@devflow-tools/cli 0.17.8 → 0.18.1

package/LICENSE

@@ -0,0 +1,21 @@
+MIT License
+
+Copyright (c) 2026 shilongfeicool
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

package/dist/commands/context.d.ts

@@ -1,4 +1,4 @@
-import type { GetProjectContextResult } from "@devflow-tools/sdk";
+import { type GetProjectContextResult } from "@devflow-tools/sdk";
 export interface ContextOptions {
     query: string;
     mode?: "fast" | "deep";

package/dist/commands/context.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"context.d.ts","sourceRoot":"","sources":["../../src/commands/context.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,uBAAuB,EAAE,MAAM,oBAAoB,CAAC;AAElE,MAAM,WAAW,cAAc;IAC7B,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,MAAM,GAAG,MAAM,CAAC;IACvB,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,UAAU,CAAC,EAAE,OAAO,CAAC;CACtB;AAED,MAAM,WAAW,aAAa;IAC5B,KAAK,EAAE,OAAO,EAAE,CAAC;IACjB,UAAU,EAAE,MAAM,CAAC;IACnB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,wBAAsB,UAAU,CAAC,OAAO,EAAE,cAAc,GAAG,OAAO,CAAC,aAAa,CAAC,CAchF;AAED,wBAAsB,cAAc,CAAC,OAAO,EAAE,cAAc,GAAG,OAAO,CAAC,uBAAuB,CAAC,CAiB9F"}
+{"version":3,"file":"context.d.ts","sourceRoot":"","sources":["../../src/commands/context.ts"],"names":[],"mappings":"AAGA,OAAO,EAAqB,KAAK,uBAAuB,EAAE,MAAM,oBAAoB,CAAC;AAErF,MAAM,WAAW,cAAc;IAC7B,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,MAAM,GAAG,MAAM,CAAC;IACvB,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,UAAU,CAAC,EAAE,OAAO,CAAC;CACtB;AAED,MAAM,WAAW,aAAa;IAC5B,KAAK,EAAE,OAAO,EAAE,CAAC;IACjB,UAAU,EAAE,MAAM,CAAC;IACnB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,wBAAsB,UAAU,CAAC,OAAO,EAAE,cAAc,GAAG,OAAO,CAAC,aAAa,CAAC,CAchF;AAED,wBAAsB,cAAc,CAAC,OAAO,EAAE,cAAc,GAAG,OAAO,CAAC,uBAAuB,CAAC,CAqB9F"}

package/dist/commands/context.js

@@ -1,5 +1,7 @@
 import { withServer } from "../lib/with-server.js";
-import { createEngines, getProjectContextResult } from "@devflow-tools/context-engine";
+import { createEngines } from '@devflow-tools/mcp-server/composition';
+import { projectDiagnosticCodeResult } from '@devflow-tools/mcp-server/retrieval';
+import { stableRuntimeHash } from "@devflow-tools/sdk";
 export async function getContext(options) {
     return withServer(process.cwd(), (client) => client.buildContext(options.query, options.mode ?? "fast", options.maxTokens), async () => {
         const { context } = await createEngines(process.cwd());
@@ -20,7 +22,11 @@ export async function getTaskContext(options) {
         const { context, codegraph } = await createEngines(rootPath);
         const lastUpdated = codegraph.getStats().lastUpdated;
         const freshnessMs = lastUpdated > 0 ? Date.now() - lastUpdated : 0;
-        return getProjectContextResult(context, { query: options.query, ...taskOptions }, freshnessMs);
+        const diagnosticId = `diagnostic:${stableRuntimeHash({ rootPath, query: options.query, taskOptions })}`;
+        return projectDiagnosticCodeResult(await context.buildTaskContext(options.query, taskOptions), freshnessMs, {
+            projectRoot: rootPath, query: options.query, host: 'cli',
+            sessionId: diagnosticId, executionId: diagnosticId, requestId: diagnosticId, turnId: diagnosticId,
+        });
     }, { skipServer: options.skipServer });
 }
 //# sourceMappingURL=context.js.map

