensor coverage and a measured non-detection are different states. A ground observer need not detect every atmospheric shock. The term does not require a visible plasma sheath and does not imply unknown physics.",
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"caveatLabel": "Non-detection needs a defined observation opportunity",
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"references": [
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"https://www.nasa.gov/wp-content/uploads/2023/09/uap-independent-study-team-final-report-0.pdf",
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"https://www.grc.nasa.gov/www/BGH/mach.html"
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]
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},
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id: "
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code: "
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label: "
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description: "
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scientificBasis: "
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detectionSignals: [
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"Object visible to one modality but not others",
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"Electronic warfare effects without identifiable source"
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"sensor_detection_discrepancy": {
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"id": "sensor_detection_discrepancy",
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"code": "OC-T04",
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"label": "Sensor Detection Discrepancy",
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"description": "A difference or interruption in detections of a candidate object across times, sensors or observing modes that calls for comparison of the observations and their limits.",
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"scientificBasis": "Detection depends on the signal at the sensor, background, coverage, configuration and processing. Comparing observations requires time alignment and a justified association between candidate detections. A discrepancy alone does not specify its cause.",
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"detectionSignals": [
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"A candidate appears in one channel but has no associated detection in another.",
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"A retained track contains acquisition, interruption or reacquisition intervals.",
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"Detection strength or track behavior differs between instruments or processing settings."
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],
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methods: [
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"Sensor diagnostic logs for malfunction patterns",
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"Signal-to-noise analysis across detection systems"
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"methods": [
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"Compare synchronized source data with fields of view, sensitivity, background and sensor settings.",
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"Retain detection thresholds and raw/processed distinctions, including rejected returns where available.",
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"Review diagnostics and association methods before interpreting an interruption as loss of the same physical object."
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],
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"caveat": "An instrument fault, missing file, occlusion or untested association must not become a finding of stealth, jamming or intentional evasion. Do not infer low radar cross-section from missing track data alone.",
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"caveatLabel": "Detection differences do not establish evasion",
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"references": [
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"https://www.nasa.gov/wp-content/uploads/2023/09/uap-independent-study-team-final-report-0.pdf"
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]
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},
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id: "
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code: "
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label: "
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description: "
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scientificBasis: "
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detectionSignals: [
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"No deceleration during medium transition",
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"Consistent shape/size across media transitions"
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"apparent_medium_transition": {
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"id": "apparent_medium_transition",
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"code": "OC-T05",
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"label": "Apparent Medium Transition",
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"description": "An apparent or measured passage of a candidate object between media or across a declared environmental regime boundary, such as an air-water interface or a specified atmospheric-to-space boundary. Identify the conditions on each side, the boundary used and the continuity of the candidate.",
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"scientificBasis": "A transition claim depends on positions relative to the boundary and on whether observations before and after it refer to the same object. Motion, shape and interface effects are separate quantities to compare; their absence is not built into this term.",
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"detectionSignals": [
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"An account describes entry into or exit from a named medium.",
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"A continuous sequence appears to cross a located interface.",
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"Separate observing systems report candidates on opposite sides of a boundary within a specified time interval."
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],
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methods: [
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"
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"
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"
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186
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"Underwater hydrophone arrays",
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187
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"Satellite IR for ocean surface thermal anomalies"
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169
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"methods": [
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"Record the boundary location, observation geometry and any refraction or obscuration model.",
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"Retain observations through the transition where available; mark gaps and ambiguous associations.",
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"Compare before/after motion and any disturbance against separate stated expectations and detection limits."
