@desplega.ai/agent-fs 0.1.4 → 0.2.0

package/dist/cli.js

@@ -1,45 +1,204 @@
 #!/usr/bin/env bun
 // @bun
-var y=import.meta.require;import{Command as mt}from"commander";import{getConfig as gt,listUserOrgs as yt,getUserByApiKey as ft,VERSION as wt}from"@/core";import{getConfig as V}from"@/core";class N{baseUrl;apiKey;constructor(){let n=V();this.baseUrl=process.env.AGENT_FS_API_URL??`http://${n.server.host}:${n.server.port}`,this.apiKey=process.env.AGENT_FS_API_KEY??n.auth.apiKey}async request(n,t){let e=new Headers(t?.headers);if(this.apiKey)e.set("Authorization",`Bearer ${this.apiKey}`);e.set("Content-Type","application/json");let i;try{i=await fetch(`${this.baseUrl}${n}`,{...t,headers:e})}catch(a){throw Error(`Cannot connect to agent-fs daemon at ${this.baseUrl}. Is it running? Start with: agent-fs daemon start`)}let o;try{o=await i.json()}catch{let a=await i.text().catch(()=>"");throw Error(`Unexpected response from daemon (${i.status}): ${a||"empty"}`)}if(!i.ok){let a=o.message??o.error??"Request failed",c=o.suggestion?`
-  Suggestion: ${o.suggestion}`:"";throw Error(`${a}${c}`)}return o}async get(n){return this.request(n)}async post(n,t){return this.request(n,{method:"POST",body:JSON.stringify(t)})}async callOp(n,t,e){return this.post(`/orgs/${n}/ops`,{op:t,...e})}setApiKey(n){this.apiKey=n}}import{Command as On}from"commander";import{createDatabase as nn,getConfig as J,AgentS3Client as tn,getUserByApiKey as en,resolveContext as an,dispatchOp as on,ensureLocalUser as cn,createEmbeddingProviderFromEnv as rn}from"@/core";var l=null,k=null,I=null,E=null;async function sn(){let n=U();if(n.embeddingProvider===void 0){let t=J();if(!E)E=rn(t.embedding);n.embeddingProvider=await E}return n}function U(){if(I)return I;let n=J();l=nn(),k=new tn(n.s3);let{apiKey:t}=cn(l),e=en(l,t);if(!e)throw Error("Invalid API key in config");let i=an(l,{userId:e.id});return I={db:l,s3:k,orgId:i.orgId,driveId:i.driveId,userId:e.id},I}function S(){return U().orgId}async function $(n,t,e){let i=await sn();return on(i,t,e)}async function q(){try{let n=J(),t=`http://${n.server.host}:${n.server.port}/health`;return(await fetch(t,{signal:AbortSignal.timeout(1000)})).ok}catch{return!1}}import{getOpDefinition as Tn}from"@/core";function w(n){if(n<1024)return`${n} B`;if(n<1048576)return`${(n/1024).toFixed(1)} KB`;if(n<1073741824)return`${(n/1048576).toFixed(1)} MB`;return`${(n/1073741824).toFixed(1)} GB`}function v(n){if(!n)return"-";let t=typeof n==="string"?new Date(n):n;if(isNaN(t.getTime()))return String(n);return t.toISOString().replace("T"," ").replace(/\.\d{3}Z$/,"Z")}function p(n,t){return n.length>=t?n:n+" ".repeat(t-n.length)}function O(n,t){return n.length>=t?n:" ".repeat(t-n.length)+n}function dn(n){let t=n.entries??[];if(t.length===0)return"(empty directory)";let e=Math.max(4,...t.map((r)=>String(r.name).length)),i=Math.max(4,...t.map((r)=>String(r.type).length)),o=Math.max(4,...t.map((r)=>w(r.size??0).length)),a=p("NAME",e)+"  "+p("TYPE",i)+"  "+O("SIZE",o)+"  MODIFIED",c=t.map((r)=>p(r.name,e)+"  "+p(r.type,i)+"  "+O(w(r.size??0),o)+"  "+v(r.modifiedAt));return[a,...c].join(`
-`)}function A(n){let e=(n.content??"").split(`
-`);if(e.length>0&&e[e.length-1]==="")e.pop();let i=n.offset??1,o=String(i+e.length-1).length;return e.map((a,c)=>`${O(String(i+c),o)}  ${a}`).join(`
-`)}function hn(n){let t=[["Path",n.path??"-"],["Size",w(n.size??0)],["Content-Type",n.contentType??"-"],["Author",n.author??"-"],["Version",n.currentVersion!=null?String(n.currentVersion):"-"],["Created",v(n.createdAt)],["Modified",v(n.modifiedAt)],["Deleted",n.isDeleted?"yes":"no"]];if(n.embeddingStatus)t.push(["Embedding",n.embeddingStatus]);let e=Math.max(...t.map(([i])=>i.length));return t.map(([i,o])=>`${p(i+":",e+1)}  ${o}`).join(`
-`)}function mn(n){let t=n.versions??[];if(t.length===0)return"(no version history)";return t.map((e)=>{let i=[`v${e.version}  ${v(e.createdAt)}  ${e.author??"-"}  [${e.operation}]`];if(e.message)i.push(`  ${e.message}`);if(e.diffSummary)i.push(`  ${e.diffSummary}`);return i.join(`
+var wu=Object.defineProperty;var Zu=(t)=>t;function $u(t,n){this[t]=Zu.bind(null,n)}var rt=(t,n)=>{for(var o in n)wu(t,o,{get:n[o],enumerable:!0,configurable:!0,set:$u.bind(n,o)})};var g=(t,n)=>()=>(t&&(n=t(t=0)),n);var rn=import.meta.require;import{Database as Bu}from"bun:sqlite";import{platform as Mu}from"os";import{existsSync as Ju}from"fs";function Yu(){if(Yo)return;if(Yo=!0,Mu()!=="darwin")return;let t=["/opt/homebrew/opt/sqlite/lib/libsqlite3.dylib","/usr/local/opt/sqlite3/lib/libsqlite3.dylib"];for(let n of t)if(Ju(n)){try{Bu.setCustomSQLite(n)}catch{}return}console.warn(`Warning: Could not find Homebrew SQLite. Extension loading may fail on macOS.
+Install with: brew install sqlite`)}var Yo=!1;var Go=g(()=>{Yu()});import{mkdirSync as Gu,readFileSync as Cu,writeFileSync as vn,existsSync as Co}from"fs";import{join as Vt}from"path";function Fu(){let t=process.env.AGENT_FS_HOME??Vt(process.env.HOME??"/tmp",".agent-fs");if(t.startsWith("~/"))return Vt(process.env.HOME??"/tmp",t.slice(2));return t}function m(){return Fu()}function c(){return Vt(m(),"config.json")}function Lt(){return Vt(m(),"agent-fs.db")}function Qu(){let t=m();if(!Co(t))Gu(t,{recursive:!0})}function Z(){Qu();let t=c();if(!Co(t))return vn(t,JSON.stringify(An,null,2)),{...An};let n=Cu(t,"utf-8"),o=JSON.parse(n);return{...An,...o}}function Fo(t,n){let o=Z();o[t]=n,vn(c(),JSON.stringify(o,null,2))}function v(t,n){let o=Z(),i=t.split("."),e=o;for(let u=0;u<i.length-1;u++)e=e[i[u]];e[i[i.length-1]]=n,vn(c(),JSON.stringify(o,null,2))}var An;var Zt=g(()=>{An={s3:{provider:"minio",bucket:"agentfs",region:"us-east-1",endpoint:"http://localhost:9000",accessKeyId:"",secretAccessKey:""},embedding:{provider:"local",model:"",apiKey:""},server:{port:7433,host:"127.0.0.1",cors:{origins:["*"]},rateLimit:{requestsPerMinute:60}},auth:{apiKey:""},minio:{containerId:"",managed:!0}}});var T={};rt(T,{users:()=>$t,orgs:()=>Bt,orgMembers:()=>fu,files:()=>Hu,fileVersions:()=>Wu,events:()=>Vu,drives:()=>qt,driveMembers:()=>Pu,contentChunks:()=>qu,comments:()=>Ku});import{sqliteTable as x,text as R,integer as d,primaryKey as ln}from"drizzle-orm/sqlite-core";var $t,Bt,fu,qt,Pu,Hu,Wu,Ku,Vu,qu;var Qo=g(()=>{$t=x("users",{id:R("id").primaryKey(),email:R("email").notNull().unique(),apiKeyHash:R("api_key_hash").notNull(),createdAt:d("created_at",{mode:"timestamp"}).notNull()}),Bt=x("orgs",{id:R("id").primaryKey(),name:R("name").notNull(),isPersonal:d("is_personal",{mode:"boolean"}).notNull().default(!1),createdAt:d("created_at",{mode:"timestamp"}).notNull()}),fu=x("org_members",{orgId:R("org_id").notNull().references(()=>Bt.id),userId:R("user_id").notNull().references(()=>$t.id),role:R("role",{enum:["viewer","editor","admin"]}).notNull()},(t)=>({pk:ln({columns:[t.orgId,t.userId]})})),qt=x("drives",{id:R("id").primaryKey(),orgId:R("org_id").notNull().references(()=>Bt.id),name:R("name").notNull(),isDefault:d("is_default",{mode:"boolean"}).notNull().default(!1),createdAt:d("created_at",{mode:"timestamp"}).notNull()}),Pu=x("drive_members",{driveId:R("drive_id").notNull().references(()=>qt.id),userId:R("user_id").notNull().references(()=>$t.id),role:R("role",{enum:["viewer","editor","admin"]}).notNull()},(t)=>({pk:ln({columns:[t.driveId,t.userId]})})),Hu=x("files",{path:R("path").notNull(),driveId:R("drive_id").notNull().references(()=>qt.id),size:d("size").notNull(),contentType:R("content_type"),author:R("author").notNull(),currentVersionId:R("current_version_id"),createdAt:d("created_at",{mode:"timestamp"}).notNull(),modifiedAt:d("modified_at",{mode:"timestamp"}).notNull(),isDeleted:d("is_deleted",{mode:"boolean"}).notNull().default(!1),embeddingStatus:R("embedding_status",{enum:["pending","indexed","failed"]}).default("pending")},(t)=>({pk:ln({columns:[t.path,t.driveId]})})),Wu=x("file_versions",{id:d("id").primaryKey({autoIncrement:!0}),path:R("path").notNull(),driveId:R("drive_id").notNull(),version:d("version").notNull(),s3VersionId:R("s3_version_id").notNull(),author:R("author").notNull(),operation:R("operation",{enum:["write","edit","append","delete","revert"]}).notNull(),message:R("message"),diffSummary:R("diff_summary"),size:d("size"),etag:R("etag"),createdAt:d("created_at",{mode:"timestamp"}).notNull()}),Ku=x("comments",{id:R("id").primaryKey(),parentId:R("parent_id"),orgId:R("org_id").notNull().references(()=>Bt.id),driveId:R("drive_id").notNull().references(()=>qt.id),path:R("path").notNull(),lineStart:d("line_start"),lineEnd:d("line_end"),quotedContent:R("quoted_content"),fileVersionId:d("file_version_id"),body:R("body").notNull(),author:R("author").notNull().references(()=>$t.id),resolved:d("resolved",{mode:"boolean"}).notNull().default(!1),resolvedBy:R("resolved_by"),resolvedAt:d("resolved_at",{mode:"timestamp"}),createdAt:d("created_at",{mode:"timestamp"}).notNull(),updatedAt:d("updated_at",{mode:"timestamp"}).notNull(),isDeleted:d("is_deleted",{mode:"boolean"}).notNull().default(!1)}),Vu=x("events",{id:R("id").primaryKey(),orgId:R("org_id").notNull().references(()=>Bt.id),type:R("type").notNull(),resourceType:R("resource_type").notNull(),resourceId:R("resource_id").notNull(),actor:R("actor").notNull().references(()=>$t.id),target:R("target"),status:R("status",{enum:["created","ack","deleted"]}).notNull().default("created"),metadata:R("metadata"),createdAt:d("created_at",{mode:"timestamp"}).notNull()}),qu=x("content_chunks",{id:d("id").primaryKey({autoIncrement:!0}),filePath:R("file_path").notNull(),driveId:R("drive_id").notNull(),chunkIndex:d("chunk_index").notNull(),content:R("content").notNull(),charOffset:d("char_offset").notNull(),tokenCount:d("token_count").notNull()})});var fo=`
+CREATE TABLE IF NOT EXISTS users (
+  id TEXT PRIMARY KEY,
+  email TEXT NOT NULL UNIQUE,
+  api_key_hash TEXT NOT NULL,
+  created_at INTEGER NOT NULL
+);
+
+CREATE TABLE IF NOT EXISTS orgs (
+  id TEXT PRIMARY KEY,
+  name TEXT NOT NULL,
+  is_personal INTEGER NOT NULL DEFAULT 0,
+  created_at INTEGER NOT NULL
+);
+
+CREATE TABLE IF NOT EXISTS org_members (
+  org_id TEXT NOT NULL REFERENCES orgs(id),
+  user_id TEXT NOT NULL REFERENCES users(id),
+  role TEXT NOT NULL CHECK(role IN ('viewer', 'editor', 'admin')),
+  PRIMARY KEY (org_id, user_id)
+);
+
+CREATE TABLE IF NOT EXISTS drives (
+  id TEXT PRIMARY KEY,
+  org_id TEXT NOT NULL REFERENCES orgs(id),
+  name TEXT NOT NULL,
+  is_default INTEGER NOT NULL DEFAULT 0,
+  created_at INTEGER NOT NULL
+);
+
+CREATE TABLE IF NOT EXISTS drive_members (
