@descryy/core 0.5.0 → 0.5.1

package/dist/sources/git/diff.d.ts

@@ -28,6 +28,30 @@ export interface GitDiffOptions {
     /** Cap on the sum of all returned patches; files past it keep their stats. Default 40,000. */
     readonly maxTotalPatchBytes?: number;
 }
+/** One contiguous run of added lines, in the new (head-side) file. 1-based, inclusive on both ends. */
+export interface LineRange {
+    readonly start: number;
+    readonly end: number;
+}
+/**
+ * Which lines a unified-diff patch actually *added*, in new-file line numbers.
+ *
+ * C2 (UAT phase 4): `checkEnvironment`'s `NEW_READ_UNDECLARED` used to call any
+ * undeclared read in a `files`-scoped file "new", even a pre-existing read the
+ * diff never touched — this is what lets a caller ask the narrower, true
+ * question instead: is this line one the diff actually added?
+ *
+ * Parses the hunk headers (`@@ -a,b +c,d @@`) and walks each hunk counting the
+ * new-file line pointer: a `+` line claims the current pointer and advances it,
+ * a context line (or blank) advances the pointer without claiming a line, and a
+ * `-` line does neither — it consumes no new-file line — but does end any run
+ * of consecutive additions in progress, so an added block interrupted by a
+ * removed line reports as two ranges, not one spanning the gap. Takes the raw
+ * `patch` text `GitDiffFile` already carries; a `null` patch (binary, or
+ * withheld by a size budget) has nothing to parse and is the caller's problem
+ * to ask for separately — this function only ever sees text that exists.
+ */
+export declare function addedLineRanges(patch: string): readonly LineRange[];
 /** `base...head` (three dots) — two dots would include everything changed on `base` since the branch point. */
 export declare function gitDiff(cwd: string, base: string, head?: string, options?: GitDiffOptions): Promise<readonly GitDiffFile[]>;
 export interface GitWorkingTreeDiffOptions extends GitDiffOptions {

package/dist/sources/git/diff.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"diff.d.ts","sourceRoot":"","sources":["../../../src/sources/git/diff.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AA4BH,2GAA2G;AAC3G,eAAO,MAAM,gCAAgC,mCAAmC,CAAC;AAEjF,MAAM,WAAW,WAAW;IAC1B,sEAAsE;IACtE,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,sCAAsC;IACtC,QAAQ,CAAC,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IACjC,QAAQ,CAAC,MAAM,EAAE,GAAG,GAAG,GAAG,GAAG,GAAG,GAAG,GAAG,CAAC;IACvC,QAAQ,CAAC,MAAM,EAAE,OAAO,CAAC;IACzB,mFAAmF;IACnF,QAAQ,CAAC,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IAClC,QAAQ,CAAC,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IAClC,iFAAiF;IACjF,QAAQ,CAAC,KAAK,EAAE,MAAM,GAAG,IAAI,CAAC;IAC9B,kEAAkE;IAClE,QAAQ,CAAC,kBAAkB,EAAE,MAAM,GAAG,IAAI,CAAC;CAC5C;AAED,MAAM,WAAW,cAAc;IAC7B,4EAA4E;IAC5E,QAAQ,CAAC,KAAK,CAAC,EAAE,SAAS,MAAM,EAAE,CAAC;IACnC,kGAAkG;IAClG,QAAQ,CAAC,aAAa,CAAC,EAAE,MAAM,CAAC;IAChC,8FAA8F;IAC9F,QAAQ,CAAC,kBAAkB,CAAC,EAAE,MAAM,CAAC;CACtC;AA+HD,uGAAuG;AACvG,MAAM,WAAW,SAAS;IACxB,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAC;IACvB,QAAQ,CAAC,GAAG,EAAE,MAAM,CAAC;CACtB;AAID;;;;;;;;;;;;;;;;;GAiBG;AACH,wBAAgB,eAAe,CAAC,KAAK,EAAE,MAAM,GAAG,SAAS,SAAS,EAAE,CA4CnE;AAED,+GAA+G;AAC/G,wBAAsB,OAAO,CAC3B,GAAG,EAAE,MAAM,EACX,IAAI,EAAE,MAAM,EACZ,IAAI,SAAS,EACb,OAAO,GAAE,cAAmB,GAC3B,OAAO,CAAC,SAAS,WAAW,EAAE,CAAC,CAEjC;AAED,MAAM,WAAW,yBAA0B,SAAQ,cAAc;IAC/D,yGAAyG;IACzG,QAAQ,CAAC,KAAK,CAAC,EAAE,UAAU,GAAG,QAAQ,GAAG,KAAK,CAAC;CAChD;AAED;;;GAGG;AACH,wBAAsB,kBAAkB,CACtC,GAAG,EAAE,MAAM,EACX,OAAO,GAAE,yBAA8B,GACtC,OAAO,CAAC,SAAS,WAAW,EAAE,CAAC,CAIjC;AAKD,MAAM,WAAW,2BAA4B,SAAQ,yBAAyB;IAC5E;;;;;;OAMG;IACH,QAAQ,CAAC,gBAAgB,CAAC,EAAE,OAAO,CAAC;IACpC,4EAA4E;IAC5E,QAAQ,CAAC,YAAY,CAAC,EAAE,MAAM,CAAC;IAC/B;;;;;;;;;;;;OAYG;IACH,QAAQ,CAAC,OAAO,CAAC,EAAE,SAAS,MAAM,EAAE,CAAC;CACtC;AAED,MAAM,WAAW,oBAAoB;IACnC,QAAQ,CAAC,KAAK,EAAE,SAAS,WAAW,EAAE,CAAC;IACvC,6CAA6C;IAC7C,QAAQ,CAAC,cAAc,EAAE,MAAM,CAAC;IAChC,0DAA0D;IAC1D,QAAQ,CAAC,kBAAkB,EAAE,OAAO,CAAC;CACtC;AAED;;;;;;;;;;;;;;;;;;;;;;;;;;;GA2BG;AACH,wBAAsB,oBAAoB,CACxC,GAAG,EAAE,MAAM,EACX,OAAO,GAAE,2BAAgC,GACxC,OAAO,CAAC,oBAAoB,CAAC,CA6C/B"}