package/dist/commands/context.js.map

@@ -1 +1 @@
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+{"version":3,"file":"context.js","sourceRoot":"","sources":["../../src/commands/context.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAA0B,MAAM,uBAAuB,CAAC;AAC3E,OAAO,EAAE,aAAa,EAAE,MAAM,uCAAuC,CAAC;AACtE,OAAO,EAAE,2BAA2B,EAAE,MAAM,qCAAqC,CAAC;AAClF,OAAO,EAAE,iBAAiB,EAAgC,MAAM,oBAAoB,CAAC;AAerF,MAAM,CAAC,KAAK,UAAU,UAAU,CAAC,OAAuB;IACtD,OAAO,UAAU,CACf,OAAO,CAAC,GAAG,EAAE,EACb,CAAC,MAAM,EAAE,EAAE,CAAC,MAAM,CAAC,YAAY,CAAC,OAAO,CAAC,KAAK,EAAE,OAAO,CAAC,IAAI,IAAI,MAAM,EAAE,OAAO,CAAC,SAAS,CAAC,EACzF,KAAK,IAAI,EAAE;QACT,MAAM,EAAE,OAAO,EAAE,GAAG,MAAM,aAAa,CAAC,OAAO,CAAC,GAAG,EAAE,CAAC,CAAC;QACvD,OAAO,OAAO,CAAC,KAAK,CAAC;YACnB,KAAK,EAAE,OAAO,CAAC,KAAK;YACpB,IAAI,EAAE,OAAO,CAAC,IAAI,IAAI,MAAM;YAC5B,SAAS,EAAE,OAAO,CAAC,SAAS,IAAI,IAAI;SACrC,CAAC,CAAC;IACL,CAAC,EACD,EAAE,UAAU,EAAE,OAAO,CAAC,UAAU,EAAE,CACnC,CAAC;AACJ,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,cAAc,CAAC,OAAuB;IAC1D,MAAM,QAAQ,GAAG,OAAO,CAAC,GAAG,EAAE,CAAC;IAC/B,MAAM,WAAW,GAAG;QAClB,IAAI,EAAE,OAAO,CAAC,IAAI,IAAI,MAAM;QAC5B,SAAS,EAAE,OAAO,CAAC,SAAS,IAAI,IAAI;KACrC,CAAC;IACF,OAAO,UAAU,CACf,QAAQ,EACR,CAAC,MAAM,EAAE,EAAE,CAAC,MAAM,CAAC,gBAAgB,CAAC,OAAO,CAAC,KAAK,EAAE,QAAQ,EAAE,WAAW,CAAC,EACzE,KAAK,IAAI,EAAE;QACT,MAAM,EAAE,OAAO,EAAE,SAAS,EAAE,GAAG,MAAM,aAAa,CAAC,QAAQ,CAAC,CAAC;QAC7D,MAAM,WAAW,GAAG,SAAS,CAAC,QAAQ,EAAE,CAAC,WAAW,CAAC;QACrD,MAAM,WAAW,GAAG,WAAW,GAAG,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,EAAE,GAAG,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC;QACnE,MAAM,YAAY,GAAG,cAAc,iBAAiB,CAAC,EAAE,QAAQ,EAAE,KAAK,EAAE,OAAO,CAAC,KAAK,EAAE,WAAW,EAAE,CAAC,EAAE,CAAC;QACxG,OAAO,2BAA2B,CAAC,MAAM,OAAO,CAAC,gBAAgB,CAAC,OAAO,CAAC,KAAK,EAAE,WAAW,CAAC,EAAE,WAAW,EAAE;YAC1G,WAAW,EAAE,QAAQ,EAAE,KAAK,EAAE,OAAO,CAAC,KAAK,EAAE,IAAI,EAAE,KAAK;YACxD,SAAS,EAAE,YAAY,EAAE,WAAW,EAAE,YAAY,EAAE,SAAS,EAAE,YAAY,EAAE,MAAM,EAAE,YAAY;SAClG,CAAC,CAAC;IACL,CAAC,EACD,EAAE,UAAU,EAAE,OAAO,CAAC,UAAU,EAAE,CACnC,CAAC;AACJ,CAAC"}