+  drive_id TEXT NOT NULL REFERENCES drives(id),
+  user_id TEXT NOT NULL REFERENCES users(id),
+  role TEXT NOT NULL CHECK(role IN ('viewer', 'editor', 'admin')),
+  PRIMARY KEY (drive_id, user_id)
+);
+
+CREATE TABLE IF NOT EXISTS files (
+  path TEXT NOT NULL,
+  drive_id TEXT NOT NULL REFERENCES drives(id),
+  size INTEGER NOT NULL,
+  content_type TEXT,
+  author TEXT NOT NULL,
+  current_version_id TEXT,
+  created_at INTEGER NOT NULL,
+  modified_at INTEGER NOT NULL,
+  is_deleted INTEGER NOT NULL DEFAULT 0,
+  embedding_status TEXT DEFAULT 'pending' CHECK(embedding_status IN ('pending', 'indexed', 'failed')),
+  PRIMARY KEY (path, drive_id)
+);
+
+CREATE TABLE IF NOT EXISTS file_versions (
+  id INTEGER PRIMARY KEY AUTOINCREMENT,
+  path TEXT NOT NULL,
+  drive_id TEXT NOT NULL,
+  version INTEGER NOT NULL,
+  s3_version_id TEXT NOT NULL,
+  author TEXT NOT NULL,
+  operation TEXT NOT NULL CHECK(operation IN ('write', 'edit', 'append', 'delete', 'revert')),
+  message TEXT,
+  diff_summary TEXT,
+  size INTEGER,
+  etag TEXT,
+  created_at INTEGER NOT NULL
+);
+
+CREATE TABLE IF NOT EXISTS comments (
+  id TEXT PRIMARY KEY,
+  parent_id TEXT REFERENCES comments(id) ON DELETE CASCADE,
+  org_id TEXT NOT NULL REFERENCES orgs(id),
+  drive_id TEXT NOT NULL REFERENCES drives(id),
+  path TEXT NOT NULL,
+  line_start INTEGER,
+  line_end INTEGER,
+  quoted_content TEXT,
+  file_version_id INTEGER REFERENCES file_versions(id),
+  body TEXT NOT NULL,
+  author TEXT NOT NULL REFERENCES users(id),
+  resolved INTEGER NOT NULL DEFAULT 0,
+  resolved_by TEXT,
+  resolved_at INTEGER,
+  created_at INTEGER NOT NULL,
+  updated_at INTEGER NOT NULL,
+  is_deleted INTEGER NOT NULL DEFAULT 0
+);
+
+CREATE INDEX IF NOT EXISTS idx_comments_path ON comments(drive_id, path);
+CREATE INDEX IF NOT EXISTS idx_comments_parent ON comments(parent_id);
+CREATE INDEX IF NOT EXISTS idx_comments_org ON comments(org_id);
+
+CREATE TABLE IF NOT EXISTS events (
+  id TEXT PRIMARY KEY,
+  org_id TEXT NOT NULL REFERENCES orgs(id),
+  type TEXT NOT NULL,
+  resource_type TEXT NOT NULL,
+  resource_id TEXT NOT NULL,
+  actor TEXT NOT NULL REFERENCES users(id),
+  target TEXT,
+  status TEXT NOT NULL DEFAULT 'created' CHECK(status IN ('created', 'ack', 'deleted')),
+  metadata TEXT,
+  created_at INTEGER NOT NULL
+);
+
+CREATE INDEX IF NOT EXISTS idx_events_resource ON events(resource_type, resource_id);
+CREATE INDEX IF NOT EXISTS idx_events_actor ON events(actor);
+
+CREATE TABLE IF NOT EXISTS content_chunks (
+  id INTEGER PRIMARY KEY AUTOINCREMENT,
+  file_path TEXT NOT NULL,
+  drive_id TEXT NOT NULL,
+  chunk_index INTEGER NOT NULL,
+  content TEXT NOT NULL,
+  char_offset INTEGER NOT NULL,
+  token_count INTEGER NOT NULL
+);
+`,Po=`
+-- FTS5 full-text index (internal content storage)
+CREATE VIRTUAL TABLE IF NOT EXISTS files_fts USING fts5(
+  path, content, drive_id UNINDEXED
+);
+
+-- sqlite-vec vector index for semantic search (768 dimensions)
+CREATE VIRTUAL TABLE IF NOT EXISTS chunk_vectors USING vec0(
+  chunk_id INTEGER PRIMARY KEY,
+  embedding float[768]
+);
+`;import{Database as ku}from"bun:sqlite";import{drizzle as ju}from"drizzle-orm/bun-sqlite";import*as Ho from"sqlite-vec";import{existsSync as pu,mkdirSync as bu}from"fs";import{dirname as hu}from"path";function zu(t){Ho.load(t)}function a(t){let n=t??Lt(),o=hu(n);if(!pu(o))bu(o,{recursive:!0});let i=new ku(n);return zu(i),i.exec("PRAGMA journal_mode=WAL;"),i.exec("PRAGMA foreign_keys=ON;"),i.exec(fo),i.exec(Po),ju(i,{schema:T})}var B=g(()=>{Go();Zt();Qo()});import{S3Client as mu,PutObjectCommand as cu,GetObjectCommand as xu,DeleteObjectCommand as au,CopyObjectCommand as su,ListObjectsV2Command as tT,HeadObjectCommand as nT,ListObjectVersionsCommand as oT,GetBucketVersioningCommand as iT,PutBucketVersioningCommand as eT}from"@aws-sdk/client-s3";class Tt{client;bucket;versioningEnabled=!1;constructor(t){this.bucket=t.bucket,this.client=new mu({region:t.region,endpoint:t.endpoint,credentials:{accessKeyId:t.accessKeyId,secretAccessKey:t.secretAccessKey},forcePathStyle:!0}),this.versioningEnabled=t.versioningEnabled??!1}async putObject(t,n,o){let i=await this.client.send(new cu({Bucket:this.bucket,Key:t,Body:typeof n==="string"?Buffer.from(n):n,Metadata:o}));return{etag:i.ETag,versionId:i.VersionId}}async getObject(t,n){let o=await this.client.send(new xu({Bucket:this.bucket,Key:t,...n&&{VersionId:n}}));return{body:await o.Body.transformToByteArray(),contentType:o.ContentType,size:o.ContentLength,versionId:o.VersionId,etag:o.ETag}}async deleteObject(t){await this.client.send(new au({Bucket:this.bucket,Key:t}))}async copyObject(t,n){let o=await this.client.send(new su({Bucket:this.bucket,CopySource:`${this.bucket}/${t}`,Key:n}));return{etag:o.CopyObjectResult?.ETag,versionId:o.VersionId}}async listObjects(t,n){let o=await this.client.send(new tT({Bucket:this.bucket,Prefix:t,...n?.delimiter&&{Delimiter:n.delimiter}}));return{objects:(o.Contents??[]).map((i)=>({key:i.Key,size:i.Size??0,lastModified:i.LastModified??new Date,etag:i.ETag})),prefixes:(o.CommonPrefixes??[]).map((i)=>i.Prefix)}}async headObject(t){let n=await this.client.send(new nT({Bucket:this.bucket,Key:t}));return{contentType:n.ContentType,size:n.ContentLength??0,lastModified:n.LastModified,etag:n.ETag,versionId:n.VersionId}}async listObjectVersions(t){return((await this.client.send(new oT({Bucket:this.bucket,Prefix:t}))).Versions??[]).filter((o)=>o.Key===t).map((o)=>({versionId:o.VersionId,lastModified:o.LastModified??new Date,size:o.Size??0,isLatest:o.IsLatest??!1}))}async checkVersioningEnabled(){try{return(await this.client.send(new iT({Bucket:this.bucket}))).Status==="Enabled"}catch{return!1}}async enableVersioning(){try{return await this.client.send(new eT({Bucket:this.bucket,VersioningConfiguration:{Status:"Enabled"}})),this.versioningEnabled=!0,!0}catch{return!1}}}var Wo=()=>{};var Ko=g(()=>{Wo()});var s,X,k,tt,Mt,j;var K=g(()=>{s=class s extends Error{code;suggestion;constructor(t,n,o){super(n);this.name=this.constructor.name,this.code=t,this.suggestion=o}toJSON(){return{error:this.code,message:this.message,...this.suggestion&&{suggestion:this.suggestion}}}};X=class X extends s{path;constructor(t,n){super("NOT_FOUND",t,n?.suggestion);this.path=n?.path}toJSON(){return{...super.toJSON(),...this.path&&{path:this.path}}}};k=class k extends s{requiredRole;yourRole;constructor(t,n){super("PERMISSION_DENIED",t,n?.suggestion);this.requiredRole=n?.requiredRole,this.yourRole=n?.yourRole}toJSON(){return{...super.toJSON(),...this.requiredRole&&{required_role:this.requiredRole},...this.yourRole&&{your_role:this.yourRole}}}};tt=class tt extends s{path;constructor(t,n){super("EDIT_CONFLICT",t,n?.suggestion);this.path=n?.path}toJSON(){return{...super.toJSON(),...this.path&&{path:this.path}}}};Mt=class Mt extends s{path;constructor(t,n){super("INDEXING_IN_PROGRESS",t,n?.suggestion??"Try again in a moment");this.path=n?.path}toJSON(){return{...super.toJSON(),...this.path&&{path:this.path}}}};j=class j extends s{field;constructor(t,n){super("VALIDATION_ERROR",t,n?.suggestion);this.field=n?.field}toJSON(){return{...super.toJSON(),...this.field&&{field:this.field}}}}});import{eq as Vo,and as uT}from"drizzle-orm";function Jt(t){return TT[t]??"admin"}function nt(t,n,o){return t.select().from(T.driveMembers).where(uT(Vo(T.driveMembers.driveId,o),Vo(T.driveMembers.userId,n))).get()?.role??null}function Yt(t,n){let o=nt(t,n.userId,n.driveId);if(!o)throw new k("You do not have access to this drive",{requiredRole:n.requiredRole,yourRole:"none",suggestion:"Request access from the drive admin"});if(qo[o]<qo[n.requiredRole])throw new k(`This operation requires '${n.requiredRole}' role, but you have '${o}'`,{requiredRole:n.requiredRole,yourRole:o,suggestion:n.requiredRole==="editor"?"Ask a drive admin to upgrade your role to editor":"Ask a drive admin to upgrade your role"})}var qo,TT;var kt=g(()=>{B();K();qo={viewer:0,editor:1,admin:2},TT={ls:"viewer",cat:"viewer",tail:"viewer",stat:"viewer",grep:"viewer",fts:"viewer",search:"viewer",log:"viewer",diff:"viewer",recent:"viewer",tree:"viewer",glob:"viewer",write:"editor",edit:"editor",append:"editor",rm:"editor",mv:"editor",cp:"editor",revert:"editor",reindex:"admin","comment-add":"editor","comment-list":"viewer","comment-get":"viewer","comment-update":"editor","comment-delete":"editor","comment-resolve":"editor"}});function Et(t){let n=t;if(!n.startsWith("/"))n="/"+n;if(!n.endsWith("/"))n+="/";return n}function ko(t){return t.startsWith("/")?t.slice(1):t}import{eq as At,and as Un,sql as ET}from"drizzle-orm";function l(t,n,o){let i=ko(o);return`${t}/drives/${n}/${i}`}async function dn(t,n){return(t.db.select({maxVersion:ET`MAX(version)`}).from(T.fileVersions).where(Un(At(T.fileVersions.path,n),At(T.fileVersions.driveId,t.driveId))).get()?.maxVersion??0)+1}async function Q(t,n){let o=await dn(t,n.path),i=new Date;t.db.insert(T.fileVersions).values({path:n.path,driveId:t.driveId,version:o,s3VersionId:n.s3VersionId,author:t.userId,operation:n.operation,message:n.message??null,diffSummary:n.diffSummary??null,size:n.size??null,etag:n.etag??null,createdAt:i}).run();let e=t.db.select().from(T.files).where(Un(At(T.files.path,n.path),At(T.files.driveId,t.driveId))).get();if(e)t.db.update(T.files).set({size:n.size??e.size,author:t.userId,currentVersionId:String(o),modifiedAt:i,isDeleted:n.operation==="delete"}).where(Un(At(T.files.path,n.path),At(T.files.driveId,t.driveId))).run();else t.db.insert(T.files).values({path:n.path,driveId:t.driveId,size:n.size??0,author:t.userId,currentVersionId:String(o),createdAt:i,modifiedAt:i,isDeleted:n.operation==="delete"}).run();return o}var Y=g(()=>{B()});function Sn(t){return t.$client}function Nt(t,n){let o=Sn(t);o.prepare("DELETE FROM files_fts WHERE path = ? AND drive_id = ?").run(n.path,n.driveId),o.prepare("INSERT INTO files_fts(path, content, drive_id) VALUES (?, ?, ?)").run(n.path,n.content,n.driveId)}function jo(t,n){Sn(t).prepare("DELETE FROM files_fts WHERE path = ? AND drive_id = ?").run(n.path,n.driveId)}function po(t,n){let o=Sn(t),i,e;if(n.pathPrefix)i=`
+      SELECT path, snippet(files_fts, 1, '<b>', '</b>', '...', 32) as snippet, rank
+      FROM files_fts
+      WHERE content MATCH ? AND drive_id = ? AND path LIKE ?
+      ORDER BY rank
+      LIMIT 50
+    `,e=[n.pattern,n.driveId,n.pathPrefix+"%"];else i=`
+      SELECT path, snippet(files_fts, 1, '<b>', '</b>', '...', 32) as snippet, rank
+      FROM files_fts
+      WHERE content MATCH ? AND drive_id = ?
