@datagrok/peptides 0.8.7 → 0.8.10
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/package.json +10 -12
- package/setup.cmd +18 -0
- package/src/model.ts +568 -90
- package/src/monomer-library.ts +19 -14
- package/src/package-test.ts +4 -4
- package/src/package.ts +58 -35
- package/src/peptides.ts +225 -105
- package/src/tests/peptide-space-test.ts +1 -1
- package/src/tests/peptides-tests.ts +14 -75
- package/src/tests/utils.ts +3 -2
- package/src/utils/cell-renderer.ts +120 -72
- package/src/utils/chem-palette.ts +100 -163
- package/src/utils/multiple-sequence-alignment.ts +33 -2
- package/src/utils/multivariate-analysis.ts +77 -0
- package/src/utils/peptide-similarity-space.ts +18 -28
- package/src/viewers/logo-viewer.ts +5 -4
- package/src/viewers/sar-viewer.ts +89 -129
- package/src/viewers/stacked-barchart-viewer.ts +348 -359
- package/src/viewers/subst-viewer.ts +103 -70
- package/src/widgets/analyze-peptides.ts +43 -25
- package/src/widgets/manual-alignment.ts +6 -4
- package/src/widgets/multiple-sequence-alignment.ts +9 -0
- package/src/widgets/peptide-molecule.ts +8 -6
- package/src/widgets/subst-table.ts +63 -0
- package/src/workers/dimensionality-reducer.ts +1 -1
- package/src/describe.ts +0 -535
- package/src/utils/split-aligned.ts +0 -72
package/package.json
CHANGED
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@@ -1,6 +1,6 @@
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{
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"name": "@datagrok/peptides",
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"version": "0.8.
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"version": "0.8.10",
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"description": "",
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"dependencies": {
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"@biowasm/aioli": ">=2.4.0",
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@@ -8,11 +8,9 @@
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"@datagrok-libraries/ml": ">=0.0.14",
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"@datagrok-libraries/statistics": ">=0.1.5",
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"@datagrok-libraries/utils": ">=0.0.22",
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"@types/d3": "^7.0.0",
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"@types/jquery": "^3.5.6",
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"cash-dom": "latest",
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"d3": "latest",
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"datagrok-api": ">=0.
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"datagrok-api": ">=0.123.0",
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"dayjs": "latest",
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"file-loader": "^6.2.0",
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"jstat": "^1.9.5",
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@@ -20,20 +18,20 @@
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"rxjs": "^6.5.5"
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},
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"devDependencies": {
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"@
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"@
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"@types/d3": "^7.0.0",
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"@types/jquery": "^3.5.6",
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"@typescript-eslint/eslint-plugin": "latest",
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"@typescript-eslint/parser": "latest",
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"css-loader": "^5.2.4",
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"eslint": "
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"eslint-config-google": "
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"eslint": "latest",
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"eslint-config-google": "latest",
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"style-loader": "^2.0.0",
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"ts-loader": "
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"typescript": "
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"ts-loader": "latest",
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"typescript": "latest",
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"webpack": "latest",
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"webpack-cli": "latest"
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},
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"sources": [
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"files/aligned.csv",
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"files/aligned_2.csv",
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"common/ngl_viewer/ngl.js"
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],
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"scripts": {
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package/setup.cmd
ADDED
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@@ -0,0 +1,18 @@
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call npm unlink datagrok-api
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call npm unlink @datagrok-libraries/utils
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call npm unlink @datagrok-libraries/ml
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cd ../../js-api
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call npm install
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call npm link
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cd ../libraries/utils
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call npm install
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call npm link
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call npm link datagrok-api
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cd ../../libraries/ml
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call npm install
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call npm link
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call npm link @datagrok-libraries/utils
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cd ../../packages/Peptides
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call npm install
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call npm link datagrok-api @datagrok-libraries/utils @datagrok-libraries/ml
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webpack
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