@datagrok/peptides 0.8.8 → 0.8.12

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Files changed (42) hide show
  1. package/.eslintrc.json +2 -1
  2. package/dist/package-test.js +22626 -0
  3. package/dist/package.js +21429 -0
  4. package/dist/vendors-node_modules_datagrok-libraries_ml_src_workers_dimensionality-reducer_js.js +8840 -0
  5. package/jest.config.js +33 -0
  6. package/package.json +70 -62
  7. package/src/__jest__/remote.test.ts +50 -0
  8. package/src/__jest__/test-node.ts +96 -0
  9. package/src/model.ts +977 -92
  10. package/src/monomer-library.ts +18 -12
  11. package/src/package-test.ts +6 -5
  12. package/src/package.ts +83 -68
  13. package/src/peptides.ts +298 -142
  14. package/src/styles.css +8 -0
  15. package/src/tests/peptide-space-test.ts +1 -1
  16. package/src/tests/peptides-tests.ts +20 -81
  17. package/src/tests/utils.ts +4 -9
  18. package/src/utils/SAR-multiple-filter.ts +439 -0
  19. package/src/utils/SAR-multiple-selection.ts +177 -0
  20. package/src/utils/cell-renderer.ts +124 -97
  21. package/src/utils/chem-palette.ts +98 -166
  22. package/src/utils/constants.ts +56 -0
  23. package/src/utils/filtering-statistics.ts +62 -0
  24. package/src/utils/multiple-sequence-alignment.ts +33 -2
  25. package/src/utils/multivariate-analysis.ts +79 -0
  26. package/src/utils/peptide-similarity-space.ts +24 -53
  27. package/src/utils/types.ts +10 -0
  28. package/src/viewers/logo-viewer.ts +7 -5
  29. package/src/viewers/peptide-space-viewer.ts +121 -0
  30. package/src/viewers/sar-viewer.ts +118 -342
  31. package/src/viewers/stacked-barchart-viewer.ts +322 -369
  32. package/src/widgets/analyze-peptides.ts +50 -29
  33. package/src/widgets/distribution.ts +61 -0
  34. package/src/widgets/manual-alignment.ts +7 -4
  35. package/src/widgets/multiple-sequence-alignment.ts +9 -0
  36. package/src/widgets/peptide-molecule.ts +8 -6
  37. package/src/widgets/subst-table.ts +73 -0
  38. package/src/workers/dimensionality-reducer.ts +1 -1
  39. package/test-Peptides-414a1874a71a-2f1c6575.html +256 -0
  40. package/src/describe.ts +0 -535
  41. package/src/utils/split-aligned.ts +0 -72
  42. package/src/viewers/subst-viewer.ts +0 -285
package/.eslintrc.json CHANGED
@@ -34,6 +34,7 @@
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  "error",
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  "1tbs",
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  { "allowSingleLine": true }
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- ]
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+ ],
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+ "block-spacing": 2
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  }
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  }