+      ORDER BY rank
+      LIMIT 50
+    `,e=[n.pattern,n.driveId];return o.prepare(i).all(...e)}async function bo(t){try{let{RecursiveChunker:n}=await import("chonkie");return(await(await n.create({chunkSize:900})).chunk(t)).map((e)=>({content:e.text,charOffset:e.startIndex??0,tokenCount:e.tokenCount??Math.ceil(e.text.length/4)}))}catch{return NT(t)}}function NT(t){let i=[];if(t.length<=3600)return[{content:t,charOffset:0,tokenCount:Math.ceil(t.length/4)}];let e=0;while(e<t.length){let u=Math.min(e+3600,t.length),E=t.slice(e,u);if(u<t.length){let y=E.lastIndexOf(`
+
+`);if(y>1800)E=E.slice(0,y)}if(i.push({content:E,charOffset:e,tokenCount:Math.ceil(E.length/4)}),e+=E.length-512,e<=i[i.length-1].charOffset)e=i[i.length-1].charOffset+E.length}return i}import{eq as yt,and as jt}from"drizzle-orm";function yT(t){return t.$client}class ho{permits;waiting=[];constructor(t){this.permits=t}async acquire(){if(this.permits>0)return this.permits--,()=>this.release();return new Promise((t)=>{this.waiting.push(()=>{this.permits--,t(()=>this.release())})})}release(){this.permits++;let t=this.waiting.shift();if(t)t()}}async function Xn(t,n,o){let i=yT(t);try{let e=await bo(o.content),u=t.select({id:T.contentChunks.id}).from(T.contentChunks).where(jt(yt(T.contentChunks.filePath,o.path),yt(T.contentChunks.driveId,o.driveId))).all();for(let L of u)i.prepare("DELETE FROM chunk_vectors WHERE chunk_id = ?").run(L.id);t.delete(T.contentChunks).where(jt(yt(T.contentChunks.filePath,o.path),yt(T.contentChunks.driveId,o.driveId))).run();let E=[];for(let L=0;L<e.length;L++){let D=t.insert(T.contentChunks).values({filePath:o.path,driveId:o.driveId,chunkIndex:L,content:e[L].content,charOffset:e[L].charOffset,tokenCount:e[L].tokenCount}).returning({id:T.contentChunks.id}).get();E.push(D.id)}let y=e.map((L)=>L.content),N=await n.embedBatch(y),I=i.prepare("INSERT INTO chunk_vectors(chunk_id, embedding) VALUES (?, ?)");for(let L=0;L<E.length;L++){let D=new Float32Array(N[L]);I.run(E[L],D)}t.update(T.files).set({embeddingStatus:"indexed"}).where(jt(yt(T.files.path,o.path),yt(T.files.driveId,o.driveId))).run()}catch(e){throw t.update(T.files).set({embeddingStatus:"failed"}).where(jt(yt(T.files.path,o.path),yt(T.files.driveId,o.driveId))).run(),e}}function vt(t,n,o){if(!n)return;IT.acquire().then(async(i)=>{try{await Xn(t,n,o)}catch(e){console.error("Embedding failed",{path:o.path,error:e})}finally{i()}})}var IT;var Gt=g(()=>{B();IT=new ho(2)});async function zo(t,n){let o=l(t.orgId,t.driveId,n.path),i=n.content,e=Buffer.byteLength(i);if(e>gT)throw new j(`File size ${(e/1024/1024).toFixed(1)}MB exceeds the 10MB limit`,{field:"content",suggestion:"Split large files into smaller chunks"});if(n.expectedVersion!==void 0){let N=await dn(t,n.path)-1;if(N!==n.expectedVersion)throw new tt(`Expected version ${n.expectedVersion} but file is at version ${N}`,{path:n.path,suggestion:"Re-read the file to get the current version and retry"})}let u=await t.s3.putObject(o,i),E=await Q(t,{path:n.path,s3VersionId:u.versionId??"",operation:"write",message:n.message,size:e,etag:u.etag});return Nt(t.db,{path:n.path,driveId:t.driveId,content:i}),vt(t.db,t.embeddingProvider??null,{path:n.path,driveId:t.driveId,content:i}),{version:E,path:n.path,size:e}}var gT=10485760;var mo=g(()=>{Y();Y();Gt();K()});async function co(t,n){let o=l(t.orgId,t.driveId,n.path),i;try{i=(await t.s3.getObject(o)).body}catch(D){if(D?.name==="NoSuchKey"||D?.$metadata?.httpStatusCode===404)throw new X(`File not found: ${n.path}`,{path:n.path});throw D}let u=new TextDecoder().decode(i).split(`
+`),E=u.length,y=n.offset??0,N=n.limit??OT,I=u.slice(y,y+N),L=y+N<E;return{content:I.join(`
+`),totalLines:E,truncated:L}}var OT=200;var xo=g(()=>{Y();K()});async function ao(t,n){let o=l(t.orgId,t.driveId,n.path),i;try{i=(await t.s3.getObject(o)).body}catch(D){if(D?.name==="NoSuchKey"||D?.$metadata?.httpStatusCode===404)throw new X(`File not found: ${n.path}`,{path:n.path});throw D}let e=new TextDecoder().decode(i),u=e.split(n.old_string).length-1;if(u===0)throw new tt(`old_string not found in ${n.path}`,{path:n.path,suggestion:"Verify the exact text you want to replace"});if(u>1)throw new tt(`old_string found ${u} times in ${n.path}, expected exactly 1`,{path:n.path,suggestion:"Provide more surrounding context to make the match unique"});let E=e.replace(n.old_string,n.new_string),y=Buffer.byteLength(E),N=await t.s3.putObject(o,E),I=JSON.stringify({old:n.old_string,new:n.new_string}),L=await Q(t,{path:n.path,s3VersionId:N.versionId??"",operation:"edit",message:n.message,diffSummary:I,size:y,etag:N.etag});return Nt(t.db,{path:n.path,driveId:t.driveId,content:E}),vt(t.db,t.embeddingProvider??null,{path:n.path,driveId:t.driveId,content:E}),{version:L,path:n.path,changes:1}}var so=g(()=>{Y();K();Gt()});async function ti(t,n){let o=l(t.orgId,t.driveId,n.path),i="";try{let N=await t.s3.getObject(o);i=new TextDecoder().decode(N.body)}catch(N){if(N?.name==="NoSuchKey"||N?.$metadata?.httpStatusCode===404)throw new X(`File not found: ${n.path}`,{path:n.path});throw N}let e=i+n.content,u=Buffer.byteLength(e),E=await t.s3.putObject(o,e),y=await Q(t,{path:n.path,s3VersionId:E.versionId??"",operation:"append",message:n.message,size:u,etag:E.etag});return Nt(t.db,{path:n.path,driveId:t.driveId,content:e}),vt(t.db,t.embeddingProvider??null,{path:n.path,driveId:t.driveId,content:e}),{version:y,size:u}}var ni=g(()=>{Y();K();Gt()});import{eq as oi,and as LT,like as DT}from"drizzle-orm";async function ii(t,n){let o=Et(n.path??"/"),i=l(t.orgId,t.driveId,o),{objects:e,prefixes:u}=await t.s3.listObjects(i,{delimiter:"/"}),E=t.db.select().from(T.files).where(LT(oi(T.files.driveId,t.driveId),DT(T.files.path,o+"%"),oi(T.files.isDeleted,!1))).all(),y=new Map(E.map((I)=>[I.path,I])),N=[];for(let I of u){let L=I.slice(i.length).replace(/\/$/,"");if(L)N.push({name:L,type:"directory",size:0})}for(let I of e){let L=I.key.slice(i.length);if(!L)continue;let D=L.endsWith("/"),$=D?L.slice(0,-1):L;if(D)N.push({name:$,type:"directory",size:0});else{let F=o+$,W=y.get(F);N.push({name:$,type:"file",size:W?.size??I.size,author:W?.author,modifiedAt:W?.modifiedAt??I.lastModified})}}return{entries:N}}var ei=g(()=>{B();Y()});import{eq as ui,and as RT}from"drizzle-orm";async function Ti(t,n){let o=l(t.orgId,t.driveId,n.path),i;try{i=await t.s3.headObject(o)}catch(u){if(u?.name==="NotFound"||u?.$metadata?.httpStatusCode===404)throw new X(`File not found: ${n.path}`,{path:n.path});throw u}let e=t.db.select().from(T.files).where(RT(ui(T.files.path,n.path),ui(T.files.driveId,t.driveId))).get();return{path:n.path,size:i.size,contentType:i.contentType,author:e?.author??"unknown",currentVersion:e?.currentVersionId?parseInt(e.currentVersionId):void 0,createdAt:e?.createdAt??new Date,modifiedAt:e?.modifiedAt??i.lastModified??new Date,isDeleted:e?.isDeleted??!1,embeddingStatus:e?.embeddingStatus??void 0}}var Ei=g(()=>{B();Y();K()});import{eq as lt,and as wn}from"drizzle-orm";async function Ni(t,n){let o=l(t.orgId,t.driveId,n.path);await t.s3.deleteObject(o),await Q(t,{path:n.path,s3VersionId:"",operation:"delete"}),jo(t.db,{path:n.path,driveId:t.driveId});let i=t.db.select({id:T.contentChunks.id}).from(T.contentChunks).where(wn(lt(T.contentChunks.filePath,n.path),lt(T.contentChunks.driveId,t.driveId))).all();if(i.length>0){let e=t.db.$client;for(let u of i)e.prepare("DELETE FROM chunk_vectors WHERE chunk_id = ?").run(u.id);t.db.delete(T.contentChunks).where(wn(lt(T.contentChunks.filePath,n.path),lt(T.contentChunks.driveId,t.driveId))).run()}return t.db.update(T.comments).set({isDeleted:!0,updatedAt:new Date}).where(wn(lt(T.comments.path,n.path),lt(T.comments.driveId,t.driveId))).run(),{path:n.path,deleted:!0}}var yi=g(()=>{B();Y()});async function Ii(t,n){let o=l(t.orgId,t.driveId,n.from),i=l(t.orgId,t.driveId,n.to),e=await t.s3.copyObject(o,i),u=await t.s3.headObject(i),E=await Q(t,{path:n.to,s3VersionId:e.versionId??"",operation:"write",message:n.message??`Moved from ${n.from}`,size:u.size,etag:e.etag});return await t.s3.deleteObject(o),await Q(t,{path:n.from,s3VersionId:"",operation:"delete",message:`Moved to ${n.to}`}),{from:n.from,to:n.to,version:E}}var gi=g(()=>{Y()});async function Oi(t,n){let o=l(t.orgId,t.driveId,n.from),i=l(t.orgId,t.driveId,n.to),e=await t.s3.copyObject(o,i),u=await t.s3.headObject(i),E=await Q(t,{path:n.to,s3VersionId:e.versionId??"",operation:"write",message:`Copied from ${n.from}`,size:u.size,etag:e.etag});return{from:n.from,to:n.to,version:E}}var Li=g(()=>{Y()});async function Di(t,n){let o=l(t.orgId,t.driveId,n.path),i=n.lines??_T,e;try{e=(await t.s3.getObject(o)).body}catch(D){if(D?.name==="NoSuchKey"||D?.$metadata?.httpStatusCode===404)throw new X(`File not found: ${n.path}`,{path:n.path});throw D}let E=new TextDecoder().decode(e).split(`
+`),y=E.length,N=Math.max(0,y-i),I=E.slice(N),L=N>0;return{content:I.join(`
+`),totalLines:y,truncated:L}}var _T=20;var Ri=g(()=>{Y();K()});import{eq as _i,and as rT,desc as AT}from"drizzle-orm";async function ri(t,n){let o=n.limit??50;return{versions:t.db.select().from(T.fileVersions).where(rT(_i(T.fileVersions.path,n.path),_i(T.fileVersions.driveId,t.driveId))).orderBy(AT(T.fileVersions.version)).limit(o).all().map((e)=>({version:e.version,author:e.author,createdAt:e.createdAt,operation:e.operation,message:e.message??void 0,diffSummary:e.diffSummary??void 0,size:e.size??void 0}))}}var Ai=g(()=>{B()});import{eq as Ut,and as vi}from"drizzle-orm";import{structuredPatch as vT}from"diff";async function li(t,n){let o=t.db.select().from(T.fileVersions).where(vi(Ut(T.fileVersions.path,n.path),Ut(T.fileVersions.driveId,t.driveId),Ut(T.fileVersions.version,n.v1))).get(),i=t.db.select().from(T.fileVersions).where(vi(Ut(T.fileVersions.path,n.path),Ut(T.fileVersions.driveId,t.driveId),Ut(T.fileVersions.version,n.v2))).get();if(!o||!i)throw new X(`Version ${!o?n.v1:n.v2} not found for ${n.path}`,{path:n.path});if(o.s3VersionId&&i.s3VersionId){let u=l(t.orgId,t.driveId,n.path);try{let[E,y]=await Promise.all([t.s3.getObject(u,o.s3VersionId),t.s3.getObject(u,i.s3VersionId)]),N=new TextDecoder().decode(E.body),I=new TextDecoder().decode(y.body),L=vT(n.path,n.path,N,I),D=[];for(let $ of L.hunks)for(let F of $.lines){let W=F.startsWith("+")?"add":F.startsWith("-")?"remove":"context";D.push({type:W,content:F.slice(1)})}return{changes:D}}catch{}}let e=[];if(i.diffSummary)try{let u=JSON.parse(i.diffSummary);if(u.old)e.push({type:"remove",content:u.old});if(u.new)e.push({type:"add",content:u.new})}catch{e.push({type:"context",content:i.diffSummary})}return{changes:e}}var Ui=g(()=>{B();Y();K()});import{eq as Zn,and as lT}from"drizzle-orm";async function di(t,n){let o=t.db.select().from(T.fileVersions).where(lT(Zn(T.fileVersions.path,n.path),Zn(T.fileVersions.driveId,t.driveId),Zn(T.fileVersions.version,n.version))).get();if(!o)throw new X(`Version ${n.version} not found for ${n.path}`,{path:n.path});if(!o.s3VersionId)throw new s("VERSIONING_REQUIRED","S3 versioning required for revert","Enable S3 versioning on the bucket");let i=l(t.orgId,t.driveId,n.path),e=await t.s3.getObject(i,o.s3VersionId),u=await t.s3.putObject(i,e.body),E=e.body.length;return{version:await Q(t,{path:n.path,s3VersionId:u.versionId??"",operation:"revert",message:`Reverted to version ${n.version}`,size:E,etag:u.etag}),revertedTo:n.version}}var Si=g(()=>{B();Y();K()});import{eq as $n,and as Xi,desc as UT,gte as dT,like as ST}from"drizzle-orm";async function wi(t,n){let o=n.limit??50,i=t.db.select().from(T.fileVersions).where($n(T.fileVersions.driveId,t.driveId)).$dynamic();if(n.path)i=i.where(Xi($n(T.fileVersions.driveId,t.driveId),ST(T.fileVersions.path,n.path+"%")));if(n.since)i=i.where(Xi($n(T.fileVersions.driveId,t.driveId),dT(T.fileVersions.createdAt,n.since)));return{entries:i.orderBy(UT(T.fileVersions.createdAt)).limit(o).all().map((u)=>({path:u.path,version:u.version,author:u.author,createdAt:u.createdAt,operation:u.operation,message:u.message??void 0,diffSummary:u.diffSummary??void 0,size:u.size??void 0}))}}var Zi=g(()=>{B()});async function $i(t,n){let o=new RegExp(n.pattern),i=Et(n.path),u=t.db.$client.prepare("SELECT path, content FROM files_fts WHERE drive_id = ? AND path LIKE ?").all(t.driveId,i+"%"),E=[];for(let y of u){let N=y.content.split(`
+`);for(let I=0;I<N.length;I++)if(o.test(N[I]))E.push({path:y.path,lineNumber:I+1,content:N[I]})}return{matches:E}}var Bi=()=>{};async function Mi(t,n){let i=po(t.db,{pattern:n.pattern,driveId:t.driveId,pathPrefix:n.path}).map((e)=>({path:e.path,snippet:e.snippet,rank:e.rank}));if(i.length===0)return{matches:i,hint:`No exact token matches for "${n.pattern}". Try 'search' for semantic/fuzzy matching.`};return{matches:i}}var Ji=()=>{};import{eq as Bn,and as XT}from"drizzle-orm";async function Yi(t,n){let o=t.embeddingProvider;if(!o)return{results:[],hint:"No embedding provider configured. Set OPENAI_API_KEY or enable local embeddings to use semantic search."};let i=n.limit??10,e=await o.embed(n.query),u=new Float32Array(e),y=t.db.$client.prepare(`SELECT chunk_id, distance
+       FROM chunk_vectors
+       WHERE embedding MATCH ?