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],
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190
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"caveat": "Appearance behind a horizon, into glare or below a resolved waterline is not sufficient to establish entry into water. Atmospheric-to-space travel has no single material surface: name the altitude or regime criterion when using that context. This term does not assert unchanged speed or absence of a splash.",
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"caveatLabel": "A transition requires continuity and a located boundary",
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"references": [
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"https://www.nasa.gov/wp-content/uploads/2023/09/uap-independent-study-team-final-report-0.pdf"
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]
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},
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id: "
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code: "
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label: "Biological
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description: "
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scientificBasis: "
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detectionSignals: [
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"Cellular or DNA damage documented in medical records",
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"Multiple witnesses reporting similar physiological effects",
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"Vegetation damage patterns around landing sites"
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"event_associated_biological_changes": {
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"id": "event_associated_biological_changes",
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"code": "OC-T06",
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"label": "Biological Changes Around an Event",
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"description": "Reported symptoms or measured biological changes in a person, animal, plant or other organism in the context of an investigated event. Timing and any proposed exposure are recorded separately from a claim that the event caused the change.",
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"scientificBasis": "Description of a symptom, clinical finding or environmental change is distinct from diagnosis and causal attribution. Assessments of an association require timelines, relevant baselines, potential exposures and consideration of alternative causes.",
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186
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"detectionSignals": [
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"An account reports symptoms during or after an event.",
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"A clinical or laboratory record documents a finding and its examination time.",
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"A survey describes a change in vegetation or other organisms with a stated comparison."
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],
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methods: [
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"
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"
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"
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"Vegetation and soil sample analysis",
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"Geiger counter readings at encounter locations",
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214
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"Long-term medical follow-up of exposed individuals"
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191
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"methods": [
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192
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"Retain the original account and distinguish event time, symptom onset, examination time and reporting time.",
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"Link authorized clinical or laboratory findings to their methods, reference ranges and uncertainty where applicable.",
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194
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"Record exposure measurements and comparison observations separately; evaluate causal explanations in attributed claims."
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195
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],
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216
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217
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218
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196
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"caveat": "An injury description does not identify radiation or another exposure mechanism. A later site reading does not reconstruct a past dose by itself. This category is not a clinical diagnosis or a basis for treatment advice.",
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197
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"caveatLabel": "Timing does not establish causation",
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198
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"references": [
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"https://www.cdc.gov/field-epi-manual/php/chapters/analyze-interpret-data.html"
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]
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}
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};
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// src/biologics/constants.ts
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var BIOLOGICS_OBSERVABLES = {
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id: "
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code: "
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label: "Molecular Complexity
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description: "
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scientificBasis: "
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232
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233
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"
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"
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235
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"Ordered molecular arrangements exceeding thermodynamic equilibrium expectations",
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236
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"Functional molecular machines or self-assembling structures",
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"Polymeric molecules with non-random sequence information"
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"molecular_complexity_pattern": {
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"id": "molecular_complexity_pattern",
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"code": "OC-B01",
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"label": "Molecular Complexity Pattern",
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"description": "A measured or estimated molecular complexity and abundance pattern evaluated against a stated chemical comparison. The metric, estimation method and comparison conditions form part of the result.",
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211
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"scientificBasis": "Molecular assembly is one research approach to complexity and potential biosignatures. Its calculated index and experimentally estimated values depend on declared methods and assumptions. Interpretation as life, selection or engineering is a separate claim.",
|
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212
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"detectionSignals": [
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213
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"A molecular structure receives a complexity value under a named algorithm.",
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"Spectral data support a method-specific estimate of molecular complexity.",
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"The distribution or abundance of identified molecules differs from a stated control or model."
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],
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methods: [
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"
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"
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"
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"High-resolution mass spectrometry for molecular formula determination",
|
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244
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"Computational assembly pathway analysis"
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217
|
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"methods": [
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218
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"Retain raw spectra, preprocessing, molecule/ion selection and calibration data.",
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219
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"Identify the complexity algorithm, software revision, uncertainty or bounds, and whether the value is calculated or inferred from spectra.",
|
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220
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"Use blanks, reference compounds and relevant abiotic, biological or synthetic comparisons; report abundance and detection limits separately."