package/dist/sources/git/diff.js

@@ -133,6 +133,72 @@ async function runGitDiff(cwd, revisionArgs, options) {
         }),
     }).items;
 }
+const HUNK_HEADER = /^@@ -\d+(?:,\d+)? \+(\d+)(?:,\d+)? @@/;
+/**
+ * Which lines a unified-diff patch actually *added*, in new-file line numbers.
+ *
+ * C2 (UAT phase 4): `checkEnvironment`'s `NEW_READ_UNDECLARED` used to call any
+ * undeclared read in a `files`-scoped file "new", even a pre-existing read the
+ * diff never touched — this is what lets a caller ask the narrower, true
+ * question instead: is this line one the diff actually added?
+ *
+ * Parses the hunk headers (`@@ -a,b +c,d @@`) and walks each hunk counting the
+ * new-file line pointer: a `+` line claims the current pointer and advances it,
+ * a context line (or blank) advances the pointer without claiming a line, and a
+ * `-` line does neither — it consumes no new-file line — but does end any run
+ * of consecutive additions in progress, so an added block interrupted by a
+ * removed line reports as two ranges, not one spanning the gap. Takes the raw
+ * `patch` text `GitDiffFile` already carries; a `null` patch (binary, or
+ * withheld by a size budget) has nothing to parse and is the caller's problem
+ * to ask for separately — this function only ever sees text that exists.
+ */
+export function addedLineRanges(patch) {
+    const ranges = [];
+    let newLine = 0;
+    let inHunk = false;
+    let start = null;
+    let end = null;
+    const flush = () => {
+        if (start !== null && end !== null)
+            ranges.push({ start, end });
+        start = null;
+        end = null;
+    };
+    for (const line of patch.split("\n")) {
+        const header = HUNK_HEADER.exec(line);
+        if (header !== null) {
+            flush();
+            newLine = Number(header[1]);
+            inHunk = true;
+            continue;
+        }
+        if (!inHunk)
+            continue;
+        if (line.startsWith("+") && !line.startsWith("+++")) {
+            if (start === null)
+                start = newLine;
+            end = newLine;
+            newLine += 1;
+        }
+        else if (line.startsWith("-") && !line.startsWith("---")) {
+            // A deletion consumes no new-file line, but it does break a run of
+            // consecutive additions — the two sides of it are not contiguous.
+            flush();
+        }
+        else if (line.startsWith("\\")) {
+            // "" — not a line, claims no pointer.
+            continue;
+        }
+        else {
+            // Context line (or the trailing empty split element): advances the
+            // pointer, claims nothing.
+            flush();
+            newLine += 1;
+        }
+    }
+    flush();
+    return ranges;
+}
 /** `base...head` (three dots) — two dots would include everything changed on `base` since the branch point. */
 export async function gitDiff(cwd, base, head = "HEAD", options = {}) {
     return runGitDiff(cwd, [`${base}...${head}`], options);

package/dist/sources/git/diff.js.map

@@ -1 +1 @@
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package/dist/sources/git/index.d.ts

@@ -2,10 +2,10 @@ export { createGitSource, revertedShaOf, GIT_SOURCE_ID, GIT_SOURCE_VERSION, UNDI
 export type { GitSourceOptions } from "./source.ts";
 export { readHistory, gitHead, isGitRepository, GitUnavailableError, isPathTrackedByGit, filesInCommit, changedFiles, resolveCommitBySha, logForPath, } from "./history.ts";
 export type { Commit, CommitChange, HistoryOptions, PathLogCommit, PathLogOptions, PathLogResult, } from "./history.ts";
-export { gitDiff, gitWorkingTreeChange, gitWorkingTreeDiff, TOTAL_PATCH_BUDGET_REASON_PREFIX } from "./diff.ts";
+export { addedLineRanges, gitDiff, gitWorkingTreeChange, gitWorkingTreeDiff, TOTAL_PATCH_BUDGET_REASON_PREFIX, } from "./diff.ts";
 export { uncommittedAmong, workingTreeChangedFiles } from "./history.ts";
 export type { WorkingTreeFilesOptions } from "./history.ts";
-export type { GitDiffFile, GitDiffOptions, GitWorkingTreeChange, GitWorkingTreeChangeOptions, GitWorkingTreeDiffOptions, } from "./diff.ts";
+export type { GitDiffFile, GitDiffOptions, GitWorkingTreeChange, GitWorkingTreeChangeOptions, GitWorkingTreeDiffOptions, LineRange, } from "./diff.ts";
 export { detectIncidents } from "./incidents.ts";
 export type { DetectedIncident, DetectedRefusal, IncidentDetection, IncidentMechanism, UnresolvedTrailer, } from "./incidents.ts";
 //# sourceMappingURL=index.d.ts.map

package/dist/sources/git/index.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/sources/git/index.ts"],"names":[],"mappings":"AAAA,OAAO,EACL,eAAe,EACf,aAAa,EACb,aAAa,EACb,kBAAkB,EAClB,qBAAqB,GACtB,MAAM,aAAa,CAAC;AACrB,YAAY,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAEpD,OAAO,EACL,WAAW,EACX,OAAO,EACP,eAAe,EACf,mBAAmB,EACnB,kBAAkB,EAClB,aAAa,EACb,YAAY,EACZ,kBAAkB,EAClB,UAAU,GACX,MAAM,cAAc,CAAC;AACtB,YAAY,EACV,MAAM,EACN,YAAY,EACZ,cAAc,EACd,aAAa,EACb,cAAc,EACd,aAAa,GACd,MAAM,cAAc,CAAC;AAEtB,OAAO,EACL,eAAe,EACf,OAAO,EACP,oBAAoB,EACpB,kBAAkB,EAClB,gCAAgC,GACjC,MAAM,WAAW,CAAC;AACnB,OAAO,EAAE,gBAAgB,EAAE,uBAAuB,EAAE,MAAM,cAAc,CAAC;AACzE,YAAY,EAAE,uBAAuB,EAAE,MAAM,cAAc,CAAC;AAC5D,YAAY,EACV,WAAW,EACX,cAAc,EACd,oBAAoB,EACpB,2BAA2B,EAC3B,yBAAyB,EACzB,SAAS,GACV,MAAM,WAAW,CAAC;AAEnB,OAAO,EAAE,eAAe,EAAE,MAAM,gBAAgB,CAAC;AACjD,YAAY,EACV,gBAAgB,EAChB,eAAe,EACf,iBAAiB,EACjB,iBAAiB,EACjB,iBAAiB,GAClB,MAAM,gBAAgB,CAAC"}