+       ORDER BY distance
+       LIMIT ?`).all(u,i*2);if(y.length===0)return{results:[]};let N=[],I=new Set;for(let L of y){let D=t.db.select().from(T.contentChunks).where(Bn(T.contentChunks.id,L.chunk_id)).get();if(!D)continue;if(D.driveId!==t.driveId)continue;if(I.has(D.filePath))continue;I.add(D.filePath);let $=t.db.select().from(T.files).where(XT(Bn(T.files.path,D.filePath),Bn(T.files.driveId,t.driveId))).get();if(N.push({path:D.filePath,score:1/(1+L.distance),snippet:D.content.slice(0,200),author:$?.author,modifiedAt:$?.modifiedAt}),N.length>=i)break}return{results:N}}var Gi=g(()=>{B()});import{eq as pt,and as wT,or as ZT,isNull as $T}from"drizzle-orm";async function Ci(t,n){let o=[pt(T.files.driveId,t.driveId),pt(T.files.isDeleted,!1),ZT(pt(T.files.embeddingStatus,"failed"),$T(T.files.embeddingStatus),pt(T.files.embeddingStatus,"pending"))];if(n.path){let{like:y}=await import("drizzle-orm"),N=n.path.endsWith("/")?n.path:n.path+"/";o.push(y(T.files.path,N+"%"))}let i=t.db.select({path:T.files.path}).from(T.files).where(wT(...o)).all(),e=0,u=0,E=0;for(let y of i){let N=l(t.orgId,t.driveId,y.path);try{let I=await t.s3.getObject(N),L=new TextDecoder().decode(I.body);if(Nt(t.db,{path:y.path,driveId:t.driveId,content:L}),t.embeddingProvider)await Xn(t.db,t.embeddingProvider,{path:y.path,driveId:t.driveId,content:L});else{E++;continue}e++}catch(I){console.error(`Reindex failed for ${y.path}:`,I),u++}}return{reindexed:e,failed:u,skipped:E}}var Fi=g(()=>{B();Y();Gt()});import{eq as Qi,and as BT,like as MT}from"drizzle-orm";async function fi(t,n){let o=Et(n.path??"/"),i=l(t.orgId,t.driveId,o),{objects:e}=await t.s3.listObjects(i),u=t.db.select().from(T.files).where(BT(Qi(T.files.driveId,t.driveId),MT(T.files.path,o+"%"),Qi(T.files.isDeleted,!1))).all(),E=new Map(u.map((N)=>[N.path,N])),y=[];for(let N of e){let I=N.key.slice(i.length);if(!I)continue;let L=I.split("/").filter(Boolean);if(L.length===0)continue;if(n.depth!==void 0&&L.length>n.depth)continue;let D=y;for(let $=0;$<L.length;$++){let F=L[$],W=$===L.length-1,Kt=!W||I.endsWith("/");if(Kt&&!W){let G=D.find((q)=>q.name===F&&q.type==="directory");if(!G)G={name:F,type:"directory",children:[]},D.push(G);if(!G.children)G.children=[];D=G.children}else if(Kt&&W){let G=D.find((q)=>q.name===F&&q.type==="directory");if(!G)G={name:F,type:"directory",children:[]},D.push(G)}else{let G=o+L.slice(0,$+1).join("/"),q=E.get(G),_n={name:F,type:"file",size:q?.size??N.size};if(q?.author)_n.author=q.author;if(q?.modifiedAt??N.lastModified)_n.modifiedAt=q?.modifiedAt??N.lastModified;D.push(_n)}}}return{tree:y}}var Pi=g(()=>{B();Y()});import{eq as Hi,and as JT,like as YT}from"drizzle-orm";function GT(t){let n="",o=0;while(o<t.length){let i=t[o];if(i==="*")if(t[o+1]==="*"){if(n+=".*",o+=2,t[o]==="/")o++}else n+="[^/]*",o++;else if(i==="?")n+="[^/]",o++;else if(".+^${}()|[]\\".includes(i))n+="\\"+i,o++;else n+=i,o++}return new RegExp("^"+n+"$")}async function Wi(t,n){let o=n.path?Et(n.path):"/",i=l(t.orgId,t.driveId,o),{objects:e}=await t.s3.listObjects(i),u=t.db.select().from(T.files).where(JT(Hi(T.files.driveId,t.driveId),YT(T.files.path,o+"%"),Hi(T.files.isDeleted,!1))).all(),E=new Map(u.map((I)=>[I.path,I])),y=GT(n.pattern),N=[];for(let I of e){let L=I.key.slice(i.length);if(!L||L.endsWith("/"))continue;if(y.test(L)){let D=o+L,$=E.get(D);N.push({path:D,size:$?.size??I.size,modifiedAt:$?.modifiedAt??I.lastModified})}}return{matches:N}}var Ki=g(()=>{B();Y()});import{eq as U,and as ot,sql as Mn,desc as Vi}from"drizzle-orm";function Jn(t,n){t.db.insert(T.events).values({id:crypto.randomUUID(),orgId:t.orgId,type:n.type,resourceType:n.resourceType,resourceId:n.resourceId,actor:t.userId,target:n.target??null,status:"created",metadata:n.metadata?JSON.stringify(n.metadata):null,createdAt:new Date}).run()}function bt(t){return{id:t.id,parentId:t.parentId??void 0,path:t.path,lineStart:t.lineStart??void 0,lineEnd:t.lineEnd??void 0,quotedContent:t.quotedContent??void 0,body:t.body,author:t.author,resolved:t.resolved??!1,resolvedBy:t.resolvedBy??void 0,resolvedAt:t.resolvedAt??void 0,replyCount:t.replyCount??0,createdAt:t.createdAt,updatedAt:t.updatedAt}}async function ht(t,n){let o=new Date,i=crypto.randomUUID(),e=n.path;if(n.parentId){let E=t.db.select().from(T.comments).where(ot(U(T.comments.id,n.parentId),U(T.comments.isDeleted,!1))).get();if(!E)throw new X("Parent comment not found",{suggestion:"Check that the parent comment ID is correct and not deleted"});if(E.parentId)throw new j("Cannot reply to a reply \u2014 only root comments accept replies",{suggestion:"Reply to the root comment instead"});if(!e)e=E.path}if(!e)throw new j("path is required for root comments",{field:"path"});let u=t.db.select({id:T.fileVersions.id}).from(T.fileVersions).where(ot(U(T.fileVersions.path,e),U(T.fileVersions.driveId,t.driveId))).orderBy(Vi(T.fileVersions.id)).limit(1).get();return t.db.insert(T.comments).values({id:i,parentId:n.parentId??null,orgId:t.orgId,driveId:t.driveId,path:e,lineStart:n.lineStart??null,lineEnd:n.lineEnd??null,quotedContent:n.quotedContent??null,fileVersionId:u?.id??null,body:n.body,author:t.userId,resolved:!1,createdAt:o,updatedAt:o,isDeleted:!1}).run(),Jn(t,{type:"comment_created",resourceType:"comment",resourceId:i,metadata:{path:e,parentId:n.parentId}}),{id:i,path:e,body:n.body,parentId:n.parentId,lineStart:n.lineStart,lineEnd:n.lineEnd,author:t.userId,createdAt:o}}async function zt(t,n){let o=[U(T.comments.driveId,t.driveId),U(T.comments.isDeleted,!1)];if(n.path)o.push(U(T.comments.path,n.path));if(n.parentId)o.push(U(T.comments.parentId,n.parentId));else if(n.parentId===void 0&&!n.resolved)o.push(Mn`${T.comments.parentId} IS NULL`),o.push(U(T.comments.resolved,!1));else if(n.parentId===void 0&&n.resolved)o.push(Mn`${T.comments.parentId} IS NULL`);if(n.orgId)o.push(U(T.comments.orgId,n.orgId));let i=n.limit??50,e=n.offset??0;return{comments:t.db.select().from(T.comments).where(ot(...o)).orderBy(Vi(T.comments.createdAt)).limit(i).offset(e).all().map((y)=>{let I=t.db.select().from(T.comments).where(ot(U(T.comments.parentId,y.id),U(T.comments.isDeleted,!1))).orderBy(T.comments.createdAt).all().map((L)=>bt({...L,replyCount:0}));return{...bt({...y,replyCount:I.length}),replies:I}})}}async function mt(t,n){let o=t.db.select().from(T.comments).where(ot(U(T.comments.id,n.id),U(T.comments.isDeleted,!1))).get();if(!o)throw new X("Comment not found",{suggestion:"Check that the comment ID is correct"});let i=t.db.select({count:Mn`count(*)`}).from(T.comments).where(ot(U(T.comments.parentId,o.id),U(T.comments.isDeleted,!1))).get(),e=bt({...o,replyCount:i?.count??0}),E=t.db.select().from(T.comments).where(ot(U(T.comments.parentId,n.id),U(T.comments.isDeleted,!1))).orderBy(T.comments.createdAt).all().map((y)=>bt({...y,replyCount:0}));return{comment:e,replies:E}}async function ct(t,n){let o=t.db.select().from(T.comments).where(ot(U(T.comments.id,n.id),U(T.comments.isDeleted,!1))).get();if(!o)throw new X("Comment not found",{suggestion:"Check that the comment ID is correct"});if(o.author!==t.userId)throw new k("You can only edit your own comments",{suggestion:"Only the comment author can update it"});let i=new Date;return t.db.update(T.comments).set({body:n.body,updatedAt:i}).where(U(T.comments.id,n.id)).run(),{id:n.id,body:n.body,updatedAt:i}}async function xt(t,n){let o=t.db.select().from(T.comments).where(ot(U(T.comments.id,n.id),U(T.comments.isDeleted,!1))).get();if(!o)throw new X("Comment not found",{suggestion:"Check that the comment ID is correct"});if(o.author!==t.userId)throw new k("You can only delete your own comments",{suggestion:"Only the comment author can delete it"});let i=new Date;if(t.db.update(T.comments).set({isDeleted:!0,updatedAt:i}).where(U(T.comments.id,n.id)).run(),!o.parentId)t.db.update(T.comments).set({isDeleted:!0,updatedAt:i}).where(U(T.comments.parentId,n.id)).run();return Jn(t,{type:"comment_deleted",resourceType:"comment",resourceId:n.id}),{deleted:!0}}async function at(t,n){let o=t.db.select().from(T.comments).where(ot(U(T.comments.id,n.id),U(T.comments.isDeleted,!1))).get();if(!o)throw new X("Comment not found",{suggestion:"Check that the comment ID is correct"});if(o.parentId)throw new j("Cannot resolve a reply \u2014 only root comments can be resolved",{suggestion:"Resolve the parent comment instead"});let i=new Date,e=n.resolved?i:null,u=n.resolved?t.userId:null;return t.db.update(T.comments).set({resolved:n.resolved,resolvedBy:u,resolvedAt:e,updatedAt:i}).where(U(T.comments.id,n.id)).run(),Jn(t,{type:n.resolved?"comment_resolved":"comment_reopened",resourceType:"comment",resourceId:n.id}),{id:n.id,resolved:n.resolved,resolvedBy:u??void 0,resolvedAt:e??void 0}}var qi=g(()=>{B();K()});import{z as O}from"zod";async function It(t,n,o,i){let e=Yn[n];if(!e)throw Error(`Unknown operation: ${n}`);if(!i?.skipAuth){let E=Jt(n);Yt(t.db,{userId:t.userId,driveId:t.driveId,requiredRole:E})}let u=e.schema.parse(o);return e.handler(t,u)}function dt(){return Object.keys(Yn)}function gt(t){return Yn[t]}var Yn;var Gn=g(()=>{kt();mo();xo();so();ni();ei();Ei();yi();gi();Li();Ri();Ai();Ui();Si();Zi();Bi();Ji();Gi();Fi();Pi();Ki();qi();Yn={write:{description:"Write or overwrite a file. Creates the file if it doesn't exist, or creates a new version. Use expectedVersion for optimistic concurrency. Returns { version, path, size }.",handler:zo,schema:O.object({path:O.string(),content:O.string(),message:O.string().optional(),expectedVersion:O.number().int().optional()})},cat:{description:"Read file content with optional pagination via offset/limit. Returns { content, totalLines, truncated }.",handler:co,schema:O.object({path:O.string(),offset:O.number().int().min(0).optional(),limit:O.number().int().min(1).optional()})},edit:{description:"Replace a specific string in a file (surgical find-and-replace). Captures the edit intent as a diff summary in version history. Returns { version, path, changes }.",handler:ao,schema:O.object({path:O.string(),old_string:O.string(),new_string:O.string(),message:O.string().optional()})},append:{description:"Append content to the end of an existing file. Creates a new version. Returns { version, size }.",handler:ti,schema:O.object({path:O.string(),content:O.string(),message:O.string().optional()})},ls:{description:"List immediate children of a directory. Returns { entries } where each entry has name, type (file/directory), size, author, modifiedAt.",handler:ii,schema:O.object({path:O.string().optional()})},stat:{description:"Get file metadata without reading content. Returns path, size, contentType, author, currentVersion, createdAt, modifiedAt, isDeleted, embeddingStatus.",handler:Ti,schema:O.object({path:O.string()})},rm:{description:"Delete a file. Removes from S3, cleans up FTS5 index and vector embeddings. Returns { path, deleted }.",handler:Ni,schema:O.object({path:O.string()})},mv:{description:"Move or rename a file. Preserves version history at the new path. Returns { from, to, version }.",handler:Ii,schema:O.object({from:O.string(),to:O.string(),message:O.string().optional()})},cp:{description:"Copy a file using server-side S3 copy. Creates a new version at the destination. Returns { from, to, version }.",handler:Oi,schema:O.object({from:O.string(),to:O.string()})},tail:{description:"Read the last N lines of a file (default 20). Returns { content, totalLines, truncated }.",handler:Di,schema:O.object({path:O.string(),lines:O.number().int().min(1).optional()})},log:{description:"Show version history for a file. Returns { versions } with version number, author, timestamp, operation type, message, and diff summary.",handler:ri,schema:O.object({path:O.string(),limit:O.number().int().min(1).optional()})},diff:{description:"Show the diff between two versions of a file. Specify v1 and v2 version numbers. Returns { changes } as add/remove/context hunks.",handler:li,schema:O.object({path:O.string(),v1:O.number().int(),v2:O.number().int()})},revert:{description:"Revert a file to a previous version. Creates a new version with the old content. 