package/dist/commands/db.js

@@ -2,7 +2,7 @@ import { DatabaseSync } from 'node:sqlite';
 import { existsSync, mkdirSync, renameSync, } from 'node:fs';
 import { basename, dirname, join, resolve } from 'node:path';
 import { DevFlowDatabase, getGlobalDevFlowDbPath } from '@devflow-tools/database';
-import { DEVFLOW_SCHEMA_SQL, DEVFLOW_TABLE_NAMES } from '@devflow-tools/sdk';
+import { DEVFLOW_SCHEMA_SQL, DEVFLOW_TABLE_NAMES } from '@devflow-tools/database';
 const OMIT_NUMERIC_PRIMARY_KEY = new Set([
     'run_steps',
     'telemetry_events',

package/dist/commands/db.js.map

@@ -1 +1 @@
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package/dist/commands/docs.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"docs.d.ts","sourceRoot":"","sources":["../../src/commands/docs.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,eAAe,EAAE,MAAM,iCAAiC,CAAC;AAmBlE,wBAAsB,mBAAmB,CAAC,OAAO,EAAE;IACjD,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,YAAY,CAAC,EAAE,OAAO,CAAC;CACxB,GAAG,OAAO,CAAC,OAAO,CAAC,UAAU,CAAC,eAAe,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC,CAa5D;AAED,wBAAsB,wBAAwB,CAAC,OAAO,GAAE;IACtD,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,UAAU,CAAC,EAAE,CAAC,QAAQ,EAAE;QAAE,SAAS,EAAE,MAAM,CAAC;QAAC,SAAS,EAAE,MAAM,CAAC;QAAC,MAAM,CAAC,EAAE,MAAM,CAAA;KAAE,KAAK,IAAI,CAAC;CACvF,GAAG,OAAO,CAAC;IAAE,SAAS,EAAE,MAAM,CAAC;IAAC,SAAS,EAAE,MAAM,CAAA;CAAE,CAAC,CAkCzD"}
+{"version":3,"file":"docs.d.ts","sourceRoot":"","sources":["../../src/commands/docs.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,eAAe,EAAE,MAAM,iCAAiC,CAAC;AAqBlE,wBAAsB,mBAAmB,CAAC,OAAO,EAAE;IACjD,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,YAAY,CAAC,EAAE,OAAO,CAAC;CACxB,GAAG,OAAO,CAAC,OAAO,CAAC,UAAU,CAAC,eAAe,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC,CAa5D;AAED,wBAAsB,wBAAwB,CAAC,OAAO,GAAE;IACtD,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,UAAU,CAAC,EAAE,CAAC,QAAQ,EAAE;QAAE,SAAS,EAAE,MAAM,CAAC;QAAC,SAAS,EAAE,MAAM,CAAC;QAAC,MAAM,CAAC,EAAE,MAAM,CAAA;KAAE,KAAK,IAAI,CAAC;CACvF,GAAG,OAAO,CAAC;IAAE,SAAS,EAAE,MAAM,CAAC;IAAC,SAAS,EAAE,MAAM,CAAA;CAAE,CAAC,CAkCzD"}

package/dist/commands/docs.js

@@ -1,9 +1,11 @@
 import { KnowledgeEngine } from '@devflow-tools/knowledge-engine';
 import { EmbeddingProvider } from '@devflow-tools/memory-engine';
 import { openGlobalDevFlowDatabase } from '@devflow-tools/database';
+import { resolveStableProjectIdentity } from '@devflow-tools/sdk';
 function createKnowledgeEngine(projectRoot) {
     return new KnowledgeEngine({
         projectRoot,
+        projectId: resolveStableProjectIdentity(projectRoot).projectId,
         embedder: new EmbeddingProvider(),
     });
 }