package/dist/sources/git/index.js

@@ -1,6 +1,6 @@
 export { createGitSource, revertedShaOf, GIT_SOURCE_ID, GIT_SOURCE_VERSION, UNDIRECTED_EDGE_TYPES, } from "./source.js";
 export { readHistory, gitHead, isGitRepository, GitUnavailableError, isPathTrackedByGit, filesInCommit, changedFiles, resolveCommitBySha, logForPath, } from "./history.js";
-export { gitDiff, gitWorkingTreeChange, gitWorkingTreeDiff, TOTAL_PATCH_BUDGET_REASON_PREFIX } from "./diff.js";
+export { addedLineRanges, gitDiff, gitWorkingTreeChange, gitWorkingTreeDiff, TOTAL_PATCH_BUDGET_REASON_PREFIX, } from "./diff.js";
 export { uncommittedAmong, workingTreeChangedFiles } from "./history.js";
 export { detectIncidents } from "./incidents.js";
 //# sourceMappingURL=index.js.map

package/dist/sources/git/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../src/sources/git/index.ts"],"names":[],"mappings":"AAAA,OAAO,EACL,eAAe,EACf,aAAa,EACb,aAAa,EACb,kBAAkB,EAClB,qBAAqB,GACtB,MAAM,aAAa,CAAC;AAGrB,OAAO,EACL,WAAW,EACX,OAAO,EACP,eAAe,EACf,mBAAmB,EACnB,kBAAkB,EAClB,aAAa,EACb,YAAY,EACZ,kBAAkB,EAClB,UAAU,GACX,MAAM,cAAc,CAAC;AAUtB,OAAO,EACL,eAAe,EACf,OAAO,EACP,oBAAoB,EACpB,kBAAkB,EAClB,gCAAgC,GACjC,MAAM,WAAW,CAAC;AACnB,OAAO,EAAE,gBAAgB,EAAE,uBAAuB,EAAE,MAAM,cAAc,CAAC;AAWzE,OAAO,EAAE,eAAe,EAAE,MAAM,gBAAgB,CAAC"}

package/dist/validation/env.d.ts

@@ -137,15 +137,29 @@
  * own coverage guard exists to prevent — the same near-total-precision
  * discipline, just moved to a different precondition.
  *
- * A pre-existing read in a file the diff also touches counts as "new" here,
- * the same file-level honesty `contracts`' `paths` and this check's own
- * `files` scope already carry elsewhere — this check does not have line-level
- * diff information to do better, and says so via the same scope disclosure
- * every `files`-scoped call already emits.
+ * A pre-existing read in a file the diff also touches counted as "new" here
+ * unconditionally, until C2 (UAT phase 4, field-report round): a two-line,
+ * unrelated addition to a file that also happened to contain an untouched,
+ * long-standing undeclared read reported that read as "a new read this
+ * change introduces" — a `defect` claim the diff did not support. `files`
+ * alone can only ever say *which file*, never *which line*, so the fix is an
+ * optional second input: `options.changedLines`, the added-line ranges of a
+ * real diff (`addedLineRanges` over `get_git_diff`/`pr_analysis`'s own patch
+ * text), keyed by the same repo-relative paths as `files`. When a scoped
+ * read's file has an entry there, this rule asks the narrower, true question
+ * — does *this line* fall inside a range the diff actually added — instead of
+ * the file-level one, and says nothing at all about a read the diff proves is
+ * pre-existing.
+ *
+ * `changedLines` is optional and per-file: a file present in `files` but
+ * absent from the map is reported exactly as this check behaved before C2 —
+ * a `lead`, not a `defect`, and worded without the "new" claim, because no
+ * line-level information exists to support either. The scope disclosure below
+ * says which case applied and to how many variables.
  *
  * Deduplicated against `REQUIRED_NOT_DECLARED`: a variable this rule already
- * flagged is skipped by that one, so a required, undeclared, diff-scoped read
- * is reported once, not twice, by the stronger of the two rules.
+ * flagged — `defect` or `lead` — is skipped by that one, so a required,
+ * undeclared, diff-scoped read is reported once, not twice.
  *
  * ## Resolution, and why a config read is not R0
  *
@@ -275,6 +289,25 @@ export interface EnvCheckOptions {
     readonly files?: readonly string[];
     /** Cap on file nodes enumerated. Truncation is reported. */
     readonly limit?: number;
+    /**
+     * Which lines the diff actually added, by repo-relative file — e.g. from
+     * `addedLineRanges` over a real patch (`get_git_diff`/`pr_analysis` already
+     * compute the diff this would come from). When given, `NEW_READ_UNDECLARED`
+     * only fires for an undeclared read whose line falls inside one of these
+     * ranges for its file — a verified "new in this diff", not merely "in a
+     * file this call scoped to". C2 (UAT phase 4): without line information the
+     * old rule called any undeclared read in a scoped file "new", including one
+     * a diff never went near.
+     *
+     * A file present in `files` but absent from this map is treated the same as
+     * when this option is omitted entirely: no diff information was available
+     * for it, so a would-be finding there falls back to a `lead`, worded
+     * without an authorship claim, rather than a `defect` — see the header.
+     */
+    readonly changedLines?: ReadonlyMap<string, readonly {
+        readonly start: number;
+        readonly end: number;
+    }[]>;
 }
 export declare const DEFAULT_COVERAGE_FLOOR = 0.6;
 /**

package/dist/validation/env.d.ts.map

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package/dist/validation/env.js

