@datagrok/sequence-translator 1.3.1 → 1.3.2

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Files changed (53) hide show
  1. package/.eslintrc.json +1 -1
  2. package/CHANGELOG.md +12 -0
  3. package/dist/package-test.js +1 -2
  4. package/dist/package-test.js.map +1 -1
  5. package/dist/package.js +1 -1
  6. package/dist/package.js.map +1 -1
  7. package/files/monomers-sample/README.md +12 -0
  8. package/files/samples/bulk-translation-axolabs.csv +6 -0
  9. package/files/tests/README.md +2 -0
  10. package/files/tests/axolabs1.csv +2 -0
  11. package/package.json +23 -13
  12. package/src/apps/common/model/data-loader/const.ts +1 -2
  13. package/src/apps/common/model/data-loader/json-loader.ts +22 -31
  14. package/src/apps/common/model/monomer-lib/lib-wrapper.ts +13 -19
  15. package/src/apps/common/model/oligo-toolkit-package.ts +80 -13
  16. package/src/apps/common/model/parsing-validation/format-detector.ts +9 -6
  17. package/src/apps/common/model/parsing-validation/format-handler.ts +16 -13
  18. package/src/apps/common/model/parsing-validation/sequence-validator.ts +8 -3
  19. package/src/apps/common/view/combined-app-ui.ts +12 -10
  20. package/src/apps/common/view/components/colored-input/input-painters.ts +4 -3
  21. package/src/apps/common/view/monomer-lib-viewer.ts +2 -1
  22. package/src/apps/common/view/utils.ts +5 -4
  23. package/src/apps/pattern/model/data-manager.ts +9 -6
  24. package/src/apps/pattern/model/translator.ts +8 -10
  25. package/src/apps/pattern/model/utils.ts +0 -1
  26. package/src/apps/pattern/view/components/strand-editor/strand-controls.ts +0 -1
  27. package/src/apps/pattern/view/components/translation-examples-block.ts +2 -1
  28. package/src/apps/pattern/view/svg-utils/utils.ts +6 -4
  29. package/src/apps/pattern/view/ui.ts +4 -1
  30. package/src/apps/structure/model/monomer-code-parser.ts +15 -5
  31. package/src/apps/structure/model/oligo-structure.ts +17 -16
  32. package/src/apps/structure/model/sequence-to-molfile.ts +2 -1
  33. package/src/apps/structure/view/ui.ts +19 -11
  34. package/src/apps/translator/model/conversion-utils.ts +16 -11
  35. package/src/apps/translator/model/format-converter.ts +15 -5
  36. package/src/apps/translator/view/ui.ts +32 -20
  37. package/src/demo/demo-st-ui.ts +2 -2
  38. package/src/package-test.ts +9 -2
  39. package/src/package.ts +18 -17
  40. package/src/plugins/mermade.ts +11 -8
  41. package/src/tests/const.ts +7 -5
  42. package/src/tests/files-tests.ts +75 -0
  43. package/src/tests/formats-support.ts +12 -11
  44. package/src/tests/formats-to-helm.ts +12 -19
  45. package/src/tests/helm-to-nucleotides.ts +12 -6
  46. package/src/tests/utils.ts +20 -0
  47. package/src/types.ts +18 -0
  48. package/dist/package-test.js.LICENSE.txt +0 -8
  49. /package/files/{codes-to-symbols.json → monomers-sample/codes-to-symbols.json} +0 -0
  50. /package/files/{formats-to-helm.json → monomers-sample/formats-to-helm.json} +0 -0
  51. /package/files/{linkers.json → monomers-sample/linkers.json} +0 -0
  52. /package/files/{monomer-lib.json → monomers-sample/monomer-lib.json} +0 -0
  53. /package/files/{pattern-app-data.json → monomers-sample/pattern-app-data.json} +0 -0
package/.eslintrc.json CHANGED
@@ -44,7 +44,7 @@
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  "block-spacing": [2, "always"],
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  "comma-dangle": ["error", {
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  "arrays": "only-multiline",
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- "functions": "never",
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+ "functions": "only-multiline",
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  "objects": "only-multiline",
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  "imports": "only-multiline"
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  }],
package/CHANGELOG.md CHANGED
@@ -1,5 +1,17 @@
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  # Sequence Translator changelog
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+ ## 1.3.2 (2024-06-10)
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+
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+ ### Features
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+
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+ * Add package MonomersPath package settings fallback to monomers-sample
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+ * Add README for monomers-sample
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+ * Add sample for bulk translation in Translator app
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+
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+ ### Bug fixes
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+
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+ * Fix tests for MonomersPath package settings
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+
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  ## 1.3.1 (2024-06-05)
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  ### Bug fixes