package/dist/commands/docs.js.map

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package/dist/commands/doctor.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"doctor.d.ts","sourceRoot":"","sources":["../../src/commands/doctor.ts"],"names":[],"mappings":"AAoCA,OAAO,KAAK,EAEV,cAAc,EAIf,MAAM,oBAAoB,CAAC;AAK5B,OAAO,KAAK,EAAE,oBAAoB,EAAE,MAAM,8BAA8B,CAAC;AAEzE,YAAY,EACV,YAAY,EACZ,cAAc,EACd,aAAa,EACb,cAAc,EACd,YAAY,GACb,MAAM,oBAAoB,CAAC;AAwB5B,MAAM,MAAM,YAAY,GAAG,cAAc,CAAC;AAE1C,MAAM,WAAW,aAAa;IAC5B,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,IAAI,CAAC,EAAE,OAAO,CAAC;IACf,MAAM,CAAC,EAAE,OAAO,CAAC;CAClB;AAED,UAAU,eAAe;IACvB,GAAG,CAAC,GAAG,MAAM,EAAE,OAAO,EAAE,GAAG,OAAO,EAAE,CAAC;IACrC,GAAG,CAAC,GAAG,MAAM,EAAE,OAAO,EAAE,GAAG,OAAO,CAAC;IACnC,cAAc,CAAC,CAAC,OAAO,EAAE,OAAO,GAAG,IAAI,CAAC;CACzC;AAED,UAAU,cAAc;IACtB,OAAO,CAAC,GAAG,EAAE,MAAM,GAAG,eAAe,CAAC;IACtC,KAAK,IAAI,IAAI,CAAC;CACf;AAED,MAAM,WAAW,kBAAkB;IACjC,YAAY,CAAC,EAAE,MAAM,CAAC;IACtB,mBAAmB,CAAC,EAAE,SAAS,MAAM,EAAE,CAAC;IACxC,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,kBAAkB,CAAC,EAAE,MAAM,CAAC;IAC5B,oBAAoB,CAAC,EAAE,MAAM,CAAC;IAC9B,qBAAqB,CAAC,EAAE,MAAM,CAAC;IAC/B,eAAe,CAAC,EAAE,MAAM,CAAC;IACzB,gBAAgB,CAAC,EAAE,MAAM,CAAC;IAC1B,GAAG,CAAC,EAAE,MAAM,CAAC,UAAU,CAAC;IACxB,GAAG,CAAC,EAAE,MAAM,MAAM,CAAC;IACnB,YAAY,CAAC,EAAE,CAAC,IAAI,EAAE,MAAM,KAAK,cAAc,CAAC;IAChD,sBAAsB,CAAC,EAAE,MAAM,CAAC;IAChC,OAAO,CAAC,EAAE,CAAC,GAAG,EAAE,MAAM,KAAK,OAAO,CAAC;QAAE,MAAM,EAAE,MAAM,CAAA;KAAE,CAAC,CAAC;IACvD,qBAAqB,CAAC,EAAE,CAAC,OAAO,EAAE;QAChC,OAAO,CAAC,EAAE,MAAM,CAAC;QACjB,GAAG,CAAC,EAAE,MAAM,CAAC,UAAU,CAAC;KACzB,KAAK,OAAO,CAAC,oBAAoB,CAAC,CAAC;CACrC;AAED,MAAM,WAAW,eAAe;IAC9B,MAAM,CAAC,MAAM,EAAE,MAAM,GAAG,IAAI,CAAC;IAC7B,MAAM,CAAC,MAAM,EAAE,MAAM,GAAG,IAAI,CAAC;CAC9B;AAwpKD,wBAAsB,mBAAmB,