@datagrok/peptides 1.23.18 → 1.23.19
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/package-test.js +1 -1
- package/dist/package-test.js.map +1 -1
- package/dist/package.js +1 -1
- package/dist/package.js.map +1 -1
- package/package.json +8 -8
- package/src/package.g.ts +1 -1
- package/src/package.ts +1 -1
- package/src/viewers/cluster-max-activity-viewer.ts +1 -1
- package/src/viewers/sar-viewer.ts +1 -1
package/package.json
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@datagrok/peptides",
|
|
3
3
|
"friendlyName": "Peptides",
|
|
4
|
-
"version": "1.23.
|
|
4
|
+
"version": "1.23.19",
|
|
5
5
|
"author": {
|
|
6
6
|
"name": "Davit Rizhinashvili",
|
|
7
7
|
"email": "drizhinashvili@datagrok.ai"
|
|
@@ -13,12 +13,12 @@
|
|
|
13
13
|
"directory": "packages/Peptides"
|
|
14
14
|
},
|
|
15
15
|
"dependencies": {
|
|
16
|
-
"@datagrok-libraries/bio": "^5.
|
|
17
|
-
"@datagrok-libraries/math": "^1.2.
|
|
18
|
-
"@datagrok-libraries/ml": "^6.10.
|
|
16
|
+
"@datagrok-libraries/bio": "^5.55.1",
|
|
17
|
+
"@datagrok-libraries/math": "^1.2.6",
|
|
18
|
+
"@datagrok-libraries/ml": "^6.10.6",
|
|
19
19
|
"@datagrok-libraries/statistics": "^1.2.12",
|
|
20
|
-
"@datagrok-libraries/tutorials": "^1.
|
|
21
|
-
"@datagrok-libraries/utils": "^4.6.
|
|
20
|
+
"@datagrok-libraries/tutorials": "^1.7.4",
|
|
21
|
+
"@datagrok-libraries/utils": "^4.6.9",
|
|
22
22
|
"@webgpu/types": "^0.1.40",
|
|
23
23
|
"cash-dom": "^8.1.5",
|
|
24
24
|
"datagrok-api": "^1.25.0",
|
|
@@ -28,7 +28,7 @@
|
|
|
28
28
|
"wu": "^2.1.0"
|
|
29
29
|
},
|
|
30
30
|
"devDependencies": {
|
|
31
|
-
"@datagrok-libraries/helm-web-editor": "^1.1.
|
|
31
|
+
"@datagrok-libraries/helm-web-editor": "^1.1.16",
|
|
32
32
|
"@datagrok-libraries/js-draw-lite": "^0.0.5",
|
|
33
33
|
"@datagrok/bio": "^2.21.11",
|
|
34
34
|
"@datagrok/chem": "^1.13.0",
|
|
@@ -40,7 +40,7 @@
|
|
|
40
40
|
"@typescript-eslint/eslint-plugin": "^8.8.1",
|
|
41
41
|
"@typescript-eslint/parser": "^8.8.1",
|
|
42
42
|
"css-loader": "^7.1.2",
|
|
43
|
-
"datagrok-tools": "^4.14.
|
|
43
|
+
"datagrok-tools": "^4.14.65",
|
|
44
44
|
"eslint": "^8.57.1",
|
|
45
45
|
"eslint-config-google": "^0.14.0",
|
|
46
46
|
"style-loader": "^4.0.0",
|
package/src/package.g.ts
CHANGED
|
@@ -82,7 +82,7 @@ export function manualAlignment(_monomer: string) : any {
|
|
|
82
82
|
//name: Peptide SAR
|
|
83
83
|
//description: Peptide SAR Analysis demo on peptide sequences in FASTA format
|
|
84
84
|
//meta.demoPath: Bioinformatics | Peptide SAR
|
|
85
|
-
//meta.
|
|
85
|
+
//meta.isDemoDashboard: true
|
|
86
86
|
export async function macromoleculeSarFastaDemo() : Promise<void> {
|
|
87
87
|
await PackageFunctions.macromoleculeSarFastaDemo();
|
|
88
88
|
}
|
package/src/package.ts
CHANGED
|
@@ -250,7 +250,7 @@ export class PackageFunctions {
|
|
|
250
250
|
@grok.decorators.func({
|
|
251
251
|
meta: {
|
|
252
252
|
demoPath: 'Bioinformatics | Peptide SAR',
|
|
253
|
-
|
|
253
|
+
isDemoDashboard: 'true',
|
|
254
254
|
},
|
|
255
255
|
name: 'Peptide SAR',
|
|
256
256
|
description: 'Peptide SAR Analysis demo on peptide sequences in FASTA format',
|
|
@@ -66,7 +66,7 @@ export class ClusterMaxActivityViewer extends DG.JsViewer implements IClusterMax
|
|
|
66
66
|
'activityTarget', ACTIVITY_TARGET.HIGH, {choices: [ACTIVITY_TARGET.HIGH, ACTIVITY_TARGET.LOW]},
|
|
67
67
|
) as ACTIVITY_TARGET;
|
|
68
68
|
this.clusterSizeThreshold = this.int(ClusterMaxActivityProps.CLUSTER_SIZE_THRESHOLD, 20);
|
|
69
|
-
this.activityThreshold = this.
|
|
69
|
+
this.activityThreshold = this.float(ClusterMaxActivityProps.ACTIVITY_THRESHOLD, 1000, {step: 0.1});
|
|
70
70
|
this.connectivityColumnName = this.column(ClusterMaxActivityProps.CONNECTIVITY_COLUMN, {nullable: true});
|
|
71
71
|
}
|
|
72
72
|
|
|
@@ -1120,7 +1120,7 @@ export class MonomerPosition extends SARViewer {
|
|
|
1120
1120
|
$(expand).addClass('pep-help-icon');
|
|
1121
1121
|
this.targetColumnInput && (this.targetColumnInput.root.style.maxWidth = '50%');
|
|
1122
1122
|
this.monomerSearchInput.root.style.marginRight = '8px';
|
|
1123
|
-
const targetInputsHost = ui.divH([this.monomerSearchInput.
|
|
1123
|
+
const targetInputsHost = ui.divH([this.monomerSearchInput.input, this.targetColumnInput?.root ?? ui.div(), this.targetCategoryInput.root],
|
|
1124
1124
|
{style: {alignSelf: 'center', justifyContent: 'center', width: '100%', flexWrap: 'wrap'}});
|
|
1125
1125
|
targetInputsHost.style.display = this.showFilterControls ? 'flex' : 'none';
|
|
1126
1126
|
const header = ui.divH([expand, switchHost, targetInputsHost], {style: {alignSelf: 'center', lineHeight: 'normal', flexDirection: 'column', width: '100%'}});
|