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Date;t.insert(T.orgs).values({id:o,name:n.name,isPersonal:n.isPersonal??!1,createdAt:i}).run(),t.insert(T.orgMembers).values({orgId:o,userId:n.userId,role:"admin"}).run();let e=et(t,{orgId:o,name:"default",isDefault:!0});return t.insert(T.driveMembers).values({driveId:e.id,userId:n.userId,role:"admin"}).run(),{id:o,name:n.name}}function C(t,n){return t.select({orgId:T.orgMembers.orgId,role:T.orgMembers.role,name:T.orgs.name,isPersonal:T.orgs.isPersonal}).from(T.orgMembers).innerJoin(T.orgs,Ct(T.orgMembers.orgId,T.orgs.id)).where(Ct(T.orgMembers.userId,n)).all().map((i)=>({id:i.orgId,name:i.name,role:i.role,isPersonal:i.isPersonal}))}function Ft(t,n){let o=t.select().from(T.orgs).where(Ct(T.orgs.id,n)).get();if(!o)return null;return{id:o.id,name:o.name,isPersonal:o.isPersonal}}function Rt(t,n){let o=t.select().from(T.users).where(Ct(T.users.email,n.email)).get();if(!o)throw Error(`User with email ${n.email} not found`);t.insert(T.orgMembers).values({orgId:n.orgId,userId:o.id,role:n.role}).onConflictDoUpdate({target:[T.orgMembers.orgId,T.orgMembers.userId],set:{role:n.role}}).run();let i=t.select().from(T.drives).where(Ct(T.drives.orgId,n.orgId)).get();if(i)t.insert(T.driveMembers).values({driveId:i.id,userId:o.id,role:n.role}).onConflictDoUpdate({target:[T.driveMembers.driveId,T.driveMembers.userId],set:{role:n.role}}).run()}var fn=g(()=>{B();Qn()});import{eq as ji}from"drizzle-orm";function pi(t){let n=new Bun.CryptoHasher("sha256");return n.update(t),n.digest("hex")}function CT(){let t=new Uint8Array(32);return crypto.getRandomValues(t),`af_${Array.from(t,(o)=>o.toString(16).padStart(2,"0")).join("")}`}function FT(){return crypto.randomUUID()}function p(t,n){let o=FT(),i=CT(),e=pi(i),u=new Date;return t.insert(T.users).values({id:o,email:n.email,apiKeyHash:e,createdAt:u}).run(),Dt(t,{name:n.email.split("@")[0],userId:o,isPersonal:!0}),{user:{id:o,email:n.email},apiKey:i}}function b(t,n){let o=pi(n),i=t.select().from(T.users).where(ji(T.users.apiKeyHash,o)).get();if(!i)return null;return{id:i.id,email:i.email}}function Pn(t,n){let o=t.select().from(T.users).where(ji(T.users.email,n)).get();if(!o)return null;return{id:o.id,email:o.email}}var Hn=g(()=>{B();fn()});import{eq as Ot,and as Wn}from"drizzle-orm";function ut(t,n){if(n.driveId){let u=t.select().from(T.drives).where(Ot(T.drives.id,n.driveId)).get();if(!u)throw Error(`Drive not found: ${n.driveId}`);let E=nt(t,n.userId,n.driveId);if(!E)throw Error("You do not have access to this drive");return{orgId:u.orgId,driveId:n.driveId,role:E}}if(n.orgId){let u=t.select().from(T.drives).where(Wn(Ot(T.drives.orgId,n.orgId),Ot(T.drives.isDefault,!0))).get();if(!u)throw Error(`No default drive for org: ${n.orgId}`);let E=nt(t,n.userId,u.id);if(!E)throw Error("You do not have access to this drive");return{orgId:n.orgId,driveId:u.id,role:E}}let o=t.select({orgId:T.orgMembers.orgId}).from(T.orgMembers).innerJoin(T.orgs,Ot(T.orgMembers.orgId,T.orgs.id)).where(Wn(Ot(T.orgMembers.userId,n.userId),Ot(T.orgs.isPersonal,!0))).get();if(!o)throw Error("No personal org found for user");let i=t.select().from(T.drives).where(Wn(Ot(T.drives.orgId,o.orgId),Ot(T.drives.isDefault,!0))).get();if(!i)throw Error("No default drive found");let e=nt(t,n.userId,i.id);if(!e)throw Error("You do not have access to your default drive");return{orgId:o.orgId,driveId:i.id,role:e}}var bi=g(()=>{B();kt()});function Qt(t){let n=Z();if(n.auth.apiKey){if(b(t,n.auth.apiKey))return{apiKey:n.auth.apiKey}}console.error("[agent-fs] No local user found, creating one...");let o=p(t,{email:"local@agent-fs.local"});return v("auth.apiKey",o.apiKey),console.error("[agent-fs] Local user created automatically."),{apiKey:o.apiKey}}var hi=g(()=>{Zt();Hn()});var zi=g(()=>{Hn();fn();Qn();kt();bi();hi()});var ci;var mi=g(()=>{ci={name:"agent-fs",version:"0.2.0",private:!0,workspaces:["packages/*"],scripts:{typecheck:"tsc --build",test:"bun test packages/*/src/","test:coverage":"bun test --coverage packages/*/src/",build:"cd packages/cli && bun run build:npm"},devDependencies:{"bun-types":"^1.2.0",typescript:"^5.7.0",yaml:"^2.8.2","zod-to-json-schema":"^3.25.1"}}});var H;var Kn=g(()=>{mi();H=ci.version});var ai={};rt(ai,{LocalEmbeddingProvider:()=>xi});import{join as fT}from"path";import{mkdirSync as PT,existsSync as HT}from"fs";class xi{name="local";dimensions=768;llama=null;model=null;embeddingContext=null;initPromise=null;async init(){if(this.embeddingContext)return;if(this.initPromise)return this.initPromise;return this.initPromise=this._doInit(),this.initPromise}async _doInit(){let{getLlama:t,resolveModelFile:n}=await import("node-llama-cpp");this.llama=await t();let o=fT(m(),"models");if(!HT(o))PT(o,{recursive:!0});console.error("[agent-fs] Resolving local embedding model...");let i=await n(WT,o);console.error("[agent-fs] Model ready:",i),this.model=await this.llama.loadModel({modelPath:i}),this.embeddingContext=await this.model.createEmbeddingContext()}async embed(t){await this.init();let n=await this.embeddingContext.getEmbeddingFor(t);return Array.from(n.vector)}async embedBatch(t){await this.init();let n=[];for(let o of t){let i=await this.embeddingContext.getEmbeddingFor(o);n.push(Array.from(i.vector))}return n}async dispose(){if(this.embeddingContext)await this.embeddingContext.dispose(),this.embeddingContext=null;if(this.model)await this.model.dispose(),this.model=null;this.initPromise=null}}var WT="hf:nomic-ai/nomic-embed-text-v1.5-GGUF:Q8_0";var si=g(()=>{Zt()});var Vn={};rt(Vn,{OpenAIEmbeddingProvider:()=>te});import KT from"openai";class te{name="openai";dimensions=768;client;constructor(t){this.client=new KT({apiKey:t})}async embed(t){return(await this.client.embeddings.create({model:"text-embedding-3-small",input:t,dimensions:768})).data[0].embedding}async embedBatch(t){return(await this.client.embeddings.create({model:"text-embedding-3-small",input:t,dimensions:768})).data.sort((o,i)=>o.index-i.index).map((o)=>o.embedding)}}var qn=()=>{};var kn={};rt(kn,{GeminiEmbeddingProvider:()=>ne});import{GoogleGenAI as VT}from"@google/genai";class ne{name="gemini";dimensions=768;client;constructor(t){this.client=new VT({apiKey:t})}async embed(t){return(await this.client.models.embedContent({model:"gemini-embedding-001",contents:t,config:{outputDimensionality:768}})).embeddings[0].values}async embedBatch(t){let n=[];for(let o of t){let i=await this.client.models.embedContent({model:"gemini-embedding-001",contents:o,config:{outputDimensionality:768}});n.push(i.embeddings[0].values)}return n}}var jn=()=>{};async function oe(t){switch(t.provider){case"local":{let{LocalEmbeddingProvider:n}=await Promise.resolve().then(() => (si(),ai));return new n}case"openai":{if(!t.apiKey)throw Error("OpenAI API key required. 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+Start a daemon with \`agent-fs daemon start\` or set AGENT_FS_API_URL to connect to a remote server.`),process.exit(1)}Mo=new VE({name:"agent-fs",version:H},{capabilities:{tools:{}}});Mo.setRequestHandler(pE,async()=>{return await Bo.listTools()});Mo.setRequestHandler(bE,async(t)=>{return await Bo.callTool(t.params)});zE=new qE;await Mo.connect(zE);console.error("[agent-fs] MCP proxy connected to "+$o)});import{z as nu}from"zod";function ou(t,n){let o=dt();for(let i of o){let e=gt(i);if(!e)continue;t.tool(i,e.description,e.schema instanceof nu.ZodObject?e.schema.shape:{params:nu.any()},async(u,E)=>{let y=n(E),N=await It(y,i,u);return{content:[{type:"text",text:JSON.stringify(N,null,2)}]}})}}var iu=g(()=>{M()});import{McpServer as cE}from"@modelcontextprotocol/sdk/server/mcp.js";function eu(t){let{db:n,s3:o,embeddingProvider:i}=t,e=new cE({name:"agent-fs",version:H}),u=(E)=>{let y=E.authInfo;if(!y?.extra?.user)throw Error("No auth context \u2014 MCP must be accessed through the HTTP 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Kt=it(n,W.id);return{orgId:W.id,orgName:W.name,drives:Kt.map((G)=>({driveId:G.id,driveName:G.name,role:nt(n,I,G.id)}))}}),$=y.authInfo?.extra?.user?.email,F={userId:I,...$?{email:$}:{},activeOrg:N.orgId,activeDrive:N.driveId,memberships:D};return{content:[{type:"text",text:JSON.stringify(F,null,2)}]}}),e}var uu=g(()=>{M();iu()});function Tu(t){return async(n,o)=>{let i=new URL(n.req.url).pathname;if(xE.some((y)=>i===y||i.startsWith(y)))return o();let e=n.req.header("Authorization");if(!e?.startsWith("Bearer "))return n.json({error:"UNAUTHORIZED",message:"Missing or invalid Authorization header",suggestion:"Include 'Authorization: Bearer <api_key>' header"},401);let u=e.slice(7),E=b(t,u);if(!E)return n.json({error:"UNAUTHORIZED",message:"Invalid API key",suggestion:"Register with POST /auth/register"},401);return n.set("user",E),o()}}var xE;var Eu=g(()=>{M();xE=["/auth/register","/health"]});function aE(t){if(t instanceof X)return 404;if(t instanceof k)return 403;if(t instanceof tt)return 409;if(t instanceof Mt)return 503;if(t instanceof j)return 400;if("code"in t)return 400;return 500}function Nu(t,n){let o=aE(t);if("toJSON"in t&&typeof t.toJSON==="function")return n.json(t.toJSON(),o);return n.json({error:"INTERNAL_ERROR",message:t.message},o)}var yu=g(()=>{M()});function Dn(t){let n=new Map;return setInterval(()=>{let o=Date.now()-60000;for(let[i,e]of n){let u=e.filter((E)=>E>o);if(u.length===0)n.delete(i);else n.set(i,u)}},300000).unref(),async(o,i)=>{let e=o.req.header("authorization")??"",u=e.startsWith("Bearer ")?e.slice(7):o.req.header("x-forwarded-for")??"unknown",E=Date.now(),y=E-60000,N=(n.get(u)??[]).filter((I)=>I>y);if(N.length>=t){let I=N[0],L=Math.ceil((I+60000-E)/1000);return o.header("Retry-After",String(L)),o.json({error:"RATE_LIMITED",message:"Too many requests"},429)}N.push(E),n.set(u,N),await i()}}import{Hono as sE}from"hono";function Iu(t){let n=new sE;return n.post("/register",async(o)=>{let{email:i}=await o.req.json();if(!i||typeof i!=="string")return o.json({error:"VALIDATION_ERROR",message:"email is required"},400);try{let e=p(t,{email:i}),u=C(t,e.user.id);return o.json({apiKey:e.apiKey,userId:e.user.id,orgId:u[0]?.id})}catch(e){if(e instanceof Error&&e.message.includes("UNIQUE"))return o.json({error:"CONFLICT",message:"User with this email already exists"},409);throw e}}),n.get("/me",(o)=>{let i=o.get("user");try{let e=ut(t,{userId:i.id});return o.json({userId:i.id,email:i.email,defaultOrgId:e.orgId,defaultDriveId:e.driveId})}catch{return o.json({userId:i.id,email:i.email,defaultOrgId:null,defaultDriveId:null})}}),n}var gu=g(()=>{M()});import{Hono as tN}from"hono";function Ou(t,n,o=null){let i=new tN;return i.post("/:orgId/ops",async(e)=>{let u=e.get("user"),E=e.req.param("orgId"),y=await e.req.json(),{op:N,...I}=y;if(!N)return e.json({error:"VALIDATION_ERROR",message:"op is required in request body"},400);let L=I.driveId||I.drive_id;delete I.driveId,delete I.drive_id;let D=ut(t,{userId:u.id,orgId:E,driveId:L}),$={db:t,s3:n,orgId:D.orgId,driveId:D.driveId,userId:u.id,embeddingProvider:o},F=await It($,N,I);return e.json(F)}),i}var Lu=g(()=>{M()});import{Hono as nN}from"hono";function Du(t){let n=new nN;return n.get("/",(o)=>{let i=o.get("user"),e=C(t,i.id);return o.json({orgs:e})}),n.post("/",async(o)=>{let i=o.get("user"),{name:e}=await o.req.json(),u=Dt(t,{name:e,userId:i.id});return o.json(u,201)}),n.get("/:orgId",(o)=>{let i=o.req.param("orgId"),e=Ft(t,i);if(!e)return o.json({error:"NOT_FOUND",message:"Org not found"},404);return o.json(e)}),n.get("/:orgId/drives",(o)=>{let i=o.req.param("orgId"),e=it(t,i);return o.json({drives:e})}),n.post("/:orgId/drives",async(o)=>{let i=o.req.param("orgId"),{name:e}=await o.req.json(),u=et(t,{orgId:i,name:e});return o.json(u,201)}),n.post("/:orgId/members/invite",async(o)=>{let i=o.req.param("orgId"),{email:e,role:u}=await o.req.json();return Rt(t,{orgId:i,email:e,role:u}),o.json({ok:!0})}),n}var Ru=g(()=>{M()});import{Hono as oN}from"hono";function _u(){let t=new oN;return t.get("/openapi.json",(n)=>{return n.json(yn())}),t}var ru=g(()=>{M()});import{Hono as iN}from"hono";import{cors as Au}from"hono/cors";import{bodyLimit as eN}from"hono/body-limit";import{WebStandardStreamableHTTPServerTransport as uN}from"@modelcontextprotocol/sdk/server/webStandardStreamableHttp.js";function vu(t,n,o=null){let i=new iN,e=Z(),u=e.server?.cors?.origins??