CACvC,OAAO,GAAE,aAAkB,EAC3B,YAAY,GAAE,kBAAuB,GACpC,OAAO,CAAC,YAAY,CAAC,CA4BvB;AAED,wBAAgB,SAAS,IAAI,OAAO,CAAC,YAAY,CAAC,CAAC;AACnD,wBAAgB,SAAS,CACvB,OAAO,EAAE,aAAa,EACtB,YAAY,CAAC,EAAE,kBAAkB,GAChC,OAAO,CAAC,YAAY,CAAC,CAAC;AAezB,wBAAgB,gBAAgB,CAAC,MAAM,EAAE,YAAY,GAAG,MAAM,CAoB7D;AAED,wBAAsB,gBAAgB,CACpC,OAAO,GAAE,aAAkB,EAC3B,EAAE,GAAE,eAGH,EACD,YAAY,GAAE,kBAAuB,GACpC,OAAO,CAAC,MAAM,CAAC,CAIjB;AAED,MAAM,WAAW,YAAY;IAC3B,KAAK,EAAE;QAAE,UAAU,EAAE,MAAM,CAAC;QAAC,YAAY,EAAE,MAAM,CAAC;QAAC,QAAQ,EAAE,OAAO,CAAA;KAAE,CAAC;IACvE,KAAK,EAAE;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,CAAA;KAAE,CAAC;IACxC,MAAM,EAAE;QAAE,YAAY,EAAE,OAAO,CAAC;QAAC,SAAS,EAAE,MAAM,CAAA;KAAE,CAAC;IACrD,SAAS,EAAE;QAAE,OAAO,EAAE,MAAM,CAAA;KAAE,CAAC;IAC/B,OAAO,EAAE;QAAE,SAAS,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,EAAE,CAAA;KAAE,CAAC;IAChD,SAAS,EAAE;QAAE,UAAU,EAAE,MAAM,CAAA;KAAE,CAAC;IAClC,MAAM,EAAE;QAAE,OAAO,EAAE,OAAO,CAAA;KAAE,CAAC;IAC7B,SAAS,EAAE;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,MAAM,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAA;KAAE,CAAC;IAC7D,UAAU,EAAE,MAAM,CAAC;CACpB;AAOD,wBAAsB,qBAAqB,CACzC,OAAO,SAAgB,GACtB,OAAO,CAAC,YAAY,CAAC,CA8DvB;AAED,wBAAsB,cAAc,IAAI,OAAO,CAAC;IAC9C,KAAK,EAAE,OAAO,CAAC;IACf,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IACxB,UAAU,EAAE,MAAM,CAAC;CACpB,CAAC,CAiBD;AAED,wBAAsB,iBAAiB,IAAI,OAAO,CAAC;IAAE,OAAO,EAAE,OAAO,CAAA;CAAE,CAAC,CAevE;AAED,wBAAsB,mBAAmB,CAAC,IAAI,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC;IAChE,UAAU,EAAE,KAAK,CAAC;QAChB,IAAI,EAAE,MAAM,CAAC;QACb,QAAQ,EAAE,MAAM,CAAC;QACjB,MAAM,EAAE,MAAM,GAAG,IAAI,CAAC;QACtB,EAAE,EAAE,MAAM,CAAC;QACX,SAAS,EAAE,MAAM,CAAC;KACnB,CAAC,CAAC;CACJ,CAAC,CAsBD;AAED,wBAAgB,iBAAiB,IAAI;IAAE,SAAS,EAAE,MAAM,CAAC;IAAC,IAAI,EAAE,OAAO,CAAA;CAAE,CASxE"}

