@datagrok/sequence-translator 1.6.2 → 1.6.3

package/package.json

@@ -1,7 +1,7 @@
 {
   "name": "@datagrok/sequence-translator",
   "friendlyName": "Sequence Translator",
-  "version": "1.6.2",
+  "version": "1.6.3",
   "author": {
     "name": "Leonid Stolbov",
     "email": "lstolbov@datagrok.ai"

package/src/package.ts

@@ -22,7 +22,6 @@ import {polyToolEnumerateHelmUI} from './polytool/pt-enumerate-seq-dialog';
 import {_setPeptideColumn} from './polytool/utils';
 import {PolyToolCsvLibHandler} from './polytool/csv-to-json-monomer-lib-converter';
 import {ITranslationHelper} from './types';
-import {addContextMenuUI} from './utils/context-menu';
 import {PolyToolConvertFuncEditor} from './polytool/pt-convert-editor';
 import {CyclizedNotationProvider} from './utils/cyclized';
 import {getSeqHelper} from '@datagrok-libraries/bio/src/utils/seq-helper';
@@ -248,14 +247,6 @@ export async function createMonomerLibraryForPolyTool(file: DG.FileInfo) {
   DG.Utils.download(jsonFileName, jsonFileContent);
 }
 
-// -- Handle context menu --
-
-//name: addContextMenu
-//input: object event
-export function addContextMenu(event: DG.EventData): void {
-  addContextMenuUI(event);
-}
-
 // //name: PolyTool Converter
 // //meta.icon: img/icons/structure.png
 // //meta.browsePath: PolyTool
@@ -298,6 +289,20 @@ export async function ptEnumeratorChemApp(): Promise<void> {
   polyToolEnumerateChemUI();
 }
 
+
+//name: Polytool Helm Enumerator dialog
+//input: object cell {nullable: true}
+export async function getPtHelmEnumeratorDialog(cell?: DG.Cell) {
+  return polyToolEnumerateHelmUI(cell);
+}
+
+//name: Polytool Chem Enumerator dialog
+//input: object cell {nullable: true}
+export async function getPtChemEnumeratorDialog(cell?: DG.Cell) {
+  return polyToolEnumerateChemUI(cell);
+}
+
+
 //name: applyNotationProviderForHarmonizedSequence
 //input: column col
 //input: string separator

package/src/utils/context-menu.ts

@@ -1,53 +0,0 @@
-import * as grok from 'datagrok-api/grok';
-import * as DG from 'datagrok-api/dg';
-import * as ui from 'datagrok-api/ui';
-
-import {defaultErrorHandler} from './err-info';
-import {polyToolEnumerateHelmUI} from '../polytool/pt-enumerate-seq-dialog';
-import {polyToolEnumerateChemUI} from '../polytool/pt-dialog';
-
-import {_package} from '../package';
-
-export type SequenceTranslatorWindowType = Window & {
-  $sequenceTranslator?: {
-    contextMenuError?: any
-  },
-};
-declare const window: SequenceTranslatorWindowType;
-
-export function addContextMenuUI(event: DG.EventData): void {
-  try {
-    const item = event.args.item;
-    if (item) {
-      const menu: DG.Menu = event.args.menu;
-      if (item instanceof DG.GridCell || item.constructor.name == 'GridCell') {
-        const gridCell: DG.GridCell = item;
-        if (addContextMenuForCell(gridCell, menu))
-          event.preventDefault();
-      }
-    }
-  } catch (err: any) {
-    defaultErrorHandler(err);
-    if (!window.$sequenceTranslator) window.$sequenceTranslator = {};
-    window.$sequenceTranslator.contextMenuError = err;
-  }
-}
-
-function addContextMenuForCell(gridCell: DG.GridCell, menu: DG.Menu): boolean {
-  const logPrefix: string = `ST: addContextMenuForCell()`;
-  _package.logger.debug(`${logPrefix}, start`);
-
-  if (gridCell && gridCell.tableColumn) {
-    switch (gridCell.tableColumn.semType) {
-    case DG.SEMTYPE.MACROMOLECULE: {
-      menu.item('PolyTool-Enumerate', () => { polyToolEnumerateHelmUI(gridCell.cell).then(() => {}); });
-      return true;
-    }
-    case DG.SEMTYPE.MOLECULE: {
-      menu.item('PolyTool-Enumerate', () => { polyToolEnumerateChemUI(gridCell.cell).then(() => {}); });
-      return true;
-    }
-    }
-  }
-  return false;
-}