@@ -137,15 +137,29 @@
  * own coverage guard exists to prevent — the same near-total-precision
  * discipline, just moved to a different precondition.
  *
- * A pre-existing read in a file the diff also touches counts as "new" here,
- * the same file-level honesty `contracts`' `paths` and this check's own
- * `files` scope already carry elsewhere — this check does not have line-level
- * diff information to do better, and says so via the same scope disclosure
- * every `files`-scoped call already emits.
+ * A pre-existing read in a file the diff also touches counted as "new" here
+ * unconditionally, until C2 (UAT phase 4, field-report round): a two-line,
+ * unrelated addition to a file that also happened to contain an untouched,
+ * long-standing undeclared read reported that read as "a new read this
+ * change introduces" — a `defect` claim the diff did not support. `files`
+ * alone can only ever say *which file*, never *which line*, so the fix is an
+ * optional second input: `options.changedLines`, the added-line ranges of a
+ * real diff (`addedLineRanges` over `get_git_diff`/`pr_analysis`'s own patch
+ * text), keyed by the same repo-relative paths as `files`. When a scoped
+ * read's file has an entry there, this rule asks the narrower, true question
+ * — does *this line* fall inside a range the diff actually added — instead of
+ * the file-level one, and says nothing at all about a read the diff proves is
+ * pre-existing.
+ *
+ * `changedLines` is optional and per-file: a file present in `files` but
+ * absent from the map is reported exactly as this check behaved before C2 —
+ * a `lead`, not a `defect`, and worded without the "new" claim, because no
+ * line-level information exists to support either. The scope disclosure below
+ * says which case applied and to how many variables.
  *
  * Deduplicated against `REQUIRED_NOT_DECLARED`: a variable this rule already
- * flagged is skipped by that one, so a required, undeclared, diff-scoped read
- * is reported once, not twice, by the stronger of the two rules.
+ * flagged — `defect` or `lead` — is skipped by that one, so a required,
+ * undeclared, diff-scoped read is reported once, not twice.
  *
  * ## Resolution, and why a config read is not R0
  *
@@ -319,34 +333,83 @@ export function checkEnvironment(provider, scan, options = {}) {
     const findings = [];
     // UAT round 3, Suggestion 4 — see the header. Fires only when `options.files`
     // scoped this call to a diff: `reads` above is already restricted to it, so
-    // every entry here is "new in this diff" by construction. Not gated by
+    // every entry here is at least "in a file this call scoped to". Not gated by
     // `CoverageGuard` at all — that guard protects a different quantity
     // (whether the *required-read* denominator is large enough to trust a
-    // ratio), and this rule's precision comes entirely from the diff scope,
-    // per the header's own reasoning.
+    // ratio), and this rule's precision comes from the diff scope (and, where
+    // `changedLines` is given, the line range within it) per the header.
     const diffFlagged = new Set();
+    // C2 (UAT phase 4): only the names actually verified against a real added
+    // line — used to pick the wording/claim, never to change the dedup above,
+    // which stays keyed on `diffFlagged` so a variable this rule reports at all
+    // (defect or lead) is still not also reported by `REQUIRED_NOT_DECLARED`.
+    const diffFlaggedVerified = new Set();
     if (scoped !== null) {
-        const firstReadOf = new Map();
+        const changedLines = options.changedLines;
+        const readsByName = new Map();
         for (const read of reads) {
-            const existing = firstReadOf.get(read.name);
-            if (existing === undefined || read.file < existing.file)
-                firstReadOf.set(read.name, read);
+            let sites = readsByName.get(read.name);
+            if (sites === undefined)
+                readsByName.set(read.name, (sites = []));
+            sites.push(read);
         }
-        for (const [name, read] of firstReadOf) {
+        const byFileThenLine = (a, b) => a.file.localeCompare(b.file) || a.line - b.line;
+        for (const [name, sites] of readsByName) {
             if (declaredAt.has(name))
                 continue;
+            let citation;
+            let verified = false;
+            if (changedLines === undefined) {
+                // No diff information anywhere in this call — every site is equally
+                // "in scope, unknown recency". Same site-choice as before C2.
+                citation = [...sites].sort(byFileThenLine)[0];
+            }
+            else {
+                const inAddedRange = sites
+                    .filter((r) => {
+                    const ranges = changedLines.get(r.file);
+                    return ranges !== undefined && ranges.some((rg) => r.line >= rg.start && r.line <= rg.end);
+                })
+                    .sort(byFileThenLine);
+                if (inAddedRange.length > 0) {
+                    citation = inAddedRange[0];
+                    verified = true;
+                }
+                else {
+                    // Nothing verified new. Fall back only for a site whose own file has
+                    // no diff information at all — a site whose file *does* have ranges
+                    // and still did not match is proven pre-existing, and says nothing.
+                    citation = sites.filter((r) => changedLines.get(r.file) === undefined).sort(byFileThenLine)[0];
+                }
+            }
+            if (citation === undefined)
+                continue;
             diffFlagged.add(name);
-            const where = read.line > 0 ? `${read.file}:${read.line}` : read.file;
+            if (verified)
+                diffFlaggedVerified.add(name);
+            const where = citation.line > 0 ? `${citation.file}:${citation.line}` : citation.file;
             findings.push({
                 kind: "NEW_READ_UNDECLARED",
                 name,
-                claim: "defect",
-                detail: `${name} is read at ${where}, a file this call scoped to, and no configuration file in ` +