package/dist/commands/doctor.js

@@ -6,21 +6,11 @@ import { basename, dirname, extname, isAbsolute, join, relative, resolve, sep }
 import { spawnSync } from "node:child_process";
 import { fileURLToPath } from "node:url";
 import chalk from "chalk";
-import { DOCTOR_SCHEMA_VERSION, checkMcpHealth, loadPluginsWithDiagnostics, readMcpInventory, redactMcpInventory, readRuntimeEndpointState, listRuntimeHttpCircuits, selectHostAdapter, } from "@devflow-tools/sdk";
+import { DOCTOR_SCHEMA_VERSION, checkMcpHealth, getDaemonRegistryPath, getDaemonSocketPath, getDevFlowStateRoot, getProjectHash, getProjectStateDir, loadPluginsWithDiagnostics, readMcpInventory, redactMcpInventory, readRuntimeEndpointState, listRuntimeHttpCircuits, selectHostAdapter, } from "@devflow-tools/sdk";
 import { resolveActivePlugin, scanClaudeSkillShadowing } from "../lib/plugin-setup.js";
 import { serverStatus } from "./server.js";
 import { inspectSkillHealth } from "./skill-health.js";
-import { getGlobalDevFlowDbPath } from "@devflow-tools/database";
 import { inspectEmbeddingModel } from "@devflow-tools/memory-engine";
-function getProjectHash(rootPath) {
-    return createHash("sha256").update(rootPath).digest("hex").slice(0, 16);
-}
-function getDaemonSocketPath(rootPath) {
-    return join(homedir(), ".devflow", "daemons", `${getProjectHash(rootPath)}.sock`);
-}
-function getDaemonRegistryPath() {
-    return join(homedir(), ".devflow", "daemons.json");
-}
 let databaseSyncConstructor;
 function loadDatabaseSync() {
     if (databaseSyncConstructor)
@@ -36,6 +26,15 @@ function loadDatabaseSync() {
         throw new Error("DevFlow doctor requires Node.js >=22.13.0 to inspect SQLite memory data (node:sqlite is unavailable).");
     }
 }
+function doctorPathOptions(dependencies) {
+    return {
+        homeDir: dependencies.homePath,
+        env: dependencies.env ?? process.env,
+    };
+}
+function getDoctorGlobalDbPath(dependencies) {
+    return join(getDevFlowStateRoot(doctorPathOptions(dependencies)), "global", "devflow.db");
+}
 function sectionStatus(metrics) {
     if (metrics.some((metric) => !metric.ok && metric.severity === "error")) {
         return "red";
@@ -47,6 +46,7 @@ function sectionStatus(metrics) {
 }
 async function checkRuntimeControlPlane(project, dependencies) {
     const home = dependencies.homePath ?? homedir();
+    const pathOptions = doctorPathOptions(dependencies);
     const metrics = [];
     const hostSelection = await selectHostAdapter({
         projectRoot: project,
@@ -132,7 +132,7 @@ async function checkRuntimeControlPlane(project, dependencies) {
             severity: "warning",
         });
     }
-    const endpoint = readRuntimeEndpointState(home);
+    const endpoint = readRuntimeEndpointState(pathOptions);
     metrics.push({
         key: 'runtime_endpoint_registry',
         value: endpoint ?? 'not registered',
@@ -141,7 +141,7 @@ async function checkRuntimeControlPlane(project, dependencies) {
         severity: endpoint?.status === 'degraded' ? 'error' : 'warning',
     });
     const now = (dependencies.now ?? Date.now)();
-    const openCircuits = listRuntimeHttpCircuits(home)
+    const openCircuits = listRuntimeHttpCircuits(pathOptions)
         .filter(circuit => circuit.status === 'open' && (circuit.openUntil ?? 0) > now);
     metrics.push({
         key: 'runtime_http_circuits',
@@ -191,8 +191,9 @@ function daemonRegistryEntryIssues(value) {
 }
 function checkIsolation(project, dependencies) {
     const canonical = canonicalizeProject(project);
+    const pathOptions = doctorPathOptions(dependencies);
     const hash = getProjectHash(canonical.path);
-    const socketPath = getDaemonSocketPath(canonical.path);
+    const socketPath = getDaemonSocketPath(canonical.path, pathOptions);
     const metrics = [
         {
             key: "canonical_project",
@@ -210,7 +211,7 @@ function checkIsolation(project, dependencies) {
             severity: "error",
         },
     ];
-    const registryPath = dependencies.registryPath ?? getDaemonRegistryPath();
+    const registryPath = dependencies.registryPath ?? getDaemonRegistryPath(pathOptions);