["*"];if(u.length===1&&u[0]==="*")i.use("*",Au());else i.use("*",Au({origin:u}));i.use("*",eN({maxSize:52428800})),i.use("*",Tu(t));let E=e.server?.rateLimit?.requestsPerMinute??60;if(E>0)i.use("/orgs/*",Dn(E)),i.use("/auth/*",Dn(E)),i.use("/mcp",Dn(E));return i.onError((y,N)=>Nu(y,N)),i.get("/health",(y)=>y.json({ok:!0,version:H})),i.all("/mcp",async(y)=>{let N=y.get("user"),I=new uN({sessionIdGenerator:void 0,enableJsonResponse:!0});return await 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+`)}function RE(t){let n=[];if(n.push(`reindexed: ${t.reindexed??0}`),t.failed)n.push(`failed: ${t.failed}`);if(t.skipped)n.push(`skipped: ${t.skipped}`);return n.join(", ")}var _E={ls:xT,cat:We,stat:aT,log:sT,write:tE,edit:nE,append:oE,rm:iE,mv:eE,cp:uE,tree:TE,grep:EE,fts:NE,search:yE,glob:IE,diff:gE,tail:OE,revert:LE,recent:DE,reindex:RE};function rE(t,n){let o=_E[t];if(o)return o(n);return JSON.stringify(n,null,2)}function Ke(t,n,o){if(o)console.log(JSON.stringify(n,null,2));else console.log(rE(t,n))}var vE=[{name:"write",args:[{name:"path",required:!0}],options:[{flag:"--content <text>",description:"File content (reads stdin if omitted)"},{flag:"-m, --message <msg>",description:"Version message"},{flag:"--expected-version <n>",description:"Fail if file is not at this version (optimistic concurrency)"}]},{name:"cat",args:[{name:"path",required:!0}],options:[{flag:"--offset <n>",description:"Line offset"},{flag:"--limit <n>",description:"Max lines"}]},{name:"edit",args:[{name:"path",required:!0}],options:[{flag:"--old <string>",description:"Text to replace"},{flag:"--new <string>",description:"Replacement text"},{flag:"-m, --message <msg>",description:"Version message"}]},{name:"append",args:[{name:"path",required:!0}],options:[{flag:"--content <text>",description:"Content to append"},{flag:"-m, --message <msg>",description:"Version message"}]},{name:"ls",args:[{name:"path",required:!1}],options:[]},{name:"stat",args:[{name:"path",required:!0}],options:[]},{name:"rm",args:[{name:"path",required:!0}],options:[]},{name:"mv",args:[{name:"from",required:!0},{name:"to",required:!0}],options:[{flag:"-m, --message <msg>",description:"Version message"}]},{name:"cp",args:[{name:"from",required:!0},{name:"to",required:!0}],options:[]},{name:"tail",args:[{name:"path",required:!0}],options:[{flag:"-n, --lines <n>",description:"Number of lines (default: 20)"}]},{name:"log",args:[{name:"path",required:!0}],options:[{flag:"--limit <n>",description:"Max entries"}]},{name:"diff",args:[{name:"path",required:!0}],options:[{flag:"--v1 <n>",description:"First version"},{flag:"--v2 <n>",description:"Second version"}]},{name:"revert",args:[{name:"path",required:!0}],options:[{flag:"--to <n>",description:"Version to revert to"}]},{name:"recent",args:[{name:"path",required:!1}],options:[{flag:"--since <duration>",description:"Time filter (e.g., 1h, 24h)"},{flag:"--limit <n>",description:"Max entries"}]},{name:"grep",args:[{name:"pattern",required:!0},{name:"path",required:!0}],options:[]},{name:"fts",args:[{name:"pattern",required:!0}],options:[{flag:"--path <prefix>",description:"Path prefix filter"}]},{name:"search",args:[{name:"query",required:!0}],options:[{flag:"--limit <n>",description:"Max results"}]},{name:"reindex",args:[],options:[{flag:"--path <prefix>",description:"Path prefix filter"}]},{name:"tree",args:[{name:"path",required:!1}],options:[{flag:"--depth <n>",description:"Max recursion depth"}]},{name:"glob",args:[{name:"pattern",required:!0}],options:[{flag:"--path <prefix>",description:"Path prefix filter"}]}];function Ve(t,n,o){for(let i of vE){let e=gt(i.name),u=new AE(i.name).description(e?.description??i.name);for(let E of i.args)if(E.required)u.argument(`<${E.name}>`);else u.argument(`[${E.name}]`);for(let E of i.options)u.option(E.flag,E.description);u.action(async(...E)=>{let N={...E[E.length-2]};for(let I=0;I<i.args.length;I++)if(E[I]!==void 0)N[i.args[I].name]=E[I];if((i.name==="write"||i.name==="append")&&!N.content)if(!process.stdin.isTTY)N.content=await Bun.stdin.text();else console.error("Error: --content required (or pipe content via stdin)"),process.exit(1);if(N["expected-version"]!==void 0)N.expectedVersion=N["expected-version"],delete N["expected-version"];if(N.old!==void 0)N.old_string=N.old,delete N.old;if(N.new!==void 0)N.new_string=N.new,delete N.new;if(i.name==="revert"&&N.to!==void 0)N.version=N.to,delete N.to;for(let I of["offset","limit","lines","v1","v2","version","expectedVersion","depth"])if(N[I]!==void 0)N[I]=parseInt(N[I]);try{let I=await n.callOp(await o(),i.name,N);Ke(i.name,I,t.opts().json)}catch(I){if(I?.cause?.code==="ECONNREFUSED"||I?.message?.includes("fetch failed"))console.error(`Cannot connect to agent-fs daemon.
+Start with: agent-fs daemon start
+Or set AGENT_FS_API_URL to connect to a remote server.`),process.exit(1);console.error(`Error: ${I.message}`),process.exit(1)}}),t.addCommand(u)}}M();import{Command as lE}from"commander";function ke(t){let n=new lE("auth").description("Authentication commands");return n.command("register").argument("<email>","Email address").description("Register a new user").action(async(o)=>{try{let i=await t.post("/auth/register",{email:o});qe(i,t)}catch{try{let i=a(),e=p(i,{email:o}),u=C(i,e.user.id);qe({apiKey:e.apiKey,userId:e.user.id,orgId:u[0]?.id},t)}catch(i){if(i.message?.includes("UNIQUE"))console.error("Error: User with this email already exists.");else console.error(`Error: ${i.message}`);process.exit(1)}}}),n.command("whoami").description("Show current user info").action(async()=>{try{let o=await t.get("/auth/me");console.log(JSON.stringify(o,null,2))}catch{try{let{getConfig:o,getUserByApiKey:i,createDatabase:e,listUserOrgs:u}=await Promise.resolve().then(() => (M(),He)),E=o();if(!E.auth.apiKey)console.error("Not logged in. Run: agent-fs auth register <email>"),process.exit(1);let y=e(),N=i(y,E.auth.apiKey);if(!N)console.error("Invalid API key in config."),process.exit(1);let I=u(y,N.id);console.log(JSON.stringify({...N,orgs:I},null,2))}catch(o){console.error(`Error: ${o.message}`),process.exit(1)}}}),n}function qe(t,n){console.log("Registered successfully!"),console.log(`API Key: ${t.apiKey}`),console.log(`User ID: ${t.userId}`),console.log(`Org ID: ${t.orgId}`),v("auth.apiKey",t.apiKey),n.setApiKey(t.apiKey),console.log(`
+API key saved to config.`)}import{Command as BE}from"commander";function pe(){let t=new BE("daemon").description("Daemon lifecycle management");return t.command("start").description("Start the agent-fs daemon").action(async()=>{let{startDaemon:n}=await Promise.resolve().then(() => (gn(),In));n()}),t.command("stop").description("Stop the agent-fs daemon").action(async()=>{let{stopDaemon:n}=await Promise.resolve().then(() => (gn(),In));n()}),t.command("status").description("Check daemon status").action(async()=>{let{daemonStatus:n}=await Promise.resolve().then(() => (gn(),In)),o=n();if(o.running)console.log(`Daemon running (PID: ${o.pid})`);else console.log("Daemon is not running")}),t}M();import{Command as ME}from"commander";import{existsSync as be}from"fs";function he(){let t=new ME("config").description("Configuration management");return t.command("get").argument("<key>","Config key (dot notation, e.g., s3.bucket)").description("Get a config value").action((n)=>{let o=Z(),i=n.split("."),e=o;for(let u of i)e=e?.[u];if(e===void 0)console.error(`Key not found: ${n}`),process.exit(1);console.log(typeof e==="object"?JSON.stringify(e,null,2):String(e))}),t.command("set").argument("<key>","Config key").argument("<value>","Config value").description("Set a config value").action((n,o)=>{let i=o;try{i=JSON.parse(o)}catch{}v(n,i),console.log(`Set ${n} = ${JSON.stringify(i)}`)}),t.command("list").description("Show all config").action(()=>{console.log(JSON.stringify(Z(),null,2))}),t.command("validate").description("Check that config, database, S3, and embeddings are healthy").action(async()=>{let n=[],o=Z(),i=be(c());n.push({name:"Config file",ok:i,message:i?c():"Not found \u2014 run `agent-fs onboard`"});let u=["endpoint","bucket","accessKeyId","secretAccessKey"].filter((L)=>!o.s3[L]);if(n.push({name:"S3 config",ok:u.length===0,message:u.length===0?`${o.s3.provider} \u2192 ${o.s3.endpoint}/${o.s3.bucket}`:`Missing: ${u.join(", ")}`}),u.length===0)try{await new Tt(o.s3).listObjects(""),n.push({name:"S3 connectivity",ok:!0,message:"Connected"})}catch(L){n.push({name:"S3 connectivity",ok:!1,message:L.message||"Connection failed"})}let E=be(Lt());n.push({name:"Database",ok:E,message:E?Lt():"Not found \u2014 run `agent-fs onboard`"}),n.push({name:"Auth",ok:!!o.auth.apiKey,message:o.auth.apiKey?"API key configured":"No API key \u2014 run `agent-fs onboard`"});let y=o.embedding.provider,N=!!o.embedding.apiKey||!!process.env.OPENAI_API_KEY||!!process.env.GEMINI_API_KEY;if(y==="openai"||y==="gemini")if(N)try{let L=await St(o.embedding);n.push({name:"Embeddings",ok:!!L,message:L?`${y} ready`:`${y} configured but failed to init`})}catch(L){n.push({name:"Embeddings",ok:!1,message:L.message})}else n.push({name:"Embeddings",ok:!1,message:`${y} selected but no API key`});else n.push({name:"Embeddings",ok:!0,message:"local/disabled (semantic search may be unavailable)"});console.log(`
 agent-fs health check
-`);let d=!0;for(let m of t){let F=m.ok?"\u2713":"\u2717";if(console.log(`  ${F} ${m.name}: ${m.message}`),!m.ok)d=!1}if(console.log(),d)console.log("All checks passed.");else console.log("Some checks failed. Fix the issues above and re-run."),process.exit(1)}),n}import{Command as Yn}from"commander";import{createDatabase as Wn,listDrives as W,createDrive as zn,listUserOrgs as Bn,getUserByApiKey as bn,getConfig as _n,inviteToOrg as Pn}from"@/core";function z(n){let t=new Yn("drive").description("Drive management");return t.command("list").description("List drives in current org").action(async()=>{try{let{db:e,orgId:i}=R(),o=W(e,i);console.log(JSON.stringify({drives:o},null,2))}catch(e){console.error(`Error: ${e.message}`),process.exit(1)}}),t.command("create").argument("<name>","Drive name").description("Create a new drive").action(async(e)=>{try{let{db:i,orgId:o}=R(),a=zn(i,{orgId:o,name:e});console.log(JSON.stringify(a,null,2))}catch(i){console.error(`Error: ${i.message}`),process.exit(1)}}),t.command("current").description("Show current drive context").action(async()=>{try{let{db:e,orgId:i,userId:o}=R(),a=W(e,i),c=a.find((r)=>r.isDefault);console.log(JSON.stringify({orgId:i,drive:c??a[0]??null},null,2))}catch(e){console.error(`Error: ${e.message}`),process.exit(1)}}),t.command("invite").argument("<email>","User email to invite").requiredOption("--role <role>","Role: viewer, editor, or admin").description("Invite a user to the current org").addHelpText("after",`
-This invites the user to the organization that owns the current drive. The user will have access to all drives in the org based on their role.`).action(async(e,i)=>{try{let{db:o,orgId:a}=R();Pn(o,{orgId:a,email:e,role:i.role}),console.log(`Invited ${e} as ${i.role}`)}catch(o){console.error(`Error: ${o.message}`),process.exit(1)}}),t}function R(){let n=_n();if(!n.auth.apiKey)throw Error("Not logged in. Run: agent-fs auth register <email>");let t=Wn(),e=bn(t,n.auth.apiKey);if(!e)throw Error("Invalid API key in config.");let i=Bn(t,e.id);if(i.length===0)throw Error("No orgs found.");return{db:t,orgId:i[0].id,userId:e.id}}import{Command as rt}from"commander";import{Command as jn}from"commander";import{execSync as f}from"child_process";import{getConfig as b,setConfigValue as h,createDatabase as Cn,getUserByApiKey as un,listUserOrgs as B,ensureLocalUser as Vn,createUser as nt,getConfigPath as tt}from"@/core";import{existsSync as et}from"fs";function x(){return new jn("onboard").description("Set up agent-fs (storage, embeddings, database, first user)").option("--local","Use local MinIO Docker container for S3").option("--remote <url>","Connect to a remote agent-fs server").option("-y, --yes","Accept all defaults without prompts").option("--s3-endpoint <url>","S3 endpoint URL").option("--s3-bucket <name>","S3 bucket name").option("--s3-access-key <key>","S3 access key ID").option("--s3-secret-key <key>","S3 secret access key").option("--s3-region <region>","S3 region").option("--embeddings <provider>","Embedding provider: openai, gemini, local, none").option("--openai-key <key>","OpenAI API key for embeddings").option("--gemini-key <key>","Gemini API key for embeddings").option("--no-daemon","Skip starting the daemon").action(async(t)=>{if(t.remote)console.error(`Remote mode is not yet supported in the onboard wizard.
