@deskwork/core 0.45.2 → 0.46.0

package/dist/doctor/legacy-config.js

@@ -0,0 +1,174 @@
+/**
+ * Migration-only tolerant reader for the legacy `config.sites` block
+ * (Phase 39b; finalized in 39c as the sole home for `SiteConfig`).
+ *
+ * Per the sites→lanes retirement spec §"Migration":
+ *
+ *   > `sites` reads are tolerated *only* inside this migration. After it
+ *   > runs, nothing reads `sites`.
+ *
+ * This module is that tolerated read surface. It parses the on-disk
+ * `.deskwork/config.json` directly and extracts just the fields the
+ * migration needs (`sites.<id>.{contentDir, calendarPath, host}`),
+ * WITHOUT going through `parseConfig`. `parseConfig` strips the legacy
+ * fields the migration consumes (it surfaces only the typed `SiteConfig`
+ * subset and, post-migration, tolerates an absent `sites` by normalizing
+ * it to `{}` — AUDIT-20260603-11), so the migration reads the raw JSON
+ * directly to see the legacy block verbatim. It must read both shapes:
+ *
+ *   - pre-migration  (`sites` present)  → returns the legacy sites map.
+ *   - post-migration (`sites` absent)   → returns an EMPTY map, the
+ *     "nothing to migrate" signal the rule's idempotency relies on.
+ *
+ * 39b keeps the field present in the live schema; this reader exists so
+ * the migration does not depend on the live schema's required-`sites`
+ * invariant. 39c moves `SiteConfig` here and removes the live-schema
+ * `sites` field; until then this is a focused, additive read helper.
+ *
+ * Sibling-relative imports per the doctor convention (`@/` does not
+ * resolve under tsx at runtime in this package's `src/`).
+ */
+import { readFileSync, writeFileSync } from 'node:fs';
+import { configPath } from "../config.js";
+/** Narrow an unknown to a string-keyed record (object, not null/array). */
+function isRecord(value) {
+    return value !== null && typeof value === 'object' && !Array.isArray(value);
+}
+/** Read a non-empty string property from a record (undefined otherwise). */
+function readString(obj, key) {
+    const v = obj[key];
+    return typeof v === 'string' && v.length > 0 ? v : undefined;
+}
+/**
+ * Read the legacy `sites` block from `<projectRoot>/.deskwork/config.json`
+ * tolerantly.
+ *
+ *   - Config file ABSENT (ENOENT — never installed, or a bare fixture) →
+ *     returns an empty map. A project with no config has no legacy sites
+ *     to migrate; the rule no-ops. This mirrors `bootstrap.ts`'s
+ *     "no-config → nothing to do" branch and keeps the migration rule
+ *     safe to run unconditionally across the doctor's per-site loop.
+ *   - Config PRESENT but unreadable (non-ENOENT I/O) / not valid JSON →
+ *     throws. A config that exists but is broken should surface loudly
+ *     where the operator can fix it (AUDIT-20260530-10 precedent;
+ *     silently treating it as "no sites" would mask a real config-side
+ *     problem — the project's "no fallbacks" rule).
+ *   - Config present but no `sites` block (the post-migration shape) →
+ *     returns an empty map. This is the idempotency signal: nothing to
+ *     migrate.
+ *   - `sites` present → returns each site's `{ contentDir, calendarPath,
+ *     host, redirectsPath }`. A site missing a non-empty `contentDir`
+ *     throws (the migration cannot derive `scaffoldDefaults` without it).
+ *
+ * @throws when a PRESENT config is unreadable / not JSON, or a declared
+ *   site lacks a non-empty `contentDir`.
+ */
+export function readLegacySites(projectRoot) {
+    const path = configPath(projectRoot);
+    let raw;
+    try {
+        raw = readFileSync(path, 'utf8');
+    }
+    catch (err) {
+        if (err instanceof Error && 'code' in err && err.code === 'ENOENT') {
+            // No config on disk — no legacy sites. Nothing to migrate.
+            return { sites: new Map() };
+        }
+        const reason = err instanceof Error ? err.message : String(err);
+        throw new Error(`sites-to-lanes migration: could not read ${path}: ${reason}. ` +
+            `The migration needs the config to read the legacy "sites" block.`);
+    }
+    let parsed;
+    try {
+        parsed = JSON.parse(raw);
+    }
+    catch (err) {
+        const reason = err instanceof Error ? err.message : String(err);
+        throw new Error(`sites-to-lanes migration: invalid JSON in ${path}: ${reason}.`);
+    }
+    if (!isRecord(parsed)) {
+        throw new Error(`sites-to-lanes migration: ${path} is not a JSON object.`);
+    }
+    const obj = parsed;
+    const sites = new Map();
+    const sitesValue = obj.sites;
+    if (!isRecord(sitesValue)) {
+        // No `sites` block (post-migration shape) — nothing to migrate.
+        return { sites };
+    }
+    for (const slug of Object.keys(sitesValue)) {
+        const siteObj = sitesValue[slug];
+        if (!isRecord(siteObj)) {
+            throw new Error(`sites-to-lanes migration: site "${slug}" in ${path} is not an object.`);
+        }
+        const contentDir = readString(siteObj, 'contentDir');
+        if (contentDir === undefined) {
+            throw new Error(`sites-to-lanes migration: site "${slug}" in ${path} is missing a ` +
+                `non-empty "contentDir"; the migration cannot derive scaffoldDefaults ` +
+                `without it. Repair the config and re-run.`);
+        }
+        const calendarPath = readString(siteObj, 'calendarPath');
+        const host = readString(siteObj, 'host');
+        // AUDIT-20260604-11: a present-but-invalid `redirectsPath` (non-string
+        // or empty) must NOT be silently treated as absent — `readString` would
+        // omit it, and the migration's later `dropSitesBlock` would then discard
+        // a malformed-but-present value with no signal. Reject it loudly, mirroring
+        // the live `parseSiteConfig` rule (config.ts), so the operator repairs it.
+        // (Single read — `readString` is pure; reuse the result for the guard and
+        // the assignment.)
+        const redirectsPath = readString(siteObj, 'redirectsPath');
+        if ('redirectsPath' in siteObj && redirectsPath === undefined) {
+            throw new Error(`sites-to-lanes migration: site "${slug}" in ${path} has an invalid ` +
+                `"redirectsPath" (must be a non-empty string when set). Repair the ` +
+                `config and re-run.`);
+        }
+        const site = {
+            contentDir,
+            ...(calendarPath !== undefined ? { calendarPath } : {}),
+            ...(host !== undefined ? { host } : {}),
+            ...(redirectsPath !== undefined ? { redirectsPath } : {}),
+        };
+        sites.set(slug, site);
+    }
+    return { sites };
+}
+/**
+ * Rewrite `<projectRoot>/.deskwork/config.json` with the `sites` and
+ * `defaultSite` keys removed (migration step 3 — "drop sites"). Every
+ * other top-level key is preserved verbatim. A no-op when neither key
+ * is present (idempotent).
+ *
+ * Returns `true` when the file was rewritten (a key was dropped),
+ * `false` when there was nothing to drop.
+ *
+ * Note: `parseConfig` tolerates the resulting `sites`-less config
+ * (AUDIT-20260603-11 — an absent/empty `sites` normalizes to `{}`), so a
+ * migrated project still loads through `readConfig` and every
+ * config-reading command keeps working between 39b and 39c. 39c removes
+ * the `sites` field from the schema entirely; until then the migration's
+ * own `sites` reads go through `readLegacySites` (this module), which
+ * does not depend on the live schema's shape.
+ */
+export function dropSitesBlock(projectRoot) {
+    const path = configPath(projectRoot);
+    const raw = readFileSync(path, 'utf8');
+    const parsed = JSON.parse(raw);
+    if (!isRecord(parsed)) {
+        throw new Error(`sites-to-lanes migration: ${path} is not a JSON object; cannot drop sites.`);
+    }
+    const obj = parsed;
+    const hadSites = Object.prototype.hasOwnProperty.call(obj, 'sites');
+    const hadDefault = Object.prototype.hasOwnProperty.call(obj, 'defaultSite');
+    if (!hadSites && !hadDefault) {
+        return false;
+    }
+    const next = {};
+    for (const key of Object.keys(obj)) {
+        if (key === 'sites' || key === 'defaultSite')
+            continue;
+        next[key] = obj[key];
+    }
+    writeFileSync(path, JSON.stringify(next, null, 2) + '\n', 'utf8');
+    return true;
+}
+//# sourceMappingURL=legacy-config.js.map