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221
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],
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246
|
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247
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248
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222
|
+
"caveat": "Assembly-theory biosignature interpretations are contested. A fixed assembly-index threshold is not a universal proof of life or technology. An index does not measure the actual historical synthesis pathway, and a proposed biosignature does not establish non-terrestrial origin.",
|
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223
|
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"caveatLabel": "Research metric; origin and life not established",
|
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224
|
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"references": [
|
|
225
|
+
"https://www.nature.com/articles/s41467-021-23258-x",
|
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226
|
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"https://www.nature.com/articles/s41540-024-00403-y",
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|
+
"https://science.nasa.gov/astrobiology/researchers/life-detection-resources/ladder-of-life-detection/"
|
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|
]
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|
},
|
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251
|
-
|
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252
|
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id: "
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|
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code: "
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|
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label: "
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|
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description: "
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|
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scientificBasis: "Isotope
|
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|
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detectionSignals: [
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258
|
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"
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259
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"
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260
|
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"
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261
|
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"Noble gas isotope compositions outside solar wind or planetary ranges",
|
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262
|
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"Multi-element isotopic anomalies correlating across sample"
|
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|
+
"isotope_ratio_departure": {
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231
|
+
"id": "isotope_ratio_departure",
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|
+
"code": "OC-B02",
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233
|
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"label": "Isotope Ratio Departure",
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234
|
+
"description": "An isotope ratio or pattern that differs from an explicitly identified reference material, population or model under a stated measurement and comparison method.",
|
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235
|
+
"scientificBasis": "Isotope comparisons require a defined ratio or delta scale, calibration, sample preparation, uncertainty and relevant reference values. A departure from a selected reference is a result to explain, not an origin assignment.",
|
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236
|
+
"detectionSignals": [
|
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237
|
+
"A measured isotope ratio differs from a named reference beyond a declared comparison criterion.",
|
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238
|
+
"An isotopic pattern varies across portions or phases of a sample.",
|
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|
+
"Independent measurements reproduce a stated departure within their uncertainty."
|
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240
|
],
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|
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methods: [
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|
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"
|
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|
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"
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|
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"
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|
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"Noble gas mass spectrometry",
|
|
269
|
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"Accelerator mass spectrometry (AMS) for rare isotopes"
|
|
241
|
+
"methods": [
|
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242
|
+
"Identify the specimen and preparation history, isotope ratios, units or delta scales, and reference materials.",
|
|
243
|
+
"Report blanks, correction methods, interference checks, mass-bias treatment and uncertainty.",
|
|
244
|
+
"Compare replicated results and relevant natural, industrial or laboratory alternatives before evaluating provenance claims."
|
|
270
245
|
],
|
|
271
|
-
|
|
272
|
-
|
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273
|
-
|
|
246
|
+
"caveat": "An unusual ratio is not by itself a non-terrestrial, biological or technological signature. Reference selection, fractionation, mixing, contamination and processing can change an interpretation. This material-analysis term does not establish that the sample is biological.",
|
|
247
|
+
"caveatLabel": "A reference departure is not an origin",
|
|
248
|
+
"references": [
|
|
249
|
+
"https://www.nist.gov/publications/value-assignment-and-uncertainty-estimation-selected-light-stable-isotope-reference",
|
|
250
|
+
"https://science.nasa.gov/astrobiology/researchers/life-detection-resources/ladder-of-life-detection/"
|
|
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|
]
|
|
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|
},
|
|
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|
-
|
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|
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id: "
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|
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|
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code: "
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|
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label: "
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|
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description: "
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|
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scientificBasis: "
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282
|
-
detectionSignals: [
|
|
283
|
-
"
|
|
284
|
-
"
|
|
285
|
-
"
|
|
286
|
-
"Silicon-carbon hybrid molecular scaffolds",
|
|
287
|
-
"Metabolic products inconsistent with known biochemical pathways",
|
|
288
|
-
"Information-carrying polymers with non-ACGT/U encoding"
|
|
253
|
+
"molecular_composition_difference": {
|
|
254
|
+
"id": "molecular_composition_difference",
|
|
255
|
+
"code": "OC-B03",
|
|
256
|
+
"label": "Molecular Composition Difference",
|
|
257
|
+
"description": "A molecular structure, composition or chemical behavior that differs from a specified biochemical reference. The observation can concern a material whose biological status is unresolved.",
|
|
258
|
+
"scientificBasis": "Structural and chemical measurements can support comparisons without establishing that a material is living. Alternative molecular systems can also be synthesized, so unfamiliar chemistry alone does not identify a biological or non-terrestrial source.",
|
|
259
|
+
"detectionSignals": [
|
|
260
|
+
"Structural analysis identifies a polymer backbone, building block or molecular arrangement outside the stated comparison.",
|
|
261
|
+
"Measured chirality or composition differs from a specified reference sample or range.",
|
|
262
|
+
"A reproducible chemical behavior is not explained by the declared reference model."