-                    "this repository declares it anywhere. This is a new read this change introduces, not a " +
-                    "claim about whether the accessor fails when the variable is absent — see " +
-                    "REQUIRED_NOT_DECLARED for that rule.",
-                evidence: [{ file: read.file, line: read.line, says: "read here, in a file this call scoped to" }],
-                resolution: Math.min(DECLARATIVE_RESOLUTION, read.resolution),
+                claim: verified ? "defect" : "lead",
+                detail: verified
+                    ? `${name} is read at ${where}, a file this call scoped to, and no configuration file in ` +
+                        "this repository declares it anywhere. This is a new read this change introduces, not a " +
+                        "claim about whether the accessor fails when the variable is absent — see " +
+                        "REQUIRED_NOT_DECLARED for that rule."
+                    : `${name} is read at ${where}, in a file this call scoped to, and no configuration file ` +
+                        "declares it. This is not a claim about whether the accessor fails when the variable is " +
+                        "absent — see REQUIRED_NOT_DECLARED for that rule — and it is not a claim that this read " +
+                        "is new: no line-level diff information was available for this file, so a pre-existing " +
+                        "read here is reported the same as one the change just added.",
+                evidence: [
+                    {
+                        file: citation.file,
+                        line: citation.line,
+                        says: verified ? "added by the diff, here" : "read here, in a file this call scoped to",
+                    },
+                ],
+                resolution: Math.min(DECLARATIVE_RESOLUTION, citation.resolution),
             });
         }
     }
@@ -379,12 +442,23 @@ export function checkEnvironment(provider, scan, options = {}) {
     }
     // Documentation drift, between same-application files only. Gated on the same
     // floor: an example file documenting almost nothing is a fact about the file.
+    //
+    // C4 (UAT phase 4): the *scan* of .env/.env-example stays repository-wide —
+    // a declaration is repository-wide regardless of what changed, and the
+    // coverage ratio below is computed over that same repo-wide set so a scoped
+    // call cannot flip whether this section reports at all. Only *emission* is
+    // scoped: when `files` was given, a variable nothing in scope reads is not
+    // this call's business to report, the same way the read side above already
+    // narrows itself. `namedVariables` is already exactly "read by a scoped
+    // file" by construction (the read-side loop above skips unscoped files
+    // before it is populated), so no separate scoping pass is needed here.
     const undocumented = [...dotenvSet.keys()].filter((n) => !dotenvExample.has(n));
     if (dotenvExample.size > 0 && dotenvSet.size > 0) {
         const documented = dotenvSet.size - undocumented.length;
         const ratio = documented / dotenvSet.size;
         if (ratio >= floor) {
-            for (const name of undocumented) {
+            const emitted = scoped === null ? undocumented : undocumented.filter((n) => namedVariables.has(n));
+            for (const name of emitted) {
                 const evidence = dotenvSet.get(name);
                 if (evidence === undefined)
                     continue;
@@ -399,6 +473,11 @@ export function checkEnvironment(provider, scan, options = {}) {
                     resolution: DECLARATIVE_RESOLUTION,
                 });
             }
+            if (scoped !== null && emitted.length < undocumented.length) {
+                notes.push(`${undocumented.length - emitted.length} further variable(s) are set and undocumented ` +
+                    "elsewhere in this repository; they are not listed because no file this call scoped to " +
+                    "reads them.");
+            }
         }
         else {
             notes.push(`${undocumented.length} variable(s) are set in a configuration file and documented in no ` +
@@ -480,12 +559,19 @@ export function checkEnvironment(provider, scan, options = {}) {
     if (scoped !== null) {
         notes.push(`The read side was restricted to ${scoped.size} scoped file(s). Configuration files were ` +
             "read in full, because a declaration is repository-wide regardless of what changed.");
-        if (diffFlagged.size > 0) {
-            notes.push(`${diffFlagged.size} variable(s) read in these scoped file(s) are declared nowhere: ` +
-                `${[...diffFlagged].sort().join(", ")} — see NEW_READ_UNDECLARED in findings. Scoped at ` +
-                'file granularity, like every other check here that takes "files": a pre-existing read ' +
-                "in a file this call also scoped counts as new, since this check has no line-level diff " +
-                "information to do better.");
+        if (diffFlaggedVerified.size > 0) {
+            notes.push(`${diffFlaggedVerified.size} variable(s) read on a line the diff actually added in these ` +
+                `scoped file(s) are declared nowhere: ${[...diffFlaggedVerified].sort().join(", ")} — see ` +
+                "NEW_READ_UNDECLARED in findings, reported as a defect.");
+        }
+        const diffFlaggedFallback = [...diffFlagged].filter((name) => !diffFlaggedVerified.has(name));
+        if (diffFlaggedFallback.length > 0) {
+            notes.push(`${diffFlaggedFallback.length} further variable(s) read in these scoped file(s) are declared ` +
+                `nowhere, with no line-level diff information available to confirm the read is new: ` +
+                `${diffFlaggedFallback.sort().join(", ")} — see NEW_READ_UNDECLARED in findings, reported as ` +
+                'a lead rather than a defect. Scoped at file granularity, like every other check here that ' +
+                'takes "files": a pre-existing read in a file this call also scoped is reported the same as ' +
+                "one the change just added, because no diff was passed to tell them apart.");
         }
     }
     if (kept.length < findings.length) {