package/dist/doctor/legacy-config.js.map

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package/dist/doctor/project-scope-gate.d.ts

@@ -1,31 +1,22 @@
 /**
  * Project-scope gate for doctor rules.
  *
- * The doctor runner invokes `audit()` once per configured site. Rules
- * whose target lives at the PROJECT scope (under `<projectRoot>/.deskwork/`
- * regardless of site count — lane configs, sidecars, the journal) need
- * to emit findings once, not N times. The convention this module
- * captures: project-scoped rules early-return when the current site is
- * not the FIRST site in `ctx.config.sites` (Object.keys insertion order).
- * Single-site projects (the overwhelming majority) trip the guard on
- * their only site; multi-site projects trip it on the first site listed
- * in the config and skip the remainder.
- *
- * The alternative — a dedicated project-scope abstraction in the runner
- * — would let project-scoped rules opt out of the per-site loop
- * entirely. Until that abstraction lands, this helper is the agreed
- * shape; extracted here so multiple rules consuming the pattern share a
- * single named definition rather than duplicating the body.
+ * Phase 39c (sites→lanes retirement): the doctor runner no longer loops
+ * per configured site — it runs a SINGLE project-scoped pass (see
+ * `runner.ts` `PROJECT_SCOPE`). Project-scoped rules (lane configs,
+ * sidecars, the journal) therefore already run exactly once. This gate
+ * is now a constant `true`; it is retained (rather than ripped out of
+ * every rule body) so the rules that consume it keep their shape and
+ * the single-pass guarantee is documented in one place.
  *
  * Sibling-relative imports per the project convention.
  */
 import type { DoctorContext } from './types.ts';
 /**
- * Returns `true` when the current site is the "first" site per the
- * config's `Object.keys` insertion order — the conventional signal
- * that a project-scoped rule should run during the current per-site
- * iteration. Empty `sites` collection returns `true` (degenerate
- * single-pass case so the rule still runs).
+ * Phase 39c: the runner makes a single project pass, so a project-scoped
+ * rule always runs exactly once. The legacy "first site in
+ * `Object.keys(config.sites)`" check is retired with the per-site loop;
+ * this now unconditionally admits the single pass.
  */
-export declare function isFirstSite(ctx: DoctorContext): boolean;
+export declare function isFirstSite(_ctx: DoctorContext): boolean;
 //# sourceMappingURL=project-scope-gate.d.ts.map

package/dist/doctor/project-scope-gate.d.ts.map

@@ -1 +1 @@
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package/dist/doctor/project-scope-gate.js