     if (!existsSync(registryPath)) {
         metrics.push({
             key: "daemon_registry",
@@ -269,7 +270,7 @@ function checkIsolation(project, dependencies) {
                 ok: projectEntries.length <= 1,
                 severity: "warning",
             });
-            const registeredSocketPaths = projectEntries.map((entry) => getDaemonSocketPath(entry.rootPath));
+            const registeredSocketPaths = projectEntries.map((entry) => getDaemonSocketPath(entry.rootPath, pathOptions));
             metrics.push({
                 key: "registered_daemon_socket_paths",
                 value: registeredSocketPaths,
@@ -800,7 +801,7 @@ async function checkVectors(project, dependencies) {
         }
     }
     const now = (dependencies.now ?? Date.now)();
-    const errorLogPath = join(dependencies.homePath ?? homedir(), ".devflow", "errors", "embedder.log");
+    const errorLogPath = join(getDevFlowStateRoot(doctorPathOptions(dependencies)), "errors", "embedder.log");
     let recentErrors = 0;
     if (existsSync(errorLogPath)) {
         try {
@@ -868,10 +869,7 @@ async function checkVectors(project, dependencies) {
 }
 function checkTelemetry(project, strict, dependencies) {
     const metrics = [];
-    const home = dependencies.homePath ?? homedir();
-    const globalDbPath = dependencies.homePath
-        ? join(home, ".devflow", "global", "devflow.db")
-        : getGlobalDevFlowDbPath(home);
+    const globalDbPath = getDoctorGlobalDbPath(dependencies);
     const cutoff = (dependencies.now ?? Date.now)() - 24 * 60 * 60 * 1000;
     const now = (dependencies.now ?? Date.now)();
     const strictSeverity = strict ? "error" : "warning";
@@ -1160,8 +1158,7 @@ function checkTelemetry(project, strict, dependencies) {
                     severity: "info",
                 });
             }
-            const hookStateDir = dependencies.env?.DEVFLOW_STATE_DIR
-                ?? join(home, ".devflow", "state", getProjectHash(project));
+            const hookStateDir = getProjectStateDir(project, doctorPathOptions(dependencies));
             const spoolKinds = ["session-start-pending", "memory-turn-pending", "session-finalize-pending"];
             const spoolBacklog = Object.fromEntries(spoolKinds.map(kind => {
                 const directory = join(hookStateDir, kind);
@@ -1305,10 +1302,7 @@ function checkTelemetry(project, strict, dependencies) {
             db?.close();
         }
     }
-    const cacheDirs = [...new Set([
-            join(dirname(globalDbPath), "telemetry-cache"),
-            join(home, ".devflow", "telemetry-cache"),
-        ])];
+    const cacheDirs = [join(dirname(globalDbPath), "telemetry-cache")];
     let cacheFiles = 0;
     try {
         cacheFiles = cacheDirs.reduce((count, cacheDir) => count + (existsSync(cacheDir)
@@ -1356,9 +1350,8 @@ function diagnosticTimestamp(value) {
 }
 function checkRuntimeSecurity(dependencies) {
     const metrics = [];
-    const home = dependencies.homePath ?? homedir();
     const env = dependencies.env ?? process.env;
-    const keyDir = join(home, ".devflow", "keys");
+    const keyDir = join(getDevFlowStateRoot(doctorPathOptions(dependencies)), "keys");
     const secretSpecs = [
         ["local_api_key", "DEVFLOW_API_KEY", "local.key"],
         ["local_hmac_secret", "DEVFLOW_HMAC_SECRET", "hmac.key"],
@@ -1450,7 +1443,7 @@ function checkRuntimeSecurity(dependencies) {
             });
         }
     }
-    const compressorLog = join(home, ".devflow", "errors", "compressor.log");
+    const compressorLog = join(getDevFlowStateRoot(doctorPathOptions(dependencies)), "errors", "compressor.log");
     let recentErrors = 0;
     let malformedRecords = 0;
     if (existsSync(compressorLog)) {
@@ -1500,8 +1493,7 @@ function checkRuntimeSecurity(dependencies) {
 }
 function checkBenchmark(dependencies) {
     const metrics = [];
-    const home = dependencies.homePath ?? homedir();
-    const path = getGlobalDevFlowDbPath(home);
+    const path = getDoctorGlobalDbPath(dependencies);
     if (!existsSync(path)) {
         metrics.push({