+`);let I=!0;for(let L of n){let D=L.ok?"\u2713":"\u2717";if(console.log(`  ${D} ${L.name}: ${L.message}`),!L.ok)I=!1}if(console.log(),I)console.log("All checks passed.");else console.log("Some checks failed. Fix the issues above and re-run."),process.exit(1)}),t}M();import{Command as JE}from"commander";function ze(t){let n=new JE("drive").description("Drive management");return n.command("list").description("List drives in current org").action(async()=>{try{let{db:o,orgId:i}=On(),e=it(o,i);console.log(JSON.stringify({drives:e},null,2))}catch(o){console.error(`Error: ${o.message}`),process.exit(1)}}),n.command("create").argument("<name>","Drive name").description("Create a new drive").action(async(o)=>{try{let{db:i,orgId:e}=On(),u=et(i,{orgId:e,name:o});console.log(JSON.stringify(u,null,2))}catch(i){console.error(`Error: ${i.message}`),process.exit(1)}}),n.command("current").description("Show current drive context").action(async()=>{try{let{db:o,orgId:i,userId:e}=On(),u=it(o,i),E=u.find((y)=>y.isDefault);console.log(JSON.stringify({orgId:i,drive:E??u[0]??null},null,2))}catch(o){console.error(`Error: ${o.message}`),process.exit(1)}}),n.command("invite").argument("<email>","User email to invite").requiredOption("--role <role>","Role: viewer, editor, or admin").description("Invite a user to the current org").addHelpText("after",`
+This invites the user to the organization that owns the current drive. The user will have access to all drives in the org based on their role.`).action(async(o,i)=>{try{let{db:e,orgId:u}=On();Rt(e,{orgId:u,email:o,role:i.role}),console.log(`Invited ${o} as ${i.role}`)}catch(e){console.error(`Error: ${e.message}`),process.exit(1)}}),n}function On(){let t=Z();if(!t.auth.apiKey)throw Error("Not logged in. Run: agent-fs auth register <email>");let n=a(),o=b(n,t.auth.apiKey);if(!o)throw Error("Invalid API key in config.");let i=C(n,o.id);if(i.length===0)throw Error("No orgs found.");return{db:n,orgId:i[0].id,userId:o.id}}import{Command as PE}from"commander";M();import{Command as YE}from"commander";import{execSync as _t}from"child_process";import{existsSync as GE}from"fs";function Ln(){return new YE("onboard").description("Set up agent-fs (storage, embeddings, database, first user)").option("--local","Use local MinIO Docker container for S3").option("--remote <url>","Connect to a remote agent-fs server").option("-y, --yes","Accept all defaults without prompts").option("--s3-endpoint <url>","S3 endpoint URL").option("--s3-bucket <name>","S3 bucket name").option("--s3-access-key <key>","S3 access key ID").option("--s3-secret-key <key>","S3 secret access key").option("--s3-region <region>","S3 region").option("--embeddings <provider>","Embedding provider: openai, gemini, local, none").option("--openai-key <key>","OpenAI API key for embeddings").option("--gemini-key <key>","Gemini API key for embeddings").option("--no-daemon","Skip starting the daemon").action(async(n)=>{if(n.remote)console.error(`Remote mode is not yet supported in the onboard wizard.
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-  agent-fs config set api.url "`+t.remote+`"
-  agent-fs config set api.key "<your-api-key>"`),process.exit(1);let e=tt();if(et(e)){if(b().auth.apiKey&&!t.yes)console.log("Existing configuration found at "+e),console.log(`Re-running onboard will update settings. Use -y to accept defaults.
+  agent-fs config set api.url "`+n.remote+`"
+  agent-fs config set api.key "<your-api-key>"`),process.exit(1);let o=c();if(GE(o)){if(Z().auth.apiKey&&!n.yes)console.log("Existing configuration found at "+o),console.log(`Re-running onboard will update settings. Use -y to accept defaults.
 `)}console.log(`Setting up agent-fs...
-`);let o=!(t.s3Endpoint||t.s3Bucket||t.s3AccessKey||t.s3SecretKey);if(t.s3Endpoint){if(h("s3.endpoint",t.s3Endpoint),t.s3Bucket)h("s3.bucket",t.s3Bucket);if(t.s3AccessKey)h("s3.accessKeyId",t.s3AccessKey);if(t.s3SecretKey)h("s3.secretAccessKey",t.s3SecretKey);if(t.s3Region)h("s3.region",t.s3Region);h("s3.provider","s3"),console.log("S3 configured from flags.")}else if(o)await at(!!t.yes);else await ot();let a=t.embeddings??(t.yes?"none":void 0);if(a)it(a,t);else if(!t.yes)console.log(`
+`);let e=!(n.s3Endpoint||n.s3Bucket||n.s3AccessKey||n.s3SecretKey);if(n.s3Endpoint){if(v("s3.endpoint",n.s3Endpoint),n.s3Bucket)v("s3.bucket",n.s3Bucket);if(n.s3AccessKey)v("s3.accessKeyId",n.s3AccessKey);if(n.s3SecretKey)v("s3.secretAccessKey",n.s3SecretKey);if(n.s3Region)v("s3.region",n.s3Region);v("s3.provider","s3"),console.log("S3 configured from flags.")}else if(e)await FE(!!n.yes);else await QE();let u=n.embeddings??(n.yes?"none":void 0);if(u)CE(u,n);else if(!n.yes)console.log(`
 Embedding provider not specified. Skipping (semantic search disabled).`),console.log("Configure later: agent-fs config set embedding.provider openai");console.log(`
-Initializing database...`);let c=Cn();if(console.log("Database ready."),o||t.yes){let{apiKey:r}=Vn(c),s=un(c,r),d=B(c,s.id);console.log(`
-User registered: ${s.email}`),console.log(`API Key: ${r}`),console.log(`Org ID: ${d[0]?.id}`)}else{let r=await ct();try{let s=nt(c,{email:r}),d=B(c,s.user.id);h("auth.apiKey",s.apiKey),console.log(`
-User registered: ${r}`),console.log(`API Key: ${s.apiKey}`),console.log(`Org ID: ${d[0]?.id}`)}catch(s){if(s.message?.includes("UNIQUE"))console.log(`User ${r} already exists.`);else throw s}}console.log("\nSetup complete! Run `agent-fs daemon start` to begin."),console.log("Or use MCP directly: agent-fs mcp")})}function it(n,t){switch(n){case"openai":if(h("embedding.provider","openai"),h("embedding.model","text-embedding-3-small"),t.openaiKey)h("embedding.apiKey",t.openaiKey);console.log("Embeddings: OpenAI (text-embedding-3-small)");break;case"gemini":if(h("embedding.provider","gemini"),h("embedding.model","text-embedding-004"),t.geminiKey)h("embedding.apiKey",t.geminiKey);console.log("Embeddings: Google Gemini (text-embedding-004)");break;case"local":h("embedding.provider","local"),console.log("Embeddings: local llama.cpp");break;case"none":h("embedding.provider","local"),h("embedding.model",""),h("embedding.apiKey",""),console.log("Embeddings: disabled (semantic search unavailable)");break;default:console.error(`Unknown embedding provider: ${n}`),console.error("Valid options: openai, gemini, local, none"),process.exit(1)}}async function at(n){try{f("which docker",{stdio:"ignore"}),f("docker info",{stdio:"ignore"})}catch{console.error(`Docker is required for local mode (MinIO).
+Initializing database...`);let E=a();if(console.log("Database ready."),e||n.yes){let{apiKey:y}=Qt(E),N=b(E,y),I=C(E,N.id);console.log(`
+User registered: ${N.email}`),console.log(`API Key: ${y}`),console.log(`Org ID: ${I[0]?.id}`)}else{let y=await fE();try{let N=p(E,{email:y}),I=C(E,N.user.id);v("auth.apiKey",N.apiKey),console.log(`
+User registered: ${y}`),console.log(`API Key: ${N.apiKey}`),console.log(`Org ID: ${I[0]?.id}`)}catch(N){if(N.message?.includes("UNIQUE"))console.log(`User ${y} already exists.`);else throw N}}console.log("\nSetup complete! Run `agent-fs daemon start` to begin."),console.log("Or use MCP directly: agent-fs mcp")})}function CE(t,n){switch(t){case"openai":if(v("embedding.provider","openai"),v("embedding.model","text-embedding-3-small"),n.openaiKey)v("embedding.apiKey",n.openaiKey);console.log("Embeddings: OpenAI (text-embedding-3-small)");break;case"gemini":if(v("embedding.provider","gemini"),v("embedding.model","text-embedding-004"),n.geminiKey)v("embedding.apiKey",n.geminiKey);console.log("Embeddings: Google Gemini (text-embedding-004)");break;case"local":v("embedding.provider","local"),console.log("Embeddings: local llama.cpp");break;case"none":v("embedding.provider","local"),v("embedding.model",""),v("embedding.apiKey",""),console.log("Embeddings: disabled (semantic search unavailable)");break;default:console.error(`Unknown embedding provider: ${t}`),console.error("Valid options: openai, gemini, local, none"),process.exit(1)}}async function FE(t){try{_t("which docker",{stdio:"ignore"}),_t("docker info",{stdio:"ignore"})}catch{console.error(`Docker is required for local mode (MinIO).
 Install Docker: https://docs.docker.com/get-docker/
-Or use 'agent-fs onboard --s3-endpoint <url>' to configure your own S3 bucket.`),process.exit(1)}let t=f("docker ps -a --filter name=agent-fs-minio --format '{{.Names}}'",{encoding:"utf-8"}).trim();if(t==="agent-fs-minio")console.log("Found existing MinIO container (agent-fs-minio).");if(!n){let e=t==="agent-fs-minio"?"start the existing":"create a new";process.stdout.write(`This will ${e} MinIO Docker container. Continue? [Y/n] `);let i=Bun.stdin.stream().getReader(),{value:o}=await i.read();i.releaseLock();let a=new TextDecoder().decode(o).trim().toLowerCase();if(a==="n"||a==="no"){console.log("Skipped MinIO setup. Configure S3 manually:"),console.log("  agent-fs config set s3.endpoint <url>");return}}console.log("Setting up MinIO (local S3)...");try{if(t==="agent-fs-minio")f("docker start agent-fs-minio",{stdio:"inherit"}),console.log("MinIO container started.");else f('docker run -d --name agent-fs-minio -p 9000:9000 -p 9001:9001 -v agent-fs-minio-data:/data -e MINIO_ROOT_USER=minioadmin -e MINIO_ROOT_PASSWORD=minioadmin minio/minio server /data --console-address ":9001"',{stdio:"inherit"}),console.log("MinIO container created.");console.log("Waiting for MinIO to be ready..."),await new Promise((i)=>setTimeout(i,2000));try{f("docker exec agent-fs-minio mc alias set local http://localhost:9000 minioadmin minioadmin && docker exec agent-fs-minio mc mb --ignore-existing local/agentfs",{stdio:"inherit"})}catch{}let e=f("docker inspect --format='{{.Id}}' agent-fs-minio",{encoding:"utf-8"}).trim();h("minio.containerId",e),h("minio.managed",!0)}catch(e){console.error(`Failed to set up MinIO: ${e.message}`),process.exit(1)}h("s3.provider","minio"),h("s3.endpoint","http://localhost:9000"),h("s3.bucket","agentfs"),h("s3.region","us-east-1"),h("s3.accessKeyId","minioadmin"),h("s3.secretAccessKey","minioadmin"),console.log("MinIO configured.")}async function ot(){let n=b();console.log("Using S3 configuration from ~/.agent-fs/config.json"),console.log(`  Provider: ${n.s3.provider}`),console.log(`  Endpoint: ${n.s3.endpoint}`),console.log(`  Bucket: ${n.s3.bucket}`),console.log(`
-Edit with: agent-fs config set s3.endpoint <url>`)}async function ct(){process.stdout.write("Email for first user: ");let n=Bun.stdin.stream().getReader(),{value:t}=await n.read();return n.releaseLock(),new TextDecoder().decode(t).trim()||"local@agent-fs.local"}function _(){let n=x(),t=new rt("init").description("Set up agent-fs (alias for 'onboard')").allowUnknownOption(!0).action(async(e,i)=>{console.log(`Note: 'agent-fs init' is now 'agent-fs onboard'.