@@ -1,35 +1,23 @@
 /**
  * Project-scope gate for doctor rules.
  *
- * The doctor runner invokes `audit()` once per configured site. Rules
- * whose target lives at the PROJECT scope (under `<projectRoot>/.deskwork/`
- * regardless of site count — lane configs, sidecars, the journal) need
- * to emit findings once, not N times. The convention this module
- * captures: project-scoped rules early-return when the current site is
- * not the FIRST site in `ctx.config.sites` (Object.keys insertion order).
- * Single-site projects (the overwhelming majority) trip the guard on
- * their only site; multi-site projects trip it on the first site listed
- * in the config and skip the remainder.
- *
- * The alternative — a dedicated project-scope abstraction in the runner
- * — would let project-scoped rules opt out of the per-site loop
- * entirely. Until that abstraction lands, this helper is the agreed
- * shape; extracted here so multiple rules consuming the pattern share a
- * single named definition rather than duplicating the body.
+ * Phase 39c (sites→lanes retirement): the doctor runner no longer loops
+ * per configured site — it runs a SINGLE project-scoped pass (see
+ * `runner.ts` `PROJECT_SCOPE`). Project-scoped rules (lane configs,
+ * sidecars, the journal) therefore already run exactly once. This gate
+ * is now a constant `true`; it is retained (rather than ripped out of
+ * every rule body) so the rules that consume it keep their shape and
+ * the single-pass guarantee is documented in one place.
  *
  * Sibling-relative imports per the project convention.
  */
 /**
- * Returns `true` when the current site is the "first" site per the
- * config's `Object.keys` insertion order — the conventional signal
- * that a project-scoped rule should run during the current per-site
- * iteration. Empty `sites` collection returns `true` (degenerate
- * single-pass case so the rule still runs).
+ * Phase 39c: the runner makes a single project pass, so a project-scoped
+ * rule always runs exactly once. The legacy "first site in
+ * `Object.keys(config.sites)`" check is retired with the per-site loop;
+ * this now unconditionally admits the single pass.
  */
-export function isFirstSite(ctx) {
-    const siteIds = Object.keys(ctx.config.sites);
-    if (siteIds.length === 0)
-        return true;
-    return siteIds[0] === ctx.site;
+export function isFirstSite(_ctx) {
+    return true;
 }
 //# sourceMappingURL=project-scope-gate.js.map

package/dist/doctor/project-scope-gate.js.map

@@ -1 +1 @@
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package/dist/doctor/repair.d.ts

@@ -5,5 +5,16 @@ export interface RepairResult {
     applied: string[];
     pendingDestructive: string[];
 }
+/**
+ * Regenerate `calendar.md` from sidecars (the SSOT).
+ *
+ * Phase 39d (sites→lanes retirement): the runtime `artifactPath`
+ * backfiller that used to live here is REMOVED. Backfilling missing
+ * `artifactPath` is owned exclusively by the 39b migration
+ * (`sites-migration-backfill.ts`), which enumerates candidates across
+ * legacy content dirs and halts on ambiguity. `repair.ts` no longer
+ * derives a path from the slug+stage heuristic — it reads stored paths
+ * only and regenerates the calendar projection.
+ */
 export declare function repairAll(projectRoot: string, opts: RepairOptions): Promise<RepairResult>;
 //# sourceMappingURL=repair.d.ts.map

package/dist/doctor/repair.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"repair.d.ts","sourceRoot":"","sources":["../../src/doctor/repair.ts"],"names":[],"mappings":"AAQA,MAAM,WAAW,aAAa;IAC5B,WAAW,EAAE,OAAO,CAAC;CACtB;AAED,MAAM,WAAW,YAAY;IAC3B,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,kBAAkB,EAAE,MAAM,EAAE,CAAC;CAC9B;AAED;;;;;;;;;;GAUG;AACH,wBAAsB,SAAS,CAAC,WAAW,EAAE,MAAM,EAAE,IAAI,EAAE,aAAa,GAAG,OAAO,CAAC,YAAY,CAAC,CA8B/F"}