             key: "latest_benchmark",
@@ -1605,8 +1597,7 @@ function checkBenchmark(dependencies) {
 }
 function checkRetrievalQuality(project, dependencies) {
     const metrics = [];
-    const home = dependencies.homePath ?? homedir();
-    const path = getGlobalDevFlowDbPath(home);
+    const path = getDoctorGlobalDbPath(dependencies);
     if (!existsSync(path)) {
         metrics.push({
             key: 'retrieval_quality_report',
@@ -1698,8 +1689,9 @@ function hookDebugFootprint(root) {
 function checkHookPathHealth(dependencies) {
     const metrics = [];
     const home = dependencies.homePath ?? homedir();
-    const fallbackPaths = [join(home, ".devflow", "errors", "hook-fallback.log")];
-    const datedFallbackDir = join(home, ".devflow", "logs", "hook-fallback");
+    const stateRoot = getDevFlowStateRoot(doctorPathOptions(dependencies));
+    const fallbackPaths = [join(stateRoot, "errors", "hook-fallback.log")];
+    const datedFallbackDir = join(stateRoot, "logs", "hook-fallback");
     if (existsSync(datedFallbackDir)) {
         try {
             for (const name of readdirSync(datedFallbackDir)) {
@@ -1766,9 +1758,7 @@ function checkHookPathHealth(dependencies) {
         ok: malformedFallbacks === 0,
         severity: "error",
     });
-    const globalDbPath = dependencies.homePath
-        ? join(home, ".devflow", "global", "devflow.db")
-        : getGlobalDevFlowDbPath(home);
+    const globalDbPath = getDoctorGlobalDbPath(dependencies);
     let daemonRequests = 0;
     let failedDaemonRequests = 0;
     let averageDaemonResponseMs = null;
@@ -1830,7 +1820,7 @@ function checkHookPathHealth(dependencies) {
         ok: degradedFeatures.length === 0,
         severity: "warning",
     });
-    const debugRoot = join(home, ".devflow", "logs", "hook-debug");
+    const debugRoot = join(getDevFlowStateRoot(doctorPathOptions(dependencies)), "logs", "hook-debug");
     try {
         const footprint = hookDebugFootprint(debugRoot);
         metrics.push({
@@ -4681,7 +4671,7 @@ function checkMemoryQuality(project, dependencies) {
                 metrics.push({
                     key: 'memory_retrieval_attribution',
                     value: Object.fromEntries(attribution.map(row => [row.access_type, Number(row.count)])),
-                    target: 'selected/exposed are distinct from adopted',
+                    target: 'selected, consumed, verified, and outcome stages remain distinct',
                     ok: true,
                     severity: 'info',
                 });
@@ -4814,7 +4804,7 @@ function checkDataFace(dependencies) {
     metrics.push({
         key: "shared_retrieval_adapters",
         value: adapters,
-        target: ["getProjectContextResult", "getMemoryResult", "getKnowledgeResult"],
+        target: ["projectDiagnosticCodeResult", "getDiagnosticMemoryResult", "getDiagnosticKnowledgeResult"],
         ok: manifest?.dataFace?.status === "green" && adapters.length === 3,
         severity: "error",
     });
@@ -4835,7 +4825,7 @@ async function checkUiReachability(dependencies) {
     const { manifest, metrics } = acceptanceManifestMetrics(dependencies);
     const routes = manifest?.ui?.routes ?? [];
     metrics.push({ key: "dashboard_routes", value: routes.length, target: ">= 13", ok: manifest?.ui?.status === "green" && routes.length >= 13, severity: "warning" });
-    const endpoint = readRuntimeEndpointState(dependencies.homePath ?? homedir());
+    const endpoint = readRuntimeEndpointState(doctorPathOptions(dependencies));
     if ((!endpoint || endpoint.status === "stopped") && !dependencies.httpGet) {
         metrics.push({
             key: "dashboard_server_health",
@@ -4923,7 +4913,7 @@ export async function runDoctorCommand(options = {}, io = {
     return result.exitCode;
 }
 async function createLegacyEngines(project) {
-    const { createEngines } = await import("@devflow-tools/context-engine");
+    const { createEngines } = await import('@devflow-tools/mcp-server/composition');
     return createEngines(project);
 }
 export async function runLegacyDoctorReport(project = process.cwd()) {