|
|
289
263
|
],
|
|
290
|
-
methods: [
|
|
291
|
-
"
|
|
292
|
-
"
|
|
293
|
-
"
|
|
294
|
-
"Nucleotide sequencing attempts with universal and degenerate primers",
|
|
295
|
-
"Elemental analysis (CHNS/O) for bulk composition",
|
|
296
|
-
"Raman spectroscopy for molecular bond identification"
|
|
264
|
+
"methods": [
|
|
265
|
+
"Use complementary structural or compositional measurements appropriate to the material and retain identification confidence.",
|
|
266
|
+
"Record preparation, blanks, reference compounds and contamination controls.",
|
|
267
|
+
"Test claims of biological function separately from chemical identity; document assay scope and failures without turning them into absence findings."
|
|
297
268
|
],
|
|
298
|
-
|
|
299
|
-
|
|
300
|
-
|
|
269
|
+
"caveat": "Failure of a DNA amplification or sequencing protocol does not establish alternative genetics. Bulk elemental composition does not establish a molecular scaffold. The comparison must allow known biochemical diversity and synthetic chemistry; no four-base or twenty-amino-acid rule is universal proof of origin.",
|
|
270
|
+
"caveatLabel": "Unfamiliar chemistry does not establish biology",
|
|
271
|
+
"references": [
|
|
272
|
+
"https://pubmed.ncbi.nlm.nih.gov/30792304/",
|
|
273
|
+
"https://science.nasa.gov/astrobiology/researchers/life-detection-resources/ladder-of-life-detection/"
|
|
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274
|
]
|
|
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275
|
},
|
|
303
|
-
|
|
304
|
-
id: "
|
|
305
|
-
code: "
|
|
306
|
-
label: "
|
|
307
|
-
description: "
|
|
308
|
-
scientificBasis: "
|
|
309
|
-
detectionSignals: [
|
|
310
|
-
"
|
|
311
|
-
"
|
|
312
|
-
"
|
|
313
|
-
"Genetic regulatory systems without terrestrial analogs",
|
|
314
|
-
"Absence of conserved genes universal to all terrestrial life (e.g., ribosomal RNA)"
|
|
276
|
+
"unresolved_sequence_relationship": {
|
|
277
|
+
"id": "unresolved_sequence_relationship",
|
|
278
|
+
"code": "OC-B04",
|
|
279
|
+
"label": "Unresolved Sequence Relationship",
|
|
280
|
+
"description": "A retained nucleic-acid or protein sequence for which a specified search or phylogenetic analysis does not establish a relationship within its declared reference set and acceptance criteria.",
|
|
281
|
+
"scientificBasis": "Sequence matching is conditional on data quality, database contents and analysis settings. An unresolved relationship is a bounded search result. It does not establish that a sequence is outside terrestrial biology or has an independent evolutionary origin.",
|
|
282
|
+
"detectionSignals": [
|
|
283
|
+
"A quality-reviewed sequence has no reported match meeting a declared threshold.",
|
|
284
|
+
"Alternative analyses yield conflicting placements for the same retained sequence.",
|
|
285
|
+
"Available marker coverage is insufficient for a stated taxonomic or phylogenetic assignment."