package/dist/doctor/repair.js

@@ -1,76 +1,21 @@
-import { readdir, readFile, writeFile, mkdir, stat } from 'node:fs/promises';
-import { join, dirname, relative } from 'node:path';
+import { readdir, readFile, writeFile, mkdir } from 'node:fs/promises';
+import { join, dirname } from 'node:path';
 import { sidecarsDir } from "../sidecar/paths.js";
 import { EntrySchema } from "../schema/entry.js";
 import { readConfig } from "../config.js";
 import { resolveCalendarPath } from "../paths.js";
 import { renderCalendar } from "../calendar/render.js";
 /**
- * Stage-conventional artifact path. Mirrors `artifactPathForStage` in
- * validate.ts (kept here to avoid a cross-import; both files reach for
- * the same canonical mapping). Returns null for stages with no on-disk
- * artifact, including stages outside the editorial pipeline (Phase 3
- * / Phase 4 — lane-aware path conventions land in lane code).
- */
-function artifactPathForStage(projectRoot, slug, stage) {
-    switch (stage) {
-        case 'Ideas':
-            return join(projectRoot, 'docs', slug, 'scrapbook', 'idea.md');
-        case 'Planned':
-            return join(projectRoot, 'docs', slug, 'scrapbook', 'plan.md');
-        case 'Outlining':
-            return join(projectRoot, 'docs', slug, 'scrapbook', 'outline.md');
-        case 'Drafting':
-        case 'Final':
-        case 'Published':
-            return join(projectRoot, 'docs', slug, 'index.md');
-        case 'Blocked':
-        case 'Cancelled':
-            return null;
-        default:
-            // Lane-specific or unrecognized stage; no editorial-default path
-            // applies. Phase 4 introduces template-driven path resolution.
-            return null;
-    }
-}
-async function fileExists(path) {
-    try {
-        await stat(path);
-        return true;
-    }
-    catch {
-        return false;
-    }
-}
-/**
- * #182 Phase 34 ship-pass — backfill `artifactPath` on sidecars that
- * lack the field but where the slug+stage heuristic resolves to a real
- * file. The validator's `missing-artifact-path` rule surfaces the gap;
- * this writer fixes it.
+ * Regenerate `calendar.md` from sidecars (the SSOT).
  *
- * Mutates each affected sidecar and returns a list of changed entry
- * UUIDs. Idempotent: re-running on already-fixed entries is a no-op.
+ * Phase 39d (sites→lanes retirement): the runtime `artifactPath`
+ * backfiller that used to live here is REMOVED. Backfilling missing
+ * `artifactPath` is owned exclusively by the 39b migration
+ * (`sites-migration-backfill.ts`), which enumerates candidates across
+ * legacy content dirs and halts on ambiguity. `repair.ts` no longer
+ * derives a path from the slug+stage heuristic — it reads stored paths
+ * only and regenerates the calendar projection.
  */
-async function backfillArtifactPaths(projectRoot, entries, sidecarPaths) {
-    const changed = [];
-    for (const entry of entries) {
-        if (entry.artifactPath !== undefined && entry.artifactPath !== '')
-            continue;
-        const heuristicAbs = artifactPathForStage(projectRoot, entry.slug, entry.currentStage);
-        if (!heuristicAbs)
-            continue;
-        if (!(await fileExists(heuristicAbs)))
-            continue;
-        const sidecarPath = sidecarPaths.get(entry.uuid);
-        if (!sidecarPath)
-            continue;
-        const relPath = relative(projectRoot, heuristicAbs);
-        const updated = { ...entry, artifactPath: relPath };
-        await writeFile(sidecarPath, JSON.stringify(updated, null, 2));
-        changed.push(entry.uuid);
-    }
-    return changed;
-}
 export async function repairAll(projectRoot, opts) {
     void opts;
     const result = { applied: [], pendingDestructive: [] };
@@ -84,7 +29,6 @@ export async function repairAll(projectRoot, opts) {
         return result;
     }
     const entries = [];
-    const sidecarPaths = new Map();
     for (const name of names.filter(n => n.endsWith('.json'))) {
         const sidecarPath = join(dir, name);
         const raw = await readFile(sidecarPath, 'utf8');
@@ -92,33 +36,10 @@ export async function repairAll(projectRoot, opts) {
             const parsed = EntrySchema.safeParse(JSON.parse(raw));
             if (parsed.success) {
                 entries.push(parsed.data);
-                sidecarPaths.set(parsed.data.uuid, sidecarPath);
             }
         }
         catch { /* skip malformed */ }
     }
-    // #182 — backfill missing artifactPath BEFORE regenerating calendar
-    // so the calendar render uses the freshly-stamped paths if it
-    // consumes them downstream.
-    const backfilled = await backfillArtifactPaths(projectRoot, entries, sidecarPaths);
-    if (backfilled.length > 0) {
-        // Re-load the entries so the calendar render sees the stamped
-        // paths (the in-memory `entries` array is now stale for those
-        // UUIDs).
-        for (let i = 0; i < entries.length; i++) {
-            const e = entries[i];
-            if (!e || !backfilled.includes(e.uuid))
-                continue;
-            const sidecarPath = sidecarPaths.get(e.uuid);
-            if (!sidecarPath)
-                continue;
-            const raw = await readFile(sidecarPath, 'utf8');
-            const parsed = EntrySchema.safeParse(JSON.parse(raw));
-            if (parsed.success)
-                entries[i] = parsed.data;
-        }
-        result.applied.push(`artifact-path-backfilled (${backfilled.length} entrie(s))`);
-    }
     const md = renderCalendar(entries);
     // #232: honor the configured per-site calendarPath (default site) rather
     // than the hardcoded `.deskwork/calendar.md`, consistent with regenerateCalendar.

