@descryy/core 0.3.0 → 0.5.0

package/dist/store/writer.js

@@ -1,62 +1,6 @@
 /**
- * The batch writer — DEC-015.
- *
- * "The writer deletes everything previously written by `producedBy` for
- * `sourceFiles`, then inserts, in one transaction." That sentence hides three
- * decisions the decision entry does not make, and getting any of them wrong
- * loses data silently. They are made here and each is tested.
- *
- * ## 1. Invalidation matches on adapter *id* and *repo*, not `producedBy` alone
- *
- * `producedBy` is `id@version`. Matching the full string would mean an adapter
- * upgrade never invalidates anything the old version wrote — the two producers
- * would simply coexist, and the graph would hold both readings of every file
- * forever. §24.1 is explicit: "an adapter version bump invalidates every node
- * and edge that adapter produced". So overlap is computed on the id, and the
- * version is what makes the *stale* rows recognisable.
- *
- * `repo` is a second, equally load-bearing part of the same match, added after
- * a real defect: a store holding more than one repository (`descry-runtime`'s
- * graph correlator merges a frontend and a backend into one store to trace
- * across them, per DEC-228) can have two repos using the same adapter with an
- * overlapping relative file path — `src/index.ts`, `package.json`, anything
- * common. Without `repo` in this match, writing the second repo's batch reads
- * as "adapter X re-ran over a file it already owned" and evicts the first
- * repo's run outright — silent cross-repository data loss, not a wrong
- * answer. `invalidateAdapter` below is intentionally *not* repo-scoped — its
- * own contract is "every repo," a different, explicitly global operation.
- *
- * ## 2. Prior runs are matched by file-set *overlap*, not equality
- *
- * A batch is the unit of invalidation, but the batch that previously owned a
- * file may have covered a different set of files. Deleting only exact-matching
- * runs leaves two rows for the same symbol; deleting only the intersection is
- * impossible, because an edge has no file. So every prior run of the same
- * adapter that touches *any* of these files is replaced whole — and the files
- * it covered that this batch does not re-supply are reported as `evictedFiles`.
- * Reporting them is the honest-degradation rule (principle 7): the caller is
- * told what fell out, rather than discovering it as a missing edge next week.
- *
- * ## 3. A run also cleans up after its own previous write
- *
- * The run id is content-derived from producer, repo, commit and file set — not
- * from the nodes. So an adapter re-run at the same commit over the same files
- * lands on the *same* run id, and "delete the prior runs" excludes it by
- * definition. Without a self-clean pass, rows that run no longer produces stay
- * forever: the upsert refreshes what is still there and nothing removes what is
- * not. Every write therefore ends by deleting its own run's rows that this batch
- * did not supply.
- *
- * ## 4. Re-supplied nodes are updated, not deleted and recreated
- *
- * A node id is stable across file moves by construction (DEC-004), so re-parsing
- * a file normally yields the ids that were already there. Deleting a prior run's
- * nodes wholesale would cascade away every edge *other* runs had pointing into
- * them, and those runs will not be re-run. Instead: upsert the ids this batch
- * supplies, then delete the prior run — whose remaining nodes are exactly those
- * it no longer produces. Edges into a node that genuinely disappeared do cascade
- * away, and are reported as `orphanedEdges`, because keeping an edge to a node
- * that no longer exists is the wrong-edge failure the precision rule forbids.
+ * Batch writer (DEC-015). Prior runs matched on adapter id+repo (not full `producedBy` — §24.1 version bumps invalidate; DEC-228 multi-repo stores need `repo` or cross-repo files silently evict each other), by file-set *overlap* not equality (evicted files reported, principle 7).
+ * Run id is content-derived, so a same-commit re-run self-cleans what it stopped producing. Re-supplied nodes are upserted, not deleted+recreated (DEC-004 stable ids) — only genuinely-gone nodes cascade, reported as `orphanedEdges`.
  */
 import { createHash } from "node:crypto";
 import { canonicalJson, edgeId } from "@descryy/ir";
@@ -69,49 +13,30 @@ function splitProducer(producedBy) {
 function hash128(input) {
     return createHash("sha256").update(input, "utf8").digest("hex").slice(0, 32);
 }
-/**
- * A run id derived from the batch's content, never a counter.
- *
- * Re-ingesting an identical batch must land on the same row, or "idempotent"
- * cannot even be stated as a property. `sourceFiles` is sorted first so that an
- * adapter listing the same files in a different order does not create a second
- * run for identical work.