|
|
315
286
|
],
|
|
316
|
-
methods: [
|
|
317
|
-
"
|
|
318
|
-
"
|
|
319
|
-
"
|
|
320
|
-
"Ribosomal RNA gene surveys (16S/18S/ITS)",
|
|
321
|
-
"Comparative genomics for conserved gene detection",
|
|
322
|
-
"De novo assembly and annotation"
|
|
287
|
+
"methods": [
|
|
288
|
+
"Retain reads, quality measures, assembly provenance, extraction blanks and contamination checks.",
|
|
289
|
+
"Name the database snapshot, software revision, filters, masking, scoring and acceptance thresholds.",
|
|
290
|
+
"Report alignment coverage and alternative results; distinguish database similarity searches from phylogenetic inference and repeat against suitable comparison sets."
|
|
323
291
|
],
|
|
324
|
-
|
|
325
|
-
|
|
326
|
-
|
|
292
|
+
"caveat": "No BLAST match is not zero homology to all life. Short, damaged, contaminated or misassembled sequences and limited database coverage can leave a result unresolved. Non-DNA/RNA chemistry belongs in a separate molecular-characterization entry unless an applicable sequence representation is defined.",
|
|
293
|
+
"caveatLabel": "A limited search is not exclusion from the tree of life",
|
|
294
|
+
"references": [
|
|
295
|
+
"https://blast.ncbi.nlm.nih.gov/doc/blast-help/FAQ.html",
|
|
296
|
+
"https://blast.ncbi.nlm.nih.gov/doc/blast-topics/blastsearchparams.html",
|
|
297
|
+
"https://link.springer.com/article/10.1186/s12915-014-0087-z"
|
|
327
298
|
]
|
|
328
299
|
},
|
|
329
|
-
|
|
330
|
-
id: "
|
|
331
|
-
code: "
|
|
332
|
-
label: "
|
|
333
|
-
description: "
|
|
334
|
-
scientificBasis: "
|
|
335
|
-
detectionSignals: [
|
|
336
|
-
"
|
|
337
|
-
"
|
|
338
|
-
"
|
|
339
|
-
"Symmetry patterns not observed in terrestrial organisms",
|
|
340
|
-
"Tissue organization incompatible with known developmental pathways",
|
|
341
|
-
"Biomechanical properties outside known biological material ranges"
|
|
300
|
+
"unresolved_morphological_characteristics": {
|
|
301
|
+
"id": "unresolved_morphological_characteristics",
|
|
302
|
+
"code": "OC-B05",
|
|
303
|
+
"label": "Unresolved Morphological Characteristics",
|
|
304
|
+
"description": "Observed form or internal structure that has not been assigned within a stated anatomical, cellular or other morphological comparison. Record the features and comparison separately from any identification of the specimen.",
|
|
305
|
+
"scientificBasis": "Morphological examination characterizes structures at a stated scale and resolution. Classification also depends on specimen condition, preparation, comparison coverage and independent observations. Unfamiliar form alone does not establish biological status or evolutionary origin.",
|
|
306
|
+
"detectionSignals": [
|
|
307
|
+
"An examination describes a feature absent from the declared comparison material.",
|
|
308
|
+
"Imaging methods or examiners produce unresolved differences in structural identification.",
|
|
309
|
+
"Available specimen condition or image resolution prevents a proposed identification."
|
|
342
310
|
],
|
|
343
|
-
methods: [
|
|
344
|
-
"
|
|
345
|
-
"
|
|
346
|
-
"
|
|
347
|
-
"Developmental biology analysis (if living specimen)",
|
|
348
|
-
"Biomechanical testing of tissue properties",
|
|
349
|
-
"Phylogenetic morphological matrix analysis"
|
|
311
|
+
"methods": [
|
|
312
|
+
"Retain specimen provenance, scale, orientation, preparation and original images.",
|
|
313
|
+
"Describe visible features before assigning taxonomic or functional labels.",
|
|
314
|
+
"Compare appropriate reference specimens and complementary imaging or composition analyses; document preservation artifacts and alternative reconstructions."