package/dist/doctor/repair.js.map

@@ -1 +1 @@
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+{"version":3,"file":"repair.js","sourceRoot":"","sources":["../../src/doctor/repair.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,QAAQ,EAAE,SAAS,EAAE,KAAK,EAAE,MAAM,kBAAkB,CAAC;AACvE,OAAO,EAAE,IAAI,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAC1C,OAAO,EAAE,WAAW,EAAE,MAAM,qBAAqB,CAAC;AAClD,OAAO,EAAE,WAAW,EAAc,MAAM,oBAAoB,CAAC;AAC7D,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAC1C,OAAO,EAAE,mBAAmB,EAAE,MAAM,aAAa,CAAC;AAClD,OAAO,EAAE,cAAc,EAAE,MAAM,uBAAuB,CAAC;AAWvD;;;;;;;;;;GAUG;AACH,MAAM,CAAC,KAAK,UAAU,SAAS,CAAC,WAAmB,EAAE,IAAmB;IACtE,KAAK,IAAI,CAAC;IACV,MAAM,MAAM,GAAiB,EAAE,OAAO,EAAE,EAAE,EAAE,kBAAkB,EAAE,EAAE,EAAE,CAAC;IAErE,uCAAuC;IACvC,MAAM,GAAG,GAAG,WAAW,CAAC,WAAW,CAAC,CAAC;IACrC,IAAI,KAAK,GAAa,EAAE,CAAC;IACzB,IAAI,CAAC;QAAC,KAAK,GAAG,MAAM,OAAO,CAAC,GAAG,CAAC,CAAC;IAAC,CAAC;IAAC,MAAM,CAAC;QAAC,OAAO,MAAM,CAAC;IAAC,CAAC;IAE5D,MAAM,OAAO,GAAY,EAAE,CAAC;IAC5B,KAAK,MAAM,IAAI,IAAI,KAAK,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,QAAQ,CAAC,OAAO,CAAC,CAAC,EAAE,CAAC;QAC1D,MAAM,WAAW,GAAG,IAAI,CAAC,GAAG,EAAE,IAAI,CAAC,CAAC;QACpC,MAAM,GAAG,GAAG,MAAM,QAAQ,CAAC,WAAW,EAAE,MAAM,CAAC,CAAC;QAChD,IAAI,CAAC;YACH,MAAM,MAAM,GAAG,WAAW,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC;YACtD,IAAI,MAAM,CAAC,OAAO,EAAE,CAAC;gBACnB,OAAO,CAAC,IAAI,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;YAC5B,CAAC;QACH,CAAC;QAAC,MAAM,CAAC,CAAC,oBAAoB,CAAC,CAAC;IAClC,CAAC;IAED,MAAM,EAAE,GAAG,cAAc,CAAC,OAAO,CAAC,CAAC;IACnC,yEAAyE;IACzE,kFAAkF;IAClF,MAAM,YAAY,GAAG,mBAAmB,CAAC,WAAW,EAAE,UAAU,CAAC,WAAW,CAAC,CAAC,CAAC;IAC/E,MAAM,KAAK,CAAC,OAAO,CAAC,YAAY,CAAC,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC;IACxD,MAAM,SAAS,CAAC,YAAY,EAAE,EAAE,CAAC,CAAC;IAClC,MAAM,CAAC,OAAO,CAAC,IAAI,CAAC,sBAAsB,CAAC,CAAC;IAE5C,OAAO,MAAM,CAAC;AAChB,CAAC"}

package/dist/doctor/rules/duplicate-id.d.ts

@@ -18,8 +18,13 @@ interface DuplicateGroup {
 }
 /**
  * Group `index.byPath` (relPath → uuid) by uuid, return only groups
- * with more than one file. Caller resolves relative paths against
- * the site's contentDir to get absolute paths for repair.
+ * with more than one file.
+ *
+ * Phase 39c (sites→lanes retirement): the doctor's content index is now
+ * built by `buildContentIndexFromSidecars`, whose `byPath` keys are
+ * PROJECT-ROOT-relative (matching `entry.artifactPath`'s base), not
+ * contentDir-relative. So we reconstruct absolute paths by joining
+ * against `projectRoot` — there is no per-site `contentDir` axis.
  */
 export declare function findDuplicateGroups(ctx: DoctorContext): DuplicateGroup[];
 declare const rule: DoctorRule;

package/dist/doctor/rules/duplicate-id.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"duplicate-id.d.ts","sourceRoot":"","sources":["../../../src/doctor/rules/duplicate-id.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAMH,OAAO,KAAK,EACV,aAAa,EACb,UAAU,EAIX,MAAM,aAAa,CAAC;AAyBrB,UAAU,cAAc;IACtB,EAAE,EAAE,MAAM,CAAC;IACX,kDAAkD;IAClD,KAAK,EAAE,MAAM,EAAE,CAAC;CACjB;AAED;;;;GAIG;AACH,wBAAgB,mBAAmB,CACjC,GAAG,EAAE,aAAa,GACjB,cAAc,EAAE,CAgBlB;AAED,QAAA,MAAM,IAAI,EAAE,UA2FX,CAAC;AAEF,eAAe,IAAI,CAAC"}
+{"version":3,"file":"duplicate-id.d.ts","sourceRoot":"","sources":["../../../src/doctor/rules/duplicate-id.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAKH,OAAO,KAAK,EACV,aAAa,EACb,UAAU,EAIX,MAAM,aAAa,CAAC;AAyBrB,UAAU,cAAc;IACtB,EAAE,EAAE,MAAM,CAAC;IACX,kDAAkD;IAClD,KAAK,EAAE,MAAM,EAAE,CAAC;CACjB;AAED;;;;;;;;;GASG;AACH,wBAAgB,mBAAmB,CACjC,GAAG,EAAE,aAAa,GACjB,cAAc,EAAE,CAelB;AAED,QAAA,MAAM,IAAI,EAAE,UA2FX,CAAC;AAEF,eAAe,IAAI,CAAC"}