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package/dist/validation/index.d.ts

@@ -11,6 +11,8 @@ export { checkRollbackReadiness, readMigrationOps } from "./rollback.ts";
 export type { RollbackFinding, RollbackOptions, RollbackReport } from "./rollback.ts";
 export { checkRouteDrift } from "./route-drift.ts";
 export type { DriftOptions, DriftReport, DriftRoute, Introspection } from "./route-drift.ts";
+export { ancestorInitPaths, checkOrmModelRegistration } from "./orm-registration.ts";
+export type { OrmRegistrationFinding, OrmRegistrationFindingKind, OrmRegistrationOptions, OrmRegistrationReport, } from "./orm-registration.ts";
 export { runJoinSubstitutionControl } from "./join-substitution.ts";
 export type { FlaggedSubstitution, JoinSubstitutionOptions, JoinSubstitutionReport, SubstitutionCaller, SubstitutionRoute, SubstitutionUncontrollable, UnreproducibleJoin, } from "./join-substitution.ts";
 export { scanConfigSurfaces, skipDirectory, readDotenv, readImageBuild, readStructured, readWranglerVars, readWranglerVarsEntries, } from "./sources.ts";

package/dist/validation/index.d.ts.map

@@ -1 +1 @@
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package/dist/validation/index.js

@@ -5,6 +5,7 @@ export { checkAttributeExistence, readUnresolvedFields } from "./attributes.js";
 export { buildConfigGraph } from "./config-graph.js";
 export { checkRollbackReadiness, readMigrationOps } from "./rollback.js";
 export { checkRouteDrift } from "./route-drift.js";
+export { ancestorInitPaths, checkOrmModelRegistration } from "./orm-registration.js";
 export { runJoinSubstitutionControl } from "./join-substitution.js";
 export { scanConfigSurfaces, skipDirectory, readDotenv, readImageBuild, readStructured, readWranglerVars, readWranglerVarsEntries, } from "./sources.js";
 export { checkEnvironment, readEnvReads, DEFAULT_COVERAGE_FLOOR } from "./env.js";

package/dist/validation/index.js.map

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package/dist/validation/orm-registration.d.ts

@@ -0,0 +1,106 @@
+/** ORM model registration — the UAT phase-4 audit's "Bug B": a SQLAlchemy-style model
+ *  class inherits the declarative base but is defined in a module no `__init__.py` in
+ *  its own package imports. A package's `__init__.py` conventionally re-imports every
+ *  model module specifically so `Base.metadata` — the registry `alembic
+ *  --autogenerate` reads — actually includes them; miss the import and the model is
+ *  invisible to that registry. Alembic then sees a table the database has but the
+ *  declared models don't, and `--autogenerate` writes a migration that **drops** it.
+ *
+ *  Both edges this reuses are already produced elsewhere in the pipeline, never
+ *  reinvented here: `INHERITS` (a class descending from a base) and `IMPORTS`
+ *  (whether a package's `__init__.py` reaches the defining module).
+ *
+ *  ## Recognising "inherits the ORM declarative base" without naming a framework
+ *
+ *  Core carries no notion of "SQLAlchemy" or "Django" above the IR boundary (rule 1),
+ *  and a name check on the base class ("is it called `Base`?") is exactly the kind of
+ *  heuristic rule 2 forbids. The one signal already on the graph that says "this
+ *  class's inheritance chain reaches an ORM declarative base" is the extractor's own
+ *  `MODEL` classification: per the golden corpus (`fixtures/golden/patterns.json`,
+ *  patterns 06/07) and `capabilities.ts`'s `ORM_EXTRACTOR` doc comment, `MODEL` is
+ *  minted *because* the extractor found "a persistence annotation, a declarative
+ *  base, a table binding" — never a name match. So this check's recognition rule is:
+ *  **a `MODEL` node with at least one outgoing `INHERITS` edge** is, by construction
+ *  of the extractor that classified it, a class inheriting the ORM declarative base.
+ *
+ *  An abstract intermediate class that maps no column of its own is not itself
+ *  promoted to `MODEL` — see the `Base`/`Order` example in
+ *  `fixtures/languages/python/src/models.py`, where the comment on `Base` reads
+ *  "maps no column, so it is not itself a model." So an abstract base is never a seed
+ *  here, which is exactly the "don't flag an abstract intermediate the same way as a
+ *  concrete leaf model" distinction — it falls out of reusing the existing `MODEL`
+ *  classification rather than needing separate chain-walking logic.
+ *
+ *  ## Reachability: "own package's `__init__.py`, walking up, transitively"
+ *
+ *  `IMPORTS` is file-level (vocabulary.ts), so both endpoints are `MODULE`/`FILE`
+ *  nodes (`fileScopedNodes`). For a model defined in `a/b/model.py`, the candidate
+ *  aggregators are `a/b/__init__.py`, `a/__init__.py`, `__init__.py` — every ancestor
+ *  package's own `__init__.py`, not only the immediate one: a nested package can be
+ *  reached solely through a parent's `__init__` re-export. Reachability is `bfs`
+ *  (`../query/traverse.ts`, the same transitive-reachability primitive
+ *  `impactOf`/`testsCovering` already use), seeded at whichever of those candidate
+ *  paths actually have a MODULE/FILE node in this graph, walking `IMPORTS` outward
+ *  with no depth cap (only the node budget). An `__init__.py` that imports a
+ *  `models_registry.py` that in turn imports the model module is therefore reached —
+ *  exactly the false-positive shape the design review called out: this traversal is
+ *  not restricted to direct imports.
+ *
+ *  ## Why this is a lead, never a defect
+ *
+ *  `Base.metadata` can be populated by an explicit scan/glob instead of manual
+ *  imports (this check cannot see that from the graph), a model can be an
+ *  intentionally unmigrated abstract/mixin base, or deliberately excluded from
+ *  migrations for now. Promoting straight to `defect` needs a measured precision
+ *  this check has not been run against yet — the same discipline this codebase
+ *  already holds itself to elsewhere (a heuristic measured at 25% precision against
+ *  a 90% bar was not shipped as a defect). So every finding here carries
+ *  `claim: "lead"` and says so in its own text, never promoted silently. */
+import type { ResolutionLevel } from "@descryy/ir";
+import type { ContractClaim } from "../contracts/orphans.ts";
+import type { AdjacencyProvider, QueryResult } from "../query/provider.ts";
+export type OrmRegistrationFindingKind = "MODEL_NOT_REACHED_BY_INIT";
+export interface OrmRegistrationFinding {
+    readonly kind: OrmRegistrationFindingKind;
+    /** Always "lead" today — see the header's "Why this is a lead, never a defect". */
+    readonly claim: ContractClaim;
+    readonly model: string;
+    readonly modelId: string;
+    readonly file: string;
+    readonly line: number;
+    /** The sentence a developer reads, including the reasoning for `claim: "lead"`. */
+    readonly detail: string;
+    readonly resolution: ResolutionLevel;
+}
+export interface OrmRegistrationReport {
+    readonly findings: readonly OrmRegistrationFinding[];
+    /** The count before `maxFindings` capped it — P27's disclosed remainder: a structured field, not only a prose note. */
+    readonly findingsTotal: number;
+    readonly examined: {
+        /** MODEL nodes with at least one outgoing INHERITS edge — this check's population. */
+        readonly candidates: number;
+    };
+    /** True when at least one candidate was examined. */
+    readonly ran: boolean;
+    readonly withheld: {
+        /** A candidate whose package tree carries no `__init__.py` node anywhere in this
+         *  graph — nothing to check reachability against, so refused rather than guessed. */
+        readonly noInitInPackage: number;
+    };
+}
+export interface OrmRegistrationOptions {
+    /** Restrict candidates to these repo-relative files. Reachability is still resolved
+     *  against the whole graph — a reaching `__init__.py` commonly sits outside the diff. */
+    readonly files?: readonly string[];
+    readonly maxFindings?: number;
+    /** Cap on MODEL/file-scoped nodes enumerated. Truncation is reported. */
+    readonly limit?: number;
+    /** Node budget per candidate's reachability traversal. */
+    readonly budget?: number;
+}
+/** Every `__init__.py` path that could aggregate `file`'s module: its own package's,
+ *  and every ancestor package's, own package first. Pure path arithmetic — whether any
+ *  of these actually exist as a node in the graph is decided by the caller. */
+export declare function ancestorInitPaths(file: string): readonly string[];
+export declare function checkOrmModelRegistration(provider: AdjacencyProvider, options?: OrmRegistrationOptions): QueryResult<OrmRegistrationReport>;
+//# sourceMappingURL=orm-registration.d.ts.map