-`),await n.parseAsync(i.args,{from:"user"})});for(let e of n.options)t.addOption(e);return t}import{Command as st}from"commander";function P(n,t){let e=new st("comment").description("Document comments");async function i(o,a){if(await q())return n.callOp(t(),o,a);else{let c=S();return $(c,o,a)}}return e.command("add").argument("<path>","File path to comment on").requiredOption("--body <text>","Comment body").option("--line <n>","Line number (sets both line-start and line-end)").option("--line-start <n>","Start line").option("--line-end <n>","End line").option("--quoted-content <text>","Quoted content from the file").description("Add a comment to a file").action(async(o,a)=>{try{let c={path:o,body:a.body};if(a.quotedContent)c.quotedContent=a.quotedContent;if(a.line)c.lineStart=parseInt(a.line),c.lineEnd=parseInt(a.line);if(a.lineStart)c.lineStart=parseInt(a.lineStart);if(a.lineEnd)c.lineEnd=parseInt(a.lineEnd);let r=await i("comment-add",c);console.log(JSON.stringify(r,null,2))}catch(c){console.error(`Error: ${c.message}`),process.exit(1)}}),e.command("reply").argument("<comment-id>","Parent comment ID to reply to").requiredOption("--body <text>","Reply body").description("Reply to a comment").action(async(o,a)=>{try{let c=await i("comment-add",{parentId:o,body:a.body});console.log(JSON.stringify(c,null,2))}catch(c){console.error(`Error: ${c.message}`),process.exit(1)}}),e.command("list").argument("[path]","File path to list comments for").option("--resolved","Show resolved comments").option("--limit <n>","Max results").option("--offset <n>","Skip N results").description("List comments").action(async(o,a)=>{try{let c={};if(o)c.path=o;if(a.resolved)c.resolved=!0;if(a.limit)c.limit=parseInt(a.limit);if(a.offset)c.offset=parseInt(a.offset);let r=await i("comment-list",c);console.log(JSON.stringify(r,null,2))}catch(c){console.error(`Error: ${c.message}`),process.exit(1)}}),e.command("get").argument("<id>","Comment ID").description("Get a comment with its replies").action(async(o)=>{try{let a=await i("comment-get",{id:o});console.log(JSON.stringify(a,null,2))}catch(a){console.error(`Error: ${a.message}`),process.exit(1)}}),e.command("update").argument("<id>","Comment ID").requiredOption("--body <text>","New comment body").description("Update a comment").action(async(o,a)=>{try{let c=await i("comment-update",{id:o,body:a.body});console.log(JSON.stringify(c,null,2))}catch(c){console.error(`Error: ${c.message}`),process.exit(1)}}),e.command("delete").argument("<id>","Comment ID").description("Delete a comment (soft delete)").action(async(o)=>{try{let a=await i("comment-delete",{id:o});console.log(JSON.stringify(a,null,2))}catch(a){console.error(`Error: ${a.message}`),process.exit(1)}}),e.command("resolve").argument("<id>","Comment ID").description("Resolve a comment").action(async(o)=>{try{let a=await i("comment-resolve",{id:o,resolved:!0});console.log(JSON.stringify(a,null,2))}catch(a){console.error(`Error: ${a.message}`),process.exit(1)}}),e.command("reopen").argument("<id>","Comment ID").description("Reopen a resolved comment").action(async(o)=>{try{let a=await i("comment-resolve",{id:o,resolved:!1});console.log(JSON.stringify(a,null,2))}catch(a){console.error(`Error: ${a.message}`),process.exit(1)}}),e}import{Command as ht}from"commander";var j=`---
+Or use 'agent-fs onboard --s3-endpoint <url>' to configure your own S3 bucket.`),process.exit(1)}let n=_t("docker ps -a --filter name=agent-fs-minio --format '{{.Names}}'",{encoding:"utf-8"}).trim();if(n==="agent-fs-minio")console.log("Found existing MinIO container (agent-fs-minio).");if(!t){let o=n==="agent-fs-minio"?"start the existing":"create a new";process.stdout.write(`This will ${o} MinIO Docker container. Continue? [Y/n] `);let i=Bun.stdin.stream().getReader(),{value:e}=await i.read();i.releaseLock();let u=new TextDecoder().decode(e).trim().toLowerCase();if(u==="n"||u==="no"){console.log("Skipped MinIO setup. Configure S3 manually:"),console.log("  agent-fs config set s3.endpoint <url>");return}}console.log("Setting up MinIO (local S3)...");try{if(n==="agent-fs-minio")_t("docker start agent-fs-minio",{stdio:"inherit"}),console.log("MinIO container started.");else _t('docker run -d --name agent-fs-minio -p 9000:9000 -p 9001:9001 -v agent-fs-minio-data:/data -e MINIO_ROOT_USER=minioadmin -e MINIO_ROOT_PASSWORD=minioadmin minio/minio server /data --console-address ":9001"',{stdio:"inherit"}),console.log("MinIO container created.");console.log("Waiting for MinIO to be ready..."),await new Promise((i)=>setTimeout(i,2000));try{_t("docker exec agent-fs-minio mc alias set local http://localhost:9000 minioadmin minioadmin && docker exec agent-fs-minio mc mb --ignore-existing local/agentfs",{stdio:"inherit"})}catch{}let o=_t("docker inspect --format='{{.Id}}' agent-fs-minio",{encoding:"utf-8"}).trim();v("minio.containerId",o),v("minio.managed",!0)}catch(o){console.error(`Failed to set up MinIO: ${o.message}`),process.exit(1)}v("s3.provider","minio"),v("s3.endpoint","http://localhost:9000"),v("s3.bucket","agentfs"),v("s3.region","us-east-1"),v("s3.accessKeyId","minioadmin"),v("s3.secretAccessKey","minioadmin"),console.log("MinIO configured.")}async function QE(){let t=Z();console.log("Using S3 configuration from ~/.agent-fs/config.json"),console.log(`  Provider: ${t.s3.provider}`),console.log(`  Endpoint: ${t.s3.endpoint}`),console.log(`  Bucket: ${t.s3.bucket}`),console.log(`
+Edit with: agent-fs config set s3.endpoint <url>`)}async function fE(){process.stdout.write("Email for first user: ");let t=Bun.stdin.stream().getReader(),{value:n}=await t.read();return t.releaseLock(),new TextDecoder().decode(n).trim()||"local@agent-fs.local"}function me(){let t=Ln(),n=new PE("init").description("Set up agent-fs (alias for 'onboard')").allowUnknownOption(!0).action(async(o,i)=>{console.log(`Note: 'agent-fs init' is now 'agent-fs onboard'.
+`),await t.parseAsync(i.args,{from:"user"})});for(let o of t.options)n.addOption(o);return n}import{Command as HE}from"commander";function ce(t,n){let o=new HE("comment").description("Document comments");async function i(e,u){try{return await t.callOp(await n(),e,u)}catch(E){if(E?.cause?.code==="ECONNREFUSED"||E?.message?.includes("fetch failed"))console.error(`Cannot connect to agent-fs daemon.
+Start with: agent-fs daemon start
+Or set AGENT_FS_API_URL to connect to a remote server.`),process.exit(1);throw E}}return o.command("add").argument("<path>","File path to comment on").requiredOption("--body <text>","Comment body").option("--line <n>","Line number (sets both line-start and line-end)").option("--line-start <n>","Start line").option("--line-end <n>","End line").option("--quoted-content <text>","Quoted content from the file").description("Add a comment to a file").action(async(e,u)=>{try{let E={path:e,body:u.body};if(u.quotedContent)E.quotedContent=u.quotedContent;if(u.line)E.lineStart=parseInt(u.line),E.lineEnd=parseInt(u.line);if(u.lineStart)E.lineStart=parseInt(u.lineStart);if(u.lineEnd)E.lineEnd=parseInt(u.lineEnd);let y=await i("comment-add",E);console.log(JSON.stringify(y,null,2))}catch(E){console.error(`Error: ${E.message}`),process.exit(1)}}),o.command("reply").argument("<comment-id>","Parent comment ID to reply to").requiredOption("--body <text>","Reply body").description("Reply to a comment").action(async(e,u)=>{try{let E=await i("comment-add",{parentId:e,body:u.body});console.log(JSON.stringify(E,null,2))}catch(E){console.error(`Error: ${E.message}`),process.exit(1)}}),o.command("list").argument("[path]","File path to list comments for").option("--resolved","Show resolved comments").option("--limit <n>","Max results").option("--offset <n>","Skip N results").description("List comments").action(async(e,u)=>{try{let E={};if(e)E.path=e;if(u.resolved)E.resolved=!0;if(u.limit)E.limit=parseInt(u.limit);if(u.offset)E.offset=parseInt(u.offset);let y=await i("comment-list",E);console.log(JSON.stringify(y,null,2))}catch(E){console.error(`Error: ${E.message}`),process.exit(1)}}),o.command("get").argument("<id>","Comment ID").description("Get a comment with its replies").action(async(e)=>{try{let u=await i("comment-get",{id:e});console.log(JSON.stringify(u,null,2))}catch(u){console.error(`Error: ${u.message}`),process.exit(1)}}),o.command("update").argument("<id>","Comment ID").requiredOption("--body <text>","New comment body").description("Update a comment").action(async(e,u)=>{try{let E=await i("comment-update",{id:e,body:u.body});console.log(JSON.stringify(E,null,2))}catch(E){console.error(`Error: ${E.message}`),process.exit(1)}}),o.command("delete").argument("<id>","Comment ID").description("Delete a comment (soft delete)").action(async(e)=>{try{let u=await i("comment-delete",{id:e});console.log(JSON.stringify(u,null,2))}catch(u){console.error(`Error: ${u.message}`),process.exit(1)}}),o.command("resolve").argument("<id>","Comment ID").description("Resolve a comment").action(async(e)=>{try{let u=await i("comment-resolve",{id:e,resolved:!0});console.log(JSON.stringify(u,null,2))}catch(u){console.error(`Error: ${u.message}`),process.exit(1)}}),o.command("reopen").argument("<id>","Comment ID").description("Reopen a resolved comment").action(async(e)=>{try{let u=await i("comment-resolve",{id:e,resolved:!1});console.log(JSON.stringify(u,null,2))}catch(u){console.error(`Error: ${u.message}`),process.exit(1)}}),o}import{Command as KE}from"commander";var xe=`---
 name: agent-fs
 description: >-
   Use when the user wants to store, retrieve, search, or manage files in agent-fs \u2014
@@ -272,9 +431,9 @@ agent-fs recent docs/ --since 24h --limit 20
 \`\`\`bash
 agent-fs config validate
 \`\`\`
-`;function C(){return new ht("docs").description("Show agent-fs documentation and command reference").action(()=>{let n=j.replace(/^---[\s\S]*?---\n*/,"");console.log(n)})}var g=new mt;g.name("agent-fs").description("Agent-first filesystem backed by S3").version(wt).option("--org <orgId>","Override org context").option("--drive <driveId>","Override drive context").option("--json","Output raw JSON");var D=new N;function u(){let n=g.opts().org;if(n)return n;let t=gt();if(t.auth.apiKey)try{let{createDatabase:e}=y("@/core"),i=e(),o=ft(i,t.auth.apiKey);if(o){let a=yt(i,o.id);if(a.length>0)return a[0].id}}catch{}console.error("Error: No org context. Use --org or run 'agent-fs auth register'"),process.exit(1)}g.addCommand(C());G(g,D,u);g.addCommand(H(D));g.addCommand(L());g.addCommand(Y());g.addCommand(z(D));g.addCommand(_());g.addCommand(x());g.addCommand(P(D,u));g.command("mcp").description("Start MCP server (stdio)").action(async()=>{await import("@/mcp/index.js")});g.command("server").description("Run server in foreground (dev mode)").action(async()=>{await import("@/server/index.js")});var vt=`
+`;function ae(){return new KE("docs").description("Show agent-fs documentation and command reference").action(()=>{let t=xe.replace(/^---[\s\S]*?---\n*/,"");console.log(t)})}var P=new IN;P.name("agent-fs").description("Agent-first filesystem backed by S3").version(H).option("--org <orgId>","Override org context").option("--drive <driveId>","Override drive context").option("--json","Output raw JSON");var Wt=new vo;async function Xu(){let t=P.opts().org;if(t)return t;try{let n=await Wt.getMe();if(n.defaultOrgId)return n.defaultOrgId}catch(n){if(n?.message?.includes("Cannot connect"))console.error(n.message),process.exit(1)}console.error("Error: No org context. Use --org or run 'agent-fs auth register'"),process.exit(1)}P.addCommand(ae());Ve(P,Wt,Xu);P.addCommand(ke(Wt));P.addCommand(pe());P.addCommand(he());P.addCommand(ze(Wt));P.addCommand(me());P.addCommand(Ln());P.addCommand(ce(Wt,Xu));P.command("mcp").description("Start MCP server (stdio)").action(async()=>{await tu().then(() => mE)});P.command("server").description("Run server in foreground (dev mode)").action(async()=>{await Su().then(() => yN)});var gN=`
 Global Options:
   --org <orgId>    Override org context
   --drive <driveId>  Override drive context
   --json           Output raw JSON
-`;for(let n of g.commands)n.addHelpText("after",vt);g.parse();
+`;for(let t of P.commands)t.addHelpText("after",gN);P.parse();