package/dist/doctor/rules/duplicate-id.js

@@ -13,7 +13,6 @@
 import { readFileSync, writeFileSync } from 'node:fs';
 import { join, relative } from 'node:path';
 import { parseFrontmatter, removeFrontmatterPaths } from "../../frontmatter.js";
-import { resolveContentDir } from "../../paths.js";
 const RULE_ID = 'duplicate-id';
 /**
  * Clear the `deskwork.id` field from a markdown file. Returns true when
@@ -40,14 +39,18 @@ function clearFrontmatterId(absPath) {
 }
 /**
  * Group `index.byPath` (relPath → uuid) by uuid, return only groups
- * with more than one file. Caller resolves relative paths against
- * the site's contentDir to get absolute paths for repair.
+ * with more than one file.
+ *
+ * Phase 39c (sites→lanes retirement): the doctor's content index is now
+ * built by `buildContentIndexFromSidecars`, whose `byPath` keys are
+ * PROJECT-ROOT-relative (matching `entry.artifactPath`'s base), not
+ * contentDir-relative. So we reconstruct absolute paths by joining
+ * against `projectRoot` — there is no per-site `contentDir` axis.
  */
 export function findDuplicateGroups(ctx) {
-    const contentDir = resolveContentDir(ctx.projectRoot, ctx.config, ctx.site);
     const byUuid = new Map();
     for (const [relPath, uuid] of ctx.index.byPath) {
-        const abs = join(contentDir, relPath);
+        const abs = join(ctx.projectRoot, relPath);
         const list = byUuid.get(uuid);
         if (list)
             list.push(abs);