package/dist/validation/orm-registration.d.ts.map

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package/dist/validation/orm-registration.js

@@ -0,0 +1,191 @@
+/** ORM model registration — the UAT phase-4 audit's "Bug B": a SQLAlchemy-style model
+ *  class inherits the declarative base but is defined in a module no `__init__.py` in
+ *  its own package imports. A package's `__init__.py` conventionally re-imports every
+ *  model module specifically so `Base.metadata` — the registry `alembic
+ *  --autogenerate` reads — actually includes them; miss the import and the model is
+ *  invisible to that registry. Alembic then sees a table the database has but the
+ *  declared models don't, and `--autogenerate` writes a migration that **drops** it.
+ *
+ *  Both edges this reuses are already produced elsewhere in the pipeline, never
+ *  reinvented here: `INHERITS` (a class descending from a base) and `IMPORTS`
+ *  (whether a package's `__init__.py` reaches the defining module).
+ *
+ *  ## Recognising "inherits the ORM declarative base" without naming a framework
+ *
+ *  Core carries no notion of "SQLAlchemy" or "Django" above the IR boundary (rule 1),
+ *  and a name check on the base class ("is it called `Base`?") is exactly the kind of
+ *  heuristic rule 2 forbids. The one signal already on the graph that says "this
+ *  class's inheritance chain reaches an ORM declarative base" is the extractor's own
+ *  `MODEL` classification: per the golden corpus (`fixtures/golden/patterns.json`,
+ *  patterns 06/07) and `capabilities.ts`'s `ORM_EXTRACTOR` doc comment, `MODEL` is
+ *  minted *because* the extractor found "a persistence annotation, a declarative
+ *  base, a table binding" — never a name match. So this check's recognition rule is:
+ *  **a `MODEL` node with at least one outgoing `INHERITS` edge** is, by construction
+ *  of the extractor that classified it, a class inheriting the ORM declarative base.
+ *
+ *  An abstract intermediate class that maps no column of its own is not itself
+ *  promoted to `MODEL` — see the `Base`/`Order` example in
+ *  `fixtures/languages/python/src/models.py`, where the comment on `Base` reads
+ *  "maps no column, so it is not itself a model." So an abstract base is never a seed
+ *  here, which is exactly the "don't flag an abstract intermediate the same way as a
+ *  concrete leaf model" distinction — it falls out of reusing the existing `MODEL`
+ *  classification rather than needing separate chain-walking logic.
+ *
+ *  ## Reachability: "own package's `__init__.py`, walking up, transitively"
+ *
+ *  `IMPORTS` is file-level (vocabulary.ts), so both endpoints are `MODULE`/`FILE`
+ *  nodes (`fileScopedNodes`). For a model defined in `a/b/model.py`, the candidate
+ *  aggregators are `a/b/__init__.py`, `a/__init__.py`, `__init__.py` — every ancestor
+ *  package's own `__init__.py`, not only the immediate one: a nested package can be
+ *  reached solely through a parent's `__init__` re-export. Reachability is `bfs`
+ *  (`../query/traverse.ts`, the same transitive-reachability primitive
+ *  `impactOf`/`testsCovering` already use), seeded at whichever of those candidate
+ *  paths actually have a MODULE/FILE node in this graph, walking `IMPORTS` outward
+ *  with no depth cap (only the node budget). An `__init__.py` that imports a
+ *  `models_registry.py` that in turn imports the model module is therefore reached —
+ *  exactly the false-positive shape the design review called out: this traversal is
+ *  not restricted to direct imports.
+ *
+ *  ## Why this is a lead, never a defect
+ *
+ *  `Base.metadata` can be populated by an explicit scan/glob instead of manual
+ *  imports (this check cannot see that from the graph), a model can be an
+ *  intentionally unmigrated abstract/mixin base, or deliberately excluded from
+ *  migrations for now. Promoting straight to `defect` needs a measured precision
+ *  this check has not been run against yet — the same discipline this codebase
+ *  already holds itself to elsewhere (a heuristic measured at 25% precision against
+ *  a 90% bar was not shipped as a defect). So every finding here carries
+ *  `claim: "lead"` and says so in its own text, never promoted silently. */
+import { bfs } from "../query/traverse.js";
+import { fileScopedNodes } from "./nodes.js";
+const DEFAULT_MAX_FINDINGS = 25;
+const DEFAULT_TRAVERSAL_BUDGET = 500;
+/** Every `__init__.py` path that could aggregate `file`'s module: its own package's,
+ *  and every ancestor package's, own package first. Pure path arithmetic — whether any
+ *  of these actually exist as a node in the graph is decided by the caller. */
+export function ancestorInitPaths(file) {
+    const parts = file.split("/");
+    parts.pop(); // drop the file's own name
+    const paths = [];
+    for (let i = parts.length; i >= 0; i -= 1) {
+        const dir = parts.slice(0, i).join("/");
+        paths.push(dir === "" ? "__init__.py" : `${dir}/__init__.py`);
+    }
+    return paths;
+}
+export function checkOrmModelRegistration(provider, options = {}) {
+    const maxFindings = options.maxFindings ?? DEFAULT_MAX_FINDINGS;
+    const budget = options.budget ?? DEFAULT_TRAVERSAL_BUDGET;
+    const scoped = options.files === undefined ? null : new Set(options.files);
+    const notes = [];
+    const moduleFiles = fileScopedNodes(provider, options.limit);
+    const moduleIdByPath = new Map();
+    for (const node of moduleFiles.nodes) {
+        if (node.file !== null)
+            moduleIdByPath.set(node.file, node.id);
+    }
+    const modelSet = provider.nodesOfType("MODEL", options.limit);
+    const findings = [];
+    let candidates = 0;
+    let noInitInPackage = 0;
+    let anyTraversalTruncated = false;
+    for (const model of modelSet.nodes) {
+        if (model.file === null)
+            continue; // fileless — no package to reason about.
+        if (scoped !== null && !scoped.has(model.file))
+            continue;