- */
+/** Run id derived from the batch's content, never a counter — re-ingesting an
+ *  identical batch must land on the same row. `sourceFiles` sorted first so
+ *  order doesn't create a second run for identical work. */
 export function runIdFor(batch) {
     return `r1:${hash128(canonicalJson([batch.producedBy, batch.repo, batch.commitSha, [...batch.sourceFiles].sort()]))}`;
 }
 function unresolvedId(ref) {
     return `u1:${hash128(canonicalJson([ref.fromNodeId, ref.edgeType, ref.rawTarget, ref.file, ref.line, ref.producedBy]))}`;
 }
-/**
- * **Delegates to `@descryy/ir`'s `edgeId()` — it must not re-derive this.**
- *
- * It used to, as a hand-rolled `` `e1:${hash128(...)}` ``, and that was a
- * latent identity split: DEC-054 moved the prefixes to `n2:`/`e2:` and this
- * copy was never moved with them, so `edgeId()` and the stored id agreed on
- * every byte of the hash and disagreed on the prefix. Nothing caught it
- * because `edgeId()` had zero callers — the first caller to look an edge up
- * by its public id would have silently matched nothing, which is DEC-055's
- * measured failure (16 joins to 0, no error anywhere) reproduced inside the
- * engine rather than across two adapters.
- *
- * One identity, one function. See DEC-NEXT-edge-id-prefix-split.
- */
+/** Delegates to `@descryy/ir`'s `edgeId()` — must never re-derive this. A
+ *  hand-rolled copy once drifted on the DEC-054 prefix bump (16 joins to 0,
+ *  DEC-055). One identity, one function (DEC-NEXT-edge-id-prefix-split). */
 function edgeRowId(edge) {
     return edgeId(edge.from, edge.to, edge.type);
 }
-/**
- * Write one normalised batch. **Input must already have passed the Normaliser** —
- * this function does no validation, on purpose. Two validators drift; one
- * validator at the boundary is a boundary.
- */
+/** Writes one normalised batch. Input must already have passed the Normaliser —
+ *  this does no validation, on purpose. Two validators drift. */
 export function writeBatch(driver, batch, options = {}) {
     const now = options.now ?? Date.now;
     const runId = runIdFor(batch);
     const { id: adapterId, version } = splitProducer(batch.producedBy);
     const incomingFiles = new Set(batch.sourceFiles);
     return driver.transaction(() => {
-        // --- find the prior runs this batch supersedes --------------------------
+        // Find the prior runs this batch supersedes.
         const priorRuns = driver
             .prepare("SELECT id, source_files FROM adapter_runs WHERE adapter_id = ? AND repo = ? AND id != ?")
             .all(adapterId, batch.repo, runId)
@@ -128,23 +53,17 @@ export function writeBatch(driver, batch, options = {}) {
         }
         const ownRunIds = [runId, ...priorRuns.map((r) => r.id)];
         const foreignEdgesBefore = countForeignEdges(driver, ownRunIds);
-        // A scratch list of what this batch supplies, so the self-clean below is a
-        // set difference rather than a `NOT IN (?, ?, ...)` with one parameter per
-        // row — which caps out at SQLITE_MAX_VARIABLE_NUMBER on a large batch.
+        // Scratch list of what this batch supplies, so self-clean is a set difference
+        // rather than a `NOT IN (?, ...)` that caps out on SQLITE_MAX_VARIABLE_NUMBER.
         driver.exec(`CREATE TEMP TABLE IF NOT EXISTS supplied (kind TEXT NOT NULL, id TEXT NOT NULL, PRIMARY KEY (kind, id))`);
         driver.exec("DELETE FROM temp.supplied");
         const remember = driver.prepare("INSERT OR IGNORE INTO temp.supplied (kind, id) VALUES (?, ?)");
-        // Rows owned by a run this write replaces are always overwritten, never
-        // merged. DEC-012 arbitrates between two *different* producers claiming the
-        // same thing; the same adapter re-running over the same files is
-        // invalidation, and the fresh reading wins even when it reached a lower
-        // resolution — stale R3 facts about code that has since changed are worse
-        // than accurate R1 ones. Without this, a degraded re-run would fail the
-        // merge test, leave the row owned by the prior run, and then lose it to that
-        // run's cascade a few statements later.