package/dist/doctor/rules/duplicate-id.js.map

@@ -1 +1 @@
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+{"version":3,"file":"duplicate-id.js","sourceRoot":"","sources":["../../../src/doctor/rules/duplicate-id.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAEH,OAAO,EAAE,YAAY,EAAE,aAAa,EAAE,MAAM,SAAS,CAAC;AACtD,OAAO,EAAE,IAAI,EAAE,QAAQ,EAAE,MAAM,WAAW,CAAC;AAC3C,OAAO,EAAE,gBAAgB,EAAE,sBAAsB,EAAE,MAAM,sBAAsB,CAAC;AAShF,MAAM,OAAO,GAAG,cAAc,CAAC;AAE/B;;;;;GAKG;AACH,SAAS,kBAAkB,CAAC,OAAe;IACzC,MAAM,GAAG,GAAG,YAAY,CAAC,OAAO,EAAE,OAAO,CAAC,CAAC;IAC3C,MAAM,EAAE,IAAI,EAAE,GAAG,gBAAgB,CAAC,GAAG,CAAC,CAAC;IACvC,MAAM,KAAK,GAAG,IAAI,CAAC,QAAQ,CAAC;IAC5B,IAAI,KAAK,KAAK,SAAS,IAAI,KAAK,KAAK,IAAI;QAAE,OAAO,KAAK,CAAC;IACxD,IAAI,OAAO,KAAK,KAAK,QAAQ,IAAI,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC;QAAE,OAAO,KAAK,CAAC;IACpE,MAAM,QAAQ,GAAG,KAAgC,CAAC;IAClD,IAAI,CAAC,CAAC,IAAI,IAAI,QAAQ,CAAC;QAAE,OAAO,KAAK,CAAC;IAEtC,MAAM,OAAO,GAAG,sBAAsB,CAAC,GAAG,EAAE,CAAC,CAAC,UAAU,EAAE,IAAI,CAAC,CAAC,CAAC,CAAC;IAClE,IAAI,OAAO,KAAK,GAAG;QAAE,OAAO,KAAK,CAAC;IAClC,aAAa,CAAC,OAAO,EAAE,OAAO,EAAE,OAAO,CAAC,CAAC;IACzC,OAAO,IAAI,CAAC;AACd,CAAC;AAQD;;;;;;;;;GASG;AACH,MAAM,UAAU,mBAAmB,CACjC,GAAkB;IAElB,MAAM,MAAM,GAAG,IAAI,GAAG,EAAoB,CAAC;IAC3C,KAAK,MAAM,CAAC,OAAO,EAAE,IAAI,CAAC,IAAI,GAAG,CAAC,KAAK,CAAC,MAAM,EAAE,CAAC;QAC/C,MAAM,GAAG,GAAG,IAAI,CAAC,GAAG,CAAC,WAAW,EAAE,OAAO,CAAC,CAAC;QAC3C,MAAM,IAAI,GAAG,MAAM,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC;QAC9B,IAAI,IAAI;YAAE,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;;YACpB,MAAM,CAAC,GAAG,CAAC,IAAI,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC;IAC/B,CAAC;IACD,MAAM,MAAM,GAAqB,EAAE,CAAC;IACpC,KAAK,MAAM,CAAC,IAAI,EAAE,KAAK,CAAC,IAAI,MAAM,EAAE,CAAC;QACnC,IAAI,KAAK,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;YACrB,MAAM,CAAC,IAAI,CAAC,EAAE,EAAE,EAAE,IAAI,EAAE,KAAK,EAAE,KAAK,CAAC,KAAK,EAAE,CAAC,IAAI,EAAE,EAAE,CAAC,CAAC;QACzD,CAAC;IACH,CAAC;IACD,OAAO,MAAM,CAAC;AAChB,CAAC;AAED,MAAM,IAAI,GAAe;IACvB,EAAE,EAAE,OAAO;IACX,KAAK,EAAE,8CAA8C;IAErD,KAAK,CAAC,KAAK,CAAC,GAAkB;QAC5B,MAAM,MAAM,GAAG,mBAAmB,CAAC,GAAG,CAAC,CAAC;QACxC,OAAO,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;YACxB,MAAM,EAAE,OAAO;YACf,IAAI,EAAE,GAAG,CAAC,IAAI;YACd,QAAQ,EAAE,OAAO;YACjB,OAAO,EAAE,MAAM,CAAC,CAAC,EAAE,eAAe,CAAC,CAAC,KAAK,CAAC,MAAM,QAAQ;YACxD,OAAO,EAAE,EAAE,OAAO,EAAE,CAAC,CAAC,EAAE,EAAE,KAAK,EAAE,CAAC,CAAC,KAAK,EAAE;SAC3C,CAAC,CAAC,CAAC;IACN,CAAC;IAED,KAAK,CAAC,IAAI,CAAC,GAAkB,EAAE,OAAgB;QAC7C,MAAM,QAAQ,GAAG,OAAO,CAAC,OAAO,CAAC,KAAK,CAAC;QACvC,MAAM,KAAK,GAAa,KAAK,CAAC,OAAO,CAAC,QAAQ,CAAC;YAC7C,CAAC,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC,CAAC,EAAe,EAAE,CAAC,OAAO,CAAC,KAAK,QAAQ,CAAC;YAC5D,CAAC,CAAC,EAAE,CAAC;QACP,IAAI,KAAK,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;YACrB,OAAO;gBACL,IAAI,EAAE,aAAa;gBACnB,OAAO;gBACP,MAAM,EAAE,uDAAuD;aAChE,CAAC;QACJ,CAAC;QACD,OAAO;YACL,IAAI,EAAE,QAAQ;YACd,OAAO;YACP,QAAQ,EAAE,2BAA2B,OAAO,CAAC,OAAO,CAAC,OAAO,oEAAoE;YAChI,OAAO,EAAE,KAAK,CAAC,GAAG,CAAC,CAAC,GAAG,EAAE,EAAE,CAAC,CAAC;gBAC3B,EAAE,EAAE,GAAG;gBACP,KAAK,EAAE,QAAQ,CAAC,GAAG,CAAC,WAAW,EAAE,GAAG,CAAC;gBACrC,OAAO,EAAE,EAAE,SAAS,EAAE,GAAG,EAAE,MAAM,EAAE,KAAK,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,KAAK,GAAG,CAAC,EAAE;aACpE,CAAC,CAAC;SACJ,CAAC;IACJ,CAAC;IAED,KAAK,CAAC,KAAK,CAAC,GAAkB,EAAE,IAAgB;QAC9C,IAAI,IAAI,CAAC,IAAI,KAAK,OAAO,EAAE,CAAC;YAC1B,OAAO;gBACL,OAAO,EAAE,IAAI,CAAC,OAAO;gBACrB,OAAO,EAAE,KAAK;gBACd,OAAO,EAAE,oEAAoE;gBAC7E,UAAU,EAAE,cAAc;aAC3B,CAAC;QACJ,CAAC;QACD,MAAM,SAAS,GAAG,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,SAAS,IAAI,EAAE,CAAC,CAAC;QACvD,MAAM,SAAS,GAAG,IAAI,CAAC,OAAO,CAAC,MAAM,CAAC;QACtC,MAAM,MAAM,GAAG,KAAK,CAAC,OAAO,CAAC,SAAS,CAAC;YACrC,CAAC,CAAC,CAAC,SAAS,CAAC,MAAM,CAAC,CAAC,CAAC,EAAe,EAAE,CAAC,OAAO,CAAC,KAAK,QAAQ,CAAC,CAAC;YAC/D,CAAC,CAAC,EAAE,CAAC;QACP,IAAI,CAAC,SAAS,IAAI,MAAM,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YACtC,OAAO;gBACL,OAAO,EAAE,IAAI,CAAC,OAAO;gBACrB,OAAO,EAAE,KAAK;gBACd,OAAO,EAAE,2CAA2C;gBACpD,UAAU,EAAE,cAAc;aAC3B,CAAC;QACJ,CAAC;QACD,MAAM,OAAO,GAAa,EAAE,CAAC;QAC7B,MAAM,MAAM,GAAa,EAAE,CAAC;QAC5B,KAAK,MAAM,GAAG,IAAI,MAAM,EAAE,CAAC;YACzB,IAAI,CAAC;gBACH,MAAM,OAAO,GAAG,kBAAkB,CAAC,GAAG,CAAC,CAAC;gBACxC,IAAI,OAAO;oBAAE,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;YACjC,CAAC;YAAC,MAAM,CAAC;gBACP,MAAM,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;YACnB,CAAC;QACH,CAAC;QACD,IAAI,MAAM,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;YACtB,MAAM,OAAO,GAAG,OAAO,CAAC,MAAM,GAAG,CAAC,CAAC;YACnC,OAAO;gBACL,OAAO,EAAE,IAAI,CAAC,OAAO;gBACrB,OAAO,EAAE,OAAO;gBAChB,OAAO,EAAE,mBAAmB,OAAO,CAAC,MAAM,uBAAuB,MAAM,CAAC,MAAM,KAAK,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,QAAQ,CAAC,GAAG,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE;gBAC/I,8DAA8D;gBAC9D,8DAA8D;gBAC9D,+BAA+B;gBAC/B,GAAG,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,EAAE,UAAU,EAAE,cAAuB,EAAE,CAAC;gBAC3D,OAAO,EAAE,EAAE,SAAS,EAAE,OAAO,EAAE,MAAM,EAAE;aACxC,CAAC;QACJ,CAAC;QACD,OAAO;YACL,OAAO,EAAE,IAAI,CAAC,OAAO;YACrB,OAAO,EAAE,IAAI;YACb,OAAO,EAAE,mBAAmB,OAAO,CAAC,MAAM,wBAAwB,QAAQ,CAAC,GAAG,CAAC,WAAW,EAAE,SAAS,CAAC,EAAE;YACxG,OAAO,EAAE,EAAE,SAAS,EAAE,OAAO,EAAE;SAChC,CAAC;IACJ,CAAC;CACF,CAAC;AAEF,eAAe,IAAI,CAAC"}