+        // Recognition: a MODEL with no INHERITS edge was classified from a persistence
+        // annotation or table binding alone, not an inheritance chain — see the header.
+        const inherits = provider.outgoing(model.id, { types: ["INHERITS"] });
+        if (inherits.length === 0)
+            continue;
+        candidates += 1;
+        const ownModuleId = moduleIdByPath.get(model.file);
+        if (ownModuleId === undefined)
+            continue; // no MODULE/FILE node for its own file — IMPORTS is unreasoned-about here.
+        const initSeeds = ancestorInitPaths(model.file)
+            .map((path) => moduleIdByPath.get(path))
+            .filter((id) => id !== undefined);
+        if (initSeeds.length === 0) {
+            noInitInPackage += 1;
+            continue;
+        }
+        const outcome = bfs(provider, initSeeds, { types: ["IMPORTS"], direction: "out", budget });
+        if (outcome.truncated)
+            anyTraversalTruncated = true;
+        const reached = new Set(outcome.reached.map((r) => r.id));
+        if (reached.has(ownModuleId))
+            continue; // reached, directly or transitively — clean.
+        const base = provider.node(inherits[0].to);
+        const baseName = base?.name ?? "its declarative base";
+        const where = model.range === null ? model.file : `${model.file}:${model.range.startLine}`;
+        findings.push({
+            kind: "MODEL_NOT_REACHED_BY_INIT",
+            claim: "lead",
+            model: model.name,
+            modelId: model.id,
+            file: model.file,
+            line: model.range?.startLine ?? 0,
+            detail: `${model.name} (${where}) inherits ${baseName}, the ORM declarative base, but no ` +
+                "__init__.py in its own package — or an ancestor package's — imports the module that " +
+                "defines it, directly or transitively. If this model needs to be picked up by " +
+                "migrations, it may be silently invisible to them: the same shape as a model that never " +
+                "reaches Base.metadata and has its table dropped by the next autogenerate run. This is a " +
+                "lead, not a defect: a model registered through an explicit scan/glob rather than by " +
+                "import, or one deliberately excluded (an abstract/mixin base, or a model not yet wired " +
+                "into migrations), is expected to trigger this without being a bug.",
+            resolution: Math.min(model.resolution, inherits[0].resolution, outcome.resolutionFloor),
+        });
+    }
+    findings.sort((a, b) => a.file.localeCompare(b.file) || a.model.localeCompare(b.model));
+    const kept = findings.slice(0, maxFindings);
+    const ran = candidates > 0;
+    if (!ran) {
+        notes.push("No MODEL node in the graph carries an outgoing INHERITS edge, so nothing was checked for " +
+            "package-import reachability. This check treats a MODEL node with at least one INHERITS " +
+            "edge as a class inheriting an ORM declarative base; either no such class exists in this " +
+            "graph, or no adapter emitted both the MODEL classification and the INHERITS edge on this " +
+            "run. This is not a result of every model being correctly wired to its package's __init__.");
+    }
+    if (noInitInPackage > 0) {
+        notes.push(`${noInitInPackage} candidate(s) sit in a package with no __init__.py node anywhere in its ` +
+            "ancestor chain in this graph, so reachability from a package aggregator could not be " +
+            "evaluated at all and nothing was reported for them. Absence of a finding here is not " +
+            "evidence that they are wired in.");
+    }
+    if (scoped !== null) {
+        notes.push(`Candidates were restricted to ${scoped.size} scoped file(s), by the file the model class ` +
+            "is defined in. Reachability is still resolved against the whole graph, because the " +
+            "reaching __init__.py commonly sits outside the diff.");
+    }
+    if (kept.length < findings.length) {
+        notes.push(`${findings.length - kept.length} further finding(s) were withheld: a report is capped at ` +
+            `${maxFindings} so a short list stays worth reading. They were found, not missed.`);
+    }
+    if (anyTraversalTruncated) {
+        notes.push("At least one reachability traversal hit its node budget before finishing. A model reported " +
+            "here as unreached may in fact be reached by a path this run did not get to walk.");
+    }
+    if (modelSet.truncated || moduleFiles.truncated) {
+        notes.push("More MODEL or file-scoped nodes exist in the graph than were enumerated, so this check " +
+            "covers a prefix of the repository rather than all of it.");
+    }
+    let resolutionFloor = 4;
+    for (const finding of kept)
+        if (finding.resolution < resolutionFloor)
+            resolutionFloor = finding.resolution;
+    const stamp = { ...provider.baseStamp(), resolutionFloor };
+    return {
+        data: {
+            findings: kept,
+            findingsTotal: findings.length,
+            examined: { candidates },
+            ran,
+            withheld: { noInitInPackage },
+        },
+        stamp,
+        truncated: modelSet.truncated || moduleFiles.truncated || anyTraversalTruncated || kept.length < findings.length,
+        notes,
+    };
+}
+//# sourceMappingURL=orm-registration.js.map

package/dist/validation/orm-registration.js.map

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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@descryy/core",
-  "version": "0.5.0",
+  "version": "0.5.1",
   "type": "module",
   "description": "Descry graph engine: storage, graph builder, query layer, traversal, diff scoping, git source, MCP server.",
   "license": "MIT",
@@ -33,6 +33,6 @@
     "build": "tsc -b"
   },
   "dependencies": {
-    "@descryy/ir": "0.5.0"
+    "@descryy/ir": "0.5.1"
   }
 }