|
|
350
315
|
],
|
|
351
|
-
|
|
352
|
-
|
|
353
|
-
|
|
316
|
+
"caveat": "Appearance alone can be affected by preservation, preparation, deformation, assembly or imaging artifacts. A resemblance to cells, organs or a body plan does not by itself establish those structures or an independent lineage.",
|
|
317
|
+
"caveatLabel": "An unresolved form is not a new lineage",
|
|
318
|
+
"references": [
|
|
319
|
+
"https://science.nasa.gov/astrobiology/researchers/life-detection-resources/ladder-of-life-detection/"
|
|
354
320
|
]
|
|
355
321
|
},
|
|
356
|
-
|
|
357
|
-
id: "
|
|
358
|
-
code: "
|
|
359
|
-
label: "
|
|
360
|
-
description: "
|
|
361
|
-
scientificBasis:
|
|
362
|
-
|
|
363
|
-
|
|
364
|
-
|
|
365
|
-
"
|
|
366
|
-
"Evidence of tissue sampling or biological material collection",
|
|
367
|
-
"Behavioral effects suggesting directed influence (paralysis, compulsion)",
|
|
368
|
-
"Communication attempts through biological channels",
|
|
369
|
-
"Surgical-precision physical interactions with biological tissue",
|
|
370
|
-
"Interaction patterns demonstrating knowledge of target biology"
|
|
322
|
+
"reported_biological_interaction": {
|
|
323
|
+
"id": "reported_biological_interaction",
|
|
324
|
+
"code": "OC-B06",
|
|
325
|
+
"label": "Reported Biological Interaction",
|
|
326
|
+
"description": "An attributed account or documented observation of apparent contact, communication or directed action involving a person, animal or other organism during an investigated event. Retain the reported action separately from findings about an agent, intent or cause.",
|
|
327
|
+
"scientificBasis": "Testimony can establish what a source reported. Recordings, physical traces and clinical or veterinary findings can address specific parts of that account through their own methods. Similarity between reports or temporal association alone does not establish a shared agent or mechanism.",
|
|
328
|
+
"detectionSignals": [
|
|
329
|
+
"A source describes apparent contact, communication, restraint or directed behavior.",
|
|
330
|
+
"A recording documents a specified interaction for later interpretation.",
|
|
331
|
+
"An examination records a physical finding alleged to be related to an interaction, with the attribution preserved."
|
|
371
332
|
],
|
|
372
|
-
methods: [
|
|
373
|
-
"
|
|
374
|
-
"
|
|
375
|
-
"
|
|
376
|
-
"Toxicological screening for unknown compounds",
|
|
377
|
-
"Neurological assessment for anomalous effects",
|
|
378
|
-
"Comparative analysis across multiple experiencer reports"
|
|
333
|
+
"methods": [
|
|
334
|
+
"Retain original wording, interview context, chronology and account revisions, including how the account was elicited.",
|
|
335
|
+
"Link independently collected recordings or physical findings to precise source passages without treating all parts of the account as corroborated.",
|
|
336
|
+
"Evaluate physical traces with appropriate forensic, clinical or veterinary methods and record alternative explanations; keep any agency assessment separate."
|
|
379
337
|
],
|
|
380
|
-
|
|
381
|
-
|
|
382
|
-
|
|
383
|
-
|
|
384
|
-
'Kelleher & Knapp, "Hunt for the Skinwalker," Paraview Pocket Books, 2005'
|
|
338
|
+
"caveat": "This category includes testimony whose external circumstances are unresolved. It does not confirm an abduction, communication, intervention, intelligence or intent. A medical or psychological assessment is not a truth detector; an unexplained injury or animal tissue change does not by itself identify a responsible agent.",
|
|
339
|
+
"caveatLabel": "Reported interaction; agency not established",
|
|
340
|
+
"references": [
|
|
341
|
+
"https://www.cdc.gov/field-epi-manual/php/chapters/analyze-interpret-data.html"
|
|
385
342
|
]
|
|
386
343
|
}
|
|
387
344
|
};
|