package/dist/doctor/rules/duplicate-id.ts

@@ -14,7 +14,6 @@
 import { readFileSync, writeFileSync } from 'node:fs';
 import { join, relative } from 'node:path';
 import { parseFrontmatter, removeFrontmatterPaths } from '../../frontmatter.ts';
-import { resolveContentDir } from '../../paths.ts';
 import type {
   DoctorContext,
   DoctorRule,
@@ -54,16 +53,20 @@ interface DuplicateGroup {
 
 /**
  * Group `index.byPath` (relPath → uuid) by uuid, return only groups
- * with more than one file. Caller resolves relative paths against
- * the site's contentDir to get absolute paths for repair.
+ * with more than one file.
+ *
+ * Phase 39c (sites→lanes retirement): the doctor's content index is now
+ * built by `buildContentIndexFromSidecars`, whose `byPath` keys are
+ * PROJECT-ROOT-relative (matching `entry.artifactPath`'s base), not
+ * contentDir-relative. So we reconstruct absolute paths by joining
+ * against `projectRoot` — there is no per-site `contentDir` axis.
  */
 export function findDuplicateGroups(
   ctx: DoctorContext,
 ): DuplicateGroup[] {
-  const contentDir = resolveContentDir(ctx.projectRoot, ctx.config, ctx.site);
   const byUuid = new Map<string, string[]>();
   for (const [relPath, uuid] of ctx.index.byPath) {
-    const abs = join(contentDir, relPath);
+    const abs = join(ctx.projectRoot, relPath);
     const list = byUuid.get(uuid);
     if (list) list.push(abs);
     else byUuid.set(uuid, [abs]);

package/dist/doctor/rules/legacy-top-level-id-migration.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"legacy-top-level-id-migration.d.ts","sourceRoot":"","sources":["../../../src/doctor/rules/legacy-top-level-id-migration.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;GA0BG;AAUH,OAAO,KAAK,EAEV,UAAU,EAIX,MAAM,aAAa,CAAC;AAsGrB;;;;;;;GAOG;AACH,wBAAgB,uBAAuB,CAAC,OAAO,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,GAAG,IAAI,CAM/E;AAED,QAAA,MAAM,IAAI,EAAE,UAqGX,CAAC;AAEF,eAAe,IAAI,CAAC"}
+{"version":3,"file":"legacy-top-level-id-migration.d.ts","sourceRoot":"","sources":["../../../src/doctor/rules/legacy-top-level-id-migration.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;GA0BG;AAUH,OAAO,KAAK,EAEV,UAAU,EAIX,MAAM,aAAa,CAAC;AAsGrB;;;;;;;GAOG;AACH,wBAAgB,uBAAuB,CAAC,OAAO,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,GAAG,IAAI,CAM/E;AAED,QAAA,MAAM,IAAI,EAAE,UAoGX,CAAC;AAEF,eAAe,IAAI,CAAC"}

package/dist/doctor/rules/legacy-top-level-id-migration.js

@@ -27,7 +27,7 @@
  */
 import { readFileSync, readdirSync, statSync, writeFileSync } from 'node:fs';
 import { extname, join, relative } from 'node:path';
-import { resolveContentDir } from "../../paths.js";
+import { collectSidecarArtifactDirs } from "../../content-index.js";
 import { parseFrontmatter, removeFrontmatterPaths, updateFrontmatter, } from "../../frontmatter.js";
 const RULE_ID = 'legacy-top-level-id-migration';
 const MARKDOWN_EXTENSIONS = new Set([
@@ -139,19 +139,22 @@ const rule = {
     id: RULE_ID,
     label: 'Frontmatter id at top level should be under `deskwork:` namespace',
     async audit(ctx) {
-        const contentDir = resolveContentDir(ctx.projectRoot, ctx.config, ctx.site);
+        // Phase 39c (sites→lanes retirement): discovery is sidecar-driven —
+        // walk each entry's resolved artifact directory rather than a
+        // configured site `contentDir`. The sidecar is the SSOT; legacy
+        // top-level-id files live alongside the entries that reference them.
+        const roots = await collectSidecarArtifactDirs(ctx.projectRoot);
         const calendarIds = new Set();
         for (const e of ctx.calendar.entries) {
             if (e.id)
                 calendarIds.add(e.id);
         }
-        let files;
-        try {
-            files = collectMarkdownFiles(contentDir);
-        }
-        catch {
-            return [];
+        const seen = new Set();
+        for (const root of roots) {
+            for (const abs of collectMarkdownFiles(root))
+                seen.add(abs);
         }
+        const files = [...seen].sort();
         const findings = [];
         for (const abs of files) {
             const hit = classify(abs, calendarIds);