+        // Rows owned by a replaced run always overwrite, never merge (DEC-012 merge
+        // logic is for two *different* producers; same-adapter re-run is invalidation —
+        // the fresh reading wins even at lower resolution, since stale facts are worse).
         for (const run of priorRuns)
             remember.run("run", run.id);
-        // --- the run row, before anything references it -------------------------
+        // The run row, before anything references it.
         driver
             .prepare(`INSERT INTO adapter_runs
            (id, repo, workspace, commit_sha, adapter_id, adapter_version, produced_by,
@@ -157,12 +76,9 @@ export function writeBatch(driver, batch, options = {}) {
            reached_resolution = excluded.reached_resolution,
            written_at = excluded.written_at`)
             .run(runId, batch.repo, batch.workspace ?? null, batch.commitSha, adapterId, version, batch.producedBy, batch.reachedResolution, JSON.stringify([...batch.sourceFiles].sort()), batch.sourceFiles.length, now());
-        // ON CONFLICT DO UPDATE, never INSERT OR REPLACE. `REPLACE` is a DELETE
-        // followed by an INSERT, so with foreign keys on it would cascade away this
-        // run's own nodes and edges before re-inserting them — and because the run
-        // id is content-derived, re-ingesting an identical batch hits that path
-        // every single time.
-        // --- nodes: upsert first, so ids that survive keep their inbound edges ---
+        // ON CONFLICT DO UPDATE, never INSERT OR REPLACE — REPLACE is DELETE+INSERT
+        // and would cascade away this run's own nodes/edges via foreign keys.
+        // Nodes: upsert first, so surviving ids keep their inbound edges.
         const insertNode = driver.prepare(`INSERT INTO nodes
          (id, type, name, file_path, start_line, end_line, language, produced_by, resolution, attrs, run_id)
        VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
@@ -178,23 +94,20 @@ export function writeBatch(driver, batch, options = {}) {
             insertNode.run(node.id, node.type, node.name, node.file, node.range?.startLine ?? null, node.range?.endLine ?? null, node.language, node.producedBy, node.resolution, canonicalJson(node.attrs), runId);
             remember.run("node", node.id);
         }
-        // --- retire the prior runs ----------------------------------------------
-        // Everything still pointing at them is, by definition, what this batch no
-        // longer produces. The cascade removes it; the counts above and below say
-        // how much.
+        // Retire the prior runs — everything still pointing at them is what this
+        // batch no longer produces; the cascade removes it.
         if (priorRuns.length > 0) {
             const del = driver.prepare("DELETE FROM adapter_runs WHERE id = ?");
             for (const run of priorRuns)
                 del.run(run.id);
         }
-        // ...and after this run's own previous write. See note 3 above: an adapter
-        // re-run at the same commit reuses the run id, so this is the only thing
-        // that removes what it stopped producing.
+        // And after this run's own previous write — a same-commit re-run reuses the
+        // run id, so this is the only thing that removes what it stopped producing.
         driver
             .prepare(`DELETE FROM nodes WHERE run_id = ?
            AND id NOT IN (SELECT id FROM temp.supplied WHERE kind = 'node')`)
             .run(runId);
-        // --- edges and unresolved references -------------------------------------
+        // Edges and unresolved references.
         const insertEdge = driver.prepare(`INSERT INTO edges
          (id, source, target, type, resolution, confidence, produced_by, observed_by_run, attrs, run_id)
        VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
@@ -227,9 +140,7 @@ export function writeBatch(driver, batch, options = {}) {
             .prepare(`DELETE FROM unresolved_refs WHERE run_id = ?
            AND id NOT IN (SELECT id FROM temp.supplied WHERE kind = 'ref')`)
             .run(runId);
-        // Edges belonging to neither this run nor the runs it replaced can only have
-        // vanished by cascade — an endpoint node ceased to exist. Measured directly
-        // rather than inferred from a before/after total, which dedupe would skew.
+        // Foreign edges that vanished can only be cascade from a dead endpoint node.
         const orphaned = foreignEdgesBefore - countForeignEdges(driver, ownRunIds);
         return {
             runId,
@@ -249,14 +160,9 @@ function countForeignEdges(driver, ownRunIds) {
         .prepare(`SELECT COUNT(*) AS n FROM edges WHERE run_id NOT IN (${placeholders})`)
         .get(...ownRunIds)?.n ?? 0);
 }
-/**
- * Remove everything an adapter ever produced, at every version, for every repo.
- *
- * §24.1's invalidation rule, as its own operation rather than a side effect of
- * writing. It is deliberately separate from `writeBatch`: an upgraded adapter
- * usually re-runs over a subset of files first, and folding this into the write
- * path would make a partial re-run delete data it was never going to replace.
- */
+/** Removes everything an adapter ever produced, at every version, every repo
+ *  (§24.1). Kept separate from `writeBatch` — folding it in would make a
+ *  partial re-run delete data it was never going to replace. */
 export function invalidateAdapter(driver, adapterId) {
     return driver.transaction(() => {
         const result = driver.prepare("DELETE FROM adapter_runs WHERE adapter_id = ?").run(adapterId);

package/dist/store/writer.js.map

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